ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags5b01 |
|---|---|
| Clone Library Name | barley_pub |
>THN3_HORVU (P08772) Leaf-specific thionin DB4 precursor [Contains:| Leaf-specific thionin DB4; Acidic protein] Length = 137 Score = 234 bits (597), Expect = 4e-62 Identities = 105/107 (98%), Positives = 106/107 (99%) Frame = +3 Query: 3 CCKDTLARNCYNTCRFAGGSRPVCAGACRCKIISGPKCPSDYPKLNLLPESGEPDVTQYC 182 CCKDTLARNCYNTC FAGGSRPVCAGACRCKIISGPKCPSDYPKLNLLPESGEPDVTQYC Sbjct: 31 CCKDTLARNCYNTCHFAGGSRPVCAGACRCKIISGPKCPSDYPKLNLLPESGEPDVTQYC 90 Query: 183 TIGCRNSVCNNMDNVFRGQEMKFDMGLCSNACARFCNDGAVIQSVEA 323 TIGCRNSVC+NMDNVFRGQEMKFDMGLCSNACARFCNDGAVIQSVEA Sbjct: 91 TIGCRNSVCDNMDNVFRGQEMKFDMGLCSNACARFCNDGAVIQSVEA 137
>THN6_HORVU (P09618) Leaf-specific thionin BTH6 precursor [Contains:| Leaf-specific thionin BTH6; Acidic protein] Length = 137 Score = 234 bits (596), Expect = 5e-62 Identities = 105/107 (98%), Positives = 106/107 (99%) Frame = +3 Query: 3 CCKDTLARNCYNTCRFAGGSRPVCAGACRCKIISGPKCPSDYPKLNLLPESGEPDVTQYC 182 CCKDTLARNCYNTCRFAGGSRPVCAGACRCKIISGPKCPSDYPKLNLLPESGEPDVTQYC Sbjct: 31 CCKDTLARNCYNTCRFAGGSRPVCAGACRCKIISGPKCPSDYPKLNLLPESGEPDVTQYC 90 Query: 183 TIGCRNSVCNNMDNVFRGQEMKFDMGLCSNACARFCNDGAVIQSVEA 323 TIGC NSVC+NMDNVFRGQEMKFDMGLCSNACARFCNDGAVIQSVEA Sbjct: 91 TIGCTNSVCDNMDNVFRGQEMKFDMGLCSNACARFCNDGAVIQSVEA 137
>THN7_HORVU (Q42838) Thionin BTH7 precursor [Contains: Thionin BTH7; Acidic| protein] Length = 137 Score = 208 bits (530), Expect = 2e-54 Identities = 93/107 (86%), Positives = 97/107 (90%) Frame = +3 Query: 3 CCKDTLARNCYNTCRFAGGSRPVCAGACRCKIISGPKCPSDYPKLNLLPESGEPDVTQYC 182 CCK+T RNCYN CRFAGGSRPVCA AC CKIISGP CP DYPKLNLLPESGEP+VT+YC Sbjct: 31 CCKNTTGRNCYNACRFAGGSRPVCATACGCKIISGPTCPRDYPKLNLLPESGEPNVTEYC 90 Query: 183 TIGCRNSVCNNMDNVFRGQEMKFDMGLCSNACARFCNDGAVIQSVEA 323 TIGCR SVC+NMDNV RGQEMKFDMGLCSNACARFCNDG VIQSVEA Sbjct: 91 TIGCRTSVCDNMDNVSRGQEMKFDMGLCSNACARFCNDGEVIQSVEA 137
>THN5_HORVU (P09617) Leaf-specific thionin precursor [Contains: Leaf-specific| thionin; Acidic protein] Length = 137 Score = 207 bits (526), Expect = 6e-54 Identities = 92/107 (85%), Positives = 96/107 (89%) Frame = +3 Query: 3 CCKDTLARNCYNTCRFAGGSRPVCAGACRCKIISGPKCPSDYPKLNLLPESGEPDVTQYC 182 CCK+T RNCYN CRFAGGSRPVCA AC CKIISGP CP DYPKLNLLPESGEP+ T+YC Sbjct: 31 CCKNTTGRNCYNACRFAGGSRPVCATACGCKIISGPTCPRDYPKLNLLPESGEPNATEYC 90 Query: 183 TIGCRNSVCNNMDNVFRGQEMKFDMGLCSNACARFCNDGAVIQSVEA 323 TIGCR SVC+NMDNV RGQEMKFDMGLCSNACARFCNDG VIQSVEA Sbjct: 91 TIGCRTSVCDNMDNVSRGQEMKFDMGLCSNACARFCNDGEVIQSVEA 137
>THNX_HORVU (Q8H0Q5) Probable leaf thionin precursor [Contains: Probable leaf| thionin; Acidic protein] Length = 137 Score = 204 bits (520), Expect = 3e-53 Identities = 91/107 (85%), Positives = 95/107 (88%) Frame = +3 Query: 3 CCKDTLARNCYNTCRFAGGSRPVCAGACRCKIISGPKCPSDYPKLNLLPESGEPDVTQYC 182 CCK+T RNCYN C FAGGSRPVCA AC CKIISGP CP DYPKLNLLPESGEP+ T+YC Sbjct: 31 CCKNTTGRNCYNACHFAGGSRPVCATACGCKIISGPTCPRDYPKLNLLPESGEPNATEYC 90 Query: 183 TIGCRNSVCNNMDNVFRGQEMKFDMGLCSNACARFCNDGAVIQSVEA 323 TIGCR SVC+NMDNV RGQEMKFDMGLCSNACARFCNDG VIQSVEA Sbjct: 91 TIGCRTSVCDNMDNVSRGQEMKFDMGLCSNACARFCNDGDVIQSVEA 137
>THN1_WHEAT (P01544) Alpha-1-purothionin precursor (Purothionin A-II)| [Contains: Alpha-1-purothionin; Acidic protein] (Fragment) Length = 126 Score = 118 bits (295), Expect = 4e-27 Identities = 55/108 (50%), Positives = 71/108 (65%), Gaps = 1/108 (0%) Frame = +3 Query: 3 CCKDTLARNCYNTCRFAGGSRPVCAGACRCKIISGPKCPSDYPKLNLLPESGEPDVTQYC 182 CC+ TL RNCYN CR A G++ +CAG CRCKI SG CP +PKL L S EPD +YC Sbjct: 19 CCRSTLGRNCYNLCR-ARGAQKLCAGVCRCKISSGLSCPKGFPKLALESNSDEPDTIEYC 77 Query: 183 TIGCRNSVCNNMDNVFR-GQEMKFDMGLCSNACARFCNDGAVIQSVEA 323 +GCR+SVC+ M N +EMK + C++AC FCN A + S++A Sbjct: 78 NLGCRSSVCDYMVNAAADDEEMKLYVENCADACVSFCNGDAGLPSLDA 125
>THNB_HORVU (P21742) Beta-hordothionin precursor [Contains: Beta-hordothionin;| Acidic protein] Length = 136 Score = 117 bits (292), Expect = 9e-27 Identities = 54/108 (50%), Positives = 68/108 (62%), Gaps = 1/108 (0%) Frame = +3 Query: 3 CCKDTLARNCYNTCRFAGGSRPVCAGACRCKIISGPKCPSDYPKLNLLPESGEPDVTQYC 182 CC+ TL RNCYN CR G + +CA ACRCK+ SG KCPS +PKL L+ S EPD YC Sbjct: 30 CCRSTLGRNCYNLCRVRGAQK-LCANACRCKLTSGLKCPSSFPKLALVSNSDEPDTIDYC 88 Query: 183 TIGCRNSVCNNMDNVFR-GQEMKFDMGLCSNACARFCNDGAVIQSVEA 323 +GCR S+C+ M N +EMK + CS+AC FCN + S+ A Sbjct: 89 NLGCRASMCDYMVNAAADDEEMKLYVEHCSDACVNFCNGDVGLTSLTA 136
>THNB_WHEAT (P01543) Purothionin A-1 precursor (Purothionin A-I)| (Beta-purothionin) [Contains: Purothionin A-1; Acidic protein] Length = 136 Score = 116 bits (290), Expect = 1e-26 Identities = 53/108 (49%), Positives = 70/108 (64%), Gaps = 1/108 (0%) Frame = +3 Query: 3 CCKDTLARNCYNTCRFAGGSRPVCAGACRCKIISGPKCPSDYPKLNLLPESGEPDVTQYC 182 CCK TL RNCYN CR A G++ +CA CRCK+ SG CP D+PKL L S EPD +YC Sbjct: 30 CCKSTLGRNCYNLCR-ARGAQKLCANVCRCKLTSGLSCPKDFPKLVLESNSDEPDTMEYC 88 Query: 183 TIGCRNSVCNNMDNVFR-GQEMKFDMGLCSNACARFCNDGAVIQSVEA 323 +GCR+S+C+ + N +EMK + C +AC FCN A + S++A Sbjct: 89 NLGCRSSLCDYIVNAAADDEEMKLYVEQCGDACVNFCNADAGLTSLDA 136
>THNA_HORVU (P01545) Alpha-hordothionin precursor (Purothionin II) [Contains:| Alpha-hordothionin; Acidic protein] Length = 127 Score = 115 bits (288), Expect = 3e-26 Identities = 52/108 (48%), Positives = 68/108 (62%), Gaps = 1/108 (0%) Frame = +3 Query: 3 CCKDTLARNCYNTCRFAGGSRPVCAGACRCKIISGPKCPSDYPKLNLLPESGEPDVTQYC 182 CC+ TL RNCYN CR G + +CAG CRCK+ S KCP+ +PKL L+ S EPD +YC Sbjct: 21 CCRSTLGRNCYNLCRVRGAQK-LCAGVCRCKLTSSGKCPTGFPKLALVSNSDEPDTVKYC 79 Query: 183 TIGCRNSVCNNMDNVFR-GQEMKFDMGLCSNACARFCNDGAVIQSVEA 323 +GCR S+C+ M N +EMK + C +AC FCN A + S+ A Sbjct: 80 NLGCRASMCDYMVNAAADDEEMKLYLENCGDACVNFCNGDAGLTSLTA 127
>THN2_WHEAT (P32032) Alpha-2-purothionin precursor [Contains:| Alpha-2-purothionin; Acidic protein] Length = 136 Score = 112 bits (279), Expect = 3e-25 Identities = 51/108 (47%), Positives = 69/108 (63%), Gaps = 1/108 (0%) Frame = +3 Query: 3 CCKDTLARNCYNTCRFAGGSRPVCAGACRCKIISGPKCPSDYPKLNLLPESGEPDVTQYC 182 CC+ TL RNCYN CR + G++ +C+ CRCK+ SG CP +PKL L S EPD +YC Sbjct: 30 CCRTTLGRNCYNLCR-SRGAQKLCSTVCRCKLTSGLSCPKGFPKLALESNSDEPDTIEYC 88 Query: 183 TIGCRNSVCNNMDNVFR-GQEMKFDMGLCSNACARFCNDGAVIQSVEA 323 +GCR+SVC+ M N +EMK + C +AC FCN A + S++A Sbjct: 89 NLGCRSSVCDYMVNAAADDEEMKLYVENCGDACVNFCNGDAGLTSLDA 136
>THNB_VISAL (P08943) Viscotoxin B precursor [Contains: Viscotoxin B; Acidic| protein] (Fragment) Length = 103 Score = 82.4 bits (202), Expect = 2e-16 Identities = 41/99 (41%), Positives = 51/99 (51%) Frame = +3 Query: 3 CCKDTLARNCYNTCRFAGGSRPVCAGACRCKIISGPKCPSDYPKLNLLPESGEPDVTQYC 182 CC +T RN YNTCR GGSR CA CKIIS CPSDYPK YC Sbjct: 9 CCPNTTGRNIYNTCRLGGGSRERCASLSGCKIISASTCPSDYPKF-------------YC 55 Query: 183 TIGCRNSVCNNMDNVFRGQEMKFDMGLCSNACARFCNDG 299 T+GC++S C ++ E+ + C AC+ C+ G Sbjct: 56 TLGCQSSKCASITTP-PNSEVDAEAVRCKAACSNLCDFG 93
>THN_BRARP (Q9SBK8) Thionin precursor [Contains: Thionin; Acidic protein]| Length = 133 Score = 80.9 bits (198), Expect = 7e-16 Identities = 38/102 (37%), Positives = 55/102 (53%), Gaps = 2/102 (1%) Frame = +3 Query: 3 CCKDTLARNCYNTCRFAGGSRPVCAGACRCKIISGPKCPSDYPKLNLLPESGEPDVTQYC 182 CC T+ RN YN CR G S CA CKI+SG CP Y ++L G+ V +YC Sbjct: 27 CCPRTIDRNIYNACRLTGASMTNCANLSGCKIVSGTTCPPGYTH-DILQNYGDA-VNEYC 84 Query: 183 TIGCRNSVCNNMDNVFRGQEMKFD--MGLCSNACARFCNDGA 302 +GC +SVC + + ++ + + C+NAC+ FC G+ Sbjct: 85 KLGCASSVCGALTTLKNSMQVNCEGAVSQCTNACSNFCTKGS 126
>THN3_VISAL (P01538) Viscotoxin A3 precursor [Contains: Viscotoxin A3; Acidic| protein] Length = 111 Score = 79.7 bits (195), Expect = 2e-15 Identities = 40/98 (40%), Positives = 45/98 (45%) Frame = +3 Query: 3 CCKDTLARNCYNTCRFAGGSRPVCAGACRCKIISGPKCPSDYPKLNLLPESGEPDVTQYC 182 CC +T RN YN CR G RP CA CKIISG CPSDYPK YC Sbjct: 29 CCPNTTGRNIYNACRLTGAPRPTCAKLSGCKIISGSTCPSDYPKF-------------YC 75 Query: 183 TIGCRNSVCNNMDNVFRGQEMKFDMGLCSNACARFCND 296 T+GC +S C N + C AC+ C D Sbjct: 76 TLGCESSQCATNSN------GDAEAVRCKTACSDLCQD 107
>THN_PYRPU (P07504) Thionin| Length = 47 Score = 69.7 bits (169), Expect = 2e-12 Identities = 30/45 (66%), Positives = 33/45 (73%), Gaps = 1/45 (2%) Frame = +3 Query: 3 CCKDTLARNCYNTCRFAGG-SRPVCAGACRCKIISGPKCPSDYPK 134 CC++T ARNCYN CR G SR +CA C CKIISG CPSDYPK Sbjct: 3 CCRNTWARNCYNVCRLPGTISREICAKKCDCKIISGTTCPSDYPK 47
>THNC_VISAL (P83554) Viscotoxin C1| Length = 46 Score = 68.9 bits (167), Expect = 3e-12 Identities = 30/44 (68%), Positives = 31/44 (70%) Frame = +3 Query: 3 CCKDTLARNCYNTCRFAGGSRPVCAGACRCKIISGPKCPSDYPK 134 CC +T RN YNTCRFAGGSR CA CKIIS CPSDYPK Sbjct: 3 CCPNTTGRNIYNTCRFAGGSRERCAKLSGCKIISASTCPSDYPK 46
>THN_PHOTO (P01539) Phoratoxin| Length = 46 Score = 66.2 bits (160), Expect = 2e-11 Identities = 29/42 (69%), Positives = 30/42 (71%) Frame = +3 Query: 3 CCKDTLARNCYNTCRFAGGSRPVCAGACRCKIISGPKCPSDY 128 CC T ARN YNTCRF GGSRPVCA CKIISG KC S + Sbjct: 3 CCPTTTARNIYNTCRFGGGSRPVCAKLSGCKIISGTKCDSGW 44
>THND_HELPU (P60057) Hellethionin D| Length = 46 Score = 63.9 bits (154), Expect = 9e-11 Identities = 24/43 (55%), Positives = 30/43 (69%) Frame = +3 Query: 3 CCKDTLARNCYNTCRFAGGSRPVCAGACRCKIISGPKCPSDYP 131 CC++TLARNCYN CRF GGS+P C C C ++ CPS +P Sbjct: 3 CCRNTLARNCYNACRFTGGSQPTCGILCDCIHVTTTTCPSSHP 45
>THN5_WHEAT (Q05806) Type-5 thionin precursor [Contains: Type-5 thionin (Type V| thionin); Acidic protein] Length = 131 Score = 62.8 bits (151), Expect = 2e-10 Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 2/99 (2%) Frame = +3 Query: 30 CYNTCRFAGGSRPVCAGACRCKIISGPKCPSDYPKLNLLPESGEPDVTQYCTIGCRNSVC 209 C+N+C + CA C C++ +G L + S EP+ +YC++GCR+SVC Sbjct: 41 CFNSCLLGPSTVFQCADFCACRLPAG---------LASVRSSDEPNAIEYCSLGCRSSVC 91 Query: 210 NNMDNVFRG--QEMKFDMGLCSNACARFCNDGAVIQSVE 320 +NM N +EMK + C AC FC ++ S++ Sbjct: 92 DNMINTADNSTEEMKLYVKRCGVACDSFCKGDTLLASLD 130
>THN2_VISAL (P32880) Viscotoxin A2| Length = 46 Score = 62.0 bits (149), Expect = 3e-10 Identities = 28/43 (65%), Positives = 29/43 (67%) Frame = +3 Query: 3 CCKDTLARNCYNTCRFAGGSRPVCAGACRCKIISGPKCPSDYP 131 CC +T RN YNTCRF GGSR VCA CKIIS CPS YP Sbjct: 3 CCPNTTGRNIYNTCRFGGGSREVCASLSGCKIISASTCPS-YP 44
>THN24_ARATH (Q9C8D6) Probable thionin-2.4 precursor [Contains: Probable| thionin-2.4; Acidic protein] Length = 134 Score = 62.0 bits (149), Expect = 3e-10 Identities = 35/104 (33%), Positives = 51/104 (49%), Gaps = 3/104 (2%) Frame = +3 Query: 3 CCKDTLARNCYNTCRFAGGSRPVCAGACRCKIISGPKCPSDYPKLNLLPESGEPDVTQYC 182 CC AR YN C FA GS C C IS CP Y ++L +G+ VT+YC Sbjct: 27 CCPSIQARTFYNACLFAVGSPSSCIRNSSCLDISESTCPRGYTN-DILENTGDA-VTEYC 84 Query: 183 TIGCRNSVCNN---MDNVFRGQEMKFDMGLCSNACARFCNDGAV 305 +GC +SVC + N + + ++ C+ AC+ C G++ Sbjct: 85 KLGCVSSVCGALTILQNSDASEIVNGEVEKCTMACSTVCTKGSM 128
>THN1_VISAL (P01537) Viscotoxin 1-PS| Length = 46 Score = 60.1 bits (144), Expect = 1e-09 Identities = 26/43 (60%), Positives = 29/43 (67%) Frame = +3 Query: 3 CCKDTLARNCYNTCRFAGGSRPVCAGACRCKIISGPKCPSDYP 131 CC +T R+ Y+TCRF GGSR VCA CKIIS CPS YP Sbjct: 3 CCPBTTGRBIYBTCRFGGGSRZVCARISGCKIISASTCPS-YP 44
>THNA_PHOLI (P01540) Ligatoxin A| Length = 46 Score = 57.8 bits (138), Expect = 6e-09 Identities = 25/42 (59%), Positives = 26/42 (61%) Frame = +3 Query: 3 CCKDTLARNCYNTCRFAGGSRPVCAGACRCKIISGPKCPSDY 128 CC T ARN YNTCR G SRP CA CKIISG C S + Sbjct: 3 CCPSTTARNIYNTCRLTGTSRPTCASLSGCKIISGSTCBSGW 44
>THNB_PHOLI (P59358) Ligatoxin B| Length = 46 Score = 57.4 bits (137), Expect = 8e-09 Identities = 25/42 (59%), Positives = 26/42 (61%) Frame = +3 Query: 3 CCKDTLARNCYNTCRFAGGSRPVCAGACRCKIISGPKCPSDY 128 CC T ARN YNTCR G SR VCA CKIISG C S + Sbjct: 3 CCPSTTARNIYNTCRLTGASRSVCASLSGCKIISGSTCDSGW 44
>THN_DENCL (P01541) Denclatoxin B| Length = 46 Score = 56.6 bits (135), Expect = 1e-08 Identities = 25/42 (59%), Positives = 25/42 (59%) Frame = +3 Query: 3 CCKDTLARNCYNTCRFAGGSRPVCAGACRCKIISGPKCPSDY 128 CC T ARN YN CR G RPVCA CKIISG CP Y Sbjct: 3 CCPTTAARNQYNICRLPGTPRPVCAALSGCKIISGTGCPPGY 44
>THN22_ARATH (Q42597) Thionin-2.2 precursor [Contains: Thionin-2.2; Acidic| protein] Length = 134 Score = 52.0 bits (123), Expect = 3e-07 Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 3/103 (2%) Frame = +3 Query: 3 CCKDTLARNCYNTCRFAGGSRPVCAGACRCKIISGPKCPSDYPKLNLLPESGEPDVTQYC 182 CC R+ Y C + S+ C +CK S CP Y ++L SG+ V +YC Sbjct: 27 CCPTKDDRSVYFVCMLSVSSQFYCLLKSKCKNTSQTICPPGYTN-DILENSGDA-VNEYC 84 Query: 183 TIGCRNSVC---NNMDNVFRGQEMKFDMGLCSNACARFCNDGA 302 +GC +SVC + N + + + C+ AC+ C G+ Sbjct: 85 KLGCASSVCGALTTLQNFDTSKVLSEAVEQCTKACSSVCTGGS 127
>THN21_ARATH (Q42596) Thionin-2.1 precursor [Contains: Thionin-2.1; Acidic| protein] Length = 134 Score = 48.1 bits (113), Expect = 5e-06 Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 7/109 (6%) Frame = +3 Query: 3 CCKDTLARNCYNTCR--FAGGSRPVCAGACRCKIISGPKCPSDYPK--LNLLPESGEPDV 170 CC ARN Y+ CR F+ G RC +SG + P+ +N + E+ Sbjct: 27 CCPSNQARNGYSVCRIRFSKG---------RCMQVSGCQNSDTCPRGWVNAILENSADAT 77 Query: 171 TQYCTIGCRNSVCNNMDNVFRGQEMKFDMGL---CSNACARFCNDGAVI 308 ++C +GC SVC M+ + + G C+ C+ FC V+ Sbjct: 78 NEHCKLGCETSVCGAMNTLQNSDASEIVNGASEQCAKGCSIFCTKSYVV 126
>THN23_ARATH (Q8VZK8) Probable thionin-2.3 precursor [Contains: Probable| thionin-2.3; Acidic protein] Length = 135 Score = 45.4 bits (106), Expect = 3e-05 Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 3/103 (2%) Frame = +3 Query: 3 CCKDTLARNCYNTCRFAGGSRPVCAGACRCKIISGPKCPSDYPKLNLLPESGEPDVTQYC 182 CC R + C G + +C+ C+ CPS +P L SG+ V YC Sbjct: 28 CCPSQSTRKEFEDCISEGNLQILCSAESGCRDTYVGYCPSGFP-YGSLTNSGDV-VNVYC 85 Query: 183 TIGCRNSVC---NNMDNVFRGQEMKFDMGLCSNACARFCNDGA 302 +GC +S+C ++ + ++ + C+ AC+ C G+ Sbjct: 86 KLGCVSSLCGALTSLQKLDTSGKVNVAVERCTKACSTICTKGS 128
>CRAM_CRAAB (P01542) Crambin| Length = 46 Score = 43.5 bits (101), Expect = 1e-04 Identities = 18/42 (42%), Positives = 22/42 (52%) Frame = +3 Query: 3 CCKDTLARNCYNTCRFAGGSRPVCAGACRCKIISGPKCPSDY 128 CC +AR+ +N CR G +CA C II G CP DY Sbjct: 3 CCPSIVARSNFNVCRLPGTPEALCATYTGCIIIPGATCPGDY 44
>ROBO2_MOUSE (Q7TPD3) Roundabout homolog 2 precursor| Length = 1470 Score = 32.0 bits (71), Expect = 0.37 Identities = 16/63 (25%), Positives = 34/63 (53%) Frame = +1 Query: 160 NQMSLSTAPLDAGILSVTIWTMFSVAKK*NSTWDSAATHVPVSAMMVQSFSLLKPNHAFL 339 N ++LS P G+L + + + + ++ +++W + A HV + V+ L+PN +L Sbjct: 540 NSVTLSWQPGTPGVLPASAYIIEAFSQSVSNSWQTVANHVKTTLYTVRG---LRPNTIYL 596 Query: 340 CMI 348 M+ Sbjct: 597 FMV 599
>LAMB1_MOUSE (P02469) Laminin beta-1 chain precursor (Laminin B1 chain)| Length = 1786 Score = 31.2 bits (69), Expect = 0.63 Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 1/65 (1%) Frame = +3 Query: 75 AGACRCKI-ISGPKCPSDYPKLNLLPESGEPDVTQYCTIGCRNSVCNNMDNVFRGQEMKF 251 AG CRCK+ + G +C + + G D++ GC++ CN + + G Sbjct: 423 AGQCRCKLHVEGERCD--------VCKEGFYDLSAEDPYGCKSCACNPLGTIPGGNPCDS 474 Query: 252 DMGLC 266 + G C Sbjct: 475 ETGYC 479
>LAMB1_HUMAN (P07942) Laminin beta-1 chain precursor (Laminin B1 chain)| Length = 1786 Score = 30.4 bits (67), Expect = 1.1 Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 1/70 (1%) Frame = +3 Query: 60 SRPVCAGACRCKI-ISGPKCPSDYPKLNLLPESGEPDVTQYCTIGCRNSVCNNMDNVFRG 236 S + AG CRCK+ + G C + + G D++ GC++ CN + + G Sbjct: 418 STGLIAGQCRCKLNVEGEHCD--------VCKEGFYDLSSEDPFGCKSCACNPLGTIPGG 469 Query: 237 QEMKFDMGLC 266 + G C Sbjct: 470 NPCDSETGHC 479
>ROBO2_HUMAN (Q9HCK4) Roundabout homolog 2 precursor| Length = 1378 Score = 30.4 bits (67), Expect = 1.1 Identities = 16/63 (25%), Positives = 33/63 (52%) Frame = +1 Query: 160 NQMSLSTAPLDAGILSVTIWTMFSVAKK*NSTWDSAATHVPVSAMMVQSFSLLKPNHAFL 339 N ++LS P G L + + + + ++ +++W + A HV + V+ L+PN +L Sbjct: 536 NSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVANHVKTTLYTVRG---LRPNTIYL 592 Query: 340 CMI 348 M+ Sbjct: 593 FMV 595
>NOTCH_XENLA (P21783) Neurogenic locus notch protein homolog precursor (XOTCH| protein) Length = 2524 Score = 29.3 bits (64), Expect = 2.4 Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 2/101 (1%) Frame = +3 Query: 6 CKDTLARNCYNTCRFAGGSRP-VCAGACRCKII-SGPKCPSDYPKLNLLPESGEPDVTQY 179 C++ + N CR G V C+C +G C D + L+P + + T + Sbjct: 253 CEENIDDCPSNNCRNGGTCVDGVNTYNCQCPPDWTGQYCTEDVDECQLMPNACQNGGTCH 312 Query: 180 CTIGCRNSVCNNMDNVFRGQEMKFDMGLCSNACARFCNDGA 302 T G N VC N + G++ ++ C+NA C+ GA Sbjct: 313 NTYGGYNCVC---VNGWTGEDCSENIDDCANAA---CHSGA 347
>ACL7A_HUMAN (Q9Y615) Actin-like protein 7A (Actin-like-7-alpha) (Actin-like 7A)| Length = 435 Score = 28.9 bits (63), Expect = 3.1 Identities = 15/49 (30%), Positives = 22/49 (44%) Frame = +3 Query: 6 CKDTLARNCYNTCRFAGGSRPVCAGACRCKIISGPKCPSDYPKLNLLPE 152 C L R+ GGS + R + CP+D P++N+LPE Sbjct: 346 CDIALKRDLMGNILLCGGSTMLSGFPNRLQKELSSMCPNDTPQVNVLPE 394
>SUIS_RABIT (P07768) Sucrase-isomaltase, intestinal [Contains: Sucrase (EC| 3.2.1.48); Isomaltase (EC 3.2.1.10)] Length = 1826 Score = 28.5 bits (62), Expect = 4.1 Identities = 14/47 (29%), Positives = 24/47 (51%) Frame = -2 Query: 363 DLGHRNHAQEGMIRLQQTE*LHHHCRNGHMRCCRVPCRISFLGHGKH 223 D+G R Q+ + + ++ H R GH+ C+ P R +FL K+ Sbjct: 1663 DIGIRGQVQDLTLLMNA---INLHVRGGHILPCQEPARTTFLSRQKY 1706
>HMCT_BOMMO (P98092) Hemocytin precursor (Humoral lectin)| Length = 3133 Score = 28.5 bits (62), Expect = 4.1 Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 1/30 (3%) Frame = +3 Query: 6 CKDTLARNCYNTCRFAGGS-RPVCAGACRC 92 C D+ R C +T A G +PVC C C Sbjct: 49 CADSCLRKCSDTALAASGQCKPVCVEGCAC 78
>CRIM1_BRARE (Q7T3Q2) Cysteine-rich motor neuron 1 protein precursor (CRIM-1)| Length = 1027 Score = 28.5 bits (62), Expect = 4.1 Identities = 23/84 (27%), Positives = 29/84 (34%), Gaps = 16/84 (19%) Frame = +3 Query: 6 CKDTLARNCYNTCRFAGGS------------RPVCAGACRCKIISGPKCPSDYPKLNLLP 149 C+ R C N FA RP C+ A RC++ P+CP D + Sbjct: 134 CECDSVRTCNNPFEFASQEACQTALQKIEEERPDCSKA-RCEVQFSPRCPEDSILIEGYA 192 Query: 150 ESGE----PDVTQYCTIGCRNSVC 209 GE P GC VC Sbjct: 193 PPGECCPLPSRCVCSPAGCLRKVC 216
>FRAS1_HUMAN (Q86XX4) Extracellular matrix protein FRAS1 precursor| Length = 4007 Score = 28.1 bits (61), Expect = 5.4 Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 8/59 (13%) Frame = -2 Query: 291 CRNGHMRCCRVPC--------RISFLGHGKHCPYCYRQNSCIQWCSTE*HLVHRIQGED 139 C +G +RC PC ++F+ G CP C + CS E H+ GED Sbjct: 118 CNHGEVRCTPQPCPPLSCGHQELAFIPEGSCCPVCVGLG---KPCSYEGHVFQ--DGED 171
>MT1C_SHEEP (P09578) Metallothionein-1C (MT-1C) (Metallothionein-IC) (MT-IC)| Length = 61 Score = 28.1 bits (61), Expect = 5.4 Identities = 11/25 (44%), Positives = 13/25 (52%) Frame = +3 Query: 42 CRFAGGSRPVCAGACRCKIISGPKC 116 C + GS CAG+C CK P C Sbjct: 5 CSCSTGSSCSCAGSCTCKACRCPSC 29
>ACL7A_MOUSE (Q9QY84) Actin-like protein 7A (Actin-like-7-alpha) (Actin-like 7A)| (T-actin-2) (Testis-specific actin-2) Length = 440 Score = 28.1 bits (61), Expect = 5.4 Identities = 15/49 (30%), Positives = 22/49 (44%) Frame = +3 Query: 6 CKDTLARNCYNTCRFAGGSRPVCAGACRCKIISGPKCPSDYPKLNLLPE 152 C L R+ GGS + R + CP+D P++N+LPE Sbjct: 351 CDIALKRDLMGNILLCGGSTMLRGFPNRLQKELSSMCPNDTPQVNVLPE 399
>PCSK5_HUMAN (Q92824) Proprotein convertase subtilisin/kexin type 5 precursor| (EC 3.4.21.-) (Proprotein convertase PC5) (Subtilisin/kexin-like protease PC5) (PC6) (hPC6) Length = 913 Score = 28.1 bits (61), Expect = 5.4 Identities = 14/47 (29%), Positives = 16/47 (34%), Gaps = 7/47 (14%) Frame = -2 Query: 300 HHHCRNGHMRCCRVPCRISFLGHGKHCPYC-------YRQNSCIQWC 181 H+H R C C F HG C C NSC+ C Sbjct: 678 HYHADKKRCRKCAPNCESCFGSHGDQCMSCKYGYFLNEETNSCVTHC 724
>GSHI_MOUSE (P31315) Homeobox protein GSH-1| Length = 261 Score = 28.1 bits (61), Expect = 5.4 Identities = 14/39 (35%), Positives = 18/39 (46%) Frame = +3 Query: 51 AGGSRPVCAGACRCKIISGPKCPSDYPKLNLLPESGEPD 167 AGG P C+C +S KC D +L + P S D Sbjct: 218 AGGGAPQ---GCKCSSLSSAKCSEDDDELPMSPSSSGKD 253
>O52B4_HUMAN (Q8NGK2) Olfactory receptor 52B4 (Olfactory receptor OR11-3)| Length = 314 Score = 28.1 bits (61), Expect = 5.4 Identities = 12/23 (52%), Positives = 17/23 (73%) Frame = +1 Query: 310 SLLKPNHAFLCMISMAKVVLSFC 378 SL +P + FLCM++ A +VLS C Sbjct: 56 SLHEPMYLFLCMLAGADIVLSTC 78
>MT1_BOVIN (P58280) Metallothionein-1 (MT-1) (Metallothionein-I) (MT-I)| Length = 61 Score = 27.7 bits (60), Expect = 7.0 Identities = 10/25 (40%), Positives = 12/25 (48%) Frame = +3 Query: 42 CRFAGGSRPVCAGACRCKIISGPKC 116 C G CAG+C+CK P C Sbjct: 5 CSCPTGGSCTCAGSCKCKACRCPSC 29
>GSHI_HUMAN (Q9H4S2) Homeobox protein GSH-1| Length = 264 Score = 27.7 bits (60), Expect = 7.0 Identities = 14/38 (36%), Positives = 18/38 (47%) Frame = +3 Query: 54 GGSRPVCAGACRCKIISGPKCPSDYPKLNLLPESGEPD 167 GGS P C+C +S KC D +L + P S D Sbjct: 222 GGSAPQ---GCKCASLSSAKCSEDDDELPMSPSSSGKD 256
>TRME_PROMP (Q7V395) tRNA modification GTPase trmE| Length = 460 Score = 27.7 bits (60), Expect = 7.0 Identities = 15/42 (35%), Positives = 20/42 (47%) Frame = -3 Query: 323 GFNRLNDCTIIAETGTCVAAESHVEFHFLATENIVHIVTDRI 198 G +N C I ET + A ESH FH +N+ + D I Sbjct: 32 GEEAINSCKNIVETKSKYAWESHRVFHGFIKDNLENKFIDEI 73
>YFGD_ECOLI (P76569) Protein yfgD| Length = 119 Score = 27.7 bits (60), Expect = 7.0 Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%) Frame = +3 Query: 93 KIISGPKCPSDYPKLNLLPESG-EPDVTQY 179 KI P+C LNLL E+G EP+V Y Sbjct: 6 KIYHNPRCSKSRETLNLLKENGVEPEVVLY 35
>NUP88_DROME (Q9GYU8) Nuclear pore complex protein Nup88 (Nucleoporin Nup88) (88| kDa nuclear pore complex protein) (dNup88) (Protein members only) Length = 702 Score = 27.7 bits (60), Expect = 7.0 Identities = 11/41 (26%), Positives = 24/41 (58%) Frame = -3 Query: 308 NDCTIIAETGTCVAAESHVEFHFLATENIVHIVTDRIPASN 186 + C ++ + +AA+ +++F L ++V + DR+ ASN Sbjct: 46 DSCLLVRNWRSSLAAKVNIQFQTLIPSSLVSLEVDRVLASN 86
>PLMN_BOVIN (P06868) Plasminogen precursor (EC 3.4.21.7) [Contains: Plasmin| heavy chain A; Activation peptide; Plasmin heavy chain A, short form; Plasmin light chain B] Length = 812 Score = 27.7 bits (60), Expect = 7.0 Identities = 12/36 (33%), Positives = 18/36 (50%) Frame = -2 Query: 291 CRNGHMRCCRVPCRISFLGHGKHCPYCYRQNSCIQW 184 C+N CR P +G+ P+CY NS ++W Sbjct: 323 CKNLEENYCRNP-------NGEKAPWCYTTNSEVRW 351
>NOTC1_MOUSE (Q01705) Neurogenic locus notch homolog protein 1 precursor (Notch| 1) (Motch A) (mT14) (p300) [Contains: Notch 1 extracellular truncation; Notch 1 intracellular domain] Length = 2531 Score = 27.7 bits (60), Expect = 7.0 Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 1/74 (1%) Frame = +3 Query: 84 CRCKI-ISGPKCPSDYPKLNLLPESGEPDVTQYCTIGCRNSVCNNMDNVFRGQEMKFDMG 260 CRC ++G C D + L+P + + T + T G N VC N + G++ ++ Sbjct: 281 CRCPPEVTGQYCTEDVDECQLMPNACQNAGTCHNTHGGYNCVC---VNGWTGEDCSENID 337 Query: 261 LCSNACARFCNDGA 302 C++A C GA Sbjct: 338 DCASAA---CFQGA 348
>DTD_LACLA (Q9CJ92) D-tyrosyl-tRNA(Tyr) deacylase (EC 3.1.-.-)| Length = 151 Score = 27.7 bits (60), Expect = 7.0 Identities = 18/58 (31%), Positives = 32/58 (55%) Frame = +1 Query: 139 IFSLNPVNQMSLSTAPLDAGILSVTIWTMFSVAKK*NSTWDSAATHVPVSAMMVQSFS 312 IFS + ++M+LS + ILS++ +T+++ KK N SAA + M + F+ Sbjct: 54 IFS-DEADKMNLSVQDIQGEILSISQFTLYAETKKGNRPSFSAAGKPDFAKAMYEKFN 110
>SFP4_BOVIN (P81019) Seminal plasma protein BSP-30 kDa precursor (BSP-30K)| Length = 183 Score = 27.3 bits (59), Expect = 9.1 Identities = 11/28 (39%), Positives = 14/28 (50%) Frame = -2 Query: 255 CRISFLGHGKHCPYCYRQNSCIQWCSTE 172 C F GK C R+NS + WCS + Sbjct: 97 CAFPFTYKGKKYYMCTRKNSVLLWCSLD 124
>TRI26_PANTR (Q7YR34) Tripartite motif protein 26 (Zinc finger protein 173)| Length = 539 Score = 27.3 bits (59), Expect = 9.1 Identities = 15/48 (31%), Positives = 18/48 (37%) Frame = +3 Query: 6 CKDTLARNCYNTCRFAGGSRPVCAGACRCKIISGPKCPSDYPKLNLLP 149 C R+C R GSRPVC P C + K N+ P Sbjct: 31 CGHVFCRSCTTDVRPISGSRPVC-----------PLCKKPFKKENIRP 67
>TRI26_HUMAN (Q12899) Tripartite motif protein 26 (Zinc finger protein 173)| (Acid finger protein) (AFP) (RING finger protein 95) Length = 539 Score = 27.3 bits (59), Expect = 9.1 Identities = 15/48 (31%), Positives = 18/48 (37%) Frame = +3 Query: 6 CKDTLARNCYNTCRFAGGSRPVCAGACRCKIISGPKCPSDYPKLNLLP 149 C R+C R GSRPVC P C + K N+ P Sbjct: 31 CGHVFCRSCTTDVRPISGSRPVC-----------PLCKKPFKKENIRP 67
>SCX9_CENLL (Q8WRY4) Sodium-channel modifier neurotoxin Cll9 precursor| Length = 84 Score = 27.3 bits (59), Expect = 9.1 Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 1/36 (2%) Frame = +3 Query: 3 CCKDTLARNCYNTCRFAGGSRPVCA-GACRCKIISG 107 C T +NC C+ GGS C+ AC CK + G Sbjct: 35 CIDKTGDKNCDRNCKKEGGSFGHCSYSACWCKGLPG 70
>FRAS1_MOUSE (Q80T14) Extracellular matrix protein FRAS1 precursor| Length = 4010 Score = 27.3 bits (59), Expect = 9.1 Identities = 23/102 (22%), Positives = 35/102 (34%), Gaps = 1/102 (0%) Frame = +3 Query: 30 CYNTCRFAGGSRPVCAGACRCKIISGPKCPSDYPKLNLLPESGEPDVTQYCTIGCRNSVC 209 C +C+ G S P C I+ KC S+ P +G V C Sbjct: 560 CDQSCKSCGPSSPRCLSCAEKTILHDGKCISECPHGYYADSTGSCKVCHSSCASCSGPTA 619 Query: 210 NNMDNVFRGQEMKFDMGLCSNACAR-FCNDGAVIQSVEA*SC 332 + Q ++ G C +C F D + ++ A SC Sbjct: 620 AHCIACIHPQTLR--QGHCLPSCGEGFYPDHGICEACHA-SC 658
>CXI_CONST (P69499) I-superfamily conotoxin precursor| Length = 68 Score = 27.3 bits (59), Expect = 9.1 Identities = 14/39 (35%), Positives = 16/39 (41%) Frame = +3 Query: 18 LARNCYNTCRFAGGSRPVCAGACRCKIISGPKCPSDYPK 134 L R C R+ RP C G C C + P C Y K Sbjct: 25 LTRRCVPPSRYCTRHRPCCRGTC-CSGLCRPMCNLWYGK 62
>5HT1A_PONPY (Q9N296) 5-hydroxytryptamine 1A receptor (5-HT-1A) (Serotonin| receptor 1A) (5-HT1A) Length = 422 Score = 27.3 bits (59), Expect = 9.1 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = +3 Query: 234 GQEMKFDMGLCSNACARFCNDGAVIQSVE 320 G E K GLC+N R +DGA ++ +E Sbjct: 266 GVESKAGGGLCANGAVRQGDDGAALEVIE 294 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 55,353,941 Number of Sequences: 219361 Number of extensions: 1141359 Number of successful extensions: 2969 Number of sequences better than 10.0: 58 Number of HSP's better than 10.0 without gapping: 2800 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2945 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 1391514312 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
