ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bags4l23 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB098063.1| Oryza sativa (japonica cultivar-group) OsSPDS2 mRNA for aminopropyl transferase, complete cds Length = 1560 Score = 470 bits (237), Expect = e-129 Identities = 445/513 (86%), Gaps = 1/513 (0%) Strand = Plus / Plus Query: 1 ccaatgtggcactggggaggctcattcgttgaaagtagagaagattttgtaccagggaaa 60 |||||||||| |||| || |||||||| ||||||||||||| ||| |||| || || || Sbjct: 337 ccaatgtggc-ctggagaagctcattctctgaaagtagagaatattctgtatcaagggaa 395 Query: 61 atcgccataccaagaagttttagtattcgagtcttcaacctatgggaatgtccttgtgct 120 ||| |||||||||||| | ||||| || ||||| ||||||||||||||||| || ||||| Sbjct: 396 atcaccataccaagaaatcttagtttttgagtcctcaacctatgggaatgttctggtgct 455 Query: 121 tgatggaattgttcagctgactgacaaggatgaatgtgcataccaggaaatggttactca 180 |||||| ||||| |||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 456 tgatggtattgtgcagctgaccgaaaaggatgaatgtgcataccaggaaatggttactca 515 Query: 181 ccttgcactgtgctcaattccatctcctaaaaatgttttggttgtcggaggtggtgatgg 240 |||| |||||||||| |||||||| || |||| ||||||||||||||||||||||||||| Sbjct: 516 ccttccactgtgctcgattccatcccccaaaagtgttttggttgtcggaggtggtgatgg 575 Query: 241 tggtgtactaagagaaatagccaagcatgattcagtggagagtatagacatatgtgagat 300 |||||| ||| |||||||||||| |||| |||||||||| || || |||||||| || Sbjct: 576 tggtgtgctacgagaaatagccagacatgcctcagtggagaacatcgatatatgtgaaat 635 Query: 301 tgatcagctagttattgatgtttgtaaagattttttcccacgtctatatgttggatataa 360 || ||||||||||||||||| ||||||||||| ||||||| |||| |||||||| || Sbjct: 636 agaccagctagttattgatgtctgtaaagatttcttcccacaactatctgttggattcaa 695 Query: 361 agaccctcgtgtcagacttcatgttggcgatgctgtagagttcttgagaaattctccaga 420 ||| || ||||| |||||||||||| || ||||| || |||||||||||| | || || Sbjct: 696 agatccccgtgttcaacttcatgttggtgacgctgtggatttcttgagaaatgcccctga 755 Query: 421 aggaaaatacgatgccattattgttgattcatcagatccaattgggccagcccaggaact 480 ||| ||||| ||||| || |||||||||||||| || |||||||||||||| ||||| || Sbjct: 756 agggaaatatgatgctatcattgttgattcatctgacccaattgggccagctcaggagct 815 Query: 481 tgtggagaagcccttttttcaggcaattgctag 513 |||||||||||||||||||||| |||||||||| Sbjct: 816 tgtggagaagcccttttttcagacaattgctag 848
>dbj|AK068518.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155G09, full insert sequence Length = 1614 Score = 470 bits (237), Expect = e-129 Identities = 445/513 (86%), Gaps = 1/513 (0%) Strand = Plus / Plus Query: 1 ccaatgtggcactggggaggctcattcgttgaaagtagagaagattttgtaccagggaaa 60 |||||||||| |||| || |||||||| ||||||||||||| ||| |||| || || || Sbjct: 359 ccaatgtggc-ctggagaagctcattctctgaaagtagagaatattctgtatcaagggaa 417 Query: 61 atcgccataccaagaagttttagtattcgagtcttcaacctatgggaatgtccttgtgct 120 ||| |||||||||||| | ||||| || ||||| ||||||||||||||||| || ||||| Sbjct: 418 atcaccataccaagaaatcttagtttttgagtcctcaacctatgggaatgttctggtgct 477 Query: 121 tgatggaattgttcagctgactgacaaggatgaatgtgcataccaggaaatggttactca 180 |||||| ||||| |||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 478 tgatggtattgtgcagctgaccgaaaaggatgaatgtgcataccaggaaatggttactca 537 Query: 181 ccttgcactgtgctcaattccatctcctaaaaatgttttggttgtcggaggtggtgatgg 240 |||| |||||||||| |||||||| || |||| ||||||||||||||||||||||||||| Sbjct: 538 ccttccactgtgctcgattccatcccccaaaagtgttttggttgtcggaggtggtgatgg 597 Query: 241 tggtgtactaagagaaatagccaagcatgattcagtggagagtatagacatatgtgagat 300 |||||| ||| |||||||||||| |||| |||||||||| || || |||||||| || Sbjct: 598 tggtgtgctacgagaaatagccagacatgcctcagtggagaacatcgatatatgtgaaat 657 Query: 301 tgatcagctagttattgatgtttgtaaagattttttcccacgtctatatgttggatataa 360 || ||||||||||||||||| ||||||||||| ||||||| |||| |||||||| || Sbjct: 658 agaccagctagttattgatgtctgtaaagatttcttcccacaactatctgttggattcaa 717 Query: 361 agaccctcgtgtcagacttcatgttggcgatgctgtagagttcttgagaaattctccaga 420 ||| || ||||| |||||||||||| || ||||| || |||||||||||| | || || Sbjct: 718 agatccccgtgttcaacttcatgttggtgacgctgtggatttcttgagaaatgcccctga 777 Query: 421 aggaaaatacgatgccattattgttgattcatcagatccaattgggccagcccaggaact 480 ||| ||||| ||||| || |||||||||||||| || |||||||||||||| ||||| || Sbjct: 778 agggaaatatgatgctatcattgttgattcatctgacccaattgggccagctcaggagct 837 Query: 481 tgtggagaagcccttttttcaggcaattgctag 513 |||||||||||||||||||||| |||||||||| Sbjct: 838 tgtggagaagcccttttttcagacaattgctag 870
>dbj|AK067301.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013105J05, full insert sequence Length = 1593 Score = 470 bits (237), Expect = e-129 Identities = 445/513 (86%), Gaps = 1/513 (0%) Strand = Plus / Plus Query: 1 ccaatgtggcactggggaggctcattcgttgaaagtagagaagattttgtaccagggaaa 60 |||||||||| |||| || |||||||| ||||||||||||| ||| |||| || || || Sbjct: 361 ccaatgtggc-ctggagaagctcattctctgaaagtagagaatattctgtatcaagggaa 419 Query: 61 atcgccataccaagaagttttagtattcgagtcttcaacctatgggaatgtccttgtgct 120 ||| |||||||||||| | ||||| || ||||| ||||||||||||||||| || ||||| Sbjct: 420 atcaccataccaagaaatcttagtttttgagtcctcaacctatgggaatgttctggtgct 479 Query: 121 tgatggaattgttcagctgactgacaaggatgaatgtgcataccaggaaatggttactca 180 |||||| ||||| |||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 480 tgatggtattgtgcagctgaccgaaaaggatgaatgtgcataccaggaaatggttactca 539 Query: 181 ccttgcactgtgctcaattccatctcctaaaaatgttttggttgtcggaggtggtgatgg 240 |||| |||||||||| |||||||| || |||| ||||||||||||||||||||||||||| Sbjct: 540 ccttccactgtgctcgattccatcccccaaaagtgttttggttgtcggaggtggtgatgg 599 Query: 241 tggtgtactaagagaaatagccaagcatgattcagtggagagtatagacatatgtgagat 300 |||||| ||| |||||||||||| |||| |||||||||| || || |||||||| || Sbjct: 600 tggtgtgctacgagaaatagccagacatgcctcagtggagaacatcgatatatgtgaaat 659 Query: 301 tgatcagctagttattgatgtttgtaaagattttttcccacgtctatatgttggatataa 360 || ||||||||||||||||| ||||||||||| ||||||| |||| |||||||| || Sbjct: 660 agaccagctagttattgatgtctgtaaagatttcttcccacaactatctgttggattcaa 719 Query: 361 agaccctcgtgtcagacttcatgttggcgatgctgtagagttcttgagaaattctccaga 420 ||| || ||||| |||||||||||| || ||||| || |||||||||||| | || || Sbjct: 720 agatccccgtgttcaacttcatgttggtgacgctgtggatttcttgagaaatgcccctga 779 Query: 421 aggaaaatacgatgccattattgttgattcatcagatccaattgggccagcccaggaact 480 ||| ||||| ||||| || |||||||||||||| || |||||||||||||| ||||| || Sbjct: 780 agggaaatatgatgctatcattgttgattcatctgacccaattgggccagctcaggagct 839 Query: 481 tgtggagaagcccttttttcaggcaattgctag 513 |||||||||||||||||||||| |||||||||| Sbjct: 840 tgtggagaagcccttttttcagacaattgctag 872
>gb|AY730048.1| Zea mays spermidine synthase (spesyn) mRNA, complete cds Length = 1571 Score = 460 bits (232), Expect = e-126 Identities = 439/508 (86%) Strand = Plus / Plus Query: 12 ctggggaggctcattcgttgaaagtagagaagattttgtaccagggaaaatcgccatacc 71 |||| ||||| ||||| |||||||| |||||||| |||| || || |||||||| |||| Sbjct: 307 ctggagaggcccattcattgaaagtggagaagatcttgtttcaagggaaatcgccttacc 366 Query: 72 aagaagttttagtattcgagtcttcaacctatgggaatgtccttgtgcttgatggaattg 131 ||||| ||||||| || ||||||||||||||||| ||||| |||||||||||||| || | Sbjct: 367 aagaaattttagtttttgagtcttcaacctatggaaatgttcttgtgcttgatggtatag 426 Query: 132 ttcagctgactgacaaggatgaatgtgcataccaggaaatggttactcaccttgcactgt 191 ||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 427 ttcagttgactgacaaggatgaatgcgcataccaggaaatggttactcaccttccactgt 486 Query: 192 gctcaattccatctcctaaaaatgttttggttgtcggaggtggtgatggtggtgtactaa 251 |||||||||| | || || |||||||||||||| ||||||||||||||||||||||| Sbjct: 487 gctcaattcctgcaccgaagaatgttttggttgttggaggtggtgatggtggtgtactgc 546 Query: 252 gagaaatagccaagcatgattcagtggagagtatagacatatgtgagattgatcagctag 311 | |||||||||| |||||||||||||| | ||| || ||||||||||||||||| |||| Sbjct: 547 gcgaaatagccagacatgattcagtggaaactattgatatatgtgagattgatcaactag 606 Query: 312 ttattgatgtttgtaaagattttttcccacgtctatatgttggatataaagaccctcgtg 371 |||||||||||| ||||| || || ||| ||| |||||| ||||| ||||||| Sbjct: 607 ttattgatgtttccaaagaattctttccaaacttatccattggattcaaagatcctcgtg 666 Query: 372 tcagacttcatgttggcgatgctgtagagttcttgagaaattctccagaaggaaaatacg 431 || ||||||||||||| |||||||| || ||| |||| |||||||| ||||||||||| | Sbjct: 667 tccgacttcatgttggtgatgctgttgatttcctgaggaattctcccgaaggaaaatatg 726 Query: 432 atgccattattgttgattcatcagatccaattgggccagcccaggaacttgtggagaagc 491 |||| |||||||| |||||||||||||||||||||||||| |||| ||| |||||||| | Sbjct: 727 atgctattattgtagattcatcagatccaattgggccagcacaggcactcgtggagaaac 786 Query: 492 ccttttttcaggcaattgctagggcttt 519 | ||| ||||| |||||||||| ||||| Sbjct: 787 cgtttattcagacaattgctagagcttt 814
>gb|AY106455.1| Zea mays PCO123401 mRNA sequence Length = 714 Score = 319 bits (161), Expect = 5e-84 Identities = 274/311 (88%), Gaps = 1/311 (0%) Strand = Plus / Plus Query: 12 ctggggaggctcattcgttgaaagtagagaagattttgtaccagggaaaatcgccatacc 71 |||| ||||| ||||| |||||||| |||||||| |||| || || |||||||| |||| Sbjct: 371 ctggagaggcccattcattgaaagtggagaagatcttgtttcaagggaaatcgccttacc 430 Query: 72 aagaagttttagtattcgagtcttcaacctatgggaatgtccttgtgcttgatggaattg 131 ||||| ||||||| || ||||||||||||||||| ||||| |||||||||||||| || | Sbjct: 431 aagaaattttagtttttgagtcttcaacctatggaaatgttcttgtgcttgatggtatag 490 Query: 132 ttcagctgactgacaaggatgaatgtgcataccaggaaatggttactcaccttgcactgt 191 ||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 491 ttcagttgactgacaaggatgaatgcgcataccaggaaatggttactcaccttccactgt 550 Query: 192 gctcaattccatctcctaaaaatgttttggttgtcggaggtggtgatggtggtgtactaa 251 |||||||||| | || || |||||||||||||| ||||||||||||||||||||||| Sbjct: 551 gctcaattcctgcaccgaagaatgttttggttgttggaggtggtgatggtggtgtactgc 610 Query: 252 gagaaatagccaagcatgattcagtggagagtatagacatatgtgagattgatcagctag 311 | |||||||||| |||||||||||||| | ||| || ||||||||||||||||| |||| Sbjct: 611 gcgaaatagccagacatgattcagtggaaactatngatatatgtgagattgatca-ctag 669 Query: 312 ttattgatgtt 322 |||| |||||| Sbjct: 670 ttatngatgtt 680
>gb|AY105941.1| Zea mays PCO135078 mRNA sequence Length = 1019 Score = 226 bits (114), Expect = 6e-56 Identities = 243/286 (84%) Strand = Plus / Plus Query: 234 gtgatggtggtgtactaagagaaatagccaagcatgattcagtggagagtatagacatat 293 |||||||||||||||| | |||||||||| |||||||||||||| | ||| || |||| Sbjct: 1 gtgatggtggtgtactgcgcgaaatagccagacatgattcagtggaaactattgatatat 60 Query: 294 gtgagattgatcagctagttattgatgtttgtaaagattttttcccacgtctatatgttg 353 ||||||||||||| |||||||||||||||| ||||| || || ||| ||| ||| Sbjct: 61 gtgagattgatcaactagttattgatgtttccaaagaattctttccaaacttatccattg 120 Query: 354 gatataaagaccctcgtgtcagacttcatgttggcgatgctgtagagttcttgagaaatt 413 ||| ||||| ||||||||| ||||||||||||| |||||||| || ||| |||| |||| Sbjct: 121 gattcaaagatcctcgtgtccgacttcatgttggtgatgctgttgatttcctgaggaatt 180 Query: 414 ctccagaaggaaaatacgatgccattattgttgattcatcagatccaattgggccagccc 473 |||| ||||||||||| ||||| |||||||| |||||||||||||||||||||||||| | Sbjct: 181 ctcccgaaggaaaatatgatgctattattgtagattcatcagatccaattgggccagcac 240 Query: 474 aggaacttgtggagaagcccttttttcaggcaattgctagggcttt 519 ||| ||| |||||||| || ||| ||||| |||||||||| ||||| Sbjct: 241 aggcactcgtggagaaaccgtttattcagacaattgctagagcttt 286
>gb|AY107299.1| Zea mays PCO081586 mRNA sequence Length = 609 Score = 218 bits (110), Expect = 1e-53 Identities = 164/182 (90%) Strand = Plus / Plus Query: 38 gagaagattttgtaccagggaaaatcgccataccaagaagttttagtattcgagtcttca 97 |||||||| || |||||||| ||||||| |||||||||||| ||||| |||||||| || Sbjct: 428 gagaagatcttataccaggggaaatcgctataccaagaagtcttagtcttcgagtcgtcg 487 Query: 98 acctatgggaatgtccttgtgcttgatggaattgttcagctgactgacaaggatgaatgt 157 |||||||| || ||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 488 acctatggtaaagtccttgtgcttgatggtattgttcagttgactgacaaggatgaatgt 547 Query: 158 gcataccaggaaatggttactcaccttgcactgtgctcaattccatctcctaaaaatgtt 217 ||||||||||||||| |||||||||| |||| |||||||||||||| |||||||| ||| Sbjct: 548 gcataccaggaaatgattactcacctgccactttgctcaattccatcccctaaaaaagtt 607 Query: 218 tt 219 || Sbjct: 608 tt 609
>gb|DQ103516.1| Zea mays spermidine synthase mRNA, partial cds Length = 329 Score = 188 bits (95), Expect = 1e-44 Identities = 149/167 (89%) Strand = Plus / Plus Query: 17 gaggctcattcgttgaaagtagagaagattttgtaccagggaaaatcgccataccaagaa 76 ||||| ||||| |||||||| |||||||| |||| || || |||||||| ||||||||| Sbjct: 161 gaggcccattcattgaaagtggagaagatcttgtttcaagggaaatcgccttaccaagaa 220 Query: 77 gttttagtattcgagtcttcaacctatgggaatgtccttgtgcttgatggaattgttcag 136 ||||||| || ||||||||||||||||| ||||| |||||||||||||| || |||||| Sbjct: 221 attttagtttttgagtcttcaacctatggaaatgttcttgtgcttgatggtatagttcag 280 Query: 137 ctgactgacaaggatgaatgtgcataccaggaaatggttactcacct 183 ||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 281 ttgactgacaaggatgaatgcgcataccaggaaatggttactcacct 327
>gb|AY110118.1| Zea mays CL7038_1 mRNA sequence Length = 1039 Score = 170 bits (86), Expect = 3e-39 Identities = 176/206 (85%) Strand = Plus / Minus Query: 287 gacatatgtgagattgatcagctagttattgatgtttgtaaagattttttcccacgtcta 346 ||||||||||||||||||||||| ||||||||||| || |||||||| ||||||| | Sbjct: 1037 gacatatgtgagattgatcagctggttattgatgtgtgcaaagatttcttcccacacttg 978 Query: 347 tatgttggatataaagaccctcgtgtcagacttcatgttggcgatgctgtagagttcttg 406 | |||||||| | |||| |||||||| ||||||||| ||||||||||| ||||||||| Sbjct: 977 tctgttggatttcaagatcctcgtgttcaacttcatgtcggcgatgctgtggagttcttg 918 Query: 407 agaaattctccagaaggaaaatacgatgccattattgttgattcatcagatccaattggg 466 |||||| |||| || || | ||| ||||| || ||||||||||| ||||||||||| ||| Sbjct: 917 agaaatgctcctgaggggacatatgatgctatcattgttgattcgtcagatccaataggg 858 Query: 467 ccagcccaggaacttgtggagaagcc 492 || || ||||||||||| |||||||| Sbjct: 857 cctgctcaggaacttgtagagaagcc 832
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 157 bits (79), Expect = 4e-35 Identities = 106/115 (92%) Strand = Plus / Plus Query: 90 agtcttcaacctatgggaatgtccttgtgcttgatggaattgttcagctgactgacaagg 149 |||| ||||||||||||||||| || ||||||||||| ||||| |||||||| || |||| Sbjct: 19268650 agtcctcaacctatgggaatgttctggtgcttgatggtattgtgcagctgaccgaaaagg 19268709 Query: 150 atgaatgtgcataccaggaaatggttactcaccttgcactgtgctcaattccatc 204 ||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 19268710 atgaatgtgcataccaggaaatggttactcaccttccactgtgctcgattccatc 19268764 Score = 109 bits (55), Expect = 9e-21 Identities = 94/107 (87%) Strand = Plus / Plus Query: 215 gttttggttgtcggaggtggtgatggtggtgtactaagagaaatagccaagcatgattca 274 |||||||||||||||||||||||||||||||| ||| |||||||||||| |||| ||| Sbjct: 19269029 gttttggttgtcggaggtggtgatggtggtgtgctacgagaaatagccagacatgcctca 19269088 Query: 275 gtggagagtatagacatatgtgagattgatcagctagttattgatgt 321 ||||||| || || |||||||| || || ||||||||||||||||| Sbjct: 19269089 gtggagaacatcgatatatgtgaaatagaccagctagttattgatgt 19269135 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 464 gggccagcccaggaacttgtggagaagcccttttttcaggcaattgctag 513 |||||||| ||||| |||||||||||||||||||||||| |||||||||| Sbjct: 19269948 gggccagctcaggagcttgtggagaagcccttttttcagacaattgctag 19269997 Score = 60.0 bits (30), Expect = 8e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 392 gctgtagagttcttgagaaattctccagaaggaaaatacgatgccattattgttgattca 451 ||||| || |||||||||||| | || ||||| ||||| ||||| || |||||||||||| Sbjct: 19269587 gctgtggatttcttgagaaatgcccctgaagggaaatatgatgctatcattgttgattca 19269646 Query: 452 tcagatccaattgg 465 || || |||||||| Sbjct: 19269647 tctgacccaattgg 19269660 Score = 50.1 bits (25), Expect = 0.007 Identities = 49/57 (85%) Strand = Plus / Plus Query: 20 gctcattcgttgaaagtagagaagattttgtaccagggaaaatcgccataccaagaa 76 |||||||| ||||||||||||| ||| |||| || || ||||| |||||||||||| Sbjct: 19268471 gctcattctctgaaagtagagaatattctgtatcaagggaaatcaccataccaagaa 19268527 Score = 42.1 bits (21), Expect = 1.8 Identities = 54/65 (83%) Strand = Plus / Plus Query: 323 tgtaaagattttttcccacgtctatatgttggatataaagaccctcgtgtcagacttcat 382 ||||||||||| ||||||| |||| |||||||| ||||| || ||||| ||||||| Sbjct: 19269220 tgtaaagatttcttcccacaactatctgttggattcaaagatccccgtgttcaacttcat 19269279 Query: 383 gttgg 387 ||||| Sbjct: 19269280 gttgg 19269284
>dbj|AP004745.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0001B01 Length = 147585 Score = 157 bits (79), Expect = 4e-35 Identities = 106/115 (92%) Strand = Plus / Plus Query: 90 agtcttcaacctatgggaatgtccttgtgcttgatggaattgttcagctgactgacaagg 149 |||| ||||||||||||||||| || ||||||||||| ||||| |||||||| || |||| Sbjct: 106414 agtcctcaacctatgggaatgttctggtgcttgatggtattgtgcagctgaccgaaaagg 106473 Query: 150 atgaatgtgcataccaggaaatggttactcaccttgcactgtgctcaattccatc 204 ||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 106474 atgaatgtgcataccaggaaatggttactcaccttccactgtgctcgattccatc 106528 Score = 109 bits (55), Expect = 9e-21 Identities = 94/107 (87%) Strand = Plus / Plus Query: 215 gttttggttgtcggaggtggtgatggtggtgtactaagagaaatagccaagcatgattca 274 |||||||||||||||||||||||||||||||| ||| |||||||||||| |||| ||| Sbjct: 106793 gttttggttgtcggaggtggtgatggtggtgtgctacgagaaatagccagacatgcctca 106852 Query: 275 gtggagagtatagacatatgtgagattgatcagctagttattgatgt 321 ||||||| || || |||||||| || || ||||||||||||||||| Sbjct: 106853 gtggagaacatcgatatatgtgaaatagaccagctagttattgatgt 106899 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 464 gggccagcccaggaacttgtggagaagcccttttttcaggcaattgctag 513 |||||||| ||||| |||||||||||||||||||||||| |||||||||| Sbjct: 107712 gggccagctcaggagcttgtggagaagcccttttttcagacaattgctag 107761 Score = 60.0 bits (30), Expect = 8e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 392 gctgtagagttcttgagaaattctccagaaggaaaatacgatgccattattgttgattca 451 ||||| || |||||||||||| | || ||||| ||||| ||||| || |||||||||||| Sbjct: 107351 gctgtggatttcttgagaaatgcccctgaagggaaatatgatgctatcattgttgattca 107410 Query: 452 tcagatccaattgg 465 || || |||||||| Sbjct: 107411 tctgacccaattgg 107424 Score = 50.1 bits (25), Expect = 0.007 Identities = 49/57 (85%) Strand = Plus / Plus Query: 20 gctcattcgttgaaagtagagaagattttgtaccagggaaaatcgccataccaagaa 76 |||||||| ||||||||||||| ||| |||| || || ||||| |||||||||||| Sbjct: 106235 gctcattctctgaaagtagagaatattctgtatcaagggaaatcaccataccaagaa 106291 Score = 42.1 bits (21), Expect = 1.8 Identities = 54/65 (83%) Strand = Plus / Plus Query: 323 tgtaaagattttttcccacgtctatatgttggatataaagaccctcgtgtcagacttcat 382 ||||||||||| ||||||| |||| |||||||| ||||| || ||||| ||||||| Sbjct: 106984 tgtaaagatttcttcccacaactatctgttggattcaaagatccccgtgttcaacttcat 107043 Query: 383 gttgg 387 ||||| Sbjct: 107044 gttgg 107048
>emb|AJ251302.1|OSA251302 Oryza sativa partial mRNA for putative aminopropyltransferase (spdSyn gene) Length = 883 Score = 147 bits (74), Expect = 4e-32 Identities = 122/138 (88%) Strand = Plus / Plus Query: 376 acttcatgttggcgatgctgtagagttcttgagaaattctccagaaggaaaatacgatgc 435 |||||||||||| || ||||| || |||||||||||| | || ||||| ||||| ||||| Sbjct: 26 acttcatgttggtgacgctgtggatttcttgagaaatgcccctgaagggaaatatgatgc 85 Query: 436 cattattgttgattcatcagatccaattgggccagcccaggaacttgtggagaagccctt 495 || |||||||||||||| || |||||||||||||| ||||| ||||||||||||||||| Sbjct: 86 tatcattgttgattcatctgacccaattgggccagctcaggagcttgtggagaagccctt 145 Query: 496 ttttcaggcaattgctag 513 ||||||| |||||||||| Sbjct: 146 ttttcagacaattgctag 163
>gb|DQ247922.1| Zea mays spermidine synthase 2 gene, partial cds Length = 892 Score = 139 bits (70), Expect = 1e-29 Identities = 88/94 (93%) Strand = Plus / Plus Query: 90 agtcttcaacctatgggaatgtccttgtgcttgatggaattgttcagctgactgacaagg 149 |||||||||||||||| ||||| |||||||||||||| || |||||| |||||||||||| Sbjct: 797 agtcttcaacctatggaaatgttcttgtgcttgatggtatagttcagttgactgacaagg 856 Query: 150 atgaatgtgcataccaggaaatggttactcacct 183 ||||||| |||||||||||||||||||||||||| Sbjct: 857 atgaatgcgcataccaggaaatggttactcacct 890
>dbj|AK065153.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002B15, full insert sequence Length = 1293 Score = 125 bits (63), Expect = 2e-25 Identities = 108/123 (87%) Strand = Plus / Plus Query: 377 cttcatgttggcgatgctgtagagttcttgagaaattctccagaaggaaaatacgatgcc 436 ||||||||||| |||||||| |||||||| || ||| |||| ||||| | ||| ||||| Sbjct: 491 cttcatgttggtgatgctgtggagttcttaaggaatgctcctgaagggacatatgatgct 550 Query: 437 attattgttgattcatcagatccaattgggccagcccaggaacttgtggagaagcccttt 496 |||||||| ||||||||||| || |||||||| ||||||||||||||||||||||| ||| Sbjct: 551 attattgtcgattcatcagacccgattgggcctgcccaggaacttgtggagaagccattt 610 Query: 497 ttt 499 ||| Sbjct: 611 ttt 613 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 17 gaggctcattcgttgaaagtagagaagattttgtaccagggaaaatcgccataccaagaa 76 ||||| ||||| ||||||| |||||||| ||||| ||||| || || |||||||||||| Sbjct: 403 gaggcccattcactgaaagttgagaagatcttgtatcaggggaagtcaccataccaagaa 462 Query: 77 gttttagtattcgagtc 93 |||||||| || ||||| Sbjct: 463 gttttagtttttgagtc 479
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 117 bits (59), Expect = 4e-23 Identities = 101/115 (87%) Strand = Plus / Minus Query: 90 agtcttcaacctatgggaatgtccttgtgcttgatggaattgttcagctgactgacaagg 149 |||| ||||||||||| || || ||||| |||||||| ||||| ||| ||||||| |||| Sbjct: 8728626 agtcctcaacctatggaaaagttcttgtccttgatggtattgtccagttgactgataagg 8728567 Query: 150 atgaatgtgcataccaggaaatggttactcaccttgcactgtgctcaattccatc 204 |||||||||| |||||||||||| ||||||||||| | || |||||||||||||| Sbjct: 8728566 atgaatgtgcgtaccaggaaatgattactcaccttccgctttgctcaattccatc 8728512 Score = 63.9 bits (32), Expect = 5e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 17 gaggctcattcgttgaaagtagagaagattttgtaccagggaaaatcgccataccaagaa 76 ||||| ||||| ||||||| |||||||| ||||| ||||| || || |||||||||||| Sbjct: 8728804 gaggcccattcactgaaagttgagaagatcttgtatcaggggaagtcaccataccaagaa 8728745 Query: 77 gttttagt 84 |||||||| Sbjct: 8728744 gttttagt 8728737 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 290 atatgtgagattgatcagctagttattgatgt 321 |||||||| ||||||||||||||||||||||| Sbjct: 8728269 atatgtgaaattgatcagctagttattgatgt 8728238 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 464 gggccagcccaggaacttgtggagaagccctttttt 499 ||||| ||||||||||||||||||||||| |||||| Sbjct: 8727602 gggcctgcccaggaacttgtggagaagccatttttt 8727567 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 392 gctgtagagttcttgagaaattctccagaaggaaaatacgatgccattattgttgattca 451 ||||| |||||||| || ||| |||| ||||| | ||| ||||| |||||||| |||||| Sbjct: 8727966 gctgtggagttcttaaggaatgctcctgaagggacatatgatgctattattgtcgattca 8727907 Query: 452 tcagatccaattgg 465 ||||| || ||||| Sbjct: 8727906 tcagacccgattgg 8727893 Score = 50.1 bits (25), Expect = 0.007 Identities = 61/73 (83%) Strand = Plus / Minus Query: 320 gtttgtaaagattttttcccacgtctatatgttggatataaagaccctcgtgtcagactt 379 |||||||||||||| |||||| | ||| |||||||| ||||| |||||||| | ||| Sbjct: 8728159 gtttgtaaagatttcttcccagatttatctgttggattcaaagatcctcgtgttcggctt 8728100 Query: 380 catgttggcgatg 392 |||||||| |||| Sbjct: 8728099 catgttggtgatg 8728087 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 215 gttttggttgtcggaggtggtgatggtgg 243 ||||||||| | ||||||||||||||||| Sbjct: 8728344 gttttggttattggaggtggtgatggtgg 8728316
>dbj|AP004875.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0463G12 Length = 145403 Score = 117 bits (59), Expect = 4e-23 Identities = 101/115 (87%) Strand = Plus / Minus Query: 90 agtcttcaacctatgggaatgtccttgtgcttgatggaattgttcagctgactgacaagg 149 |||| ||||||||||| || || ||||| |||||||| ||||| ||| ||||||| |||| Sbjct: 135673 agtcctcaacctatggaaaagttcttgtccttgatggtattgtccagttgactgataagg 135614 Query: 150 atgaatgtgcataccaggaaatggttactcaccttgcactgtgctcaattccatc 204 |||||||||| |||||||||||| ||||||||||| | || |||||||||||||| Sbjct: 135613 atgaatgtgcgtaccaggaaatgattactcaccttccgctttgctcaattccatc 135559 Score = 63.9 bits (32), Expect = 5e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 17 gaggctcattcgttgaaagtagagaagattttgtaccagggaaaatcgccataccaagaa 76 ||||| ||||| ||||||| |||||||| ||||| ||||| || || |||||||||||| Sbjct: 135851 gaggcccattcactgaaagttgagaagatcttgtatcaggggaagtcaccataccaagaa 135792 Query: 77 gttttagt 84 |||||||| Sbjct: 135791 gttttagt 135784 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 290 atatgtgagattgatcagctagttattgatgt 321 |||||||| ||||||||||||||||||||||| Sbjct: 135316 atatgtgaaattgatcagctagttattgatgt 135285 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 464 gggccagcccaggaacttgtggagaagccctttttt 499 ||||| ||||||||||||||||||||||| |||||| Sbjct: 134649 gggcctgcccaggaacttgtggagaagccatttttt 134614 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 392 gctgtagagttcttgagaaattctccagaaggaaaatacgatgccattattgttgattca 451 ||||| |||||||| || ||| |||| ||||| | ||| ||||| |||||||| |||||| Sbjct: 135013 gctgtggagttcttaaggaatgctcctgaagggacatatgatgctattattgtcgattca 134954 Query: 452 tcagatccaattgg 465 ||||| || ||||| Sbjct: 134953 tcagacccgattgg 134940 Score = 50.1 bits (25), Expect = 0.007 Identities = 61/73 (83%) Strand = Plus / Minus Query: 320 gtttgtaaagattttttcccacgtctatatgttggatataaagaccctcgtgtcagactt 379 |||||||||||||| |||||| | ||| |||||||| ||||| |||||||| | ||| Sbjct: 135206 gtttgtaaagatttcttcccagatttatctgttggattcaaagatcctcgtgttcggctt 135147 Query: 380 catgttggcgatg 392 |||||||| |||| Sbjct: 135146 catgttggtgatg 135134 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 215 gttttggttgtcggaggtggtgatggtgg 243 ||||||||| | ||||||||||||||||| Sbjct: 135391 gttttggttattggaggtggtgatggtgg 135363
>dbj|AP006844.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0052K15 Length = 156250 Score = 117 bits (59), Expect = 4e-23 Identities = 101/115 (87%) Strand = Plus / Minus Query: 90 agtcttcaacctatgggaatgtccttgtgcttgatggaattgttcagctgactgacaagg 149 |||| ||||||||||| || || ||||| |||||||| ||||| ||| ||||||| |||| Sbjct: 27705 agtcctcaacctatggaaaagttcttgtccttgatggtattgtccagttgactgataagg 27646 Query: 150 atgaatgtgcataccaggaaatggttactcaccttgcactgtgctcaattccatc 204 |||||||||| |||||||||||| ||||||||||| | || |||||||||||||| Sbjct: 27645 atgaatgtgcgtaccaggaaatgattactcaccttccgctttgctcaattccatc 27591 Score = 63.9 bits (32), Expect = 5e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 17 gaggctcattcgttgaaagtagagaagattttgtaccagggaaaatcgccataccaagaa 76 ||||| ||||| ||||||| |||||||| ||||| ||||| || || |||||||||||| Sbjct: 27883 gaggcccattcactgaaagttgagaagatcttgtatcaggggaagtcaccataccaagaa 27824 Query: 77 gttttagt 84 |||||||| Sbjct: 27823 gttttagt 27816 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 290 atatgtgagattgatcagctagttattgatgt 321 |||||||| ||||||||||||||||||||||| Sbjct: 27348 atatgtgaaattgatcagctagttattgatgt 27317 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 464 gggccagcccaggaacttgtggagaagccctttttt 499 ||||| ||||||||||||||||||||||| |||||| Sbjct: 26681 gggcctgcccaggaacttgtggagaagccatttttt 26646 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 392 gctgtagagttcttgagaaattctccagaaggaaaatacgatgccattattgttgattca 451 ||||| |||||||| || ||| |||| ||||| | ||| ||||| |||||||| |||||| Sbjct: 27045 gctgtggagttcttaaggaatgctcctgaagggacatatgatgctattattgtcgattca 26986 Query: 452 tcagatccaattgg 465 ||||| || ||||| Sbjct: 26985 tcagacccgattgg 26972 Score = 50.1 bits (25), Expect = 0.007 Identities = 61/73 (83%) Strand = Plus / Minus Query: 320 gtttgtaaagattttttcccacgtctatatgttggatataaagaccctcgtgtcagactt 379 |||||||||||||| |||||| | ||| |||||||| ||||| |||||||| | ||| Sbjct: 27238 gtttgtaaagatttcttcccagatttatctgttggattcaaagatcctcgtgttcggctt 27179 Query: 380 catgttggcgatg 392 |||||||| |||| Sbjct: 27178 catgttggtgatg 27166 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 215 gttttggttgtcggaggtggtgatggtgg 243 ||||||||| | ||||||||||||||||| Sbjct: 27423 gttttggttattggaggtggtgatggtgg 27395
>gb|DQ173768.1| Populus maximowiczii x Populus nigra spermidine synthase 1 (spds1) mRNA, partial cds Length = 433 Score = 91.7 bits (46), Expect = 2e-15 Identities = 112/134 (83%) Strand = Plus / Plus Query: 113 cttgtgcttgatggaattgttcagctgactgacaaggatgaatgtgcataccaggaaatg 172 ||||| |||||||| |||||||| ||||||| || |||||||| ||||||||||| ||| Sbjct: 4 cttgttcttgatggtattgttcaattgactgagaaagatgaatgcgcataccaggagatg 63 Query: 173 gttactcaccttgcactgtgctcaattccatctcctaaaaatgttttggttgtcggaggt 232 | | || ||| | || || || ||||||||||| |||| |||||||||||| || ||| Sbjct: 64 atcgcccatcttcccctttgttcgattccatctcccaaaactgttttggttgttggtggt 123 Query: 233 ggtgatggtggtgt 246 |||||||||||||| Sbjct: 124 ggtgatggtggtgt 137
>gb|BT014416.1| Lycopersicon esculentum clone 133724F, mRNA sequence Length = 1353 Score = 73.8 bits (37), Expect = 5e-10 Identities = 181/229 (79%) Strand = Plus / Plus Query: 30 tgaaagtagagaagattttgtaccagggaaaatcgccataccaagaagttttagtattcg 89 |||||||||| ||| |||||| | ||||||| || || ||| || ||||| || || | Sbjct: 558 tgaaagtagaaaaggttttgttcaagggaaagtcagaattccaggaggttttggtttttg 617 Query: 90 agtcttcaacctatgggaatgtccttgtgcttgatggaattgttcagctgactgacaagg 149 ||||| || ||||||| || || || ||||| ||||| ||||||||| ||||||| || | Sbjct: 618 agtctgcatcctatggaaaagttctagtgctagatggcattgttcagttgactgagaaag 677 Query: 150 atgaatgtgcataccaggaaatggttactcaccttgcactgtgctcaattccatctccta 209 |||||||||| || ||||| ||| | | || ||| | || || ||||| |||||||| Sbjct: 678 atgaatgtgcctatcaggagatgatagcccatcttcctctttgttcaatcaaatctccta 737 Query: 210 aaaatgttttggttgtcggaggtggtgatggtggtgtactaagagaaat 258 | || ||| ||||||| || |||||||||||||| || ||||| ||||| Sbjct: 738 agaaggttctggttgttgggggtggtgatggtggagttctaagggaaat 786 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 365 cctcgtgtcagacttcatgttggcgatgctgt 396 |||||||||| ||||||||||| |||||||| Sbjct: 893 cctcgtgtcaatcttcatgttggtgatgctgt 924
>gb|AY335900.1| Lycopersicon esculentum putative spermine synthase (SPM1) mRNA, complete cds Length = 1162 Score = 73.8 bits (37), Expect = 5e-10 Identities = 181/229 (79%) Strand = Plus / Plus Query: 30 tgaaagtagagaagattttgtaccagggaaaatcgccataccaagaagttttagtattcg 89 |||||||||| ||| |||||| | ||||||| || || ||| || ||||| || || | Sbjct: 243 tgaaagtagaaaaggttttgttcaagggaaagtcagaattccaggaggttttggtttttg 302 Query: 90 agtcttcaacctatgggaatgtccttgtgcttgatggaattgttcagctgactgacaagg 149 ||||| || ||||||| || || || ||||| ||||| ||||||||| ||||||| || | Sbjct: 303 agtctgcatcctatggaaaagttctagtgctagatggcattgttcagttgactgagaaag 362 Query: 150 atgaatgtgcataccaggaaatggttactcaccttgcactgtgctcaattccatctccta 209 |||||||||| || ||||| ||| | | || ||| | || || ||||| |||||||| Sbjct: 363 atgaatgtgcctatcaggagatgatagcccatcttcctctttgttcaatcaaatctccta 422 Query: 210 aaaatgttttggttgtcggaggtggtgatggtggtgtactaagagaaat 258 | || ||| ||||||| || |||||||||||||| || ||||| ||||| Sbjct: 423 agaaggttctggttgttgggggtggtgatggtggagttctaagggaaat 471 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 365 cctcgtgtcagacttcatgttggcgatgctgt 396 |||||||||| ||||||||||| |||||||| Sbjct: 578 cctcgtgtcaatcttcatgttggtgatgctgt 609
>emb|CT573028.11| M.truncatula DNA sequence from clone MTH2-51N20 on chromosome 3, complete sequence Length = 116350 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 101 tatgggaatgtccttgtgcttgatggaattgttcagctgactgacaaggatgaatgtgca 160 |||||||| || || || |||||||| ||||||||| ||||||| |||||||||||||| Sbjct: 39104 tatgggaaagttctcgtacttgatgggattgttcagttgactgagaaggatgaatgtgct 39163 Query: 161 taccagga 168 |||||||| Sbjct: 39164 taccagga 39171
>emb|Y08252.1|DSSS1 D.stramonium mRNA for spermidine synthase 1 Length = 1190 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Plus Query: 148 ggatgaatgtgcataccaggaaatggttactcaccttgcactgtgctcaattccatctcc 207 |||||||||||| ||||| |||||| | ||||| || |||| |||||||||||| || Sbjct: 255 ggatgaatgtgcttaccaagaaatgatcactcatctcccactttgctcaattccaaaccc 314 Query: 208 taaaaatgttttggttgtcggaggtggtgatggtggtgt 246 ||||| || |||||| | ||||| |||||||||||||| Sbjct: 315 caaaaaggtgttggttattggaggaggtgatggtggtgt 353 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 atagacatatgtgagattga 303 |||||||||||||||||||| Sbjct: 391 atagacatatgtgagattga 410
>emb|AM158913.1| Plantago major partial mRNA for spermidine synthase (spds1 gene) Length = 689 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 438 ttattgttgattcatcagatccaattgggccagcccaggaacttgtggagaagccctttt 497 |||||||||||||||||||||| | || || || || ||||||||||||||||| |||| Sbjct: 232 ttattgttgattcatcagatcctgtgggtcctgcacaagaacttgtggagaagccatttt 291 Query: 498 tt 499 || Sbjct: 292 tt 293
>dbj|AB204520.1| Malus sylvestris SPMS mRNA for spermine synthase, complete cds Length = 1571 Score = 58.0 bits (29), Expect = 3e-05 Identities = 83/101 (82%) Strand = Plus / Plus Query: 68 taccaagaagttttagtattcgagtcttcaacctatgggaatgtccttgtgcttgatgga 127 |||||||| |||| || || ||||| |||| ||||| || || ||||| |||||||| Sbjct: 531 taccaagagattttggtgtttgagtcctcaatatatggaaaagtgcttgttcttgatggc 590 Query: 128 attgttcagctgactgacaaggatgaatgtgcataccagga 168 ||| | ||||||| ||| || |||||||||||||||||||| Sbjct: 591 attatccagctgagtgagaaagatgaatgtgcataccagga 631
>gb|BT014110.1| Lycopersicon esculentum clone 133214F, mRNA sequence Length = 1174 Score = 54.0 bits (27), Expect = 5e-04 Identities = 81/99 (81%) Strand = Plus / Plus Query: 148 ggatgaatgtgcataccaggaaatggttactcaccttgcactgtgctcaattccatctcc 207 |||||||||||| ||||| |||||| | ||||| || |||| |||||||||||| || Sbjct: 244 ggatgaatgtgcttaccaagaaatgatcactcatctcccactttgctcaattccaaaccc 303 Query: 208 taaaaatgttttggttgtcggaggtggtgatggtggtgt 246 | ||| || |||||| | ||||| |||||||||||||| Sbjct: 304 cagaaaggtgttggttattggaggaggtgatggtggtgt 342 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 atagacatatgtgagattga 303 |||||||||||||||||||| Sbjct: 380 atagacatatgtgagattga 399
>dbj|AB240539.1| Vitis vinifera pVvSPMS mRNA for spermine synthase, partial cds Length = 310 Score = 54.0 bits (27), Expect = 5e-04 Identities = 132/167 (79%) Strand = Plus / Plus Query: 293 tgtgagattgatcagctagttattgatgtttgtaaagattttttcccacgtctatatgtt 352 |||||||| ||| || | ||||| ||||| ||||| | |||||||||| |||| ||| Sbjct: 144 tgtgagatagataagatggttatagatgtgtgtaagaagtttttcccacagttatacgtt 203 Query: 353 ggatataaagaccctcgtgtcagacttcatgttggcgatgctgtagagttcttgagaaat 412 || | | |||||||||||||| ||||||||||| |||||||| || || | ||| || Sbjct: 204 gggtttgaagaccctcgtgtccagcttcatgttggggatgctgttgaatttcttagacat 263 Query: 413 tctccagaaggaaaatacgatgccattattgttgattcatcagatcc 459 || ||||| || || ||||| ||||||||||||||||| ||||| Sbjct: 264 gtacctgaagggaagtatgatgcaattattgttgattcatctgatcc 310
>dbj|AB006691.1| Hyoscyamus niger mRNA for spermidine synthase 2, complete cds Length = 1263 Score = 54.0 bits (27), Expect = 5e-04 Identities = 81/99 (81%) Strand = Plus / Plus Query: 148 ggatgaatgtgcataccaggaaatggttactcaccttgcactgtgctcaattccatctcc 207 |||||||||||| ||||| |||||| | ||||| || |||| ||||| |||||| || Sbjct: 302 ggatgaatgtgcttaccaagaaatgatcactcatctcccactttgctcgattccaaaccc 361 Query: 208 taaaaatgttttggttgtcggaggtggtgatggtggtgt 246 ||||| || |||||| | ||||| |||||||||||||| Sbjct: 362 caaaaaggtgttggttattggaggaggtgatggtggtgt 400
>ref|XM_641917.1| Dictyostelium discoideum hypothetical protein (DDB0191167), partial mRNA Length = 855 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 214 tgttttggttgtcggaggtggtgatggtggtgtactaagaga 255 ||||||||| || || |||||||||||||||||| ||||||| Sbjct: 252 tgttttggtagttggtggtggtgatggtggtgtattaagaga 293
>gb|AF069757.1|AF069757 Dictyostelium discoideum spermidine synthase gene, complete cds Length = 3280 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 214 tgttttggttgtcggaggtggtgatggtggtgtactaagaga 255 ||||||||| || || |||||||||||||||||| ||||||| Sbjct: 1469 tgttttggtagttggtggtggtgatggtggtgtattaagaga 1510
>dbj|AB072915.2| Malus x domestica MdSPDS1 mRNA forspermidine synthase, complete cds Length = 1407 Score = 52.0 bits (26), Expect = 0.002 Identities = 83/102 (81%) Strand = Plus / Plus Query: 148 ggatgaatgtgcataccaggaaatggttactcaccttgcactgtgctcaattccatctcc 207 |||||||||||| || || |||||| ||||||| || |||| |||||||||||| ||| Sbjct: 449 ggatgaatgtgcctatcaagaaatgattactcatctcccactctgctcaattccaaatcc 508 Query: 208 taaaaatgttttggttgtcggaggtggtgatggtggtgtact 249 || || ||||||||| | || || || |||||||| ||||| Sbjct: 509 aaagaaggttttggttattggtggaggagatggtggggtact 550
>gb|DQ173769.1| Populus maximowiczii x Populus nigra spermidine synthase 2 (spds2) mRNA, partial cds Length = 473 Score = 48.1 bits (24), Expect = 0.029 Identities = 45/52 (86%) Strand = Plus / Plus Query: 148 ggatgaatgtgcataccaggaaatggttactcaccttgcactgtgctcaatt 199 ||||||||||||||| || |||||| | ||||||||| | || ||||||||| Sbjct: 64 ggatgaatgtgcatatcaagaaatgatcactcaccttcctctttgctcaatt 115
>gb|AC131652.2| Mus musculus BAC clone RP23-216A20 from 16, complete sequence Length = 184989 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 214 tgttttggttgtcggaggtggtgatggtggtg 245 |||||| ||||| ||||||||||||||||||| Sbjct: 43814 tgttttcgttgttggaggtggtgatggtggtg 43783
>ref|XM_451945.1| Kluyveromyces lactis NRRL Y-1140, KLLA0B09372g predicted mRNA Length = 882 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Plus Query: 215 gttttggttgtcggaggtggtgatggtggtgtactaagagaaatagccaagcatgattc 273 ||||||||| |||| ||||| ||||| ||||| | |||||||| | |||||||||||| Sbjct: 271 gttttggttatcggtggtggcgatggcggtgtcttgagagaaattgtcaagcatgattc 329
>gb|AE014301.1| Homo sapiens chromosome 13q34 schizophrenia region contig 2 section 1 of 3 of the complete sequence Length = 106598 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 216 ttttggttgtcggaggtggtgatggtggtgt 246 |||||||||| || ||||||||||||||||| Sbjct: 44792 ttttggttgttggtggtggtgatggtggtgt 44762
>emb|AL356778.13| Human DNA sequence from clone RP11-75C5 on chromosome 13 Contains the 5' end of the gene for a novel protein (ortholog of rat putative four repeat ion channel) and a CpG island, complete sequence Length = 87397 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 216 ttttggttgtcggaggtggtgatggtggtgt 246 |||||||||| || ||||||||||||||||| Sbjct: 48489 ttttggttgttggtggtggtgatggtggtgt 48459
>emb|CR382122.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome B of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1320834 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Plus Query: 215 gttttggttgtcggaggtggtgatggtggtgtactaagagaaatagccaagcatgattc 273 ||||||||| |||| ||||| ||||| ||||| | |||||||| | |||||||||||| Sbjct: 821658 gttttggttatcggtggtggcgatggcggtgtcttgagagaaattgtcaagcatgattc 821716
>ref|NM_105699.2| Arabidopsis thaliana SPDS2 (SPERMIDINE SYNTHASE 2) AT1G70310 (SPDS2) mRNA, complete cds Length = 1275 Score = 44.1 bits (22), Expect = 0.45 Identities = 31/34 (91%) Strand = Plus / Plus Query: 438 ttattgttgattcatcagatccaattgggccagc 471 |||||||||||||||| |||||||| || ||||| Sbjct: 666 ttattgttgattcatctgatccaatcggtccagc 699
>gb|BT020360.1| Arabidopsis thaliana At1g70310 gene, complete cds Length = 1023 Score = 44.1 bits (22), Expect = 0.45 Identities = 31/34 (91%) Strand = Plus / Plus Query: 438 ttattgttgattcatcagatccaattgggccagc 471 |||||||||||||||| |||||||| || ||||| Sbjct: 605 ttattgttgattcatctgatccaatcggtccagc 638
>emb|AJ251297.1|ATH251297 Arabidopsis thaliana mRNA for spermidine synthase 2 (spdSyn2 gene) Length = 1225 Score = 44.1 bits (22), Expect = 0.45 Identities = 31/34 (91%) Strand = Plus / Plus Query: 438 ttattgttgattcatcagatccaattgggccagc 471 |||||||||||||||| |||||||| || ||||| Sbjct: 637 ttattgttgattcatctgatccaatcggtccagc 670
>gb|AF375409.1| Arabidopsis thaliana At1g70310/F17O7_16 mRNA, complete cds Length = 1267 Score = 44.1 bits (22), Expect = 0.45 Identities = 31/34 (91%) Strand = Plus / Plus Query: 438 ttattgttgattcatcagatccaattgggccagc 471 |||||||||||||||| |||||||| || ||||| Sbjct: 665 ttattgttgattcatctgatccaatcggtccagc 698
>gb|DQ295236.1| Trimastix pyriformis translation elongation factor 2 (EF-2) gene, partial cds Length = 2298 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 221 gttgtcggaggtggtgatggtg 242 |||||||||||||||||||||| Sbjct: 1047 gttgtcggaggtggtgatggtg 1026
>emb|BX816602.1|CNS0AD0G Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH58ZC12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1203 Score = 44.1 bits (22), Expect = 0.45 Identities = 31/34 (91%) Strand = Plus / Plus Query: 438 ttattgttgattcatcagatccaattgggccagc 471 |||||||||||||||| |||||||| || ||||| Sbjct: 652 ttattgttgattcatctgatccaatcggtccagc 685
>dbj|AB006693.1| Arabidopsis thaliana mRNA for spermidine synthase, partial cds Length = 1068 Score = 44.1 bits (22), Expect = 0.45 Identities = 31/34 (91%) Strand = Plus / Plus Query: 438 ttattgttgattcatcagatccaattgggccagc 471 |||||||||||||||| |||||||| || ||||| Sbjct: 466 ttattgttgattcatctgatccaatcggtccagc 499
>gb|AY705436.1| Silene vulgaris spermidine synthase gene, partial cds Length = 3533 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 440 attgttgattcatcagatccaattgg 465 |||||||||||||| ||||||||||| Sbjct: 2541 attgttgattcatctgatccaattgg 2566
>gb|AC003671.1|F17O7 Arabidopsis thaliana chromosome 1 BAC F17O7 complete sequence Length = 92128 Score = 44.1 bits (22), Expect = 0.45 Identities = 31/34 (91%) Strand = Plus / Plus Query: 438 ttattgttgattcatcagatccaattgggccagc 471 |||||||||||||||| |||||||| || ||||| Sbjct: 68527 ttattgttgattcatctgatccaatcggtccagc 68560
>ref|NM_124691.2| Arabidopsis thaliana SPDS3 (SPERMIDINE SYNTHASE 3) AT5G53120 (SPDS3) transcript variant AT5G53120.3 mRNA, complete cds Length = 1893 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 431 gatgccattattgttgattcatcagatcc 459 |||||||| ||||||||||| |||||||| Sbjct: 873 gatgccatcattgttgattcttcagatcc 901 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 206 cctaaaaatgttttggttgtcggaggtggtgatggtggtgt 246 |||||||||||| | ||||| || || |||||||||||||| Sbjct: 648 cctaaaaatgttcttgttgttggtggaggtgatggtggtgt 688 Score = 40.1 bits (20), Expect = 7.0 Identities = 47/56 (83%) Strand = Plus / Plus Query: 113 cttgtgcttgatggaattgttcagctgactgacaaggatgaatgtgcataccagga 168 ||||| || ||||| || || |||||||| || || |||||||||||||| ||||| Sbjct: 555 cttgttctagatggtatcgtacagctgaccgaaaaagatgaatgtgcatatcagga 610
>ref|NM_180848.1| Arabidopsis thaliana SPDS3 (SPERMIDINE SYNTHASE 3) AT5G53120 (SPDS3) transcript variant AT5G53120.2 mRNA, complete cds Length = 1919 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 431 gatgccattattgttgattcatcagatcc 459 |||||||| ||||||||||| |||||||| Sbjct: 899 gatgccatcattgttgattcttcagatcc 927 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 206 cctaaaaatgttttggttgtcggaggtggtgatggtggtgt 246 |||||||||||| | ||||| || || |||||||||||||| Sbjct: 674 cctaaaaatgttcttgttgttggtggaggtgatggtggtgt 714 Score = 40.1 bits (20), Expect = 7.0 Identities = 47/56 (83%) Strand = Plus / Plus Query: 113 cttgtgcttgatggaattgttcagctgactgacaaggatgaatgtgcataccagga 168 ||||| || ||||| || || |||||||| || || |||||||||||||| ||||| Sbjct: 581 cttgttctagatggtatcgtacagctgaccgaaaaagatgaatgtgcatatcagga 636
>ref|NM_180847.1| Arabidopsis thaliana SPDS3 (SPERMIDINE SYNTHASE 3) AT5G53120 (SPDS3) transcript variant AT5G53120.1 mRNA, complete cds Length = 1949 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 431 gatgccattattgttgattcatcagatcc 459 |||||||| ||||||||||| |||||||| Sbjct: 929 gatgccatcattgttgattcttcagatcc 957 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 206 cctaaaaatgttttggttgtcggaggtggtgatggtggtgt 246 |||||||||||| | ||||| || || |||||||||||||| Sbjct: 704 cctaaaaatgttcttgttgttggtggaggtgatggtggtgt 744 Score = 40.1 bits (20), Expect = 7.0 Identities = 47/56 (83%) Strand = Plus / Plus Query: 113 cttgtgcttgatggaattgttcagctgactgacaaggatgaatgtgcataccagga 168 ||||| || ||||| || || |||||||| || || |||||||||||||| ||||| Sbjct: 611 cttgttctagatggtatcgtacagctgaccgaaaaagatgaatgtgcatatcagga 666
>gb|AC163452.12| Mus musculus chromosome 19, clone RP23-405C7, complete sequence Length = 185406 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 316 tgatgtttgtaaagattttttccca 340 ||||||| ||||||||||||||||| Sbjct: 10722 tgatgttagtaaagattttttccca 10746
>gb|AE014840.1| Plasmodium falciparum 3D7 chromosome 11 section 5 of 8 of the complete sequence Length = 249995 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 212 aatgttttggttgtcggaggtggtgatggtggt 244 |||||||| ||||| || ||||||||||||||| Sbjct: 111058 aatgttttagttgtaggtggtggtgatggtggt 111090
>gb|BT015527.1| Arabidopsis thaliana At5g53120 mRNA sequence Length = 1077 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 431 gatgccattattgttgattcatcagatcc 459 |||||||| ||||||||||| |||||||| Sbjct: 652 gatgccatcattgttgattcttcagatcc 680 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 206 cctaaaaatgttttggttgtcggaggtggtgatggtggtgt 246 |||||||||||| | ||||| || || |||||||||||||| Sbjct: 427 cctaaaaatgttcttgttgttggtggaggtgatggtggtgt 467 Score = 40.1 bits (20), Expect = 7.0 Identities = 47/56 (83%) Strand = Plus / Plus Query: 113 cttgtgcttgatggaattgttcagctgactgacaaggatgaatgtgcataccagga 168 ||||| || ||||| || || |||||||| || || |||||||||||||| ||||| Sbjct: 334 cttgttctagatggtatcgtacagctgaccgaaaaagatgaatgtgcatatcagga 389
>gb|AC090871.11| Oryza sativa chromosome 3 BAC OSJNBb0060J21 genomic sequence, complete sequence Length = 162497 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 230 ggtggtgatggtggtgtacta 250 ||||||||||||||||||||| Sbjct: 37306 ggtggtgatggtggtgtacta 37326
>ref|XM_709747.1| Candida albicans SC5314 spermidine synthase (CaO19.2250), mRNA Length = 894 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 230 ggtggtgatggtggtgtactaagagaaat 258 ||||||||||||||||| |||||||||| Sbjct: 289 ggtggtgatggtggtgttttaagagaaat 317
>ref|XM_709685.1| Candida albicans SC5314 hypothetical protein (CaO19.9790), mRNA Length = 894 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 230 ggtggtgatggtggtgtactaagagaaat 258 ||||||||||||||||| |||||||||| Sbjct: 289 ggtggtgatggtggtgttttaagagaaat 317
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 230 ggtggtgatggtggtgtacta 250 ||||||||||||||||||||| Sbjct: 32706601 ggtggtgatggtggtgtacta 32706581
>ref|XM_445476.1| Candida glabrata CBS138, CAGL0D01408g partial mRNA Length = 882 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 230 ggtggtgatggtggtgtactaagagaaatagccaagcatga 270 ||||||||||||||||| || |||||| | | ||||||||| Sbjct: 286 ggtggtgatggtggtgttcttagagaagttgtcaagcatga 326
>gb|AC123846.5| Mus musculus BAC clone RP23-435B22 from chromosome 2, complete sequence Length = 221128 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 408 gaaattctccagaaggaaaat 428 ||||||||||||||||||||| Sbjct: 20212 gaaattctccagaaggaaaat 20232
>gb|BT000742.1| Arabidopsis thaliana putative spermidine synthase (At5g53120) mRNA, complete cds Length = 1447 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 431 gatgccattattgttgattcatcagatcc 459 |||||||| ||||||||||| |||||||| Sbjct: 884 gatgccatcattgttgattcttcagatcc 912 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 206 cctaaaaatgttttggttgtcggaggtggtgatggtggtgt 246 |||||||||||| | ||||| || || |||||||||||||| Sbjct: 659 cctaaaaatgttcttgttgttggtggaggtgatggtggtgt 699 Score = 40.1 bits (20), Expect = 7.0 Identities = 47/56 (83%) Strand = Plus / Plus Query: 113 cttgtgcttgatggaattgttcagctgactgacaaggatgaatgtgcataccagga 168 ||||| || ||||| || || |||||||| || || |||||||||||||| ||||| Sbjct: 566 cttgttctagatggtatcgtacagctgaccgaaaaagatgaatgtgcatatcagga 621
>ref|XM_644424.1| Entamoeba histolytica HM-1:IMSS Niemann-Pick C1 protein, putative (293.t00005) partial mRNA Length = 4020 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 345 tatatgttggatataaagacc 365 ||||||||||||||||||||| Sbjct: 577 tatatgttggatataaagacc 557
>ref|XM_720267.1| Plasmodium yoelii yoelii str. 17XNL spermidine synthase (PY04977) partial mRNA Length = 717 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 140 actgacaaggatgaatgtgcataccaggaaatg 172 ||||| || ||||||||||||||||| |||||| Sbjct: 283 actgaaaaagatgaatgtgcataccatgaaatg 315
>ref|XM_671848.1| Plasmodium berghei strain ANKA spermidine synthase (PB000058.03.0) partial mRNA Length = 966 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 140 actgacaaggatgaatgtgcataccaggaaatg 172 ||||| || ||||||||||||||||| |||||| Sbjct: 283 actgaaaaagatgaatgtgcataccatgaaatg 315
>emb|AJ271622.1|PFA271622 Plasmodium falciparum mRNA for spermidine synthase (spds gene) Length = 966 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 212 aatgttttggttgtcggaggtggtgatggtggt 244 |||||||| ||||| || ||||||||||||||| Sbjct: 355 aatgttttagttgtaggtggtggtgatggtggt 387
>gb|AY152836.1| Felis catus clone BAC 160a17 major histocompatiblity complex classical class II region, partial sequence Length = 130898 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 ggaggtggtgatggtggtgta 247 ||||||||||||||||||||| Sbjct: 88488 ggaggtggtgatggtggtgta 88508
>gb|AY079367.1| Arabidopsis thaliana putative spermidine synthase (At5g53120) mRNA, complete cds Length = 1111 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 431 gatgccattattgttgattcatcagatcc 459 |||||||| ||||||||||| |||||||| Sbjct: 655 gatgccatcattgttgattcttcagatcc 683 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 206 cctaaaaatgttttggttgtcggaggtggtgatggtggtgt 246 |||||||||||| | ||||| || || |||||||||||||| Sbjct: 430 cctaaaaatgttcttgttgttggtggaggtgatggtggtgt 470 Score = 40.1 bits (20), Expect = 7.0 Identities = 47/56 (83%) Strand = Plus / Plus Query: 113 cttgtgcttgatggaattgttcagctgactgacaaggatgaatgtgcataccagga 168 ||||| || ||||| || || |||||||| || || |||||||||||||| ||||| Sbjct: 337 cttgttctagatggtatcgtacagctgaccgaaaaagatgaatgtgcatatcagga 392
>gb|AY040013.1| Arabidopsis thaliana putative spermidine synthase (At5g53120) mRNA, complete cds Length = 1464 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 431 gatgccattattgttgattcatcagatcc 459 |||||||| ||||||||||| |||||||| Sbjct: 899 gatgccatcattgttgattcttcagatcc 927 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 206 cctaaaaatgttttggttgtcggaggtggtgatggtggtgt 246 |||||||||||| | ||||| || || |||||||||||||| Sbjct: 674 cctaaaaatgttcttgttgttggtggaggtgatggtggtgt 714 Score = 40.1 bits (20), Expect = 7.0 Identities = 47/56 (83%) Strand = Plus / Plus Query: 113 cttgtgcttgatggaattgttcagctgactgacaaggatgaatgtgcataccagga 168 ||||| || ||||| || || |||||||| || || |||||||||||||| ||||| Sbjct: 581 cttgttctagatggtatcgtacagctgaccgaaaaagatgaatgtgcatatcagga 636
>emb|CR380950.1| Candida glabrata strain CBS138 chromosome D complete sequence Length = 651701 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 230 ggtggtgatggtggtgtactaagagaaatagccaagcatga 270 ||||||||||||||||| || |||||| | | ||||||||| Sbjct: 158068 ggtggtgatggtggtgttcttagagaagttgtcaagcatga 158108
>gb|AF424571.1|AF424571 Arabidopsis thaliana AT5g53120/MFH8_5 mRNA, complete cds Length = 1472 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 206 cctaaaaatgttttggttgtcggaggtggtgatggtggtgt 246 |||||||||||| | ||||| || || |||||||||||||| Sbjct: 704 cctaaaaatgttcttgttgttggtggaggtgatggtggtgt 744 Score = 40.1 bits (20), Expect = 7.0 Identities = 47/56 (83%) Strand = Plus / Plus Query: 113 cttgtgcttgatggaattgttcagctgactgacaaggatgaatgtgcataccagga 168 ||||| || ||||| || || |||||||| || || |||||||||||||| ||||| Sbjct: 611 cttgttctagatggtatcgtacagctgaccgaaaaagatgaatgtgcatatcagga 666
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 230 ggtggtgatggtggtgtacta 250 ||||||||||||||||||||| Sbjct: 32797111 ggtggtgatggtggtgtacta 32797091
>emb|BX831219.1|CNS09ZFS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS69ZD12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1437 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 431 gatgccattattgttgattcatcagatcc 459 |||||||| ||||||||||| |||||||| Sbjct: 887 gatgccatcattgttgattcttcagatcc 915 Score = 40.1 bits (20), Expect = 7.0 Identities = 47/56 (83%) Strand = Plus / Plus Query: 113 cttgtgcttgatggaattgttcagctgactgacaaggatgaatgtgcataccagga 168 ||||| || ||||| || || |||||||| || || |||||||||||||| ||||| Sbjct: 569 cttgttctagatggtatcgtacagctgaccgaaaaagatgaatgtgcatatcagga 624
>gb|AY087226.1| Arabidopsis thaliana clone 33021 mRNA, complete sequence Length = 1339 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 431 gatgccattattgttgattcatcagatcc 459 |||||||| ||||||||||| |||||||| Sbjct: 794 gatgccatcattgttgattcttcagatcc 822 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 206 cctaaaaatgttttggttgtcggaggtggtgatggtggtgt 246 |||||||||||| | ||||| || || |||||||||||||| Sbjct: 569 cctaaaaatgttcttgttgttggtggaggtgatggtggtgt 609 Score = 40.1 bits (20), Expect = 7.0 Identities = 47/56 (83%) Strand = Plus / Plus Query: 113 cttgtgcttgatggaattgttcagctgactgacaaggatgaatgtgcataccagga 168 ||||| || ||||| || || |||||||| || || |||||||||||||| ||||| Sbjct: 476 cttgttctagatggtatcgtacagctgaccgaaaaagatgaatgtgcatatcagga 531
>emb|AL928537.12| Mouse DNA sequence from clone RP23-236E7 on chromosome 2, complete sequence Length = 190808 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 408 gaaattctccagaaggaaaat 428 ||||||||||||||||||||| Sbjct: 76923 gaaattctccagaaggaaaat 76943
>dbj|AB025622.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MFH8 Length = 62420 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 431 gatgccattattgttgattcatcagatcc 459 |||||||| ||||||||||| |||||||| Sbjct: 13548 gatgccatcattgttgattcttcagatcc 13576 Score = 40.1 bits (20), Expect = 7.0 Identities = 47/56 (83%) Strand = Plus / Plus Query: 113 cttgtgcttgatggaattgttcagctgactgacaaggatgaatgtgcataccagga 168 ||||| || ||||| || || |||||||| || || |||||||||||||| ||||| Sbjct: 12739 cttgttctagatggtatcgtacagctgaccgaaaaagatgaatgtgcatatcagga 12794
>ref|NM_202171.1| Arabidopsis thaliana SPDS1 (SPERMIDINE SYNTHASE 1) AT1G23820 (SPDS1) transcript variant AT1G23820.2 mRNA, complete cds Length = 1347 Score = 40.1 bits (20), Expect = 7.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 427 atacgatgccattattgttgattcatcagatccaat 462 ||||||||| |||||||||| || ||||||||||| Sbjct: 705 atacgatgcagttattgttgactcttcagatccaat 740
>ref|NM_102230.3| Arabidopsis thaliana SPDS1 (SPERMIDINE SYNTHASE 1) AT1G23820 (SPDS1) transcript variant AT1G23820.1 mRNA, complete cds Length = 1359 Score = 40.1 bits (20), Expect = 7.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 427 atacgatgccattattgttgattcatcagatccaat 462 ||||||||| |||||||||| || ||||||||||| Sbjct: 705 atacgatgcagttattgttgactcttcagatccaat 740
>gb|AC166902.2| Mus musculus BAC clone RP24-425L9 from chromosome 9, complete sequence Length = 184017 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 gatggaattgttcagctgac 141 |||||||||||||||||||| Sbjct: 168460 gatggaattgttcagctgac 168441
>gb|AC165245.2| Mus musculus BAC clone RP24-376N22 from chromosome 9, complete sequence Length = 217074 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 gatggaattgttcagctgac 141 |||||||||||||||||||| Sbjct: 1684 gatggaattgttcagctgac 1665
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 223 tgtcggaggtggtgatggtggtgt 246 |||||||||||||||||| ||||| Sbjct: 3529599 tgtcggaggtggtgatggcggtgt 3529576
>ref|XM_959586.1| Neurospora crassa OR74A hypothetical protein (NCU09244.1) partial mRNA Length = 3885 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 ggttgtcggaggtggtgatg 239 |||||||||||||||||||| Sbjct: 80 ggttgtcggaggtggtgatg 99
>ref|XM_331635.1| Neurospora crassa OR74A hypothetical protein (NCU09244.1) partial mRNA Length = 3885 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 ggttgtcggaggtggtgatg 239 |||||||||||||||||||| Sbjct: 80 ggttgtcggaggtggtgatg 99
>gb|AY442259.1| Populus alba x Populus tremula clone cET-1-pop1-506 predicted protein mRNA, complete cds Length = 2450 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 cggaggtggtgatggtggtg 245 |||||||||||||||||||| Sbjct: 439 cggaggtggtgatggtggtg 420
>ref|XM_387541.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG07365.1) partial mRNA Length = 645 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 cggaggtggtgatggtggtg 245 |||||||||||||||||||| Sbjct: 579 cggaggtggtgatggtggtg 598
>gb|AC004131.1|HUAC004131 Homo sapiens Chromosome 16 BAC clone CIT987SK-A-69G12, complete sequence Length = 77713 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 ccaggaaatggttactcacc 182 |||||||||||||||||||| Sbjct: 28216 ccaggaaatggttactcacc 28197
>gb|AC019063.4| Homo sapiens BAC clone RP11-144H20 from 7, complete sequence Length = 187282 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 149 gatgaatgtgcataccaggaaatggttactca 180 ||||||||||||||||| ||| ||||| |||| Sbjct: 9963 gatgaatgtgcataccatgaattggtttctca 9994
>gb|DQ127553.1| Emiliania huxleyi virus 163 clone new39.seq partial sequence Length = 7701 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 cggaggtggtgatggtggtg 245 |||||||||||||||||||| Sbjct: 6082 cggaggtggtgatggtggtg 6063
>gb|AC144766.18| Medicago truncatula clone mth2-17c2, complete sequence Length = 92099 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 ggaggtggtgatggtggtgt 246 |||||||||||||||||||| Sbjct: 65879 ggaggtggtgatggtggtgt 65860
>emb|AL513164.13| Human DNA sequence from clone RP11-400P17 on chromosome 6 Contains the 5' part of a novel gene, the 5' part of the gene for KIAA0790 protein (KIAA0790) and a CpG island, complete sequence Length = 154288 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 315 ttgatgtttgtaaagatttt 334 |||||||||||||||||||| Sbjct: 40945 ttgatgtttgtaaagatttt 40926
>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome Length = 5373180 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 205 tcctaaaaatgttttggttgtcgg 228 ||||||||||||||||||| |||| Sbjct: 715374 tcctaaaaatgttttggttatcgg 715397
>emb|BX842627.1| Neurospora crassa DNA linkage group I BAC clone B8J22 Length = 75335 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 ggttgtcggaggtggtgatg 239 |||||||||||||||||||| Sbjct: 50937 ggttgtcggaggtggtgatg 50918
>emb|AJ252215.1|ATH252215 Arabidopsis thaliana spdsyn1 gene for spermidine synthase, exons 1-9 Length = 2883 Score = 40.1 bits (20), Expect = 7.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 427 atacgatgccattattgttgattcatcagatccaat 462 ||||||||| |||||||||| || ||||||||||| Sbjct: 1806 atacgatgcagttattgttgactcttcagatccaat 1841
>emb|AJ251296.1|ATH251296 Arabidopsis thaliana mRNA for spermidine synthase 1 (spdSyn1 gene) Length = 1218 Score = 40.1 bits (20), Expect = 7.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 427 atacgatgccattattgttgattcatcagatccaat 462 ||||||||| |||||||||| || ||||||||||| Sbjct: 639 atacgatgcagttattgttgactcttcagatccaat 674
>emb|AL603710.8| Mouse DNA sequence from clone RP23-247B13 on chromosome 11 Contains the 3' end of the Nt5m gene for 5'-3'-nucleotidase (mitochondrial), four novel genes, the Rasd1 gene for RAS dexamethasone-induced 1, the 3' end of the Pemt gene for phosphatidylethanolamine N-methyltransferase and two CpG islands, complete sequence Length = 179124 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 gatgtttgtaaagatttttt 336 |||||||||||||||||||| Sbjct: 4819 gatgtttgtaaagatttttt 4800
>dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111 Length = 2356219 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 cggaggtggtgatggtggtg 245 |||||||||||||||||||| Sbjct: 271456 cggaggtggtgatggtggtg 271437
>gb|AY093360.1| Arabidopsis thaliana strong similarity to spermidine synthase (At1g23820) mRNA, complete cds Length = 1125 Score = 40.1 bits (20), Expect = 7.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 427 atacgatgccattattgttgattcatcagatccaat 462 ||||||||| |||||||||| || ||||||||||| Sbjct: 582 atacgatgcagttattgttgactcttcagatccaat 617
>gb|AC034176.8| Homo sapiens BAC clone RP11-755F5 from 4, complete sequence Length = 193100 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 ggaggtggtgatggtggtgt 246 |||||||||||||||||||| Sbjct: 66719 ggaggtggtgatggtggtgt 66738
>gb|AY062593.1| Arabidopsis thaliana Strong similarity to spermidine synthase (At1g23820; F5O8.38) mRNA, complete cds Length = 1258 Score = 40.1 bits (20), Expect = 7.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 427 atacgatgccattattgttgattcatcagatccaat 462 ||||||||| |||||||||| || ||||||||||| Sbjct: 650 atacgatgcagttattgttgactcttcagatccaat 685
>gb|DQ074728.1| Fragaria x ananassa spermidine synthase mRNA, partial cds Length = 378 Score = 40.1 bits (20), Expect = 7.0 Identities = 35/40 (87%) Strand = Plus / Plus Query: 284 atagacatatgtgagattgatcagctagttattgatgttt 323 ||||| ||||||||||||||| || | ||| ||||||||| Sbjct: 10 atagatatatgtgagattgataagatggttgttgatgttt 49
>emb|BX572079.7| Zebrafish DNA sequence from clone DKEY-35L8 in linkage group 15, complete sequence Length = 192849 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 138 tgactgacaaggatgaatgtgcatacca 165 ||||||| | |||||||||||||||||| Sbjct: 17280 tgactgatatggatgaatgtgcatacca 17253
>emb|BX814923.1|CNS0ABBK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS19ZC12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1259 Score = 40.1 bits (20), Expect = 7.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 427 atacgatgccattattgttgattcatcagatccaat 462 ||||||||| |||||||||| || ||||||||||| Sbjct: 638 atacgatgcagttattgttgactcttcagatccaat 673
>gb|AC068808.20|AC068808 Mus musculus 11 BAC RP23-479J7 (Roswell Park Cancer Institute Mouse BAC Library) complete sequence Length = 171146 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 gatgtttgtaaagatttttt 336 |||||||||||||||||||| Sbjct: 107508 gatgtttgtaaagatttttt 107527
>gb|AC027130.5|AC027130 Homo sapiens chromosome 16 clone CTD-2380F24, complete sequence Length = 134640 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 ccaggaaatggttactcacc 182 |||||||||||||||||||| Sbjct: 116501 ccaggaaatggttactcacc 116482
>gb|AC134300.3| Homo sapiens chromosome 16 clone CTC-496I23, complete sequence Length = 171048 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 ccaggaaatggttactcacc 182 |||||||||||||||||||| Sbjct: 85090 ccaggaaatggttactcacc 85109
>gb|AC074264.3| Homo sapiens BAC clone RP11-410L9 from 2, complete sequence Length = 122472 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gccagcccaggaacttgtgg 485 |||||||||||||||||||| Sbjct: 25603 gccagcccaggaacttgtgg 25584
>gb|AC156446.2| Volvox carteri clone JGIAOBO-29H23, complete sequence Length = 31927 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 cggaggtggtgatggtggtg 245 |||||||||||||||||||| Sbjct: 24943 cggaggtggtgatggtggtg 24962
>emb|AL163032.3|CNS01RI9 Human chromosome 14 DNA sequence BAC C-2303B20 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 130313 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 aaatagccaagcatgattca 274 |||||||||||||||||||| Sbjct: 10662 aaatagccaagcatgattca 10643
>gb|AC005990.1|F5O8 Arabidopsis thaliana chromosome 1 BAC F5O8 sequence, complete sequence Length = 99923 Score = 40.1 bits (20), Expect = 7.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 427 atacgatgccattattgttgattcatcagatccaat 462 ||||||||| |||||||||| || ||||||||||| Sbjct: 96226 atacgatgcagttattgttgactcttcagatccaat 96261
>emb|AJ890364.1| Emiliania huxleyi virus 86 isolate EhV86 Length = 407339 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 cggaggtggtgatggtggtg 245 |||||||||||||||||||| Sbjct: 56830 cggaggtggtgatggtggtg 56849
>gb|U00089.2| Mycoplasma pneumoniae M129, complete genome Length = 816394 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 ttgtgcttgatggaattgtt 133 |||||||||||||||||||| Sbjct: 576796 ttgtgcttgatggaattgtt 576815
>emb|AL356805.5|CNS05TDN Human chromosome 14 DNA sequence BAC R-33N16 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 158838 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 aaatagccaagcatgattca 274 |||||||||||||||||||| Sbjct: 122856 aaatagccaagcatgattca 122837 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,277,123 Number of Sequences: 3902068 Number of extensions: 5277123 Number of successful extensions: 138642 Number of sequences better than 10.0: 108 Number of HSP's better than 10.0 without gapping: 108 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 138191 Number of HSP's gapped (non-prelim): 448 length of query: 520 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 497 effective length of database: 17,143,297,704 effective search space: 8520218958888 effective search space used: 8520218958888 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
