ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags4l20 |
|---|---|
| Clone Library Name | barley_pub |
>MAPT_ARATH (Q9T041) Microtubule-associated protein TORTIFOLIA1| (Microtubule-associated protein SPIRAL2) (Protein CONVOLUTA) Length = 864 Score = 62.8 bits (151), Expect = 6e-10 Identities = 34/90 (37%), Positives = 60/90 (66%) Frame = +3 Query: 69 ECGGNLEEISEVEGGSERAQSGLKDEGLSEIRTQLLQIEKQQSGLLDLLQKFMGKSENGM 248 E G+ +S + SE + + + S I+ QLLQ+E+QQ+ L+++LQ+F+G S + M Sbjct: 481 ETPGHHAPVSNTDNQSEGSFTSNRGNW-SAIQRQLLQLERQQTNLMNMLQEFIGGSHDSM 539 Query: 249 NSLETRVHGLEMALDEISRDLAVSSERMSS 338 +LE RV GLE +++++RDL++SS R ++ Sbjct: 540 VTLEGRVRGLERIVEDMARDLSISSGRRAN 569
>LIPA2_MOUSE (Q8BSS9) Liprin-alpha-2 (Protein tyrosine phosphatase receptor type| f polypeptide-interacting protein alpha-2) (PTPRF-interacting protein alpha-2) Length = 1257 Score = 35.0 bits (79), Expect = 0.14 Identities = 32/137 (23%), Positives = 56/137 (40%) Frame = +3 Query: 141 DEGLSEIRTQLLQIEKQQSGLLDLLQKFMGKSENGMNSLETRVHGLEMALDEISRDLAVS 320 D L+E +L K++ L+ + +SEN +LE +H D++S + Sbjct: 470 DRLLTESNERLQLHLKERMAALEEKNVLIQESENFRKNLEESLH------DKVSLAEEIE 523 Query: 321 SERMSSSEPRVNTCCILSPKFWRRHDGVRNSSRFSASSVPNSSEGSRTSYKWERQKFGVQ 500 R + ++ T ++ P R H R+S S+ +S RT+ R + G Sbjct: 524 KLRSELDQMKMRTGSLIEPTISRTHIDTSTELRYSVGSLVDSQSDYRTTKVIRRPRRGRM 583 Query: 501 GGFVTNPLAEPNISSVG 551 G EP + S+G Sbjct: 584 G----VRRDEPKVKSLG 596
>STP2_MOUSE (P11378) Nuclear transition protein 2 (TP-2) (TP2)| Length = 117 Score = 33.9 bits (76), Expect = 0.32 Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 3/62 (4%) Frame = -3 Query: 402 HHHAFSRI---LGSECNRCSHGVHCLTSFLKKLLGHVISHPMPSLGHGPLSPKSSCHSQI 232 H H+ SR ++CN+C+ HC + GH S PS G PK S HS+ Sbjct: 14 HPHSSSRPQSHTSNQCNQCTCSHHCRSC---SQAGHAGSSSSPSPGPPMKHPKPSVHSRH 70 Query: 231 SP 226 SP Sbjct: 71 SP 72
>DNAB_SYNY3 (Q55418) Replicative DNA helicase (EC 3.6.1.-) [Contains: Ssp dnaB| intein] Length = 872 Score = 32.7 bits (73), Expect = 0.72 Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 6/114 (5%) Frame = +3 Query: 150 LSEIRTQLLQIEKQQSG-----LLDLLQKFMGKSENGMNSLETRVHGLEMALDEISRDLA 314 ++++R+Q+ +++ +Q G L+D LQ G S+N + L L+ EI+ + Sbjct: 295 VTQMRSQVRRLQSEQKGPLGMVLIDYLQLMEGGSDNRVQELSKITRSLKGLAREINAPVI 354 Query: 315 VSSERMSSSEPRVNTCCILSPKFWRRHDGVRNSSRFSASS-VPNSSEGSRTSYK 473 S+ + E R N ++S +R S S S + +S G R S K Sbjct: 355 ALSQLSRAVESRTNKRPMMS--------DLRESGCISGDSLISLASTGKRVSIK 400
>STP2_RAT (P11101) Nuclear transition protein 2 (TP-2) (TP2)| Length = 114 Score = 32.3 bits (72), Expect = 0.94 Identities = 20/59 (33%), Positives = 26/59 (44%) Frame = -3 Query: 402 HHHAFSRILGSECNRCSHGVHCLTSFLKKLLGHVISHPMPSLGHGPLSPKSSCHSQISP 226 H H+ SR N+C+ HC + GH S PS G PK+ HS+ SP Sbjct: 14 HPHSSSRPQSHTNNQCACSHHCRSC---SQAGHPSSSSSPSPGPPTKHPKTPMHSRYSP 69
>SFR17_HUMAN (Q8TF01) Splicing factor, arginine/serine-rich 130| (Serine-arginine-rich splicing regulatory protein 130) (SRrp130) (SR-rich protein) (SR-related protein) Length = 805 Score = 32.0 bits (71), Expect = 1.2 Identities = 29/117 (24%), Positives = 50/117 (42%) Frame = +3 Query: 117 ERAQSGLKDEGLSEIRTQLLQIEKQQSGLLDLLQKFMGKSENGMNSLETRVHGLEMALDE 296 E+ Q L D+ + E + Q ++ K+ + +F+ K +N ++ LE R E Sbjct: 430 EKEQQLLHDKQMEEEKQQTERVTKE-------MNEFIHKEQNSLSLLEAR---------E 473 Query: 297 ISRDLAVSSERMSSSEPRVNTCCILSPKFWRRHDGVRNSSRFSASSVPNSSEGSRTS 467 D+ +R + T +L PK + + SR +SS + S SRTS Sbjct: 474 ADGDVVNEKKRTPNE-----TTSVLEPKKEHKEKEKQGRSRSGSSSSGSPSSNSRTS 525
>GOGB1_HUMAN (Q14789) Golgin subfamily B member 1 (Giantin) (Macrogolgin) (372 kDa| Golgi complex-associated protein) (GCP372) Length = 3259 Score = 32.0 bits (71), Expect = 1.2 Identities = 18/75 (24%), Positives = 37/75 (49%) Frame = +3 Query: 117 ERAQSGLKDEGLSEIRTQLLQIEKQQSGLLDLLQKFMGKSENGMNSLETRVHGLEMALDE 296 E+ Q K+ G +L ++ K++ + LQK + + +++LE V LE E Sbjct: 1992 EKIQGAQKEPGNKSHAKELQELLKEKQQEVKQLQKDCIRYQEKISALERTVKALEFVQTE 2051 Query: 297 ISRDLAVSSERMSSS 341 +DL ++ E ++ + Sbjct: 2052 SQKDLEITKENLAQA 2066
>OPTN_HUMAN (Q96CV9) Optineurin (Optic neuropathy-inducing protein)| (E3-14.7K-interacting protein) (FIP-2) (Huntingtin-interacting protein HYPL) (NEMO-related protein) (Transcription factor IIIA-interacting protein) (TFIIIA-IntP) Length = 577 Score = 32.0 bits (71), Expect = 1.2 Identities = 32/139 (23%), Positives = 65/139 (46%), Gaps = 11/139 (7%) Frame = +3 Query: 27 RXNEAKAGSRVVPYECGGNLEEISEVEGGSERAQSGLKDEG----------LSEIRTQLL 176 + EAK + +E EE+ +++G SER+ D+ ++RTQ++ Sbjct: 89 QSKEAKERLMALSHENEKLKEELGKLKGKSERSSEDPTDDSRLPRAEAEQEKDQLRTQVV 148 Query: 177 QIEKQQSGLLDLLQKFMGKSENGMNSLETRVHGLEMALDEISRDLAVSSERMSSSEPR-V 353 +++ +++ LL ++ + K + +S ++ V E+ + E + +V + S R V Sbjct: 149 RLQAEKADLLGIVSELQLKLNSSGSSEDSFV---EIRMAEGEAEGSVKEIKHSPGPTRTV 205 Query: 354 NTCCILSPKFWRRHDGVRN 410 +T LS R DG +N Sbjct: 206 STGTALSKYRSRSADGAKN 224
>LIPA2_HUMAN (O75334) Liprin-alpha-2 (Protein tyrosine phosphatase receptor type| f polypeptide-interacting protein alpha-2) (PTPRF-interacting protein alpha-2) Length = 1257 Score = 32.0 bits (71), Expect = 1.2 Identities = 32/137 (23%), Positives = 55/137 (40%) Frame = +3 Query: 141 DEGLSEIRTQLLQIEKQQSGLLDLLQKFMGKSENGMNSLETRVHGLEMALDEISRDLAVS 320 D L+E +L K++ L+ + +SE +LE +H E +EI + Sbjct: 470 DRLLTESNERLQLHLKERMAALEEKNVLIQESETFRKNLEESLHDKESLAEEIEK----- 524 Query: 321 SERMSSSEPRVNTCCILSPKFWRRHDGVRNSSRFSASSVPNSSEGSRTSYKWERQKFGVQ 500 R + ++ T ++ P R H R+S S+ +S RT+ R + G Sbjct: 525 -LRSELDQLKMRTGSLIEPTIPRTHLDTSAELRYSVGSLVDSQSDYRTTKVIRRPRRGRM 583 Query: 501 GGFVTNPLAEPNISSVG 551 G EP + S+G Sbjct: 584 G----VRRDEPKVKSLG 596
>DDEF2_HUMAN (O43150) Development and differentiation-enhancing factor 2 (Pyk2| C-terminus-associated protein) (PAP) (Paxillin-associated protein with ARFGAP activity 3) (PAG3) Length = 1006 Score = 32.0 bits (71), Expect = 1.2 Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 10/100 (10%) Frame = +3 Query: 246 MNSLETRVHGLEMALDEISRDL---------AVSSERMSSSEPRVNTCCIL-SPKFWRRH 395 + +L T +H ++ A DE R L A+ E+ S+ R +T L P+ + H Sbjct: 245 IETLSTDLHTIKQAQDEERRQLIQLRDILKSALQVEQKEDSQIRQSTAYSLHQPQGNKEH 304 Query: 396 DGVRNSSRFSASSVPNSSEGSRTSYKWERQKFGVQGGFVT 515 RN S + S+G R W+++K V+ GF+T Sbjct: 305 GTERNGSLYK------KSDGIRKV--WQKRKCSVKNGFLT 336
>YLIC_ECOLI (P75798) Inner membrane ABC transporter permease protein yliC| Length = 306 Score = 30.8 bits (68), Expect = 2.7 Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 3/51 (5%) Frame = -2 Query: 436 TLEAENLEEFLTPSCLLQNFGLRMQQVFTRGSLLDILSEE---TARSRDIS 293 T+ A++ + ++ PS L + FTR S +D+LSE+ TAR++ +S Sbjct: 164 TVGADSWQHYILPSLTLGAAVAAVMARFTRASFVDVLSEDYMRTARAKGVS 214
>OPTN_PONPY (Q5R923) Optineurin| Length = 527 Score = 30.4 bits (67), Expect = 3.6 Identities = 31/139 (22%), Positives = 65/139 (46%), Gaps = 11/139 (7%) Frame = +3 Query: 27 RXNEAKAGSRVVPYECGGNLEEISEVEGGSERAQSGLKDEG----------LSEIRTQLL 176 + EAK + +E EE+ +++G SER+ D+ ++RTQ++ Sbjct: 89 QSKEAKERLMALSHENEKLKEELGKLKGKSERSSEDPTDDSRLPRAEAEQEKDQLRTQVV 148 Query: 177 QIEKQQSGLLDLLQKFMGKSENGMNSLETRVHGLEMALDEISRDLAVSSERMSSSEPR-V 353 +++ +++ LL ++ + K + +S ++ V E+ + E + +V + S R V Sbjct: 149 RLQAEKADLLGIVSELQLKLNSSGSSEDSFV---EIRMAEGEAEGSVKEIKHSPGPTRTV 205 Query: 354 NTCCILSPKFWRRHDGVRN 410 +T LS R +G +N Sbjct: 206 STSRALSKYRSRSAEGAKN 224
>RIF1_MOUSE (Q6PR54) Telomere-associated protein RIF1 (Rap1-interacting factor 1| homolog) (mRif1) Length = 2419 Score = 30.4 bits (67), Expect = 3.6 Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 8/100 (8%) Frame = +3 Query: 87 EEISEVEGGSERAQSGLKDEGLSEIRTQLLQIEKQQSGLLDL------LQKFMGKSENGM 248 E +SE++G S +D GLSE + + Q + ++G LD+ + G S G+ Sbjct: 1814 EAVSEIQGPCSENHSPAEDPGLSECK-DISQKQLSENGELDISDVGKACKVIAGSSPEGV 1872 Query: 249 NSLETRVH--GLEMALDEISRDLAVSSERMSSSEPRVNTC 362 ++E V A E S + VS + + + + + C Sbjct: 1873 ETMELNVRNDAFVAADSEKSTQMDVSVDVATEEDNKKDEC 1912
>TRX_DROVI (Q24742) Protein trithorax| Length = 3828 Score = 30.4 bits (67), Expect = 3.6 Identities = 18/47 (38%), Positives = 24/47 (51%) Frame = +3 Query: 411 SSRFSASSVPNSSEGSRTSYKWERQKFGVQGGFVTNPLAEPNISSVG 551 S RF+A P SS S T+ KW+ +NPLAE N++ G Sbjct: 864 SLRFTA---PTSSASSGTTIKWKSSAETAVNSIKSNPLAENNVTFGG 907
>HSLU_BACSK (Q5WFQ1) ATP-dependent hsl protease ATP-binding subunit hslU| Length = 463 Score = 30.4 bits (67), Expect = 3.6 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 7/61 (11%) Frame = +3 Query: 99 EVEGGSERAQSGLK-------DEGLSEIRTQLLQIEKQQSGLLDLLQKFMGKSENGMNSL 257 E +G E ++ LK +G E RT +++ +Q G +DL Q G + GMN Sbjct: 162 EEDGEEELTRANLKRKMAEKLKQGELEERTVTVEVTEQNHGFMDLFQGGAGMEQMGMNMQ 221 Query: 258 E 260 E Sbjct: 222 E 222
>AMOT_HUMAN (Q4VCS5) Angiomotin| Length = 1084 Score = 30.4 bits (67), Expect = 3.6 Identities = 14/40 (35%), Positives = 21/40 (52%) Frame = -3 Query: 132 LTEPSLNHLQPQKSLPSYHHIHTEQLANQPSLHXPGKAPS 13 L++P L+ Q Q+ +HH H +Q Q PG+A S Sbjct: 369 LSQPGLSQQQQQQQQQHHHHHHHQQQQQQQPQQQPGEAYS 408
>TPM2_SCHMA (P42638) Tropomyosin 2 (TMII)| Length = 284 Score = 30.0 bits (66), Expect = 4.6 Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 10/101 (9%) Frame = +3 Query: 84 LEEISEVEGGSERAQSGLKDEGLSEIRTQLLQIEKQQSGL---LDLLQKFMGKSENGMNS 254 L++I +V+ E AQ+ L +E T+L + +K+ + + LQK + + E+ + S Sbjct: 47 LKKIQQVDTDKETAQTQL-----AETNTKLEETDKRATEAEAEVASLQKRIRQLEDELES 101 Query: 255 LETRVHGLEMALDEIS-------RDLAVSSERMSSSEPRVN 356 ETR+ + L+E S R V R + E R+N Sbjct: 102 TETRLQEATVKLEEASKAADESDRGRKVLENRTFADEERIN 142
>SMC4_SCHPO (P41004) Structural maintenance of chromosome 4 (Chromosome| segregation protein cut3) (Cell untimely torn protein 3) Length = 1324 Score = 30.0 bits (66), Expect = 4.6 Identities = 14/51 (27%), Positives = 31/51 (60%) Frame = +3 Query: 153 SEIRTQLLQIEKQQSGLLDLLQKFMGKSENGMNSLETRVHGLEMALDEISR 305 SEI L++++++ L D+ + GK+E N++E + + AL++I++ Sbjct: 482 SEIADLSLRLQQEELSLDDIRKSLQGKTEGISNAIEEKQKAMAPALEKINQ 532
>PHK_RHOBA (Q7UH14) Probable phosphoketolase (EC 4.1.2.-)| Length = 793 Score = 30.0 bits (66), Expect = 4.6 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 3/60 (5%) Frame = +3 Query: 276 LEMALDEISRDLAVSSERMSSSEPRVNTCCILSPKFW---RRHDGVRNSSRFSASSVPNS 446 L++A+ +I + E +S PR + SPK W + DGVRN F + VP S Sbjct: 256 LDVAIGQIRSIQQNARETGDTSRPRWPMIVLRSPKGWTGPKFVDGVRNEGTFHSHQVPLS 315
>MSA2_PLAF6 (P50497) Merozoite surface antigen 2 precursor (MSA-2)| Length = 274 Score = 29.6 bits (65), Expect = 6.1 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = -1 Query: 110 TFNLRNLFQVTTTFIRNNSRTSLRFIXPEKRPPS 9 TFN++N + + TFI N S+R E +PP+ Sbjct: 17 TFNIKNESKYSNTFINNAYNMSIRRSMAESKPPT 50
>MDR49_DROME (Q00449) Multidrug resistance protein homolog 49 (EC 3.6.3.44)| (P-glycoprotein 49) Length = 1302 Score = 29.6 bits (65), Expect = 6.1 Identities = 12/35 (34%), Positives = 20/35 (57%) Frame = +1 Query: 106 KVVQRGLSQASKTRACQRSGHSCFRLRNSRVVCLI 210 KVVQ+ L +A R C H +RN+ ++C++ Sbjct: 1236 KVVQQALDEARSGRTCLTIAHRLTTVRNADLICVL 1270
>MSA2_PLAF2 (Q03646) Merozoite surface antigen 2 precursor (MSA-2)| Length = 347 Score = 29.6 bits (65), Expect = 6.1 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = -1 Query: 110 TFNLRNLFQVTTTFIRNNSRTSLRFIXPEKRPPS 9 TFN++N + + TFI N S+R E +PP+ Sbjct: 17 TFNIKNESKYSNTFINNAYNMSIRRSMAESKPPT 50
>MSA2_PLAFZ (Q03645) Merozoite surface antigen 2 precursor (MSA-2)| Length = 300 Score = 29.6 bits (65), Expect = 6.1 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = -1 Query: 110 TFNLRNLFQVTTTFIRNNSRTSLRFIXPEKRPPS 9 TFN++N + + TFI N S+R E +PP+ Sbjct: 17 TFNIKNESKYSNTFINNAYNMSIRRSMEESKPPT 50
>MSA2_PLAFI (Q03644) Merozoite surface antigen 2 precursor (MSA-2)| Length = 300 Score = 29.6 bits (65), Expect = 6.1 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = -1 Query: 110 TFNLRNLFQVTTTFIRNNSRTSLRFIXPEKRPPS 9 TFN++N + + TFI N S+R E +PP+ Sbjct: 17 TFNIKNESKYSNTFINNAYNMSIRRSMEESKPPT 50
>HSP88_NEUCR (O74225) Heat shock protein Hsp88| Length = 707 Score = 29.6 bits (65), Expect = 6.1 Identities = 16/50 (32%), Positives = 28/50 (56%) Frame = +3 Query: 180 IEKQQSGLLDLLQKFMGKSENGMNSLETRVHGLEMALDEISRDLAVSSER 329 IE++Q+ +++ K + +E N LET ++ L LD+ DLA E+ Sbjct: 555 IEREQAMIME--DKLVADTEEKKNELETYIYDLRNKLDDQYADLASEEEK 602
>MSA2_PLAF9 (Q03994) Merozoite surface antigen 2 precursor (MSA-2)| Length = 302 Score = 29.6 bits (65), Expect = 6.1 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = -1 Query: 110 TFNLRNLFQVTTTFIRNNSRTSLRFIXPEKRPPS 9 TFN++N + + TFI N S+R E +PP+ Sbjct: 17 TFNIKNESKYSNTFINNAYNMSIRRSMEESKPPT 50
>MSA2_PLAFC (Q99317) Merozoite surface antigen 2 precursor (MSA-2) (Allelic| form 1) Length = 262 Score = 29.6 bits (65), Expect = 6.1 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = -1 Query: 110 TFNLRNLFQVTTTFIRNNSRTSLRFIXPEKRPPS 9 TFN++N + + TFI N S+R E +PP+ Sbjct: 17 TFNIKNESKYSNTFINNAYNMSIRRSMAESKPPT 50
>GUX2_TRIRE (P07987) Exoglucanase 2 precursor (EC 3.2.1.91) (Exoglucanase II)| (Exocellobiohydrolase II) (CBHII) (1,4-beta-cellobiohydrolase) Length = 471 Score = 29.6 bits (65), Expect = 6.1 Identities = 25/69 (36%), Positives = 28/69 (40%), Gaps = 12/69 (17%) Frame = -2 Query: 205 SKPLCCFSI*SSCVLISDKPSSLRPD*ALSEP------------PSTSEISSKLPPHSYG 62 S P CC S S+CV +D S P A S P+TS SS PP Sbjct: 40 SGPTCCASG-STCVYSNDYYSQCLPGAASSSSSTRAASTTSRVSPTTSRSSSATPPPGST 98 Query: 61 TTREPAFAS 35 TTR P S Sbjct: 99 TTRVPPVGS 107
>CNN_DROME (P54623) Centrosomin (Protein arrow)| Length = 1320 Score = 29.6 bits (65), Expect = 6.1 Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 1/71 (1%) Frame = +3 Query: 216 QKFMGKSEN-GMNSLETRVHGLEMALDEISRDLAVSSERMSSSEPRVNTCCILSPKFWRR 392 Q+F +SE+ + + +V + LDE S LA + +S SE TC R Sbjct: 834 QQFDNQSESEAWSEPDRKVSLARIGLDETSNSLAAPEQAISESESEGRTCA-------TR 886 Query: 393 HDGVRNSSRFS 425 D RNS R + Sbjct: 887 QDRNRNSERIA 897
>MYSP_ANISI (Q9NJA9) Paramyosin (Allergen Ani s 2)| Length = 869 Score = 29.3 bits (64), Expect = 7.9 Identities = 27/111 (24%), Positives = 47/111 (42%), Gaps = 20/111 (18%) Frame = +3 Query: 81 NLEEIS-EVEGGSERAQSGLKDEGLSEIRTQLLQIEKQQSGLLDLLQKFMGKSENGMN-- 251 +L+E++ E+ ERA L D + Q L E++ S +D L+K + + + Sbjct: 667 DLDEVTKELHAADERANRALADAARA---VQELHEEQEHSMKIDALRKSLEEQVKQLQVQ 723 Query: 252 -----------------SLETRVHGLEMALDEISRDLAVSSERMSSSEPRV 353 LETR+ LE+ALDE +R + + + R+ Sbjct: 724 IQEAEAAALLGGKRVIAKLETRIRDLEVALDEETRRHKETQSALRKKDRRI 774
>RAD50_ARCFU (O29230) DNA double-strand break repair rad50 ATPase| Length = 886 Score = 29.3 bits (64), Expect = 7.9 Identities = 26/99 (26%), Positives = 45/99 (45%) Frame = +3 Query: 84 LEEISEVEGGSERAQSGLKDEGLSEIRTQLLQIEKQQSGLLDLLQKFMGKSENGMNSLET 263 +E ISE E + L +E + + ++L ++E+ +S L L ++ +S+ Sbjct: 196 IERISEEIKSIESLREKLSEE-VRNLESRLKELEEHKSRLESLRKQ--------ESSVLQ 246 Query: 264 RVHGLEMALDEISRDLAVSSERMSSSEPRVNTCCILSPK 380 V GLE L E+ + L ER+ E + L PK Sbjct: 247 EVRGLEEKLRELEKQLKEVVERIEDLEKKAKEVKELKPK 285
>SYNE1_HUMAN (Q8NF91) Nesprin-1 (Nuclear envelope spectrin repeat protein 1)| (Synaptic nuclear envelope protein 1) (Syne-1) (Myocyte nuclear envelope protein 1) (Myne-1) (Enaptin) Length = 8797 Score = 29.3 bits (64), Expect = 7.9 Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 11/97 (11%) Frame = +3 Query: 87 EEISEVEGGSERAQSGLK--DEGLSEI--RTQLLQIEKQQ-------SGLLDLLQKFMGK 233 + ++E ++A+ GLK D G+ E+ R LQ+E+ + D L +G Sbjct: 6517 QPVAEQIEAIQQAEDGLKEFDAGIIELKRRGDKLQVEQPSMQELSKLQDMYDELMMIIGS 6576 Query: 234 SENGMNSLETRVHGLEMALDEISRDLAVSSERMSSSE 344 +G+N T E AL +++ L E+M+ + Sbjct: 6577 RRSGLNQNLTLKSQYERALQDLADLLETGQEKMAGDQ 6613
>IES2_YEAST (P40154) Ino eighty subunit 2| Length = 320 Score = 29.3 bits (64), Expect = 7.9 Identities = 19/58 (32%), Positives = 34/58 (58%) Frame = +3 Query: 69 ECGGNLEEISEVEGGSERAQSGLKDEGLSEIRTQLLQIEKQQSGLLDLLQKFMGKSEN 242 E GG+ +++++ E RA++ K + LSE R + E++Q + LL+K GKS + Sbjct: 225 EDGGSKKKLTDEEIQLRRAENARKRKNLSEKRLE----EEKQDTINKLLKKRAGKSRS 278
>PARD3_MOUSE (Q99NH2) Partitioning-defective 3 homolog (PARD-3) (PAR-3)| (Atypical PKC isotype-specific-interacting protein) (ASIP) (Ephrin-interacting protein) (PHIP) Length = 1333 Score = 29.3 bits (64), Expect = 7.9 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 4/62 (6%) Frame = -2 Query: 187 FSI*SSCV----LISDKPSSLRPD*ALSEPPSTSEISSKLPPHSYGTTREPAFASLXRKS 20 FS S CV + ++ P +L LS+PP + +LP ++ +T+ PA +L S Sbjct: 382 FSPDSHCVANRSVANNAPQALPRAPRLSQPPEQLDAHPRLPHSAHASTKPPAAPALAPPS 441 Query: 19 AL 14 L Sbjct: 442 VL 443 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 89,311,655 Number of Sequences: 219361 Number of extensions: 1943167 Number of successful extensions: 6374 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 6063 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6365 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4585734400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
