ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags4n05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_479385.1| Oryza sativa (japonica cultivar-group), mRNA 389 e-105
2dbj|AK073258.1| Oryza sativa (japonica cultivar-group) cDNA clon... 389 e-105
3gb|AY104286.1| Zea mays PCO106936 mRNA sequence 375 e-101
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 287 1e-74
5dbj|AP005182.5| Oryza sativa (japonica cultivar-group) genomic D... 287 1e-74
6gb|BT019317.1| Zea mays clone Contig1000.F mRNA sequence 165 1e-37
7ref|NM_111494.2| Arabidopsis thaliana ATBPM2; protein binding AT... 50 0.005
8gb|AC018907.5|ATAC018907 Arabidopsis thaliana chromosome III BAC... 50 0.005
9gb|AY091449.1| Arabidopsis thaliana unknown protein (At3g06190) ... 50 0.005
10gb|AY045891.1| Arabidopsis thaliana unknown protein (At3g06190) ... 50 0.005
11emb|BX823689.1|CNS0A7FE Arabidopsis thaliana Full-length cDNA Co... 50 0.005
12ref|NM_121905.2| Arabidopsis thaliana ATBPM1; protein binding AT... 48 0.021
13gb|AY136451.1| Arabidopsis thaliana putative protein (At5g19000)... 48 0.021
14emb|BX831774.1|CNS09ZOW Arabidopsis thaliana Full-length cDNA Co... 48 0.021
15gb|BT002593.1| Arabidopsis thaliana putative protein (At5g19000)... 48 0.021
16gb|AC068809.1|AC068809 Genomic Sequence For Arabidopsis thaliana... 48 0.021
17ref|NM_196581.1| Oryza sativa (japonica cultivar-group) putative... 46 0.082
18gb|AC073392.3| Oryza sativa (japonica cultivar-group) chromosome... 46 0.082
19dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.082
20dbj|AK107342.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.082
21gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 46 0.082
22ref|NM_202507.1| Arabidopsis thaliana ATBPM2; protein binding AT... 44 0.32
23gb|BT013834.1| Lycopersicon esculentum clone 132791R, mRNA sequence 44 0.32
24gb|AC134341.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.3
25gb|AC124144.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.3
26gb|AC132277.3| Mus musculus BAC clone RP24-344C7 from chromosome... 42 1.3
27emb|AL133465.30| Human DNA sequence from clone RP5-1177M21 on ch... 42 1.3
28emb|AL807759.15| Mouse DNA sequence from clone RP23-373H1 on chr... 42 1.3
29dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
30gb|AC018474.31| Homo sapiens 12 BAC RP11-757E18 (Roswell Park Ca... 42 1.3
31ref|NM_196578.1| Oryza sativa (japonica cultivar-group) putative... 40 5.1
32gb|AC129083.4| Mus musculus chromosome 6 clone RP23-9E15, comple... 40 5.1
33gb|AC112260.6| Mus musculus BAC clone RP23-185L5 from chromosome... 40 5.1
34gb|AC034148.9| Homo sapiens BAC clone RP11-155B1 from 7, complet... 40 5.1
35gb|AC124450.3| Mus musculus BAC clone RP24-215C4 from chromosome... 40 5.1
36gb|AC123954.4| Mus musculus BAC clone RP23-249L6 from 13, comple... 40 5.1
37gb|AC119831.6| Mus musculus chromosome 9, clone RP23-281F13, com... 40 5.1
38emb|AL035071.17|HS1085F17 Human DNA sequence from clone RP5-1085... 40 5.1
39gb|AC139238.5| Mus musculus BAC clone RP24-403G3 from chromosome... 40 5.1
40gb|BC045557.1| Homo sapiens chromosome 16 open reading frame 52,... 40 5.1
41gb|AC161417.5| Mus musculus BAC clone RP23-325H23 from chromosom... 40 5.1
42dbj|AK095585.1| Homo sapiens cDNA FLJ38266 fis, clone FCBBF3001890 40 5.1
43dbj|AK001191.1| Homo sapiens cDNA FLJ10329 fis, clone NT2RM20005... 40 5.1
44gb|AC096621.9| Mus musculus clone ct7-257p24, complete sequence 40 5.1
45ref|NM_006892.3| Homo sapiens DNA (cytosine-5-)-methyltransferas... 40 5.1
46ref|NM_175848.1| Homo sapiens DNA (cytosine-5-)-methyltransferas... 40 5.1
47ref|NM_175850.1| Homo sapiens DNA (cytosine-5-)-methyltransferas... 40 5.1
48ref|NM_175849.1| Homo sapiens DNA (cytosine-5-)-methyltransferas... 40 5.1
49gb|AF331857.1|AF331857 Homo sapiens DNA cytosine methyltransfera... 40 5.1
50gb|AC154409.2| Mus musculus BAC clone RP24-259B4 from chromosome... 40 5.1
51gb|AC009019.10| Homo sapiens chromosome 16 clone RP11-101E7, com... 40 5.1
52emb|CT025569.14| Mouse DNA sequence from clone RP24-68J22 on chr... 40 5.1
53gb|AF176228.1|AF176228 Homo sapiens DNA cytosine-5 methyltransfe... 40 5.1
54gb|AF156488.1|AF156488 Homo sapiens DNA cytosine-5 methyltransfe... 40 5.1
55gb|AF156487.1|AF156487 Homo sapiens DNA cytosine-5 methyltransfe... 40 5.1
56gb|DQ321787.1| Homo sapiens DNA methyltransferase (DNMT3B) mRNA,... 40 5.1
57gb|AC148983.2| Mus musculus BAC clone RP23-189G7 from 18, comple... 40 5.1
58dbj|AB208880.1| Homo sapiens mRNA for DNA cytosine-5 methyltrans... 40 5.1
59emb|AL672082.15| Mouse DNA sequence from clone RP23-67B21 on chr... 40 5.1
60emb|AL513468.9| Mouse DNA sequence from clone RP23-104I6 on chro... 40 5.1 
>ref|XM_479385.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1768

 Score =  389 bits (196), Expect = e-105
 Identities = 332/376 (88%), Gaps = 1/376 (0%)
 Strand = Plus / Plus

                                                                        
Query: 5    cctgctcacaaggtgattcttgcagcccgatcaccagtttttagggcacaactctttggt 64
            ||||||||||||||  ||||||||||||| ||||||||||| |||||||| || || |||
Sbjct: 998  cctgctcacaaggttgttcttgcagcccggtcaccagttttcagggcacagcttttcggt 1057

                                                                        
Query: 65   cccatgaaggataaaaacatgaagtgcataaagattgaagacatggaggctccagtattc 124
            || ||||||||||||||||||||| | |||| |||||| || ||||||||| |||| || 
Sbjct: 1058 ccaatgaaggataaaaacatgaagcgtataacgattgaggatatggaggcttcagttttt 1117

                                                                        
Query: 125  aagggccttgctccattttatgtactgggatgaattgcccaatatagaagagcttactgg 184
            |||| |||| ||||||||||||||||||||||| |||||  |||| ||||||||||||||
Sbjct: 1118 aagg-ccttactccattttatgtactgggatgagttgcctgatatcgaagagcttactgg 1176

                                                                        
Query: 185  tctaaatacgacttgggtttccactttgatggctcagcatttgcttgcagctgctgaccg 244
             |||||||| |||||||| ||||||||||||||||||||||| ||||||||||| || ||
Sbjct: 1177 cctaaatacaacttgggtatccactttgatggctcagcatttacttgcagctgcggatcg 1236

                                                                        
Query: 245  gtatgcattggagagactaaagctgctttctgaactcaagctatgtgaagacgttgcgat 304
             ||||||||||||||||||||| |||| | ||| |||||||| |||||||| ||||| ||
Sbjct: 1237 ttatgcattggagagactaaagttgctctgtgagctcaagctttgtgaagatgttgcaat 1296

                                                                        
Query: 305  aaacacagttgcaaatactttggcgctggctgaacagcaccattgccaccagctaaaaac 364
            ||||||||||||||| |||||||| ||||||||||||||||| ||  | |||||||||||
Sbjct: 1297 aaacacagttgcaaacactttggcactggctgaacagcaccactgttatcagctaaaaac 1356

                            
Query: 365  tgtttgcttgaaattt 380
            ||||||| ||| ||||
Sbjct: 1357 tgtttgcctgagattt 1372
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>dbj|AK073258.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024L05, full
            insert sequence
          Length = 1768

 Score =  389 bits (196), Expect = e-105
 Identities = 332/376 (88%), Gaps = 1/376 (0%)
 Strand = Plus / Plus

                                                                        
Query: 5    cctgctcacaaggtgattcttgcagcccgatcaccagtttttagggcacaactctttggt 64
            ||||||||||||||  ||||||||||||| ||||||||||| |||||||| || || |||
Sbjct: 998  cctgctcacaaggttgttcttgcagcccggtcaccagttttcagggcacagcttttcggt 1057

                                                                        
Query: 65   cccatgaaggataaaaacatgaagtgcataaagattgaagacatggaggctccagtattc 124
            || ||||||||||||||||||||| | |||| |||||| || ||||||||| |||| || 
Sbjct: 1058 ccaatgaaggataaaaacatgaagcgtataacgattgaggatatggaggcttcagttttt 1117

                                                                        
Query: 125  aagggccttgctccattttatgtactgggatgaattgcccaatatagaagagcttactgg 184
            |||| |||| ||||||||||||||||||||||| |||||  |||| ||||||||||||||
Sbjct: 1118 aagg-ccttactccattttatgtactgggatgagttgcctgatatcgaagagcttactgg 1176

                                                                        
Query: 185  tctaaatacgacttgggtttccactttgatggctcagcatttgcttgcagctgctgaccg 244
             |||||||| |||||||| ||||||||||||||||||||||| ||||||||||| || ||
Sbjct: 1177 cctaaatacaacttgggtatccactttgatggctcagcatttacttgcagctgcggatcg 1236

                                                                        
Query: 245  gtatgcattggagagactaaagctgctttctgaactcaagctatgtgaagacgttgcgat 304
             ||||||||||||||||||||| |||| | ||| |||||||| |||||||| ||||| ||
Sbjct: 1237 ttatgcattggagagactaaagttgctctgtgagctcaagctttgtgaagatgttgcaat 1296

                                                                        
Query: 305  aaacacagttgcaaatactttggcgctggctgaacagcaccattgccaccagctaaaaac 364
            ||||||||||||||| |||||||| ||||||||||||||||| ||  | |||||||||||
Sbjct: 1297 aaacacagttgcaaacactttggcactggctgaacagcaccactgttatcagctaaaaac 1356

                            
Query: 365  tgtttgcttgaaattt 380
            ||||||| ||| ||||
Sbjct: 1357 tgtttgcctgagattt 1372
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>gb|AY104286.1| Zea mays PCO106936 mRNA sequence
          Length = 1115

 Score =  375 bits (189), Expect = e-101
 Identities = 333/380 (87%), Gaps = 1/380 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtttcctgctcacaaggtgattcttgcagcccgatcaccagtttttagggcacaactctt 60
           ||||||||| ||||||||||||||| ||||||| || || ||||||||||||||||| ||
Sbjct: 227 gtttcctgcccacaaggtgattctttcagcccggtctcctgtttttagggcacaactttt 286

                                                                       
Query: 61  tggtcccatgaaggataaaaacatgaagtgcataaagattgaagacatggaggctccagt 120
           ||| || |||||||||||  |||||||||| |||||||||||||||||||||||||||||
Sbjct: 287 tggcccaatgaaggataaggacatgaagtgtataaagattgaagacatggaggctccagt 346

                                                                       
Query: 121 attcaagggccttgctccattttatgtactgggatgaattgcccaatatagaagagctta 180
           |||||||| ||||||||||||| ||||| |||||||| |||||  |||| ||||||||||
Sbjct: 347 attcaagg-ccttgctccatttcatgtattgggatgagttgccggatattgaagagctta 405

                                                                       
Query: 181 ctggtctaaatacgacttgggtttccactttgatggctcagcatttgcttgcagctgctg 240
           ||||| ||||||| |||||||| ||||| ||||||||||| ||||| || || ||||| |
Sbjct: 406 ctggtgtaaatacaacttgggtatccaccttgatggctcaacatttactagctgctgcag 465

                                                                       
Query: 241 accggtatgcattggagagactaaagctgctttctgaactcaagctatgtgaagacgttg 300
           |||| ||||||||||||||| | ||  |||| | |||||| ||||| |||||||| ||||
Sbjct: 466 accgttatgcattggagagattgaaattgctctgtgaacttaagctgtgtgaagatgttg 525

                                                                       
Query: 301 cgataaacacagttgcaaatactttggcgctggctgaacagcaccattgccaccagctaa 360
           | ||||| ||||| |||||||||||||| ||||||||||||||||| ||  |   |||||
Sbjct: 526 caataaatacagtggcaaatactttggcactggctgaacagcaccactgttatnggctaa 585

                               
Query: 361 aaactgtttgcttgaaattt 380
           ||||||||||||||||||||
Sbjct: 586 aaactgtttgcttgaaattt 605
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  287 bits (145), Expect = 1e-74
 Identities = 226/253 (89%)
 Strand = Plus / Plus

                                                                            
Query: 128      ggccttgctccattttatgtactgggatgaattgcccaatatagaagagcttactggtct 187
                |||||| ||||||||||||||||||||||| |||||  |||| |||||||||||||| ||
Sbjct: 27494974 ggccttactccattttatgtactgggatgagttgcctgatatcgaagagcttactggcct 27495033

                                                                            
Query: 188      aaatacgacttgggtttccactttgatggctcagcatttgcttgcagctgctgaccggta 247
                |||||| |||||||| ||||||||||||||||||||||| ||||||||||| || || ||
Sbjct: 27495034 aaatacaacttgggtatccactttgatggctcagcatttacttgcagctgcggatcgtta 27495093

                                                                            
Query: 248      tgcattggagagactaaagctgctttctgaactcaagctatgtgaagacgttgcgataaa 307
                ||||||||||||||||||| |||| | ||| |||||||| |||||||| ||||| |||||
Sbjct: 27495094 tgcattggagagactaaagttgctctgtgagctcaagctttgtgaagatgttgcaataaa 27495153

                                                                            
Query: 308      cacagttgcaaatactttggcgctggctgaacagcaccattgccaccagctaaaaactgt 367
                |||||||||||| |||||||| ||||||||||||||||| ||  | ||||||||||||||
Sbjct: 27495154 cacagttgcaaacactttggcactggctgaacagcaccactgttatcagctaaaaactgt 27495213

                             
Query: 368      ttgcttgaaattt 380
                |||| ||| ||||
Sbjct: 27495214 ttgcctgagattt 27495226



 Score =  119 bits (60), Expect = 7e-24
 Identities = 102/116 (87%)
 Strand = Plus / Plus

                                                                            
Query: 5        cctgctcacaaggtgattcttgcagcccgatcaccagtttttagggcacaactctttggt 64
                ||||||||||||||  ||||||||||||| ||||||||||| |||||||| || || |||
Sbjct: 27494308 cctgctcacaaggttgttcttgcagcccggtcaccagttttcagggcacagcttttcggt 27494367

                                                                        
Query: 65       cccatgaaggataaaaacatgaagtgcataaagattgaagacatggaggctccagt 120
                || ||||||||||||||||||||| | |||| |||||| || ||||||||| ||||
Sbjct: 27494368 ccaatgaaggataaaaacatgaagcgtataacgattgaggatatggaggcttcagt 27494423
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>dbj|AP005182.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0018C07
          Length = 141707

 Score =  287 bits (145), Expect = 1e-74
 Identities = 226/253 (89%)
 Strand = Plus / Plus

                                                                         
Query: 128   ggccttgctccattttatgtactgggatgaattgcccaatatagaagagcttactggtct 187
             |||||| ||||||||||||||||||||||| |||||  |||| |||||||||||||| ||
Sbjct: 58945 ggccttactccattttatgtactgggatgagttgcctgatatcgaagagcttactggcct 59004

                                                                         
Query: 188   aaatacgacttgggtttccactttgatggctcagcatttgcttgcagctgctgaccggta 247
             |||||| |||||||| ||||||||||||||||||||||| ||||||||||| || || ||
Sbjct: 59005 aaatacaacttgggtatccactttgatggctcagcatttacttgcagctgcggatcgtta 59064

                                                                         
Query: 248   tgcattggagagactaaagctgctttctgaactcaagctatgtgaagacgttgcgataaa 307
             ||||||||||||||||||| |||| | ||| |||||||| |||||||| ||||| |||||
Sbjct: 59065 tgcattggagagactaaagttgctctgtgagctcaagctttgtgaagatgttgcaataaa 59124

                                                                         
Query: 308   cacagttgcaaatactttggcgctggctgaacagcaccattgccaccagctaaaaactgt 367
             |||||||||||| |||||||| ||||||||||||||||| ||  | ||||||||||||||
Sbjct: 59125 cacagttgcaaacactttggcactggctgaacagcaccactgttatcagctaaaaactgt 59184

                          
Query: 368   ttgcttgaaattt 380
             |||| ||| ||||
Sbjct: 59185 ttgcctgagattt 59197



 Score =  119 bits (60), Expect = 7e-24
 Identities = 102/116 (87%)
 Strand = Plus / Plus

                                                                         
Query: 5     cctgctcacaaggtgattcttgcagcccgatcaccagtttttagggcacaactctttggt 64
             ||||||||||||||  ||||||||||||| ||||||||||| |||||||| || || |||
Sbjct: 58279 cctgctcacaaggttgttcttgcagcccggtcaccagttttcagggcacagcttttcggt 58338

                                                                     
Query: 65    cccatgaaggataaaaacatgaagtgcataaagattgaagacatggaggctccagt 120
             || ||||||||||||||||||||| | |||| |||||| || ||||||||| ||||
Sbjct: 58339 ccaatgaaggataaaaacatgaagcgtataacgattgaggatatggaggcttcagt 58394
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>gb|BT019317.1| Zea mays clone Contig1000.F mRNA sequence
          Length = 626

 Score =  165 bits (83), Expect = 1e-37
 Identities = 131/147 (89%)
 Strand = Plus / Plus

                                                                       
Query: 234 gctgctgaccggtatgcattggagagactaaagctgctttctgaactcaagctatgtgaa 293
           ||||| ||||| ||||||||||||||| ||||| |||| | |||||| ||||| ||||||
Sbjct: 11  gctgcagaccgttatgcattggagagattaaagttgctctgtgaacttaagctgtgtgaa 70

                                                                       
Query: 294 gacgttgcgataaacacagttgcaaatactttggcgctggctgaacagcaccattgccac 353
           || ||||| ||||||||||| |||||||||||||| ||||||||||||||||| ||| | 
Sbjct: 71  gatgttgcaataaacacagtggcaaatactttggcactggctgaacagcaccactgctat 130

                                      
Query: 354 cagctaaaaactgtttgcttgaaattt 380
           |||||||||||||||||||| ||||||
Sbjct: 131 cagctaaaaactgtttgcttaaaattt 157
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>ref|NM_111494.2| Arabidopsis thaliana ATBPM2; protein binding AT3G06190 (ATBPM2)
            transcript variant AT3G06190.1 mRNA, complete cds
          Length = 1845

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                 
Query: 214  tggctcagcatttgcttgcagctgctgaccggtatgc 250
            ||||||||||| ||||||||||||| ||||| |||||
Sbjct: 1186 tggctcagcatctgcttgcagctgcagaccgttatgc 1222



 Score = 44.1 bits (22), Expect = 0.32
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                        
Query: 2    tttcctgctcacaaggtgattcttgcagcccgatcaccagtttttagggcacaactcttt 61
            ||||||||||||||  || |||||||||| || ||  ||||||| |||||||| || |||
Sbjct: 975  tttcctgctcacaaattggttcttgcagcacgttctgcagttttcagggcacagcttttt 1034

              
Query: 62   gg 63
            ||
Sbjct: 1035 gg 1036



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 132  ttgctccattttatgtactgggatgaattgcc 163
            ||||| |||||||| |||||||||||| ||||
Sbjct: 1104 ttgcttcattttatctactgggatgaaatgcc 1135
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>gb|AC018907.5|ATAC018907 Arabidopsis thaliana chromosome III BAC F28L1 genomic sequence,
             complete sequence
          Length = 93478

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                  
Query: 214   tggctcagcatttgcttgcagctgctgaccggtatgc 250
             ||||||||||| ||||||||||||| ||||| |||||
Sbjct: 41240 tggctcagcatctgcttgcagctgcagaccgttatgc 41204



 Score = 44.1 bits (22), Expect = 0.32
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                         
Query: 2     tttcctgctcacaaggtgattcttgcagcccgatcaccagtttttagggcacaactcttt 61
             ||||||||||||||  || |||||||||| || ||  ||||||| |||||||| || |||
Sbjct: 41971 tttcctgctcacaaattggttcttgcagcacgttctgcagttttcagggcacagcttttt 41912

               
Query: 62    gg 63
             ||
Sbjct: 41911 gg 41910



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 132   ttgctccattttatgtactgggatgaattgcc 163
             ||||| |||||||| |||||||||||| ||||
Sbjct: 41322 ttgcttcattttatctactgggatgaaatgcc 41291
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>gb|AY091449.1| Arabidopsis thaliana unknown protein (At3g06190) mRNA, complete cds
          Length = 1252

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                
Query: 214 tggctcagcatttgcttgcagctgctgaccggtatgc 250
           ||||||||||| ||||||||||||| ||||| |||||
Sbjct: 848 tggctcagcatctgcttgcagctgcagaccgttatgc 884



 Score = 44.1 bits (22), Expect = 0.32
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                       
Query: 2   tttcctgctcacaaggtgattcttgcagcccgatcaccagtttttagggcacaactcttt 61
           ||||||||||||||  || |||||||||| || ||  ||||||| |||||||| || |||
Sbjct: 637 tttcctgctcacaaattggttcttgcagcacgttctgcagttttcagggcacagcttttt 696

             
Query: 62  gg 63
           ||
Sbjct: 697 gg 698



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 132 ttgctccattttatgtactgggatgaattgcc 163
           ||||| |||||||| |||||||||||| ||||
Sbjct: 766 ttgcttcattttatctactgggatgaaatgcc 797
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>gb|AY045891.1| Arabidopsis thaliana unknown protein (At3g06190) mRNA, complete cds
          Length = 1834

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                 
Query: 214  tggctcagcatttgcttgcagctgctgaccggtatgc 250
            ||||||||||| ||||||||||||| ||||| |||||
Sbjct: 1188 tggctcagcatctgcttgcagctgcagaccgttatgc 1224



 Score = 44.1 bits (22), Expect = 0.32
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                        
Query: 2    tttcctgctcacaaggtgattcttgcagcccgatcaccagtttttagggcacaactcttt 61
            ||||||||||||||  || |||||||||| || ||  ||||||| |||||||| || |||
Sbjct: 977  tttcctgctcacaaattggttcttgcagcacgttctgcagttttcagggcacagcttttt 1036

              
Query: 62   gg 63
            ||
Sbjct: 1037 gg 1038



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 132  ttgctccattttatgtactgggatgaattgcc 163
            ||||| |||||||| |||||||||||| ||||
Sbjct: 1106 ttgcttcattttatctactgggatgaaatgcc 1137
to top
>emb|BX823689.1|CNS0A7FE Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS67ZE02 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1675

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                 
Query: 214  tggctcagcatttgcttgcagctgctgaccggtatgc 250
            ||||||||||| ||||||||||||| ||||| |||||
Sbjct: 1167 tggctcagcatctgcttgcagctgcagaccgttatgc 1203



 Score = 44.1 bits (22), Expect = 0.32
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                        
Query: 2    tttcctgctcacaaggtgattcttgcagcccgatcaccagtttttagggcacaactcttt 61
            ||||||||||||||  || |||||||||| || ||  ||||||| |||||||| || |||
Sbjct: 956  tttcctgctcacaaattggttcttgcagcacgttctgcagttttcagggcacagcttttt 1015

              
Query: 62   gg 63
            ||
Sbjct: 1016 gg 1017



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 132  ttgctccattttatgtactgggatgaattgcc 163
            ||||| |||||||| |||||||||||| ||||
Sbjct: 1085 ttgcttcattttatctactgggatgaaatgcc 1116
to top
>ref|NM_121905.2| Arabidopsis thaliana ATBPM1; protein binding AT5G19000 (ATBPM1) mRNA,
            complete cds
          Length = 1673

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                            
Query: 132  ttgctccattttatgtactgggatgaattgcc 163
            |||||||||||||| |||||||| ||||||||
Sbjct: 1065 ttgctccattttatctactgggacgaattgcc 1096
to top
>gb|AY136451.1| Arabidopsis thaliana putative protein (At5g19000) mRNA, complete cds
          Length = 1661

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                            
Query: 132  ttgctccattttatgtactgggatgaattgcc 163
            |||||||||||||| |||||||| ||||||||
Sbjct: 1065 ttgctccattttatctactgggacgaattgcc 1096
to top
>emb|BX831774.1|CNS09ZOW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH29ZB02 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1572

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                            
Query: 132  ttgctccattttatgtactgggatgaattgcc 163
            |||||||||||||| |||||||| ||||||||
Sbjct: 1013 ttgctccattttatctactgggacgaattgcc 1044
to top
>gb|BT002593.1| Arabidopsis thaliana putative protein (At5g19000) mRNA, complete
           cds
          Length = 1335

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 132 ttgctccattttatgtactgggatgaattgcc 163
           |||||||||||||| |||||||| ||||||||
Sbjct: 769 ttgctccattttatctactgggacgaattgcc 800
to top
>gb|AC068809.1|AC068809 Genomic Sequence For Arabidopsis thaliana Clone T16G12 From Chromosome
             V, complete sequence
          Length = 82411

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 132   ttgctccattttatgtactgggatgaattgcc 163
             |||||||||||||| |||||||| ||||||||
Sbjct: 11078 ttgctccattttatctactgggacgaattgcc 11109
to top
>ref|NM_196581.1| Oryza sativa (japonica cultivar-group) putative speckle-type
           protein (OSJNBa0072A12.20), mRNA
          Length = 1089

 Score = 46.1 bits (23), Expect = 0.082
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 213 atggctcagcatttgcttgcagctgctgaccggta 247
           ||||||||||||||||||| ||| |||||| ||||
Sbjct: 808 atggctcagcatttgcttgtagcggctgacaggta 842
to top
>gb|AC073392.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0072A12,
             complete sequence
          Length = 149347

 Score = 46.1 bits (23), Expect = 0.082
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 213   atggctcagcatttgcttgcagctgctgaccggta 247
             ||||||||||||||||||| ||| |||||| ||||
Sbjct: 97782 atggctcagcatttgcttgtagcggctgacaggta 97816



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 213   atggctcagcatttgcttgcagctgctgaccggtat 248
             |||||||||||||||||||  || |||||| |||||
Sbjct: 83468 atggctcagcatttgcttgtcgcggctgacaggtat 83503
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 46.1 bits (23), Expect = 0.082
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                   
Query: 213      atggctcagcatttgcttgcagctgctgaccggta 247
                ||||||||||||||||||| ||| |||||| ||||
Sbjct: 14625320 atggctcagcatttgcttgtagcggctgacaggta 14625354



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                    
Query: 213      atggctcagcatttgcttgcagctgctgaccggtat 248
                |||||||||||||||||||  || |||||| |||||
Sbjct: 14611006 atggctcagcatttgcttgtcgcggctgacaggtat 14611041
to top
>dbj|AK107342.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-126-G04, full
           insert sequence
          Length = 1435

 Score = 46.1 bits (23), Expect = 0.082
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 213 atggctcagcatttgcttgcagctgctgaccggta 247
           ||||||||||||||||||| ||| |||||| ||||
Sbjct: 822 atggctcagcatttgcttgtagcggctgacaggta 856
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 46.1 bits (23), Expect = 0.082
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                   
Query: 213      atggctcagcatttgcttgcagctgctgaccggta 247
                ||||||||||||||||||| ||| |||||| ||||
Sbjct: 14633561 atggctcagcatttgcttgtagcggctgacaggta 14633595



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                    
Query: 213      atggctcagcatttgcttgcagctgctgaccggtat 248
                |||||||||||||||||||  || |||||| |||||
Sbjct: 14619247 atggctcagcatttgcttgtcgcggctgacaggtat 14619282
to top
>ref|NM_202507.1| Arabidopsis thaliana ATBPM2; protein binding AT3G06190 (ATBPM2)
            transcript variant AT3G06190.2 mRNA, complete cds
          Length = 1512

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                        
Query: 2    tttcctgctcacaaggtgattcttgcagcccgatcaccagtttttagggcacaactcttt 61
            ||||||||||||||  || |||||||||| || ||  ||||||| |||||||| || |||
Sbjct: 975  tttcctgctcacaaattggttcttgcagcacgttctgcagttttcagggcacagcttttt 1034

              
Query: 62   gg 63
            ||
Sbjct: 1035 gg 1036
to top
>gb|BT013834.1| Lycopersicon esculentum clone 132791R, mRNA sequence
          Length = 1935

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                      
Query: 208  ctttgatggctcagcatttgcttgcagctgctgaccggtatg 249
            |||| |||||||||||| ||||||| || ||||||| |||||
Sbjct: 1167 ctttaatggctcagcatctgcttgcggcagctgaccagtatg 1208



 Score = 44.1 bits (22), Expect = 0.32
 Identities = 58/70 (82%)
 Strand = Plus / Plus

                                                                        
Query: 6    ctgctcacaaggtgattcttgcagcccgatcaccagtttttagggcacaactctttggtc 65
            |||| |||||| || ||||||| ||||| || || ||  || ||||||||||||||||||
Sbjct: 966  ctgcacacaagttggttcttgctgcccgctcccctgtgcttcgggcacaactctttggtc 1025

                      
Query: 66   ccatgaagga 75
            |  |||||||
Sbjct: 1026 cattgaagga 1035
to top
>gb|AC134341.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0027N19, complete sequence
          Length = 141368

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 245   gtatgcattggagagactaaa 265
             |||||||||||||||||||||
Sbjct: 29407 gtatgcattggagagactaaa 29427
to top
>gb|AC124144.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0099P06,
              complete sequence
          Length = 135117

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 245    gtatgcattggagagactaaa 265
              |||||||||||||||||||||
Sbjct: 130824 gtatgcattggagagactaaa 130844
to top
>gb|AC132277.3| Mus musculus BAC clone RP24-344C7 from chromosome 9, complete sequence
          Length = 175852

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 79     aaacatgaagtgcataaagattgaa 103
              ||||| |||||||||||||||||||
Sbjct: 130220 aaacaggaagtgcataaagattgaa 130196
to top
>emb|AL133465.30| Human DNA sequence from clone RP5-1177M21 on chromosome 20 Contains a
             putative novel gene, ESTs, STSs, GSSs and a CpG island,
             complete sequence
          Length = 88058

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 61    tggtcccatgaaggataaaaacatgaagt 89
             |||||||| |||| |||||||||||||||
Sbjct: 86270 tggtcccaagaagaataaaaacatgaagt 86298
to top
>emb|AL807759.15| Mouse DNA sequence from clone RP23-373H1 on chromosome X, complete
             sequence
          Length = 89833

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 73    ggataaaaacatgaagtgcataaag 97
             ||||||||||||||||| |||||||
Sbjct: 40363 ggataaaaacatgaagttcataaag 40387
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 245     gtatgcattggagagactaaa 265
               |||||||||||||||||||||
Sbjct: 3708477 gtatgcattggagagactaaa 3708497
to top
>gb|AC018474.31| Homo sapiens 12 BAC RP11-757E18 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 172303

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 75    ataaaaacatgaagtgcataa 95
             |||||||||||||||||||||
Sbjct: 36759 ataaaaacatgaagtgcataa 36779
to top
>ref|NM_196578.1| Oryza sativa (japonica cultivar-group) putative speckle-type
           protein (OSJNBa0072A12.18), mRNA
          Length = 939

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 213 atggctcagcatttgcttgcagctgctgaccggtat 248
           |||||||||||||||||||  || |||||| |||||
Sbjct: 658 atggctcagcatttgcttgtcgcggctgacaggtat 693
to top
>gb|AC129083.4| Mus musculus chromosome 6 clone RP23-9E15, complete sequence
          Length = 193732

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 345    cattgccaccagctaaaaactgtt 368
              |||||||||||||||||| |||||
Sbjct: 170159 cattgccaccagctaaaagctgtt 170136
to top
>gb|AC112260.6| Mus musculus BAC clone RP23-185L5 from chromosome 18, complete sequence
          Length = 216325

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 75    ataaaaacatgaagtgcata 94
             ||||||||||||||||||||
Sbjct: 61623 ataaaaacatgaagtgcata 61604
to top
>gb|AC034148.9| Homo sapiens BAC clone RP11-155B1 from 7, complete sequence
          Length = 170928

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 68     atgaaggataaaaacatgaa 87
              ||||||||||||||||||||
Sbjct: 129050 atgaaggataaaaacatgaa 129069
to top
>gb|AC124450.3| Mus musculus BAC clone RP24-215C4 from chromosome 13, complete sequence
          Length = 157531

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 350   ccaccagctaaaaactgttt 369
             ||||||||||||||||||||
Sbjct: 46095 ccaccagctaaaaactgttt 46076
to top
>gb|AC123954.4| Mus musculus BAC clone RP23-249L6 from 13, complete sequence
          Length = 200727

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 218    tcagcatttgcttgcagctg 237
              ||||||||||||||||||||
Sbjct: 108862 tcagcatttgcttgcagctg 108843
to top
>gb|AC119831.6| Mus musculus chromosome 9, clone RP23-281F13, complete sequence
          Length = 195918

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 265    agctgctttctgaactcaag 284
              ||||||||||||||||||||
Sbjct: 109491 agctgctttctgaactcaag 109510
to top
>emb|AL035071.17|HS1085F17 Human DNA sequence from clone RP5-1085F17 on chromosome 20q11.1-11.23
             Contains the DNMT3B gene encoding DNA Cytosine-5
             Methyltransferase 3 beta, the MAPRE1 gene encoding a
             microtubule-associated protein, RP/EB family, member 1,
             part of a novel gene, ESTs, STSs, GSSs, and three CpG
             islands, complete sequence
          Length = 118899

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 329   gctggctgaacagcaccattgccaccag 356
             |||||||||||||| ||| |||||||||
Sbjct: 51549 gctggctgaacagccccagtgccaccag 51522
to top
>gb|AC139238.5| Mus musculus BAC clone RP24-403G3 from chromosome 12, complete sequence
          Length = 170371

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 212   gatggctcagcatttgcttg 231
             ||||||||||||||||||||
Sbjct: 95863 gatggctcagcatttgcttg 95844
to top
>gb|BC045557.1| Homo sapiens chromosome 16 open reading frame 52, mRNA (cDNA clone
            IMAGE:4792351)
          Length = 3106

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 69   tgaaggataaaaacatgaag 88
            ||||||||||||||||||||
Sbjct: 2818 tgaaggataaaaacatgaag 2837
to top
>gb|AC161417.5| Mus musculus BAC clone RP23-325H23 from chromosome 6, complete sequence
          Length = 173502

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 345   cattgccaccagctaaaaactgtt 368
             |||||||||||||||||| |||||
Sbjct: 31493 cattgccaccagctaaaagctgtt 31470
to top
>dbj|AK095585.1| Homo sapiens cDNA FLJ38266 fis, clone FCBBF3001890
          Length = 3047

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 69   tgaaggataaaaacatgaag 88
            ||||||||||||||||||||
Sbjct: 2766 tgaaggataaaaacatgaag 2785
to top
>dbj|AK001191.1| Homo sapiens cDNA FLJ10329 fis, clone NT2RM2000594, highly similar
           to Homo sapiens DNA cytosine-5 methyltransferase 3 beta
           3 mRNA
          Length = 3017

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 329 gctggctgaacagcaccattgccaccag 356
           |||||||||||||| ||| |||||||||
Sbjct: 49  gctggctgaacagccccagtgccaccag 22
to top
>gb|AC096621.9| Mus musculus clone ct7-257p24, complete sequence
          Length = 56568

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 81    acatgaagtgcataaagatt 100
             ||||||||||||||||||||
Sbjct: 55571 acatgaagtgcataaagatt 55590
to top
>ref|NM_006892.3| Homo sapiens DNA (cytosine-5-)-methyltransferase 3 beta (DNMT3B),
            transcript variant 1, mRNA
          Length = 4353

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 329  gctggctgaacagcaccattgccaccag 356
            |||||||||||||| ||| |||||||||
Sbjct: 1177 gctggctgaacagccccagtgccaccag 1150
to top
>ref|NM_175848.1| Homo sapiens DNA (cytosine-5-)-methyltransferase 3 beta (DNMT3B),
            transcript variant 2, mRNA
          Length = 4293

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 329  gctggctgaacagcaccattgccaccag 356
            |||||||||||||| ||| |||||||||
Sbjct: 1177 gctggctgaacagccccagtgccaccag 1150
to top
>ref|NM_175850.1| Homo sapiens DNA (cytosine-5-)-methyltransferase 3 beta (DNMT3B),
            transcript variant 6, mRNA
          Length = 4267

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 329  gctggctgaacagcaccattgccaccag 356
            |||||||||||||| ||| |||||||||
Sbjct: 1156 gctggctgaacagccccagtgccaccag 1129
to top
>ref|NM_175849.1| Homo sapiens DNA (cytosine-5-)-methyltransferase 3 beta (DNMT3B),
            transcript variant 3, mRNA
          Length = 4104

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 329  gctggctgaacagcaccattgccaccag 356
            |||||||||||||| ||| |||||||||
Sbjct: 1177 gctggctgaacagccccagtgccaccag 1150
to top
>gb|AF331857.1|AF331857 Homo sapiens DNA cytosine methyltransferase 3 beta (DNMT3B) mRNA,
            complete cds
          Length = 4335

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 329  gctggctgaacagcaccattgccaccag 356
            |||||||||||||| ||| |||||||||
Sbjct: 1177 gctggctgaacagccccagtgccaccag 1150
to top
>gb|AC154409.2| Mus musculus BAC clone RP24-259B4 from chromosome 14, complete sequence
          Length = 196997

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 92     ataaagattgaagacatgga 111
              ||||||||||||||||||||
Sbjct: 104134 ataaagattgaagacatgga 104115
to top
>gb|AC009019.10| Homo sapiens chromosome 16 clone RP11-101E7, complete sequence
          Length = 179785

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 69    tgaaggataaaaacatgaag 88
             ||||||||||||||||||||
Sbjct: 66559 tgaaggataaaaacatgaag 66578
to top
>emb|CT025569.14| Mouse DNA sequence from clone RP24-68J22 on chromosome 13, complete
              sequence
          Length = 230723

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 99     ttgaagacatggaggctcca 118
              ||||||||||||||||||||
Sbjct: 138327 ttgaagacatggaggctcca 138346
to top
>gb|AF176228.1|AF176228 Homo sapiens DNA cytosine-5 methyltransferase 3B (DNMT3B) mRNA,
            complete cds
          Length = 4267

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 329  gctggctgaacagcaccattgccaccag 356
            |||||||||||||| ||| |||||||||
Sbjct: 1156 gctggctgaacagccccagtgccaccag 1129
to top
>gb|AF156488.1|AF156488 Homo sapiens DNA cytosine-5 methyltransferase 3 beta 1 (DNMT3B)
           mRNA, complete cds
          Length = 4145

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 329 gctggctgaacagcaccattgccaccag 356
           |||||||||||||| ||| |||||||||
Sbjct: 970 gctggctgaacagccccagtgccaccag 943
to top
>gb|AF156487.1|AF156487 Homo sapiens DNA cytosine-5 methyltransferase 3 beta 3 (DNMT3B)
           mRNA, complete cds
          Length = 3897

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 329 gctggctgaacagcaccattgccaccag 356
           |||||||||||||| ||| |||||||||
Sbjct: 970 gctggctgaacagccccagtgccaccag 943
to top
>gb|DQ321787.1| Homo sapiens DNA methyltransferase (DNMT3B) mRNA, DNMT3B-7 allele,
            complete cds, alternatively spliced
          Length = 4369

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 329  gctggctgaacagcaccattgccaccag 356
            |||||||||||||| ||| |||||||||
Sbjct: 1177 gctggctgaacagccccagtgccaccag 1150
to top
>gb|AC148983.2| Mus musculus BAC clone RP23-189G7 from 18, complete sequence
          Length = 212564

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 75    ataaaaacatgaagtgcata 94
             ||||||||||||||||||||
Sbjct: 96757 ataaaaacatgaagtgcata 96776
to top
>dbj|AB208880.1| Homo sapiens mRNA for DNA cytosine-5 methyltransferase 3 beta isoform
            6 variant protein
          Length = 4309

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 329  gctggctgaacagcaccattgccaccag 356
            |||||||||||||| ||| |||||||||
Sbjct: 1155 gctggctgaacagccccagtgccaccag 1128
to top
>emb|AL672082.15| Mouse DNA sequence from clone RP23-67B21 on chromosome X, complete
              sequence
          Length = 243789

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 81     acatgaagtgcataaagatt 100
              ||||||||||||||||||||
Sbjct: 162523 acatgaagtgcataaagatt 162542
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>emb|AL513468.9| Mouse DNA sequence from clone RP23-104I6 on chromosome X, complete
             sequence
          Length = 211194

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 357   ctaaaaactgtttgcttgaaattt 380
             ||||||| ||||||||||||||||
Sbjct: 36280 ctaaaaaatgtttgcttgaaattt 36257


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,496,539
Number of Sequences: 3902068
Number of extensions: 3496539
Number of successful extensions: 77251
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77047
Number of HSP's gapped (non-prelim): 200
length of query: 380
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 358
effective length of database: 17,147,199,772
effective search space: 6138697518376
effective search space used: 6138697518376
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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