ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags5a24 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT019097.1| Zea mays clone Contig696.F mRNA sequence Length = 969 Score = 488 bits (246), Expect = e-134 Identities = 537/634 (84%) Strand = Plus / Plus Query: 2 caccaacgacctcgacctcgacgccgacggcaacgtctacttcaccgacagcagcgtcct 61 ||||||||||||||| ||||||| ||| ||||| || |||||||| ||| |||| ||| Sbjct: 134 caccaacgacctcgatctcgacgacgagggcaatgtgtacttcacggactccagcatcca 193 Query: 62 ctaccagagaaggcatttcatgcagttggttttctctggagatgcctctgggaggctctt 121 |||||||||| || ||||||||||||| |||||||| || ||| |||||||||| || | Sbjct: 194 ctaccagagacggaatttcatgcagttagttttctcgggggatccctctgggagacttct 253 Query: 122 gaaatacaatccacaaacaaaggaaacaacagtccttcaccgcaacctccaatttcccaa 181 |||||| || ||||| ||||||||||| ||||| || || |||||||||||||||||||| Sbjct: 254 gaaatataacccacagacaaaggaaacgacagtactgcatcgcaacctccaatttcccaa 313 Query: 182 tggagtgagcttaagcaaggacggttcattcttcgtcttctgtgaaggatctcgtggaag 241 || ||| | | |||||||| || |||||||| || |||||||||||||| || || || Sbjct: 314 cggtgtgtccatgagcaaggatggctcattctttgttttctgtgaaggatcacgcggcag 373 Query: 242 gttgagcagatactggctgaaaggtgagaaggcaggaaccgtcgatctcttcgccatcct 301 |||||||||||||||| ||||||| ||||||||||| || || ||||| ||||| ||| | Sbjct: 374 gttgagcagatactggttgaaaggcgagaaggcaggcactgtggatcttttcgctatctt 433 Query: 302 gcctgggttcccggacaacgtgaggaccaacgacaagggcgaattctgggtagcaatcca 361 |||||| ||||| ||||| ||| | || || || |||||||| |||||||| |||||||| Sbjct: 434 gcctggcttcccagacaatgtgcgaacgaatgagaagggcgagttctgggtggcaatcca 493 Query: 362 ttgccggcgcagcgcatacgcccggctcttgagtcaccgcgtgcagctgaggaagttctt 421 ||||| || | ||||||||||| |||| | || || ||||||||||||| || Sbjct: 494 ctgccgccgaggtctgtacgcccggcttatgagccgccatgtcaagctgaggaagttttt 553 Query: 422 gctcagcctcccgatccccgccaagtaccactacctgatgcagatcggcggcaacctgca 481 |||||||||||||||||||||||||||||||||||||||||||||||| |||| || || Sbjct: 554 gctcagcctcccgatccccgccaagtaccactacctgatgcagatcggtggcaggctcca 613 Query: 482 cgcgctgatcatcaagtacagccccgagggcgaggtgctcgacatcttggaggacactaa 541 |||||| ||||||||||||||||| |||||| ||||||| ||||||||||||||||| || Sbjct: 614 cgcgctcatcatcaagtacagcccagagggccaggtgcttgacatcttggaggacaccaa 673 Query: 542 agggcaggtggtgagagccgtaagcgaggtggaggagaaggatggcaagctttggatagg 601 || |||||||||||||||| ||||| |||||||||||||| || ||||| |||||||| Sbjct: 674 gggcgaggtggtgagagccgtcagcgaagtggaggagaaggacgggaagctctggatagg 733 Query: 602 atccgttctcatgcccttcattgccgtctttgac 635 ||||| || ||||| ||||| || ||||||||| Sbjct: 734 gtccgtcctgatgccgttcatcgctgtctttgac 767
>gb|AY104488.1| Zea mays PCO139959 mRNA sequence Length = 1603 Score = 472 bits (238), Expect = e-130 Identities = 535/634 (84%) Strand = Plus / Plus Query: 2 caccaacgacctcgacctcgacgccgacggcaacgtctacttcaccgacagcagcgtcct 61 ||||||||||||||| ||||||| ||| ||||| || |||||||| ||| |||| ||| Sbjct: 710 caccaacgacctcgatctcgacgacgagggcaatgtgtacttcacggactccagcatcca 769 Query: 62 ctaccagagaaggcatttcatgcagttggttttctctggagatgcctctgggaggctctt 121 |||||||||| || ||||||||||||| |||||||| || ||| |||||||||| || | Sbjct: 770 ctaccagagacggaatttcatgcagttagttttctcgggggatccctctgggagacttct 829 Query: 122 gaaatacaatccacaaacaaaggaaacaacagtccttcaccgcaacctccaatttcccaa 181 |||||| || ||||| ||||||||||| ||||| || || |||||||||||||||||||| Sbjct: 830 gaaatataacccacagacaaaggaaacgacagtactgcatcgcaacctccaatttcccaa 889 Query: 182 tggagtgagcttaagcaaggacggttcattcttcgtcttctgtgaaggatctcgtggaag 241 || ||| | | |||||||| || |||||||| || ||||| |||||||| ||||| || Sbjct: 890 cggtgtgtccatgagcaaggatggctcattctttgttttctgcgaaggatcgcgtggcag 949 Query: 242 gttgagcagatactggctgaaaggtgagaaggcaggaaccgtcgatctcttcgccatcct 301 |||||||||||||||| ||||||| ||||||||||| || || ||||| ||||| ||| | Sbjct: 950 gttgagcagatactggttgaaaggcgagaaggcaggcactgtggatcttttcgctatctt 1009 Query: 302 gcctgggttcccggacaacgtgaggaccaacgacaagggcgaattctgggtagcaatcca 361 |||||| ||||| ||||| ||||| || || || |||||||| |||||||| |||||||| Sbjct: 1010 gcctggcttcccagacaatgtgagaacgaatgagaagggcgagttctgggtggcaatcca 1069 Query: 362 ttgccggcgcagcgcatacgcccggctcttgagtcaccgcgtgcagctgaggaagttctt 421 ||||| || | ||||||||||| |||| | || || ||||||||||||| || Sbjct: 1070 ctgccgccgaggtctgtacgcccggcttatgagccgccatgtcaagctgaggaagttttt 1129 Query: 422 gctcagcctcccgatccccgccaagtaccactacctgatgcagatcggcggcaacctgca 481 |||||||||||||||||||||||||||||||||||||||||||||||| |||| || || Sbjct: 1130 gctcagcctcccgatccccgccaagtaccactacctgatgcagatcggtggcaggctcca 1189 Query: 482 cgcgctgatcatcaagtacagccccgagggcgaggtgctcgacatcttggaggacactaa 541 |||| | ||||||||||||||||| |||||| ||||||| ||||||||||||||||| || Sbjct: 1190 cgcggtcatcatcaagtacagcccagagggccaggtgcttgacatcttggaggacaccaa 1249 Query: 542 agggcaggtggtgagagccgtaagcgaggtggaggagaaggatggcaagctttggatagg 601 || |||||||||||||||| ||||| ||||||||||| || || ||||| |||||||| Sbjct: 1250 gggcgaggtggtgagagccgtcagcgaagtggaggagaaagacgggaagctctggatagg 1309 Query: 602 atccgttctcatgcccttcattgccgtctttgac 635 || || || ||||| ||||| || ||||||||| Sbjct: 1310 gtctgtcctgatgccgttcatcgctgtctttgac 1343
>gb|BT018847.1| Zea mays clone EL01N0555B09.d mRNA sequence Length = 1568 Score = 448 bits (226), Expect = e-122 Identities = 532/634 (83%) Strand = Plus / Plus Query: 2 caccaacgacctcgacctcgacgccgacggcaacgtctacttcaccgacagcagcgtcct 61 ||||||||||||||| ||||||| ||| ||||| || |||||||| ||| |||| ||| Sbjct: 662 caccaacgacctcgatctcgacgacgagggcaatgtgtacttcacggactccagcatcca 721 Query: 62 ctaccagagaaggcatttcatgcagttggttttctctggagatgcctctgggaggctctt 121 |||||||||| || ||||||||||||| |||||||| || ||| |||||||||| || | Sbjct: 722 ctaccagagacggaatttcatgcagttagttttctcgggggatccctctgggagacttct 781 Query: 122 gaaatacaatccacaaacaaaggaaacaacagtccttcaccgcaacctccaatttcccaa 181 |||||| || ||||| ||||||||||| ||||| || || ||||||||||||||| || | Sbjct: 782 gaaatataacccacagacaaaggaaacgacagtactgcatcgcaacctccaattttccca 841 Query: 182 tggagtgagcttaagcaaggacggttcattcttcgtcttctgtgaaggatctcgtggaag 241 || ||| | | |||||||| || ||||||| | | |||||||||||||| || || || Sbjct: 842 cggtgtgtccatgagcaaggatggctcattctcccttttctgtgaaggatcacgcggcag 901 Query: 242 gttgagcagatactggctgaaaggtgagaaggcaggaaccgtcgatctcttcgccatcct 301 ||||||||||||| | ||||||| ||||||||||| || || ||||| ||||| ||| | Sbjct: 902 gttgagcagataccgtttgaaaggcgagaaggcaggcactgtggatcttttcgctatctt 961 Query: 302 gcctgggttcccggacaacgtgaggaccaacgacaagggcgaattctgggtagcaatcca 361 |||||| ||||| ||||| ||| | || || || |||||||| |||||||| |||||||| Sbjct: 962 gcctggcttcccagacaatgtgcgaacgaatgagaagggcgagttctgggtggcaatcca 1021 Query: 362 ttgccggcgcagcgcatacgcccggctcttgagtcaccgcgtgcagctgaggaagttctt 421 ||||| || | ||||||||||| |||| | || || ||||||||||||| || Sbjct: 1022 ctgccgccgaggtctgtacgcccggcttatgagccgccatgtcaagctgaggaagttttt 1081 Query: 422 gctcagcctcccgatccccgccaagtaccactacctgatgcagatcggcggcaacctgca 481 |||||||||||||||||||||||||||||||||||||||||||||||| |||| || || Sbjct: 1082 gctcagcctcccgatccccgccaagtaccactacctgatgcagatcggtggcaggctcca 1141 Query: 482 cgcgctgatcatcaagtacagccccgagggcgaggtgctcgacatcttggaggacactaa 541 |||||| ||||||||||||||||| |||||| ||||||| ||||||||||||||||| || Sbjct: 1142 cgcgctcatcatcaagtacagcccagagggccaggtgcttgacatcttggaggacaccaa 1201 Query: 542 agggcaggtggtgagagccgtaagcgaggtggaggagaaggatggcaagctttggatagg 601 || |||||||||||||||| ||||| |||||||||||||| || ||||| |||||||| Sbjct: 1202 gggcgaggtggtgagagccgtcagcgaagtggaggagaaggacgggaagctctggatagg 1261 Query: 602 atccgttctcatgcccttcattgccgtctttgac 635 ||||| || ||||| ||||| || ||||||||| Sbjct: 1262 gtccgtcctgatgccgttcatcgctgtctttgac 1295
>ref|XM_469768.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1724 Score = 381 bits (192), Expect = e-102 Identities = 336/384 (87%) Strand = Plus / Plus Query: 2 caccaacgacctcgacctcgacgccgacggcaacgtctacttcaccgacagcagcgtcct 61 ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||| Sbjct: 792 caccaacgacctcgacctcgacgacgacggcaacgtctacttcactgacagcagcatcca 851 Query: 62 ctaccagagaaggcatttcatgcagttggttttctctggagatgcctctgggaggctctt 121 |||||||||| ||||||||||||| |||||||||||||||||| |||| |||||||| | Sbjct: 852 ctaccagagacggcatttcatgcaattggttttctctggagatccctcagggaggcttct 911 Query: 122 gaaatacaatccacaaacaaaggaaacaacagtccttcaccgcaacctccaatttcccaa 181 ||||||| | || | |||||| || ||||||| || ||||||||| | || ||||| || Sbjct: 912 gaaatacgacccgaacacaaagaaagcaacagttctccaccgcaacattcagtttccgaa 971 Query: 182 tggagtgagcttaagcaaggacggttcattcttcgtcttctgtgaaggatctcgtggaag 241 ||| ||| | | |||||||| || | |||||||||||||| |||||||| ||||| || Sbjct: 972 tggggtgtccatgagcaaggatggcttgttcttcgtcttctgcgaaggatcccgtggcag 1031 Query: 242 gttgagcagatactggctgaaaggtgagaaggcaggaaccgtcgatctcttcgccatcct 301 |||||| |||||||||||||||| |||||||| |||||||| ||||| ||||||||||| Sbjct: 1032 attgagccgatactggctgaaaggggagaaggctggaaccgtggatcttttcgccatcct 1091 Query: 302 gcctgggttcccggacaacgtgaggaccaacgacaagggcgaattctgggtagcaatcca 361 ||||||||| || ||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 1092 gcctgggtttccagacaatgtgaggaccaacgacaagggtgaattctgggtagcaatcca 1151 Query: 362 ttgccggcgcagcgcatacgcccg 385 |||| |||||||| ||||||||| Sbjct: 1152 ttgcaggcgcagcatatacgcccg 1175 Score = 295 bits (149), Expect = 9e-77 Identities = 206/225 (91%) Strand = Plus / Plus Query: 407 gctgaggaagttcttgctcagcctcccgatccccgccaagtaccactacctgatgcagat 466 ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 1197 gctgaggaagttcttgctcagcctcccaatccctgccaagtaccactacctgatgcagat 1256 Query: 467 cggcggcaacctgcacgcgctgatcatcaagtacagccccgagggcgaggtgctcgacat 526 ||||||||| || ||||| |||||||||||||||| |||||| ||||||||||| ||||| Sbjct: 1257 cggcggcaagctccacgctctgatcatcaagtacaaccccgaaggcgaggtgcttgacat 1316 Query: 527 cttggaggacactaaagggcaggtggtgagagccgtaagcgaggtggaggagaaggatgg 586 ||||||||| || | |||||||||||| |||||||| || || || |||||||||||||| Sbjct: 1317 cttggaggataccacagggcaggtggtaagagccgttagtgaagttgaggagaaggatgg 1376 Query: 587 caagctttggataggatccgttctcatgcccttcattgccgtctt 631 ||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 1377 gaagctctggataggatccgttctgatgcccttcattgccgtctt 1421
>dbj|AK099001.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013102B14, full insert sequence Length = 1570 Score = 381 bits (192), Expect = e-102 Identities = 336/384 (87%) Strand = Plus / Plus Query: 2 caccaacgacctcgacctcgacgccgacggcaacgtctacttcaccgacagcagcgtcct 61 ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||| Sbjct: 745 caccaacgacctcgacctcgacgacgacggcaacgtctacttcactgacagcagcatcca 804 Query: 62 ctaccagagaaggcatttcatgcagttggttttctctggagatgcctctgggaggctctt 121 |||||||||| ||||||||||||| |||||||||||||||||| |||| |||||||| | Sbjct: 805 ctaccagagacggcatttcatgcaattggttttctctggagatccctcagggaggcttct 864 Query: 122 gaaatacaatccacaaacaaaggaaacaacagtccttcaccgcaacctccaatttcccaa 181 ||||||| | || | |||||| || ||||||| || ||||||||| | || ||||| || Sbjct: 865 gaaatacgacccgaacacaaagaaagcaacagttctccaccgcaacattcagtttccgaa 924 Query: 182 tggagtgagcttaagcaaggacggttcattcttcgtcttctgtgaaggatctcgtggaag 241 ||| ||| | | |||||||| || | |||||||||||||| |||||||| ||||| || Sbjct: 925 tggggtgtccatgagcaaggatggcttgttcttcgtcttctgcgaaggatcccgtggcag 984 Query: 242 gttgagcagatactggctgaaaggtgagaaggcaggaaccgtcgatctcttcgccatcct 301 |||||| |||||||||||||||| |||||||| |||||||| ||||| ||||||||||| Sbjct: 985 attgagccgatactggctgaaaggggagaaggctggaaccgtggatcttttcgccatcct 1044 Query: 302 gcctgggttcccggacaacgtgaggaccaacgacaagggcgaattctgggtagcaatcca 361 ||||||||| || ||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 1045 gcctgggtttccagacaatgtgaggaccaacgacaagggtgaattctgggtagcaatcca 1104 Query: 362 ttgccggcgcagcgcatacgcccg 385 |||| |||||||| ||||||||| Sbjct: 1105 ttgcaggcgcagcatatacgcccg 1128 Score = 295 bits (149), Expect = 9e-77 Identities = 206/225 (91%) Strand = Plus / Plus Query: 407 gctgaggaagttcttgctcagcctcccgatccccgccaagtaccactacctgatgcagat 466 ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 1150 gctgaggaagttcttgctcagcctcccaatccctgccaagtaccactacctgatgcagat 1209 Query: 467 cggcggcaacctgcacgcgctgatcatcaagtacagccccgagggcgaggtgctcgacat 526 ||||||||| || ||||| |||||||||||||||| |||||| ||||||||||| ||||| Sbjct: 1210 cggcggcaagctccacgctctgatcatcaagtacaaccccgaaggcgaggtgcttgacat 1269 Query: 527 cttggaggacactaaagggcaggtggtgagagccgtaagcgaggtggaggagaaggatgg 586 ||||||||| || | |||||||||||| |||||||| || || || |||||||||||||| Sbjct: 1270 cttggaggataccacagggcaggtggtaagagccgttagtgaagttgaggagaaggatgg 1329 Query: 587 caagctttggataggatccgttctcatgcccttcattgccgtctt 631 ||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 1330 gaagctctggataggatccgttctgatgcccttcattgccgtctt 1374
>dbj|AK111876.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046K17, full insert sequence Length = 1571 Score = 359 bits (181), Expect = 7e-96 Identities = 335/385 (87%), Gaps = 1/385 (0%) Strand = Plus / Plus Query: 2 caccaacgacctcgacctcgacgccgacggcaacgtctacttcaccgacagcagcgtcct 61 ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||| Sbjct: 731 caccaacgacctcgacctcgacgacgacggcaacgtctacttcactgacagcagcatcca 790 Query: 62 ctaccagagaaggcatttcatgcagttggttttctctggagatgcctctgggaggctctt 121 |||||||||| ||||||||||||| |||||||||||||||||| |||| |||||||| | Sbjct: 791 ctaccagagacggcatttcatgcaattggttttctctggagatccctcagggaggcttct 850 Query: 122 gaaatacaatccacaaacaaaggaaacaacagtccttcaccgcaacctccaatttcccaa 181 ||||||| | || | |||||| || ||||||| || ||||||||| | || ||||| || Sbjct: 851 gaaatacgacccgaacacaaagaaagcaacagttctccaccgcaacattcagtttccgaa 910 Query: 182 tggagtgagcttaagcaaggacggttcattcttcgtcttctgtgaaggatctcgtggaag 241 ||| ||| | | |||||||| || | |||||||||||||| || ||||| ||||| || Sbjct: 911 tggggtgtccatgagcaaggatggcttgttcttcgtcttctgcgagggatcccgtggcag 970 Query: 242 gttgagcagatactggctgaaaggtgagaaggcaggaaccgtcgatctcttcgccatcct 301 |||||| |||||||||||||||| |||||||| |||||||| ||||| ||||||||||| Sbjct: 971 attgagccgatactggctgaaaggggagaaggctggaaccgtggatcttttcgccatcct 1030 Query: 302 gcctggg-ttcccggacaacgtgaggaccaacgacaagggcgaattctgggtagcaatcc 360 ||||||| || || ||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct: 1031 gcctgggttttccagacaatgtgaggaccaacgacaagggtgaattctgggtagcaatcc 1090 Query: 361 attgccggcgcagcgcatacgcccg 385 ||||| |||||||| ||||||||| Sbjct: 1091 attgcaggcgcagcatatacgcccg 1115 Score = 295 bits (149), Expect = 9e-77 Identities = 206/225 (91%) Strand = Plus / Plus Query: 407 gctgaggaagttcttgctcagcctcccgatccccgccaagtaccactacctgatgcagat 466 ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 1137 gctgaggaagttcttgctcagcctcccaatccctgccaagtaccactacctgatgcagat 1196 Query: 467 cggcggcaacctgcacgcgctgatcatcaagtacagccccgagggcgaggtgctcgacat 526 ||||||||| || ||||| |||||||||||||||| |||||| ||||||||||| ||||| Sbjct: 1197 cggcggcaagctccacgctctgatcatcaagtacaaccccgaaggcgaggtgcttgacat 1256 Query: 527 cttggaggacactaaagggcaggtggtgagagccgtaagcgaggtggaggagaaggatgg 586 ||||||||| || | |||||||||||| |||||||| || || || |||||||||||||| Sbjct: 1257 cttggaggataccacagggcaggtggtaagagccgttagtgaagttgaggagaaggatgg 1316 Query: 587 caagctttggataggatccgttctcatgcccttcattgccgtctt 631 ||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 1317 gaagctctggataggatccgttctgatgcccttcattgccgtctt 1361
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 295 bits (149), Expect = 9e-77 Identities = 206/225 (91%) Strand = Plus / Minus Query: 407 gctgaggaagttcttgctcagcctcccgatccccgccaagtaccactacctgatgcagat 466 ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 30635330 gctgaggaagttcttgctcagcctcccaatccctgccaagtaccactacctgatgcagat 30635271 Query: 467 cggcggcaacctgcacgcgctgatcatcaagtacagccccgagggcgaggtgctcgacat 526 ||||||||| || ||||| |||||||||||||||| |||||| ||||||||||| ||||| Sbjct: 30635270 cggcggcaagctccacgctctgatcatcaagtacaaccccgaaggcgaggtgcttgacat 30635211 Query: 527 cttggaggacactaaagggcaggtggtgagagccgtaagcgaggtggaggagaaggatgg 586 ||||||||| || | |||||||||||| |||||||| || || || |||||||||||||| Sbjct: 30635210 cttggaggataccacagggcaggtggtaagagccgttagtgaagttgaggagaaggatgg 30635151 Query: 587 caagctttggataggatccgttctcatgcccttcattgccgtctt 631 ||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 30635150 gaagctctggataggatccgttctgatgcccttcattgccgtctt 30635106 Score = 188 bits (95), Expect = 2e-44 Identities = 131/143 (91%) Strand = Plus / Minus Query: 243 ttgagcagatactggctgaaaggtgagaaggcaggaaccgtcgatctcttcgccatcctg 302 |||||| |||||||||||||||| |||||||| |||||||| ||||| |||||||||||| Sbjct: 30635494 ttgagccgatactggctgaaaggggagaaggctggaaccgtggatcttttcgccatcctg 30635435 Query: 303 cctgggttcccggacaacgtgaggaccaacgacaagggcgaattctgggtagcaatccat 362 |||||||| || ||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 30635434 cctgggtttccagacaatgtgaggaccaacgacaagggtgaattctgggtagcaatccat 30635375 Query: 363 tgccggcgcagcgcatacgcccg 385 ||| |||||||| ||||||||| Sbjct: 30635374 tgcaggcgcagcatatacgcccg 30635352 Score = 107 bits (54), Expect = 4e-20 Identities = 66/70 (94%) Strand = Plus / Minus Query: 2 caccaacgacctcgacctcgacgccgacggcaacgtctacttcaccgacagcagcgtcct 61 ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||| Sbjct: 30636472 caccaacgacctcgacctcgacgacgacggcaacgtctacttcactgacagcagcatcca 30636413 Query: 62 ctaccagaga 71 |||||||||| Sbjct: 30636412 ctaccagaga 30636403 Score = 103 bits (52), Expect = 7e-19 Identities = 142/172 (82%) Strand = Plus / Minus Query: 72 aggcatttcatgcagttggttttctctggagatgcctctgggaggctcttgaaatacaat 131 |||||||||||||| |||||||||||||||||| |||| |||||||| |||||||| | Sbjct: 30635747 aggcatttcatgcaattggttttctctggagatccctcagggaggcttctgaaatacgac 30635688 Query: 132 ccacaaacaaaggaaacaacagtccttcaccgcaacctccaatttcccaatggagtgagc 191 || | |||||| || ||||||| || ||||||||| | || ||||| ||||| ||| | Sbjct: 30635687 ccgaacacaaagaaagcaacagttctccaccgcaacattcagtttccgaatggggtgtcc 30635628 Query: 192 ttaagcaaggacggttcattcttcgtcttctgtgaaggatctcgtggaaggt 243 | |||||||| || | |||||||||||||| |||||||| ||||| |||| Sbjct: 30635627 atgagcaaggatggcttgttcttcgtcttctgcgaaggatcccgtggcaggt 30635576 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Minus Query: 322 tgaggaccaacgacaagggcgaattctggg 351 ||||||||||||||||| | |||||||||| Sbjct: 30633413 tgaggaccaacgacaagagtgaattctggg 30633384 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 299 cctgcctgggttcccggacaacgtg 323 |||||| |||||||||||||||||| Sbjct: 8637170 cctgccggggttcccggacaacgtg 8637146
>gb|AC092556.8| Oryza sativa chromosome 3 BAC OSJNBa0047E24 genomic sequence, complete sequence Length = 157970 Score = 295 bits (149), Expect = 9e-77 Identities = 206/225 (91%) Strand = Plus / Plus Query: 407 gctgaggaagttcttgctcagcctcccgatccccgccaagtaccactacctgatgcagat 466 ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 127062 gctgaggaagttcttgctcagcctcccaatccctgccaagtaccactacctgatgcagat 127121 Query: 467 cggcggcaacctgcacgcgctgatcatcaagtacagccccgagggcgaggtgctcgacat 526 ||||||||| || ||||| |||||||||||||||| |||||| ||||||||||| ||||| Sbjct: 127122 cggcggcaagctccacgctctgatcatcaagtacaaccccgaaggcgaggtgcttgacat 127181 Query: 527 cttggaggacactaaagggcaggtggtgagagccgtaagcgaggtggaggagaaggatgg 586 ||||||||| || | |||||||||||| |||||||| || || || |||||||||||||| Sbjct: 127182 cttggaggataccacagggcaggtggtaagagccgttagtgaagttgaggagaaggatgg 127241 Query: 587 caagctttggataggatccgttctcatgcccttcattgccgtctt 631 ||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 127242 gaagctctggataggatccgttctgatgcccttcattgccgtctt 127286 Score = 188 bits (95), Expect = 2e-44 Identities = 131/143 (91%) Strand = Plus / Plus Query: 243 ttgagcagatactggctgaaaggtgagaaggcaggaaccgtcgatctcttcgccatcctg 302 |||||| |||||||||||||||| |||||||| |||||||| ||||| |||||||||||| Sbjct: 126898 ttgagccgatactggctgaaaggggagaaggctggaaccgtggatcttttcgccatcctg 126957 Query: 303 cctgggttcccggacaacgtgaggaccaacgacaagggcgaattctgggtagcaatccat 362 |||||||| || ||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 126958 cctgggtttccagacaatgtgaggaccaacgacaagggtgaattctgggtagcaatccat 127017 Query: 363 tgccggcgcagcgcatacgcccg 385 ||| |||||||| ||||||||| Sbjct: 127018 tgcaggcgcagcatatacgcccg 127040 Score = 107 bits (54), Expect = 4e-20 Identities = 66/70 (94%) Strand = Plus / Plus Query: 2 caccaacgacctcgacctcgacgccgacggcaacgtctacttcaccgacagcagcgtcct 61 ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||| Sbjct: 125920 caccaacgacctcgacctcgacgacgacggcaacgtctacttcactgacagcagcatcca 125979 Query: 62 ctaccagaga 71 |||||||||| Sbjct: 125980 ctaccagaga 125989 Score = 103 bits (52), Expect = 7e-19 Identities = 142/172 (82%) Strand = Plus / Plus Query: 72 aggcatttcatgcagttggttttctctggagatgcctctgggaggctcttgaaatacaat 131 |||||||||||||| |||||||||||||||||| |||| |||||||| |||||||| | Sbjct: 126645 aggcatttcatgcaattggttttctctggagatccctcagggaggcttctgaaatacgac 126704 Query: 132 ccacaaacaaaggaaacaacagtccttcaccgcaacctccaatttcccaatggagtgagc 191 || | |||||| || ||||||| || ||||||||| | || ||||| ||||| ||| | Sbjct: 126705 ccgaacacaaagaaagcaacagttctccaccgcaacattcagtttccgaatggggtgtcc 126764 Query: 192 ttaagcaaggacggttcattcttcgtcttctgtgaaggatctcgtggaaggt 243 | |||||||| || | |||||||||||||| |||||||| ||||| |||| Sbjct: 126765 atgagcaaggatggcttgttcttcgtcttctgcgaaggatcccgtggcaggt 126816 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Plus Query: 322 tgaggaccaacgacaagggcgaattctggg 351 ||||||||||||||||| | |||||||||| Sbjct: 128979 tgaggaccaacgacaagagtgaattctggg 129008
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 295 bits (149), Expect = 9e-77 Identities = 206/225 (91%) Strand = Plus / Minus Query: 407 gctgaggaagttcttgctcagcctcccgatccccgccaagtaccactacctgatgcagat 466 ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 30726752 gctgaggaagttcttgctcagcctcccaatccctgccaagtaccactacctgatgcagat 30726693 Query: 467 cggcggcaacctgcacgcgctgatcatcaagtacagccccgagggcgaggtgctcgacat 526 ||||||||| || ||||| |||||||||||||||| |||||| ||||||||||| ||||| Sbjct: 30726692 cggcggcaagctccacgctctgatcatcaagtacaaccccgaaggcgaggtgcttgacat 30726633 Query: 527 cttggaggacactaaagggcaggtggtgagagccgtaagcgaggtggaggagaaggatgg 586 ||||||||| || | |||||||||||| |||||||| || || || |||||||||||||| Sbjct: 30726632 cttggaggataccacagggcaggtggtaagagccgttagtgaagttgaggagaaggatgg 30726573 Query: 587 caagctttggataggatccgttctcatgcccttcattgccgtctt 631 ||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 30726572 gaagctctggataggatccgttctgatgcccttcattgccgtctt 30726528 Score = 188 bits (95), Expect = 2e-44 Identities = 131/143 (91%) Strand = Plus / Minus Query: 243 ttgagcagatactggctgaaaggtgagaaggcaggaaccgtcgatctcttcgccatcctg 302 |||||| |||||||||||||||| |||||||| |||||||| ||||| |||||||||||| Sbjct: 30726916 ttgagccgatactggctgaaaggggagaaggctggaaccgtggatcttttcgccatcctg 30726857 Query: 303 cctgggttcccggacaacgtgaggaccaacgacaagggcgaattctgggtagcaatccat 362 |||||||| || ||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 30726856 cctgggtttccagacaatgtgaggaccaacgacaagggtgaattctgggtagcaatccat 30726797 Query: 363 tgccggcgcagcgcatacgcccg 385 ||| |||||||| ||||||||| Sbjct: 30726796 tgcaggcgcagcatatacgcccg 30726774 Score = 107 bits (54), Expect = 4e-20 Identities = 66/70 (94%) Strand = Plus / Minus Query: 2 caccaacgacctcgacctcgacgccgacggcaacgtctacttcaccgacagcagcgtcct 61 ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||| Sbjct: 30727894 caccaacgacctcgacctcgacgacgacggcaacgtctacttcactgacagcagcatcca 30727835 Query: 62 ctaccagaga 71 |||||||||| Sbjct: 30727834 ctaccagaga 30727825 Score = 103 bits (52), Expect = 7e-19 Identities = 142/172 (82%) Strand = Plus / Minus Query: 72 aggcatttcatgcagttggttttctctggagatgcctctgggaggctcttgaaatacaat 131 |||||||||||||| |||||||||||||||||| |||| |||||||| |||||||| | Sbjct: 30727169 aggcatttcatgcaattggttttctctggagatccctcagggaggcttctgaaatacgac 30727110 Query: 132 ccacaaacaaaggaaacaacagtccttcaccgcaacctccaatttcccaatggagtgagc 191 || | |||||| || ||||||| || ||||||||| | || ||||| ||||| ||| | Sbjct: 30727109 ccgaacacaaagaaagcaacagttctccaccgcaacattcagtttccgaatggggtgtcc 30727050 Query: 192 ttaagcaaggacggttcattcttcgtcttctgtgaaggatctcgtggaaggt 243 | |||||||| || | |||||||||||||| |||||||| ||||| |||| Sbjct: 30727049 atgagcaaggatggcttgttcttcgtcttctgcgaaggatcccgtggcaggt 30726998 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Minus Query: 322 tgaggaccaacgacaagggcgaattctggg 351 ||||||||||||||||| | |||||||||| Sbjct: 30724835 tgaggaccaacgacaagagtgaattctggg 30724806 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 299 cctgcctgggttcccggacaacgtg 323 |||||| |||||||||||||||||| Sbjct: 8635005 cctgccggggttcccggacaacgtg 8634981
>gb|AY103886.1| Zea mays PCO129988 mRNA sequence Length = 2158 Score = 87.7 bits (44), Expect = 4e-14 Identities = 86/100 (86%) Strand = Plus / Plus Query: 406 agctgaggaagttcttgctcagcctcccgatccccgccaagtaccactacctgatgcaga 465 ||||||||||||| ||||||||| |||| ||||| ||||||||||||||||||||||| | Sbjct: 1764 agctgaggaagtttttgctcagcttcccaatccctgccaagtaccactacctgatgcata 1823 Query: 466 tcggcggcaacctgcacgcgctgatcatcaagtacagccc 505 ||| |||| || ||||| ||||||||| | ||||||| Sbjct: 1824 tcgatagcaagctctacgcgttgatcatcagggacagccc 1863
>gb|BT013821.1| Lycopersicon esculentum clone 132743F, mRNA sequence Length = 1514 Score = 50.1 bits (25), Expect = 0.009 Identities = 58/69 (84%) Strand = Plus / Plus Query: 555 agagccgtaagcgaggtggaggagaaggatggcaagctttggataggatccgttctcatg 614 ||||| || |||||||| ||||||| |||||| ||||||||||| ||| ||||||||| Sbjct: 1228 agagctgtcagcgaggtagaggagagggatgggaagctttggatgggaagtgttctcatg 1287 Query: 615 cccttcatt 623 | |||||| Sbjct: 1288 tctttcatt 1296 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 tactggctgaaaggtgagaa 271 |||||||||||||||||||| Sbjct: 925 tactggctgaaaggtgagaa 944
>gb|AC171736.1| Lycopersicon esculentum chromosome 11 clone C11HBa0323E19, complete sequence Length = 141216 Score = 50.1 bits (25), Expect = 0.009 Identities = 58/69 (84%) Strand = Plus / Minus Query: 555 agagccgtaagcgaggtggaggagaaggatggcaagctttggataggatccgttctcatg 614 ||||| || |||||||| ||||||| |||||| ||||||||||| ||| ||||||||| Sbjct: 82951 agagctgtcagcgaggtagaggagagggatgggaagctttggatgggaagtgttctcatg 82892 Query: 615 cccttcatt 623 | |||||| Sbjct: 82891 tctttcatt 82883 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 tactggctgaaaggtgagaa 271 |||||||||||||||||||| Sbjct: 83254 tactggctgaaaggtgagaa 83235
>ref|NM_100720.2| Arabidopsis thaliana strictosidine synthase AT1G08470 mRNA, complete cds Length = 1431 Score = 48.1 bits (24), Expect = 0.036 Identities = 33/36 (91%) Strand = Plus / Plus Query: 110 tgggaggctcttgaaatacaatccacaaacaaagga 145 ||||||| | ||||||||||||||| |||||||||| Sbjct: 762 tgggagggtgttgaaatacaatccaaaaacaaagga 797 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 570 gtggaggagaaggatggcaagctttggat 598 ||||||||||| ||||| ||||||||||| Sbjct: 1222 gtggaggagaaagatgggaagctttggat 1250
>gb|BT013161.1| Lycopersicon esculentum clone 134193F, mRNA sequence Length = 1797 Score = 48.1 bits (24), Expect = 0.036 Identities = 33/36 (91%) Strand = Plus / Plus Query: 193 taagcaaggacggttcattcttcgtcttctgtgaag 228 |||||||||||||||| ||||| || |||||||||| Sbjct: 1239 taagcaaggacggttccttctttgtattctgtgaag 1274
>gb|AY117314.1| Arabidopsis thaliana unknown protein (At1g08470) mRNA, complete cds Length = 1204 Score = 48.1 bits (24), Expect = 0.036 Identities = 33/36 (91%) Strand = Plus / Plus Query: 110 tgggaggctcttgaaatacaatccacaaacaaagga 145 ||||||| | ||||||||||||||| |||||||||| Sbjct: 639 tgggagggtgttgaaatacaatccaaaaacaaagga 674 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 570 gtggaggagaaggatggcaagctttggat 598 ||||||||||| ||||| ||||||||||| Sbjct: 1099 gtggaggagaaagatgggaagctttggat 1127
>gb|AY064047.1| Arabidopsis thaliana unknown protein (At1g08470) mRNA, complete cds Length = 1365 Score = 48.1 bits (24), Expect = 0.036 Identities = 33/36 (91%) Strand = Plus / Plus Query: 110 tgggaggctcttgaaatacaatccacaaacaaagga 145 ||||||| | ||||||||||||||| |||||||||| Sbjct: 680 tgggagggtgttgaaatacaatccaaaaacaaagga 715 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 570 gtggaggagaaggatggcaagctttggat 598 ||||||||||| ||||| ||||||||||| Sbjct: 1140 gtggaggagaaagatgggaagctttggat 1168
>gb|AF419594.1|AF419594 Arabidopsis thaliana At1g08470/T27G7_9 mRNA, complete cds Length = 1419 Score = 48.1 bits (24), Expect = 0.036 Identities = 33/36 (91%) Strand = Plus / Plus Query: 110 tgggaggctcttgaaatacaatccacaaacaaagga 145 ||||||| | ||||||||||||||| |||||||||| Sbjct: 750 tgggagggtgttgaaatacaatccaaaaacaaagga 785 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 570 gtggaggagaaggatggcaagctttggat 598 ||||||||||| ||||| ||||||||||| Sbjct: 1210 gtggaggagaaagatgggaagctttggat 1238
>gb|AC006932.8|AC006932 Genomic sequence for Arabidopsis thaliana BAC T27G7 from chromosome I, complete sequence Length = 89479 Score = 48.1 bits (24), Expect = 0.036 Identities = 33/36 (91%) Strand = Plus / Minus Query: 110 tgggaggctcttgaaatacaatccacaaacaaagga 145 ||||||| | ||||||||||||||| |||||||||| Sbjct: 63840 tgggagggtgttgaaatacaatccaaaaacaaagga 63805 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 570 gtggaggagaaggatggcaagctttggat 598 ||||||||||| ||||| ||||||||||| Sbjct: 63176 gtggaggagaaagatgggaagctttggat 63148
>ref|XM_482631.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1284 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 34 acgtctacttcaccgacagcagc 56 ||||||||||||||||||||||| Sbjct: 595 acgtctacttcaccgacagcagc 617
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 34 acgtctacttcaccgacagcagc 56 ||||||||||||||||||||||| Sbjct: 21543283 acgtctacttcaccgacagcagc 21543261
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 27 gacggcaacgtctacttcaccgacagc 53 ||||||||||||||| ||||||||||| Sbjct: 3005037 gacggcaacgtctacgtcaccgacagc 3005011
>dbj|AP004703.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0528B09 Length = 156897 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 34 acgtctacttcaccgacagcagc 56 ||||||||||||||||||||||| Sbjct: 147278 acgtctacttcaccgacagcagc 147256
>dbj|AP004764.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0708B04 Length = 170523 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 34 acgtctacttcaccgacagcagc 56 ||||||||||||||||||||||| Sbjct: 3457 acgtctacttcaccgacagcagc 3435
>dbj|AK073494.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044F17, full insert sequence Length = 1285 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 34 acgtctacttcaccgacagcagc 56 ||||||||||||||||||||||| Sbjct: 596 acgtctacttcaccgacagcagc 618
>dbj|AK066840.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088M11, full insert sequence Length = 865 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 34 acgtctacttcaccgacagcagc 56 ||||||||||||||||||||||| Sbjct: 211 acgtctacttcaccgacagcagc 233
>ref|XM_469767.1| Oryza sativa (japonica cultivar-group), mRNA Length = 780 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Minus Query: 322 tgaggaccaacgacaagggcgaattctggg 351 ||||||||||||||||| | |||||||||| Sbjct: 658 tgaggaccaacgacaagagtgaattctggg 629
>emb|CR376821.11| Zebrafish DNA sequence from clone CH211-67P11 in linkage group 25, complete sequence Length = 187216 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 129 aatccacaaacaaaggaaacaa 150 |||||||||||||||||||||| Sbjct: 364 aatccacaaacaaaggaaacaa 385
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 3 accaacgacctcgacctcgacg 24 |||||||||||||||||||||| Sbjct: 1159490 accaacgacctcgacctcgacg 1159511
>gb|AC113055.9| Mus musculus chromosome 5, clone RP23-251M20, complete sequence Length = 185733 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 69 agaaggcatttcatgcagttggttttctc 97 ||||| ||||||||| ||||||||||||| Sbjct: 79815 agaagacatttcatggagttggttttctc 79843
>ref|NM_187527.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1284 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 299 cctgcctgggttcccggacaacgtg 323 |||||| |||||||||||||||||| Sbjct: 897 cctgccggggttcccggacaacgtg 921
>gb|AC160545.8| Mus musculus chromosome 1, clone RP23-217K18, complete sequence Length = 240081 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 gctgaaaggtgagaaggcagg 277 ||||||||||||||||||||| Sbjct: 66108 gctgaaaggtgagaaggcagg 66088
>ref|XM_478624.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1056 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 gtctacttcaccgacagcagc 56 ||||||||||||||||||||| Sbjct: 532 gtctacttcaccgacagcagc 552
>ref|XM_478622.1| Oryza sativa (japonica cultivar-group), mRNA Length = 747 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 gtctacttcaccgacagcagc 56 ||||||||||||||||||||| Sbjct: 226 gtctacttcaccgacagcagc 246
>ref|XM_478617.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1053 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 gtctacttcaccgacagcagc 56 ||||||||||||||||||||| Sbjct: 532 gtctacttcaccgacagcagc 552
>gb|AC135561.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0086N07 map S790A, complete sequence Length = 178523 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 210 ttcttcgtcttctgtgaaggatctc 234 |||||| |||||||||||||||||| Sbjct: 17450 ttcttcttcttctgtgaaggatctc 17426
>emb|AL390036.17| Human DNA sequence from clone RP11-356N1 on chromosome 1 Contains the 3' end of a novel gene, a novel gene, the 3' end of the SLC25A24 gene for solute carrier family 25 (mitochondrial carrier; phosphate carrier) member 24 and two CpG islands, complete sequence Length = 183037 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 571 tggaggagaaggatggcaagc 591 ||||||||||||||||||||| Sbjct: 94715 tggaggagaaggatggcaagc 94695
>gb|AC091659.3| Papio anubis clone RP41-387F12, complete sequence Length = 62427 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 54 agcgtcctctaccagagaaggcatt 78 |||||||||| |||||||||||||| Sbjct: 18831 agcgtcctctgccagagaaggcatt 18855
>ref|XM_779479.1| PREDICTED: Strongylocentrotus purpuratus similar to chromodomain helicase DNA binding protein 5 (LOC579359), partial mRNA Length = 6573 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 567 gaggtggaggagaaggatggc 587 ||||||||||||||||||||| Sbjct: 5214 gaggtggaggagaaggatggc 5234
>emb|AL939119.1|SCO939119 Streptomyces coelicolor A3(2) complete genome; segment 16/29 Length = 299050 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 gccgacggcaacgtctacttc 44 ||||||||||||||||||||| Sbjct: 109283 gccgacggcaacgtctacttc 109303
>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29 Length = 314100 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 cgacctcgacctcgacgccga 28 ||||||||||||||||||||| Sbjct: 23013 cgacctcgacctcgacgccga 22993
>gb|AC124957.18| Medicago truncatula clone mth2-15k14, complete sequence Length = 140624 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 570 gtggaggagaaggatggcaagctttggatagga 602 ||||||||||||||||| || || ||||||||| Sbjct: 8352 gtggaggagaaggatggtaaactctggatagga 8320
>gb|AC150799.4| Medicago truncatula chromosome 2 BAC clone mth2-47j13, complete sequence Length = 119159 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 570 gtggaggagaaggatggcaagctttggatagga 602 ||||||||||||||||| || || ||||||||| Sbjct: 117723 gtggaggagaaggatggtaaactctggatagga 117691
>gb|AC135206.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1041F02, complete sequence Length = 137327 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 299 cctgcctgggttcccggacaacgtg 323 |||||| |||||||||||||||||| Sbjct: 118142 cctgccggggttcccggacaacgtg 118118
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 210 ttcttcgtcttctgtgaaggatctc 234 |||||| |||||||||||||||||| Sbjct: 13166630 ttcttcttcttctgtgaaggatctc 13166654 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 aaaggtgagaaggcaggaac 280 |||||||||||||||||||| Sbjct: 22222174 aaaggtgagaaggcaggaac 22222155
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 gtctacttcaccgacagcagc 56 ||||||||||||||||||||| Sbjct: 21511008 gtctacttcaccgacagcagc 21511028 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 gtctacttcaccgacagcagc 56 ||||||||||||||||||||| Sbjct: 21505429 gtctacttcaccgacagcagc 21505449 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 36 gtctacttcaccgacagcagc 56 ||||||||||||||||||||| Sbjct: 21465843 gtctacttcaccgacagcagc 21465823 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 10 acctcgacctcgacgccgacggca 33 ||||||||||||||| |||||||| Sbjct: 23045940 acctcgacctcgacgtcgacggca 23045963
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 ctcgacgccgacggcaacgtc 38 ||||||||||||||||||||| Sbjct: 4218377 ctcgacgccgacggcaacgtc 4218357
>dbj|AP005156.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1729_E01 Length = 155527 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 gtctacttcaccgacagcagc 56 ||||||||||||||||||||| Sbjct: 155064 gtctacttcaccgacagcagc 155084 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 gtctacttcaccgacagcagc 56 ||||||||||||||||||||| Sbjct: 149485 gtctacttcaccgacagcagc 149505 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 36 gtctacttcaccgacagcagc 56 ||||||||||||||||||||| Sbjct: 109899 gtctacttcaccgacagcagc 109879
>dbj|AP003838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1582_D10 Length = 103475 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 gtctacttcaccgacagcagc 56 ||||||||||||||||||||| Sbjct: 48792 gtctacttcaccgacagcagc 48812 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 gtctacttcaccgacagcagc 56 ||||||||||||||||||||| Sbjct: 43213 gtctacttcaccgacagcagc 43233 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 36 gtctacttcaccgacagcagc 56 ||||||||||||||||||||| Sbjct: 3627 gtctacttcaccgacagcagc 3607
>dbj|AK100452.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091D01, full insert sequence Length = 1604 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 299 cctgcctgggttcccggacaacgtg 323 |||||| |||||||||||||||||| Sbjct: 975 cctgccggggttcccggacaacgtg 999
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 8 cgacctcgacctcgacgccgacggcaacgtctacttc 44 |||||| ||| ||||||||||||||||| ||| |||| Sbjct: 3949755 cgacctggacgtcgacgccgacggcaacttctccttc 3949719 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 tcgacgccgacggcaacgtc 38 |||||||||||||||||||| Sbjct: 2279895 tcgacgccgacggcaacgtc 2279876
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 210 ttcttcgtcttctgtgaaggatctc 234 |||||| |||||||||||||||||| Sbjct: 13246809 ttcttcttcttctgtgaaggatctc 13246833 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 aaaggtgagaaggcaggaac 280 |||||||||||||||||||| Sbjct: 22532085 aaaggtgagaaggcaggaac 22532066
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 ggcaacctgcacgcgctgat 490 |||||||||||||||||||| Sbjct: 702000 ggcaacctgcacgcgctgat 701981
>gb|AE010431.1| Methanopyrus kandleri AV19 section 130 of 157 of the complete genome Length = 10503 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 acgacctcgacctcgacgcc 26 |||||||||||||||||||| Sbjct: 653 acgacctcgacctcgacgcc 634
>ref|XM_450726.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1206 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 29 cggcaacgtctacttcaccgacagcagc 56 |||| |||||||||||||||| |||||| Sbjct: 555 cggcgacgtctacttcaccgatagcagc 582
>ref|XM_450724.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1401 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 29 cggcaacgtctacttcaccgacagcagc 56 |||| |||||||||||||||| |||||| Sbjct: 597 cggcgacgtctacttcaccgatagcagc 624
>ref|XM_478783.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2097 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 10 acctcgacctcgacgccgacggca 33 ||||||||||||||| |||||||| Sbjct: 1445 acctcgacctcgacgtcgacggca 1468
>gb|AC153638.4| Mus musculus 6 BAC RP23-416H6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 171957 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 403 tgcagctgaggaagttcttg 422 |||||||||||||||||||| Sbjct: 57878 tgcagctgaggaagttcttg 57897
>gb|AE001274.2| Leishmania major strain Friedlin chromosome 1, complete sequence Length = 268984 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 497 gtacagccccgagggcgagg 516 |||||||||||||||||||| Sbjct: 46225 gtacagccccgagggcgagg 46206
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 505 ccgagggcgaggtgctcgac 524 |||||||||||||||||||| Sbjct: 2566647 ccgagggcgaggtgctcgac 2566628
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 accaacgacctcgacctcga 22 |||||||||||||||||||| Sbjct: 1590558 accaacgacctcgacctcga 1590577
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 acgacctcgacctcgacgcc 26 |||||||||||||||||||| Sbjct: 2957542 acgacctcgacctcgacgcc 2957523
>gb|AC147322.2| Pan troglodytes BAC clone RP43-41H22 from 7, complete sequence Length = 174281 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 405 cagctgaggaagttcttgct 424 |||||||||||||||||||| Sbjct: 11942 cagctgaggaagttcttgct 11923
>gb|AC134552.4| Mus musculus BAC clone RP24-279K10 from chromosome 8, complete sequence Length = 154774 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 129 aatccacaaacaaaggaaacaacagtcc 156 |||||| |||||||||||| |||||||| Sbjct: 27960 aatccataaacaaaggaaataacagtcc 27987
>gb|AC103355.9| Mus musculus chromosome 14, clone RP24-482C10, complete sequence Length = 192348 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 tgaaaggtgagaaggcagga 278 |||||||||||||||||||| Sbjct: 61657 tgaaaggtgagaaggcagga 61676
>emb|BX950198.13| Zebrafish DNA sequence from clone CH211-214G3 in linkage group 24, complete sequence Length = 196308 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 cttgaaatacaatccacaaa 138 |||||||||||||||||||| Sbjct: 194674 cttgaaatacaatccacaaa 194655
>gb|AC132451.3| Mus musculus BAC clone RP23-194C20 from chromosome 8, complete sequence Length = 188539 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 129 aatccacaaacaaaggaaacaacagtcc 156 |||||| |||||||||||| |||||||| Sbjct: 186663 aatccataaacaaaggaaataacagtcc 186690
>gb|AC124713.5| Mus musculus BAC clone RP24-116N2 from chromosome 8, complete sequence Length = 184855 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 cacaaacaaaggaaacaaca 152 |||||||||||||||||||| Sbjct: 47890 cacaaacaaaggaaacaaca 47871
>emb|AJ866780.1| Bos taurus partial mRNA for alpha-2,6-sialyltransferase ST6Gal II (st6Gal II gene) Length = 1488 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 tctacttcaccgacagcagc 56 |||||||||||||||||||| Sbjct: 83 tctacttcaccgacagcagc 102
>emb|AJ301559.2|RFA301559 Rhodococcus fascians ORF1 (partial), ORF2, ORF3, vicA gene and ORF5 (partial) Length = 18560 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 cctcgacgccgacggcaacg 36 |||||||||||||||||||| Sbjct: 13955 cctcgacgccgacggcaacg 13936
>gb|AC109365.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0034P08, complete sequence Length = 173088 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 aaaggtgagaaggcaggaac 280 |||||||||||||||||||| Sbjct: 119124 aaaggtgagaaggcaggaac 119143
>gb|AC004549.1| Homo sapiens BAC clone CTA-459N13 from 7, complete sequence Length = 123891 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 405 cagctgaggaagttcttgct 424 |||||||||||||||||||| Sbjct: 71795 cagctgaggaagttcttgct 71776
>emb|CR678575.2|CNS0FMJF Tetraodon nigroviridis full-length cDNA Length = 827 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 494 caagtacagccccgagggcgaggt 517 |||||||| ||||||||||||||| Sbjct: 122 caagtacacccccgagggcgaggt 145
>gb|AC141436.17| Medicago truncatula clone mth2-31k19, complete sequence Length = 112268 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 aaatacaatccacaaacaaa 142 |||||||||||||||||||| Sbjct: 54344 aaatacaatccacaaacaaa 54325
>emb|CR361548.8| Zebrafish DNA sequence from clone CH211-140M22 in linkage group 1, complete sequence Length = 146409 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 122 gaaatacaatccacaaacaaaggaaaca 149 ||||| || ||||||||||||||||||| Sbjct: 138730 gaaattcactccacaaacaaaggaaaca 138757
>gb|AC139706.8| Medicago truncatula clone mth2-28n21, complete sequence Length = 106244 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 aaatacaatccacaaacaaa 142 |||||||||||||||||||| Sbjct: 51908 aaatacaatccacaaacaaa 51927
>emb|CR846094.7| Zebrafish DNA sequence from clone CH211-264F16 in linkage group 24, complete sequence Length = 175626 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 cttgaaatacaatccacaaa 138 |||||||||||||||||||| Sbjct: 169769 cttgaaatacaatccacaaa 169788
>emb|AL731556.11| Human DNA sequence from clone RP11-428P16 on chromosome 10 Contains the 5' end of the KCNMA1 gene for potassium large conductance calcium-activated channel subfamily M alpha member 1, a novel zinc finger pseudogene (KIAA1629) and two CpG islands, complete sequence Length = 203003 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 567 gaggtggaggagaaggatgg 586 |||||||||||||||||||| Sbjct: 77232 gaggtggaggagaaggatgg 77251
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 accaacgacctcgacctcga 22 |||||||||||||||||||| Sbjct: 2813406 accaacgacctcgacctcga 2813425
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 484 cgctgatcatcaagtacagc 503 |||||||||||||||||||| Sbjct: 4020995 cgctgatcatcaagtacagc 4021014
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 18 ctcgacgccgacggcaacgtctac 41 |||| ||||||||||||||||||| Sbjct: 1894174 ctcggcgccgacggcaacgtctac 1894151
>ref|XM_967507.1| PREDICTED: Tribolium castaneum similar to CG6954-PA (LOC661343), mRNA Length = 5226 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 419 cttgctcagcctcccgatcc 438 |||||||||||||||||||| Sbjct: 3399 cttgctcagcctcccgatcc 3418
>emb|Z99124.2|BSUB0021 Bacillus subtilis complete genome (section 21 of 21): from 4010730 to 4214630 Length = 203901 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 333 gacaagggcgaattctgggt 352 |||||||||||||||||||| Sbjct: 56051 gacaagggcgaattctgggt 56070
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 470 cggcaacctgcacgcgctgatcat 493 ||||||||||||| |||||||||| Sbjct: 3566033 cggcaacctgcacccgctgatcat 3566010 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 aaccgtcgatctcttcgcca 297 |||||||||||||||||||| Sbjct: 1649952 aaccgtcgatctcttcgcca 1649933
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 12 ctcgacctcgacgccgacggcaac 35 ||||||||||||| |||||||||| Sbjct: 2965091 ctcgacctcgacggcgacggcaac 2965114
>emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genome; segment 7/16 Length = 349142 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 18 ctcgacgccgacggcaacgtctacttca 45 ||||||||||| |||||| ||||||||| Sbjct: 318733 ctcgacgccgaaggcaacttctacttca 318760
>gb|AC164311.4| Mus musculus BAC clone RP23-144H18 from chromosome 8, complete sequence Length = 190693 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 cacaaacaaaggaaacaaca 152 |||||||||||||||||||| Sbjct: 138430 cacaaacaaaggaaacaaca 138411
>emb|CR931808.2| Medicago truncatula chromosome 5 clone mth2-144o15, COMPLETE SEQUENCE Length = 124859 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 aaatacaatccacaaacaaa 142 |||||||||||||||||||| Sbjct: 96491 aaatacaatccacaaacaaa 96472
>gb|AE017342.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 2, complete sequence Length = 1632307 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 tcaccgcaacctccaatttc 177 |||||||||||||||||||| Sbjct: 453069 tcaccgcaacctccaatttc 453050
>gb|AE005866.1| Caulobacter crescentus CB15 section 192 of 359 of the complete genome Length = 11992 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 tcgacctcgacgccgacggc 32 |||||||||||||||||||| Sbjct: 11258 tcgacctcgacgccgacggc 11239
>dbj|AK098326.1| Homo sapiens cDNA FLJ41007 fis, clone UTERU2017810 Length = 2574 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 567 gaggtggaggagaaggatgg 586 |||||||||||||||||||| Sbjct: 1138 gaggtggaggagaaggatgg 1119
>gb|AE012459.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 367 of 460 of the complete genome Length = 12023 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 tacttcaccgacagcagcgt 58 |||||||||||||||||||| Sbjct: 9613 tacttcaccgacagcagcgt 9594
>gb|AY244759.1| Solanum tuberosum clone PTGMAGT321-SH AFLP marker sequence Length = 321 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 tactggctgaaaggtgagaa 271 |||||||||||||||||||| Sbjct: 86 tactggctgaaaggtgagaa 105
>gb|AC110990.3| Homo sapiens 3 BAC RP11-17A18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 55000 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 aaggcatttcatgcagttgg 90 |||||||||||||||||||| Sbjct: 32086 aaggcatttcatgcagttgg 32067
>gb|AC009811.14| Homo sapiens chromosome 3, clone RP11-491K7, complete sequence Length = 171083 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 aaggcatttcatgcagttgg 90 |||||||||||||||||||| Sbjct: 6688 aaggcatttcatgcagttgg 6707
>ref|NM_001008668.1| Bos taurus alpha 2,6 sialyltransferase (SIAT2), mRNA Length = 1541 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 tctacttcaccgacagcagc 56 |||||||||||||||||||| Sbjct: 126 tctacttcaccgacagcagc 145
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 cctcgacctcgacgccgacg 30 |||||||||||||||||||| Sbjct: 4629318 cctcgacctcgacgccgacg 4629299 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 acgacctcgacctcgacgccgacg 30 |||| ||||||||||||||||||| Sbjct: 711394 acgatctcgacctcgacgccgacg 711417
>gb|AC147316.4| Pan troglodytes BAC clone RP43-49H2 from chromosome 7, complete sequence Length = 209609 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 405 cagctgaggaagttcttgct 424 |||||||||||||||||||| Sbjct: 91718 cagctgaggaagttcttgct 91699
>gb|AC092495.2| Mus musculus strain C57BL6/J chromosome 6 clone RP23-73G15, complete sequence Length = 65584 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 403 tgcagctgaggaagttcttg 422 |||||||||||||||||||| Sbjct: 306 tgcagctgaggaagttcttg 325
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 tacttcaccgacagcagcgt 58 |||||||||||||||||||| Sbjct: 906157 tacttcaccgacagcagcgt 906176
>gb|DQ353938.1| Bos taurus alpha 2,6 sialyltransferase (ST6GalII) mRNA, complete cds Length = 1541 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 tctacttcaccgacagcagc 56 |||||||||||||||||||| Sbjct: 126 tctacttcaccgacagcagc 145
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 503 ccccgagggcgaggtgctcg 522 |||||||||||||||||||| Sbjct: 735489 ccccgagggcgaggtgctcg 735470
>gb|AC024950.3|AC024950 Mus musculus strain C57BL6/J chromosome 6 clone RP23-208N9, complete sequence Length = 182382 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 403 tgcagctgaggaagttcttg 422 |||||||||||||||||||| Sbjct: 173110 tgcagctgaggaagttcttg 173129
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 29 cggcaacgtctacttcaccgacagcagc 56 |||| |||||||||||||||| |||||| Sbjct: 12483484 cggcgacgtctacttcaccgatagcagc 12483511 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 29 cggcaacgtctacttcaccgacagcagc 56 |||| |||||||||||||||| |||||| Sbjct: 12413688 cggcgacgtctacttcaccgatagcagc 12413715 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 29 cggcaacgtctacttcaccgacagcagc 56 |||| |||||||||||||||| |||||| Sbjct: 12401655 cggcgacgtctacttcaccgatagcagc 12401682
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 29 cggcaacgtctacttcaccgacagcagc 56 |||| |||||||||||||||| |||||| Sbjct: 20635249 cggcgacgtctacttcaccgatagcagc 20635222
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 cctcgacctcgacgccgacg 30 |||||||||||||||||||| Sbjct: 3955330 cctcgacctcgacgccgacg 3955311
>gb|AC103895.3| Papio anubis clone RP41-397E13, complete sequence Length = 166686 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 405 cagctgaggaagttcttgct 424 |||||||||||||||||||| Sbjct: 89991 cagctgaggaagttcttgct 89972
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 caccaacgacctcgacctcg 21 |||||||||||||||||||| Sbjct: 2322411 caccaacgacctcgacctcg 2322392
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 17 cctcgacgccgacggcaacgtcta 40 ||||| |||||||||||||||||| Sbjct: 6405859 cctcggcgccgacggcaacgtcta 6405882
>dbj|AP003682.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0427B07 Length = 172058 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 29 cggcaacgtctacttcaccgacagcagc 56 |||| |||||||||||||||| |||||| Sbjct: 57656 cggcgacgtctacttcaccgatagcagc 57629
>emb|BX294175.5| Zebrafish DNA sequence from clone DKEY-281I8 in linkage group 1, complete sequence Length = 165355 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 122 gaaatacaatccacaaacaaaggaaaca 149 ||||| || ||||||||||||||||||| Sbjct: 84479 gaaattcactccacaaacaaaggaaaca 84452
>dbj|AP005908.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1121_A05 Length = 172668 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 10 acctcgacctcgacgccgacggca 33 ||||||||||||||| |||||||| Sbjct: 121154 acctcgacctcgacgtcgacggca 121177
>dbj|AP005867.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0599F09 Length = 157415 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 29 cggcaacgtctacttcaccgacagcagc 56 |||| |||||||||||||||| |||||| Sbjct: 149068 cggcgacgtctacttcaccgatagcagc 149095 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 29 cggcaacgtctacttcaccgacagcagc 56 |||| |||||||||||||||| |||||| Sbjct: 79272 cggcgacgtctacttcaccgatagcagc 79299 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 29 cggcaacgtctacttcaccgacagcagc 56 |||| |||||||||||||||| |||||| Sbjct: 67239 cggcgacgtctacttcaccgatagcagc 67266
>dbj|AK109686.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-D10, full insert sequence Length = 1401 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 29 cggcaacgtctacttcaccgacagcagc 56 |||| |||||||||||||||| |||||| Sbjct: 597 cggcgacgtctacttcaccgatagcagc 624
>dbj|AK099435.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013014O02, full insert sequence Length = 1715 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 10 acctcgacctcgacgccgacggca 33 ||||||||||||||| |||||||| Sbjct: 785 acctcgacctcgacgtcgacggca 808
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 2 caccaacgacctcgacctcgacgc 25 ||||||| |||||||||||||||| Sbjct: 246349 caccaaccacctcgacctcgacgc 246372
>emb|AL833804.16| Mouse DNA sequence from clone RP23-20A6 on chromosome 2, complete sequence Length = 200521 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 tctggagatgcctctgggag 115 |||||||||||||||||||| Sbjct: 121961 tctggagatgcctctgggag 121980
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caacgacctcgacctcgacg 24 |||||||||||||||||||| Sbjct: 1532658 caacgacctcgacctcgacg 1532639 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 acgacctcgacctcgacgcc 26 |||||||||||||||||||| Sbjct: 851545 acgacctcgacctcgacgcc 851564
>gb|AC166113.3| Mus musculus BAC clone RP23-23E6 from chromosome 14, complete sequence Length = 252394 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 tgaaaggtgagaaggcagga 278 |||||||||||||||||||| Sbjct: 208520 tgaaaggtgagaaggcagga 208539
>gb|U58322.1|XGU58322 Xiphias gladius sarcoplasmic reticulum Ca2+-ATPase fast isoform (SERCA1) mRNA, partial cds Length = 270 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 494 caagtacagccccgagggcgaggt 517 |||||||| ||||||||||||||| Sbjct: 117 caagtacacccccgagggcgaggt 140
>gb|L46867.1|ACATPBF Acanthamoeba castellanii TPBF mRNA, complete cds Length = 1062 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 cgtctacttcaccgacagca 54 |||||||||||||||||||| Sbjct: 468 cgtctacttcaccgacagca 487
>emb|AJ001217.1|HSCGG10P5 Homo sapiens DNA for (CGG)n trinucleotide repeat region, isolate P5-5 (Chr.10) Length = 5365 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 567 gaggtggaggagaaggatgg 586 |||||||||||||||||||| Sbjct: 1469 gaggtggaggagaaggatgg 1488
>dbj|D45912.1| Bacillus subtilis genome sequence between the iol and hut operon, partial and complete cds Length = 23351 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 333 gacaagggcgaattctgggt 352 |||||||||||||||||||| Sbjct: 4202 gacaagggcgaattctgggt 4183 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,899,217 Number of Sequences: 3902068 Number of extensions: 5899217 Number of successful extensions: 121576 Number of sequences better than 10.0: 122 Number of HSP's better than 10.0 without gapping: 126 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 118695 Number of HSP's gapped (non-prelim): 2879 length of query: 637 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 614 effective length of database: 17,143,297,704 effective search space: 10525984790256 effective search space used: 10525984790256 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
