ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags4n03 |
|---|---|
| Clone Library Name | barley_pub |
>VDAC1_WHEAT (P46274) Outer mitochondrial membrane protein porin| (Voltage-dependent anion-selective channel protein) (VDAC) Length = 275 Score = 283 bits (725), Expect = 1e-76 Identities = 145/151 (96%), Positives = 147/151 (97%) Frame = +1 Query: 55 MGGPGLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGAAITATSTKKADLILGEIQSQIK 234 MGGPGLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANG AITATSTKKADL +GEIQSQIK Sbjct: 1 MGGPGLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGPAITATSTKKADLTVGEIQSQIK 60 Query: 235 NKNITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINAS 414 NKNITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINAS Sbjct: 61 NKNITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINAS 120 Query: 415 IGLTANPVVNLSAAFGTSALAVGGDVSLDTS 507 IGLTANPVVNLS AFGTSALAVG DVSLDT+ Sbjct: 121 IGLTANPVVNLSGAFGTSALAVGADVSLDTA 151
>VDAC1_ORYSA (Q6K548) Outer mitochondrial membrane protein porin| (Voltage-dependent anion-selective channel protein) (VDAC) Length = 273 Score = 246 bits (628), Expect = 3e-65 Identities = 124/149 (83%), Positives = 136/149 (91%) Frame = +1 Query: 61 GPGLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGAAITATSTKKADLILGEIQSQIKNK 240 GPGLY IGKKA+DLLYRDYQTDHKFTLTTYT+NG AITATSTKKADLI GEIQSQIKNK Sbjct: 2 GPGLYPEIGKKARDLLYRDYQTDHKFTLTTYTSNGVAITATSTKKADLIFGEIQSQIKNK 61 Query: 241 NITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINASIG 420 NITVDVKANS SNV+TT+T D+L PGLK+ILSFAVPDQ+SGK ELQY HDYAG++ASIG Sbjct: 62 NITVDVKANSDSNVVTTVTVDEL-TPGLKSILSFAVPDQRSGKFELQYSHDYAGVSASIG 120 Query: 421 LTANPVVNLSAAFGTSALAVGGDVSLDTS 507 LTA+PVVNLS+ FGT ALAVG DVSLDT+ Sbjct: 121 LTASPVVNLSSVFGTKALAVGADVSLDTA 149
>VDAC2_SOLTU (P42056) 36 kDa outer mitochondrial membrane protein porin| (Voltage-dependent anion-selective channel protein) (VDAC) (POM 36) Length = 275 Score = 203 bits (516), Expect = 3e-52 Identities = 99/149 (66%), Positives = 120/149 (80%) Frame = +1 Query: 61 GPGLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGAAITATSTKKADLILGEIQSQIKNK 240 GPGLYS IGKKA+DLLYRDY +DHKFT+TTY+ G AITA+ KK +L L ++ +Q+KNK Sbjct: 3 GPGLYSDIGKKARDLLYRDYVSDHKFTVTTYSTTGVAITASGLKKGELFLADVSTQLKNK 62 Query: 241 NITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINASIG 420 NIT DVK ++ SNV TTIT D+ APGLKTI SF VPDQKSGKVELQYLH+YAGIN SIG Sbjct: 63 NITTDVKVDTNSNVYTTITVDE-PAPGLKTIFSFVVPDQKSGKVELQYLHEYAGINTSIG 121 Query: 421 LTANPVVNLSAAFGTSALAVGGDVSLDTS 507 LTA+P+VN S G + +A+G D+S DT+ Sbjct: 122 LTASPLVNFSGVAGNNTVALGTDLSFDTA 150
>VDAC1_SOLTU (P42055) 34 kDa outer mitochondrial membrane protein porin| (Voltage-dependent anion-selective channel protein) (VDAC) (POM 34) Length = 275 Score = 202 bits (515), Expect = 3e-52 Identities = 94/148 (63%), Positives = 122/148 (82%) Frame = +1 Query: 61 GPGLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGAAITATSTKKADLILGEIQSQIKNK 240 GPGLY+ IGKKA+DLLY+DYQ+DHKF++TTY+ G IT++ +KK DL L ++ +Q+KNK Sbjct: 3 GPGLYTEIGKKARDLLYKDYQSDHKFSITTYSPTGVVITSSGSKKGDLFLADVNTQLKNK 62 Query: 241 NITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINASIG 420 N+T D+K ++ SN+ TTIT D+ AAPGLKTILSF VPDQ+SGK+E+QYLHDYAGI S+G Sbjct: 63 NVTTDIKVDTNSNLFTTITVDE-AAPGLKTILSFRVPDQRSGKLEVQYLHDYAGICTSVG 121 Query: 421 LTANPVVNLSAAFGTSALAVGGDVSLDT 504 LTANP+VN S GT+ +A+G DVS DT Sbjct: 122 LTANPIVNFSGVVGTNIIALGTDVSFDT 149
>VDAC_PEA (P42054) Outer plastidial membrane protein porin (Voltage-dependent| anion-selective channel protein) (VDAC) Length = 275 Score = 196 bits (497), Expect = 4e-50 Identities = 91/148 (61%), Positives = 121/148 (81%) Frame = +1 Query: 61 GPGLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGAAITATSTKKADLILGEIQSQIKNK 240 GPGLY+ IGKKA+DLLY+DY +D KFT++TY+ G AIT++ TKK +L LG++ +Q+KNK Sbjct: 3 GPGLYTDIGKKARDLLYKDYHSDKKFTISTYSPTGVAITSSGTKKGELFLGDVNTQLKNK 62 Query: 241 NITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINASIG 420 NIT D+K ++ SN+ TTIT ++ APG+K ILSF VP+Q SGKVELQYLH+YAGI++S+G Sbjct: 63 NITTDIKVDTNSNLFTTITVNE-PAPGVKAILSFKVPEQTSGKVELQYLHEYAGISSSVG 121 Query: 421 LTANPVVNLSAAFGTSALAVGGDVSLDT 504 L ANP+VN S+ GT+ALA G D+S DT Sbjct: 122 LKANPIVNFSSVIGTNALAFGADISFDT 149
>VDAC_MAIZE (P42057) Outer plastidial membrane protein porin (Voltage-dependent| anion-selective channel protein) (VDAC) Length = 277 Score = 196 bits (497), Expect = 4e-50 Identities = 92/147 (62%), Positives = 118/147 (80%) Frame = +1 Query: 67 GLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGAAITATSTKKADLILGEIQSQIKNKNI 246 GLY+ IGKK +DLLY+DY T KF LTT + NG AITA T+K + I GE+ +QIKNK + Sbjct: 6 GLYTDIGKKTRDLLYKDYNTHQKFCLTTSSPNGVAITAAGTRKNESIFGELHTQIKNKKL 65 Query: 247 TVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINASIGLT 426 TVDVKANS S+++TTIT D+ PGLK+I++ VPDQ+SGK+E QYLH+YAG+NAS+GL Sbjct: 66 TVDVKANSESDLLTTITVDEFGTPGLKSIINLVVPDQRSGKLEFQYLHEYAGVNASVGLN 125 Query: 427 ANPVVNLSAAFGTSALAVGGDVSLDTS 507 +NP+VNLS AFG+ AL+VG DVS DT+ Sbjct: 126 SNPMVNLSGAFGSKALSVGVDVSFDTA 152
>VDAC1_ARATH (Q9SRH5) Outer mitochondrial membrane protein porin 1| (Voltage-dependent anion-selective channel protein 1) (VDAC 1) Length = 275 Score = 181 bits (458), Expect = 1e-45 Identities = 88/148 (59%), Positives = 113/148 (76%) Frame = +1 Query: 61 GPGLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGAAITATSTKKADLILGEIQSQIKNK 240 GPGLY+ IGKKA+DLLY+D+ +D KF++TT++ G AIT+T TKK DL+LG++ Q + K Sbjct: 3 GPGLYTEIGKKARDLLYKDHNSDQKFSITTFSPAGVAITSTGTKKGDLLLGDVAFQSRRK 62 Query: 241 NITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINASIG 420 NIT D+K + S + T T D+ AAPGL++I SF VPDQ SGKVELQYLH+YAGI+ S+G Sbjct: 63 NITTDLKVCTDSTFLITATVDE-AAPGLRSIFSFKVPDQNSGKVELQYLHEYAGISTSMG 121 Query: 421 LTANPVVNLSAAFGTSALAVGGDVSLDT 504 LT NP VN S G++ LAVG DVS DT Sbjct: 122 LTQNPTVNFSGVIGSNVLAVGTDVSFDT 149
>VDAC2_ARATH (Q9SMX3) Outer mitochondrial membrane protein porin 2| (Voltage-dependent anion-selective channel protein 2) (VDAC 2) Length = 273 Score = 177 bits (450), Expect = 1e-44 Identities = 83/148 (56%), Positives = 111/148 (75%) Frame = +1 Query: 61 GPGLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGAAITATSTKKADLILGEIQSQIKNK 240 GPGLY+ IGKKA+DLLYRDYQ D KF++TTY++ G AIT T T K L LG++ +Q+KN Sbjct: 3 GPGLYTEIGKKARDLLYRDYQGDQKFSVTTYSSTGVAITTTGTNKGSLFLGDVATQVKNN 62 Query: 241 NITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINASIG 420 N T DVK ++ S+++TT+T D+ APGLK I+ +PD KSGK E+QY HDYAGI+ S+G Sbjct: 63 NFTADVKVSTDSSLLTTLTFDE-PAPGLKVIVQAKLPDHKSGKAEVQYFHDYAGISTSVG 121 Query: 421 LTANPVVNLSAAFGTSALAVGGDVSLDT 504 TA P+VN S GT+ L++G DV+ +T Sbjct: 122 FTATPIVNFSGVVGTNGLSLGTDVAYNT 149
>VDAC_CAEEL (Q21752) Probable voltage-dependent anion-selective channel| Length = 283 Score = 56.6 bits (135), Expect = 4e-08 Identities = 42/158 (26%), Positives = 73/158 (46%), Gaps = 10/158 (6%) Frame = +1 Query: 64 PGLYSGIGKKAKDLLYRDYQTDH-KFTLTTYTANGAAITATSTKKADLILG------EIQ 222 P ++ +GK AKDL + Y K TT + + S ++ G +++ Sbjct: 3 PPTFADLGKSAKDLFNKGYNFGFLKIDSTTRAGDNKEVEFKSAASHNIGSGKLGGNLDVK 62 Query: 223 SQIKNKNITVDVKANSASNVITTITADDLAAPGLKTIL-SFAVPD--QKSGKVELQYLHD 393 +I IT+ K N+ + + T I ++ GLK L S P ++SGKV+L + Sbjct: 63 YKIPQYGITLTEKWNTENQLGTVIEVNEQFGRGLKVTLDSLYAPHAGKRSGKVKLDWALP 122 Query: 394 YAGINASIGLTANPVVNLSAAFGTSALAVGGDVSLDTS 507 A + A +G+T+ PV+N + F +G + D+S Sbjct: 123 TARVTADVGVTSAPVINAAGVFSRDGWLIGAAATFDSS 160
>VDAC_DROME (Q94920) Voltage-dependent anion-selective channel (Porin) (DmVDAC)| Length = 281 Score = 54.7 bits (130), Expect = 1e-07 Identities = 40/156 (25%), Positives = 75/156 (48%), Gaps = 9/156 (5%) Frame = +1 Query: 64 PGLYSGIGKKAKDLLYRDYQTD-HKFTLTTYTANGAAITAT--STKKADLILGEIQS--Q 228 P YS +GK+A+D+ + Y K L T T++G S +++ + G +++ + Sbjct: 2 PPSYSDLGKQARDIFSKGYNFGLWKLDLKTKTSSGIEFNTAGHSNQESGKVFGSLETKYK 61 Query: 229 IKNKNITVDVKANSASNVITTITADDLAAPGLKTIL--SFAVPD-QKSGKVELQYLHDYA 399 +K+ +T+ K N+ + + T + D GLK L +FA K+GK ++ Y H+ Sbjct: 62 VKDYGLTLTEKWNTDNTLFTEVAVQDQLLEGLKLSLEGNFAPQSGNKNGKFKVAYGHENV 121 Query: 400 GINASIGL-TANPVVNLSAAFGTSALAVGGDVSLDT 504 ++ + + P++N SA G G + DT Sbjct: 122 KADSDVNIDLKGPLINASAVLGYQGWLAGYQTAFDT 157
>VDAC2_XENLA (P81004) Voltage-dependent anion-selective channel protein 2 (Outer| mitochondrial membrane protein porin) Length = 282 Score = 51.2 bits (121), Expect = 2e-06 Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 9/157 (5%) Frame = +1 Query: 64 PGLYSGIGKKAKDLLYRDYQTD-HKFTLTTYTANGAAITATSTKKAD--LILGEIQSQIK 234 P Y+ +GK A+D+ + Y K + T +A G T + T D + G ++++ K Sbjct: 3 PPSYADLGKSARDIFNKGYGFGLVKLDVKTKSATGVEFTTSGTSNTDSGKVNGSLETKYK 62 Query: 235 --NKNITVDVKANSASNVITTITADDLAAPGLKTILSFAV---PDQKSGKVELQYLHDYA 399 +T K N+ + + T I +D A GLK +KSGKV+ Y +Y Sbjct: 63 WGEYGLTFTEKWNTDNTLGTEIAIEDQIAKGLKLTFDTTFSPNTGKKSGKVKAAYKQEYV 122 Query: 400 GINASIGLT-ANPVVNLSAAFGTSALAVGGDVSLDTS 507 + + A P ++ SA G G ++ D++ Sbjct: 123 NLGCDVDFDFAGPAIHGSAVVGYEGWLAGYQMTFDSA 159
>VDAC2_MELGA (P82013) Voltage-dependent anion-selective channel protein 2| (VDAC-2) (Outer mitochondrial membrane protein porin 2) Length = 282 Score = 48.5 bits (114), Expect = 1e-05 Identities = 38/157 (24%), Positives = 70/157 (44%), Gaps = 9/157 (5%) Frame = +1 Query: 64 PGLYSGIGKKAKDLLYRDYQTD-HKFTLTTYTANGAAITATSTKKADL--ILGEIQSQIK 234 P Y+ +GK A+D+ + Y K + T +A+G T + + D + G ++++ K Sbjct: 3 PPSYADLGKSARDIFNKGYGFGLVKLDVKTKSASGVEFTTSGSSNTDTGKVNGSLETKYK 62 Query: 235 --NKNITVDVKANSASNVITTITADDLAAPGLKTILSFAV---PDQKSGKVELQYLHDYA 399 +T K N+ + + T I +D A GLK +KSGK++ Y + Sbjct: 63 WAEYGLTFTEKWNTDNTLGTEIAIEDQIAKGLKLTFDTTFSPNTGKKSGKIKSAYKRECL 122 Query: 400 GINASIGLT-ANPVVNLSAAFGTSALAVGGDVSLDTS 507 + + A P ++ SA FG G ++ D++ Sbjct: 123 NLGCDVDFDFAGPAIHGSAVFGYEGWLAGYQMTFDSA 159
>VDAC1_MOUSE (Q60932) Voltage-dependent anion-selective channel protein 1| (VDAC-1) (mVDAC1) (mVDAC5) (Outer mitochondrial membrane protein porin 1) (Plasmalemmal porin) Length = 296 Score = 43.1 bits (100), Expect = 4e-04 Identities = 38/160 (23%), Positives = 73/160 (45%), Gaps = 9/160 (5%) Frame = +1 Query: 55 MGGPGLYSGIGKKAKDLLYRDYQTD-HKFTLTTYTANGAAITATSTKKADL--ILGEIQS 225 M P Y+ +GK A+D+ + Y K L T + NG T++ + + + G +++ Sbjct: 14 MAVPPTYADLGKSARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANTETTKVNGSLET 73 Query: 226 QIK--NKNITVDVKANSASNVITTITADDLAAPGLK-TILSFAVPD--QKSGKVELQYLH 390 + + +T K N+ + + T IT +D A GLK T S P+ +K+ K++ Y Sbjct: 74 KYRWTEYGLTFTEKWNTDNTLGTEITVEDQLARGLKLTFDSSFSPNTGKKNAKIKTGYKR 133 Query: 391 DYAGINASIGL-TANPVVNLSAAFGTSALAVGGDVSLDTS 507 ++ + + A P + + G G ++ +TS Sbjct: 134 EHINLGCDVDFDIAGPSIRGALVLGYEGWLAGYQMNFETS 173
>VDAC1_RAT (Q9Z2L0) Voltage-dependent anion-selective channel protein 1| (VDAC-1) (rVDAC1) (Outer mitochondrial membrane protein porin 1) Length = 282 Score = 42.4 bits (98), Expect = 7e-04 Identities = 37/157 (23%), Positives = 72/157 (45%), Gaps = 9/157 (5%) Frame = +1 Query: 64 PGLYSGIGKKAKDLLYRDYQTD-HKFTLTTYTANGAAITATSTKKADL--ILGEIQSQIK 234 P Y+ +GK A+D+ + Y K L T + NG T++ + + + G ++++ + Sbjct: 3 PPTYADLGKSARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANTETTKVNGSLETKYR 62 Query: 235 --NKNITVDVKANSASNVITTITADDLAAPGLK-TILSFAVPD--QKSGKVELQYLHDYA 399 +T K N+ + + T IT +D A GLK T S P+ +K+ K++ Y ++ Sbjct: 63 WTEYGLTFTEKWNTDNTLGTEITVEDQLARGLKLTFDSSFSPNTGKKNAKIKTGYKREHI 122 Query: 400 GINASIGL-TANPVVNLSAAFGTSALAVGGDVSLDTS 507 + + A P + + G G ++ +TS Sbjct: 123 NLGCDVDFDIAGPSIRGALVLGYEGWLAGYQMNFETS 159
>VDAC1_PIG (Q9MZ16) Voltage-dependent anion-selective channel protein 1| (VDAC-1) Length = 282 Score = 42.4 bits (98), Expect = 7e-04 Identities = 36/157 (22%), Positives = 72/157 (45%), Gaps = 9/157 (5%) Frame = +1 Query: 64 PGLYSGIGKKAKDLLYRDYQTD-HKFTLTTYTANGAAITATSTKKADL--ILGEIQSQIK 234 P Y+ +GK A+D+ + Y K L T + NG T++ + + + G ++++ + Sbjct: 3 PPTYADLGKSARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANTETTKVTGSLETKYR 62 Query: 235 --NKNITVDVKANSASNVITTITADDLAAPGLK-TILSFAVPD--QKSGKVELQYLHDYA 399 +T K N+ + + T IT +D A GLK T S P+ +K+ K++ Y ++ Sbjct: 63 WTEYGLTFTEKWNTDNTLGTEITVEDQLARGLKLTFDSSFSPNTGKKNAKIKTGYKREHV 122 Query: 400 GINASIGL-TANPVVNLSAAFGTSALAVGGDVSLDTS 507 + + A P + + G G ++ +T+ Sbjct: 123 NLGCDVDFDIAGPSIRGALVLGYEGWLAGYQMNFETA 159
>VDAC1_RABIT (Q9TT15) Voltage-dependent anion-selective channel protein 1| (VDAC-1) (Outer mitochondrial membrane protein porin 1) Length = 282 Score = 42.0 bits (97), Expect = 0.001 Identities = 36/157 (22%), Positives = 72/157 (45%), Gaps = 9/157 (5%) Frame = +1 Query: 64 PGLYSGIGKKAKDLLYRDYQTD-HKFTLTTYTANGAAITATSTKKADL--ILGEIQSQIK 234 P Y+ +GK A+D+ + Y K L T + NG T++ + + + G ++++ + Sbjct: 3 PPTYADLGKSARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANTETTKVTGSLETKYR 62 Query: 235 --NKNITVDVKANSASNVITTITADDLAAPGLK-TILSFAVPD--QKSGKVELQYLHDYA 399 +T K N+ + + T IT +D A GLK T S P+ +K+ K++ Y ++ Sbjct: 63 WTEYGLTFTEKWNTDNTLGTEITVEDQLARGLKLTFDSSFSPNTGKKNAKIKTGYKREHI 122 Query: 400 GINASIGL-TANPVVNLSAAFGTSALAVGGDVSLDTS 507 + + A P + + G G ++ +T+ Sbjct: 123 NLGCDVDFDIAGPSIRGALVLGYEGWLAGYQMNFETA 159
>VDAC1_BOVIN (P45879) Voltage-dependent anion-selective channel protein 1| (VDAC-1) (Plasmalemmal porin) (Brain-derived voltage-dependent anion channel 1) (BR1-VDAC) Length = 282 Score = 42.0 bits (97), Expect = 0.001 Identities = 36/157 (22%), Positives = 72/157 (45%), Gaps = 9/157 (5%) Frame = +1 Query: 64 PGLYSGIGKKAKDLLYRDYQTD-HKFTLTTYTANGAAITATSTKKADL--ILGEIQSQIK 234 P Y+ +GK A+D+ + Y K L T + NG T++ + + + G ++++ + Sbjct: 3 PPTYADLGKSARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANTETTKVTGSLETKYR 62 Query: 235 --NKNITVDVKANSASNVITTITADDLAAPGLK-TILSFAVPD--QKSGKVELQYLHDYA 399 +T K N+ + + T IT +D A GLK T S P+ +K+ K++ Y ++ Sbjct: 63 WTEYGLTFTEKWNTDNTLGTEITVEDQLARGLKLTFDSSFSPNTGKKNAKIKTGYKREHI 122 Query: 400 GINASIGL-TANPVVNLSAAFGTSALAVGGDVSLDTS 507 + + A P + + G G ++ +T+ Sbjct: 123 NLGCDVDFDIAGPSIRGALVLGYEGWLAGYQMNFETA 159
>VDAC1_HUMAN (P21796) Voltage-dependent anion-selective channel protein 1| (VDAC-1) (hVDAC1) (Outer mitochondrial membrane protein porin 1) (Plasmalemmal porin) (Porin 31HL) (Porin 31HM) Length = 282 Score = 41.2 bits (95), Expect = 0.002 Identities = 36/157 (22%), Positives = 72/157 (45%), Gaps = 9/157 (5%) Frame = +1 Query: 64 PGLYSGIGKKAKDLLYRDYQTD-HKFTLTTYTANGAAITATSTKKADL--ILGEIQSQIK 234 P Y+ +GK A+D+ + Y K L T + NG T++ + + + G ++++ + Sbjct: 3 PPTYADLGKSARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANTETTKVTGSLETKYR 62 Query: 235 --NKNITVDVKANSASNVITTITADDLAAPGLK-TILSFAVPD--QKSGKVELQYLHDYA 399 +T K N+ + + T IT +D A GLK T S P+ +K+ K++ Y ++ Sbjct: 63 WTEYGLTFTEKWNTDNTLGTEITVEDQLARGLKLTFDSSFSPNTGKKNAKIKTGYKREHI 122 Query: 400 GINASIGL-TANPVVNLSAAFGTSALAVGGDVSLDTS 507 + + A P + + G G ++ +T+ Sbjct: 123 NLGCDMDFDIAGPSIRGALVLGYEGWLAGYQMNFETA 159
>VDAC_DICDI (Q01501) Outer mitochondrial membrane protein porin| (Voltage-dependent anion-selective channel protein) (VDAC) Length = 275 Score = 34.7 bits (78), Expect = 0.15 Identities = 38/148 (25%), Positives = 56/148 (37%), Gaps = 20/148 (13%) Frame = +1 Query: 64 PGLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGAAITATSTKKADLILGEIQ------- 222 PGLY+ + K D + +D+ K TT+ +I A + K ++ IQ Sbjct: 3 PGLYADLTKPTADFIKKDFAETFKLD-TTFKGKYGSIVAVTDIKDSGVVASIQPKADFTK 61 Query: 223 --SQIKNKNITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSG-KVELQYL-- 387 ++ N N TVD N TI + PGLK + A D K E QY Sbjct: 62 YLGKVSNGNFTVD--TNGVKKGEFTI---ENIIPGLKAV---ANGDSKQNFSTEFQYKKD 113 Query: 388 --------HDYAGINASIGLTANPVVNL 447 H+ N S+ NP ++ Sbjct: 114 KIAFTLFGHNNKSFNTSLAFLINPTFSV 141
>POLG_TEV (P04517) Genome polyprotein [Contains: P1 proteinase (N-terminal| protein); Helper component proteinase (EC 3.4.22.45) (HC-pro); Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic inclusion protein (EC 3.6.1.-) (CI); 6 kDa protein 2 (6K2); Viral geno Length = 3054 Score = 32.7 bits (73), Expect = 0.59 Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 3/136 (2%) Frame = +1 Query: 73 YSGIGKKAKDLLYRDYQTDHKFTLTTYTANGAAITA--TSTKKADLILGEIQSQIKNK-N 243 Y+ + K L+ + Y+ K T + G I TS KK ++ I I+N Sbjct: 1420 YNDVDSLGKLLVQKGYKVS-KIDGRTMKSGGTEIITEGTSVKKHFIVATNI---IENGVT 1475 Query: 244 ITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINASIGL 423 I +DV + + V+ + D+ A KT++S+ QK G+V G+ IG Sbjct: 1476 IDIDVVVDFGTKVVPVLDVDNRAVQYNKTVVSYGERIQKLGRVG----RHKEGVALRIGQ 1531 Query: 424 TANPVVNLSAAFGTSA 471 T +V + T A Sbjct: 1532 TNKTLVEIPEMVATEA 1547
>VDAC_SCHPO (Q9P544) Probable outer mitochondrial membrane protein porin| Length = 282 Score = 32.3 bits (72), Expect = 0.77 Identities = 27/127 (21%), Positives = 54/127 (42%), Gaps = 11/127 (8%) Frame = +1 Query: 64 PGLYSGIGKKAKDLLYRDYQTDHK-FTLTTYTANGAAITATSTKKA-DLILGEIQSQIKN 237 P Y+ I K DLL RD+ ++ T NG + + A +I G++++ + Sbjct: 3 PPAYAAINKLCNDLLQRDFPVGATLLSVRTTAPNGVVFNVSGNQDAKGVISGKLETSFND 62 Query: 238 K--NITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVEL-------QYLH 390 K +T+ +A+ + + + + APGL ++ + K + +H Sbjct: 63 KANGLTISQGWTTANVLESKVGLSEQFAPGLHLNVNTTFSPATAAKTAILNLEHQHPLIH 122 Query: 391 DYAGINA 411 +A +NA Sbjct: 123 THASVNA 129
>COAT_TRSV (Q88894) Coat protein precursor (Capsid protein)| Length = 515 Score = 30.8 bits (68), Expect = 2.2 Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%) Frame = +1 Query: 349 PDQKSGKVELQ---YLHDYAGINASIGLTANPVVNLSAAFG 462 PD +G V Y+HD+A +A++ L +NP+ L AA G Sbjct: 367 PDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAATG 407
>POL2_TRSV (Q6UR06) RNA2 polyprotein (P2) [Contains: P2A protein (2A); Movement| protein (2B-MP); Coat protein (2C-CP)] Length = 1101 Score = 30.8 bits (68), Expect = 2.2 Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%) Frame = +1 Query: 349 PDQKSGKVELQ---YLHDYAGINASIGLTANPVVNLSAAFG 462 PD +G V Y+HD+A +A++ L +NP+ L AA G Sbjct: 953 PDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAATG 993
>VDAC1_YEAST (P04840) Outer mitochondrial membrane protein porin 1| (Voltage-dependent anion-selective channel protein 1) (VDAC 1) Length = 282 Score = 30.4 bits (67), Expect = 2.9 Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 6/97 (6%) Frame = +1 Query: 64 PGLYSGIGKKAKDLLYRDY--QTDHKFTLTTYTANGA--AITATSTKKADLILGEIQSQI 231 P +YS I + DLL +D+ T F + T TANG ++ A K + +++++ Sbjct: 2 PPVYSDISRNINDLLNKDFYHATPAAFDVQTTTANGIKFSLKAKQPVKDGPLSTNVEAKL 61 Query: 232 KNKNITVDVKA--NSASNVITTITADDLAAPGLKTIL 336 +K + + ++ +N+ T + +L PGLK L Sbjct: 62 NDKQTGLGLTQGWSNTNNLQTKLEFANL-TPGLKNEL 97
>SRP_DROME (P52172) Box A-binding factor (ABF) (GATA-binding factor-B)| (Transcription factor GATA-B) (dGATA-B) (Protein serpent) Length = 1264 Score = 30.4 bits (67), Expect = 2.9 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%) Frame = -2 Query: 505 MYQATHHHQQLEH*FQTQQRG*L--QDWQSSQCLH*YQHNHVSTGA 374 ++Q HHHQQ H Q QQ+ Q Q Q H + HN+ ++ A Sbjct: 406 LHQQQHHHQQQLHHHQQQQQQLYHQQQQQQQQQQHHHHHNNSTSSA 451
>GTFB_STRMU (P08987) Glucosyltransferase-I precursor (EC 2.4.1.5) (GTF-I)| (Dextransucrase) (Sucrose 6-glucosyltransferase) Length = 1476 Score = 30.0 bits (66), Expect = 3.8 Identities = 21/58 (36%), Positives = 28/58 (48%) Frame = +1 Query: 142 LTTYTANGAAITATSTKKADLILGEIQSQIKNKNITVDVKANSASNVITTITADDLAA 315 +T T +G + A S E +SQI N + T V AN SNV T +T+ AA Sbjct: 26 MTLTTLSGGLVKADSN--------ESKSQISNDSNTSVVTANEESNVTTEVTSKQEAA 75
>RBF1_CANAL (Q00312) Transcription factor RBF1 (RPG-box-binding factor)| (Repressor-activator protein 1) Length = 527 Score = 30.0 bits (66), Expect = 3.8 Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 3/60 (5%) Frame = -2 Query: 499 QATHHHQQLEH*FQTQQRG*LQDWQSSQCL---H*YQHNHVSTGAPPFQISDQEQQSSRW 329 QA HQQL+H +Q QQ+ Q Q SQ L H QH HV + E SR+ Sbjct: 122 QAQREHQQLQHAYQQQQQ-LHQLGQLSQQLAQPHLSQHEHVRDALTTDEFDTNEDLRSRY 180
>LEU2_CAMJR (Q5HS78) 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 468 Score = 30.0 bits (66), Expect = 3.8 Identities = 18/70 (25%), Positives = 32/70 (45%) Frame = +1 Query: 85 GKKAKDLLYRDYQTDHKFTLTTYTANGAAITATSTKKADLILGEIQSQIKNKNITVDVKA 264 GK +LY D H+ T + +G + +ADL L I + K++ ++ + Sbjct: 18 GKNELPILYIDRHLIHEVT-SPQAFSGLKMAKRRMARADLTLATIDHDVSTKSVDLNACS 76 Query: 265 NSASNVITTI 294 + A ITT+ Sbjct: 77 DMAKEQITTL 86
>GATA6_PIG (Q95JA5) Transcription factor GATA-6 (GATA-binding factor 6)| Length = 446 Score = 29.6 bits (65), Expect = 5.0 Identities = 14/49 (28%), Positives = 22/49 (44%) Frame = +3 Query: 9 HASSSGAGASQLTGGNGRARPLLRDRQEGQGSALQGLPDRPQVHPHHLH 155 +A++ G GA ++GG+G + R+ S P H HH H Sbjct: 135 YAAAGGGGAGGVSGGSGGGLAAMGSREHQYSSLSAARPLNGTYHHHHHH 183
>RHLB_XANAC (Q8PFZ3) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 571 Score = 29.6 bits (65), Expect = 5.0 Identities = 15/41 (36%), Positives = 19/41 (46%) Frame = +3 Query: 15 SSSGAGASQLTGGNGRARPLLRDRQEGQGSALQGLPDRPQV 137 S SG G G +G+ RP + R EGQ A + P V Sbjct: 444 SGSGGGRRDGAGADGKPRPRRKPRVEGQAPAAAASTEHPVV 484
>LEU2_CAMJE (Q9PLW1) 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 470 Score = 29.3 bits (64), Expect = 6.5 Identities = 18/70 (25%), Positives = 32/70 (45%) Frame = +1 Query: 85 GKKAKDLLYRDYQTDHKFTLTTYTANGAAITATSTKKADLILGEIQSQIKNKNITVDVKA 264 GK +LY D H+ T + +G + +ADL L I + K++ ++ + Sbjct: 20 GKNELPILYIDRHLIHEVT-SPQAFSGLKMAKRRMARADLTLATIDHDVSTKSMDLNACS 78 Query: 265 NSASNVITTI 294 + A ITT+ Sbjct: 79 DMAKEQITTL 88
>TBP2_HAEIN (P44971) Probable transferrin-binding protein 2 precursor| Length = 625 Score = 29.3 bits (64), Expect = 6.5 Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Frame = +1 Query: 88 KKAKDLLYRDYQTDHKFTLTTYTANGA-AITATSTKKADLILGEIQSQIKNKNITVDVKA 264 K K L R + F++ NG A T T+T K DL++ SQ KN I + K Sbjct: 510 KTLKGSLKRADSQNPVFSIEANFKNGGNAFTGTATAK-DLVIDGKNSQTKNTPINITTKV 568 Query: 265 NSA 273 N A Sbjct: 569 NGA 571
>PROA_RHOPA (Q6NDE4) Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41)| (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase) Length = 430 Score = 28.9 bits (63), Expect = 8.5 Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 1/77 (1%) Frame = +1 Query: 244 ITVDVKANSASNVITTITAD-DLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINASIG 420 +T +KA S +TT+ D A L+ A P+QK+ +E AG + + Sbjct: 1 MTASLKAIDGSAELTTLMTDLGRQARAAARTLALAPPEQKNRALEAMERAIRAGADKILA 60 Query: 421 LTANPVVNLSAAFGTSA 471 A V + AA TSA Sbjct: 61 ANAEDVADAKAAGTTSA 77 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.311 0.129 0.349 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 67,822,124 Number of Sequences: 219361 Number of extensions: 1313383 Number of successful extensions: 3284 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 3160 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3274 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3754426130 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits)
