ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags5a19
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X99517.1|ZMEIF5 Z.mays mRNA for eukaryotic initiation factor-5 137 4e-29
2emb|AJ132240.1|ZMA132240 Zea mays eIF-5 gene, exons 1-2 137 4e-29
3gb|AY104474.1| Zea mays PCO112790 mRNA sequence 137 4e-29
4gb|BT018691.1| Zea mays clone EL01N0512C10.d mRNA sequence 129 9e-27
5gb|AY112315.1| Zea mays CL1308_2 mRNA sequence 127 4e-26
6dbj|AP005931.2| Oryza sativa (japonica cultivar-group) genomic D... 101 2e-18
7ref|XM_450544.1| Oryza sativa (japonica cultivar-group), mRNA 94 5e-16
8ref|XM_506649.1| PREDICTED Oryza sativa (japonica cultivar-group... 94 5e-16
9ref|XM_450545.1| Oryza sativa (japonica cultivar-group), mRNA 94 5e-16
10dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 94 5e-16
11dbj|AP005811.3| Oryza sativa (japonica cultivar-group) genomic D... 94 5e-16
12dbj|AB117994.1| Oryza sativa (japonica cultivar-group) bip107 mR... 94 5e-16
13dbj|AK098857.1| Oryza sativa (japonica cultivar-group) cDNA clon... 94 5e-16
14dbj|AK067685.1| Oryza sativa (japonica cultivar-group) cDNA clon... 94 5e-16
15dbj|AK058307.1| Oryza sativa (japonica cultivar-group) cDNA clon... 94 5e-16
16ref|NM_106433.3| Arabidopsis thaliana translation initiation fac... 42 1.6
17ref|XM_517102.1| PREDICTED: Pan troglodytes similar to actin bin... 42 1.6
18gb|AC104856.19| Mus musculus chromosome 5, clone RP23-53G23, com... 42 1.6
19gb|AC160335.6| Mus musculus BAC clone RP23-38N19 from chromosome... 42 1.6
20gb|AC108948.3| Mus musculus BAC clone RP23-183P12 from 15, compl... 42 1.6
21gb|AC097381.3| Homo sapiens BAC clone RP11-338K13 from 4, comple... 42 1.6
22gb|AY114664.1| Arabidopsis thaliana putative eukaryotic translat... 42 1.6
23gb|AC026975.5| Homo sapiens chromosome 11, clone RP11-709C9, com... 42 1.6
24gb|AY065097.1| Arabidopsis thaliana putative eukaryotic translat... 42 1.6
25gb|AY062694.1| Arabidopsis thaliana putative eukaryotic translat... 42 1.6
26gb|AC012193.6|AC012193 Arabidopsis thaliana chromosome 1 BAC T32... 42 1.6
27gb|AC009243.3|AC009243 Genomic sequence for Arabidopsis thaliana... 42 1.6
28gb|AC125455.3| Mus musculus BAC clone RP24-170L2 from chromosome... 42 1.6
29gb|BT002163.1| Arabidopsis thaliana putative eukaryotic translat... 42 1.6
30emb|AL772232.18| Mouse DNA sequence from clone RP23-119F15 on ch... 42 1.6
31gb|AY785504.1| Arabidopsis thaliana At1g77850 gene, promoter region 42 1.6
32ref|XM_529781.1| PREDICTED: Pan troglodytes LOC454103 (LOC454103... 40 6.5
33gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome 40 6.5
34gb|BC091058.1| Xenopus tropicalis hypothetical protein LOC594878... 40 6.5
35gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, compl... 40 6.5
36emb|AL009050.9|HS191L6 Human DNA sequence from clone RP1-191L6 o... 40 6.5
37dbj|AB226103.1| Aspergillus oryzae cDNA, contig sequence: AoEST2960 40 6.5
38dbj|AP007175.1| Aspergillus oryzae RIB40 genomic DNA, SC010 40 6.5
39dbj|AP007174.1| Aspergillus oryzae RIB40 genomic DNA, SC103 40 6.5
40dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 6.5
41dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 6.5
42gb|AY103775.1| Zea mays PCO076979 mRNA sequence 40 6.5
43dbj|AP005265.2| Homo sapiens genomic DNA, chromosome 18, clone:R... 40 6.5 
>emb|X99517.1|ZMEIF5 Z.mays mRNA for eukaryotic initiation factor-5
          Length = 1975

 Score =  137 bits (69), Expect = 4e-29
 Identities = 220/269 (81%), Gaps = 1/269 (0%)
 Strand = Plus / Plus

                                                                        
Query: 15   tgaagaacaagnaagtaccttgctgctgctgtgcctgatgaagctgcccagatgctcctg 74
            ||||||||||| ||||||||||| | ||||||||| ||||| | ||||||||  || |||
Sbjct: 1412 tgaagaacaag-aagtaccttgcagttgctgtgccagatgagggtgcccagacccttctg 1470

                                                                        
Query: 75   ctccagtccattgaggcgttctgcggcaagtgcagcgccgaggccctgaaggaattgcct 134
             | ||| |||||||||| ||  | || ||||||| | | ||||| ||||||||  | || 
Sbjct: 1471 gttcaggccattgaggcttttggtgggaagtgcaaccctgaggcgctgaaggaggttccc 1530

                                                                        
Query: 135  gtcgtcctgaaggccctctatgacggagatgtccttgaggaagaaactattgtgcagtgg 194
            || ||||| || |||||||| || |||||| |||| || || ||||| |||||| | |||
Sbjct: 1531 gttgtcctcaaagccctctacgatggagatatcctggacgaggaaaccattgtggactgg 1590

                                                                        
Query: 195  tacagtgaagctgttgctgccggcaaggactcccaggttgtgaagaacgccaagcccgtc 254
            |||| ||| ||||| || || || ||||||||||||||||| ||||| ||||||||  ||
Sbjct: 1591 tacaatgatgctgtcgcagctgggaaggactcccaggttgtcaagaatgccaagccgttc 1650

                                         
Query: 255  gtggagtggctccagagcgccgagtctga 283
            || |||||||||||||| |||||||||||
Sbjct: 1651 gtcgagtggctccagagtgccgagtctga 1679
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>emb|AJ132240.1|ZMA132240 Zea mays eIF-5 gene, exons 1-2
          Length = 6831

 Score =  137 bits (69), Expect = 4e-29
 Identities = 220/269 (81%), Gaps = 1/269 (0%)
 Strand = Plus / Plus

                                                                        
Query: 15   tgaagaacaagnaagtaccttgctgctgctgtgcctgatgaagctgcccagatgctcctg 74
            ||||||||||| ||||||||||| | ||||||||| ||||| | ||||||||  || |||
Sbjct: 4611 tgaagaacaag-aagtaccttgcagttgctgtgccagatgagggtgcccagacccttctg 4669

                                                                        
Query: 75   ctccagtccattgaggcgttctgcggcaagtgcagcgccgaggccctgaaggaattgcct 134
             | ||| |||||||||| ||  | || ||||||| | | ||||| ||||||||  | || 
Sbjct: 4670 gttcaggccattgaggcttttggtgggaagtgcaaccctgaggcgctgaaggaggttccc 4729

                                                                        
Query: 135  gtcgtcctgaaggccctctatgacggagatgtccttgaggaagaaactattgtgcagtgg 194
            || ||||| || |||||||| || |||||| |||| || || ||||| |||||| | |||
Sbjct: 4730 gttgtcctcaaagccctctacgatggagatatcctggacgaggaaaccattgtggactgg 4789

                                                                        
Query: 195  tacagtgaagctgttgctgccggcaaggactcccaggttgtgaagaacgccaagcccgtc 254
            |||| ||| ||||| || || || ||||||||||||||||| ||||| ||||||||  ||
Sbjct: 4790 tacaatgatgctgtcgcagctgggaaggactcccaggttgtcaagaatgccaagccgttc 4849

                                         
Query: 255  gtggagtggctccagagcgccgagtctga 283
            || |||||||||||||| |||||||||||
Sbjct: 4850 gtcgagtggctccagagtgccgagtctga 4878
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>gb|AY104474.1| Zea mays PCO112790 mRNA sequence
          Length = 2008

 Score =  137 bits (69), Expect = 4e-29
 Identities = 220/269 (81%), Gaps = 1/269 (0%)
 Strand = Plus / Plus

                                                                        
Query: 15   tgaagaacaagnaagtaccttgctgctgctgtgcctgatgaagctgcccagatgctcctg 74
            ||||||||||| ||||||||||| | ||||||||| ||||| | ||||||||  || |||
Sbjct: 1473 tgaagaacaag-aagtaccttgcagttgctgtgccagatgagggtgcccagacccttctg 1531

                                                                        
Query: 75   ctccagtccattgaggcgttctgcggcaagtgcagcgccgaggccctgaaggaattgcct 134
             | ||| |||||||||| ||  | || ||||||| | | ||||| ||||||||  | || 
Sbjct: 1532 gttcaggccattgaggcttttggtgggaagtgcaaccctgaggcgctgaaggaggttccc 1591

                                                                        
Query: 135  gtcgtcctgaaggccctctatgacggagatgtccttgaggaagaaactattgtgcagtgg 194
            || ||||| || |||||||| || |||||| |||| || || ||||| |||||| | |||
Sbjct: 1592 gttgtcctcaaagccctctacgatggagatatcctggacgaggaaaccattgtggactgg 1651

                                                                        
Query: 195  tacagtgaagctgttgctgccggcaaggactcccaggttgtgaagaacgccaagcccgtc 254
            |||| ||| ||||| || || || ||||||||||||||||| ||||| ||||||||  ||
Sbjct: 1652 tacaatgatgctgtcgcagctgggaaggactcccaggttgtcaagaatgccaagccgttc 1711

                                         
Query: 255  gtggagtggctccagagcgccgagtctga 283
            || |||||||||||||| |||||||||||
Sbjct: 1712 gtcgagtggctccagagtgccgagtctga 1740
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>gb|BT018691.1| Zea mays clone EL01N0512C10.d mRNA sequence
          Length = 1992

 Score =  129 bits (65), Expect = 9e-27
 Identities = 219/269 (81%), Gaps = 1/269 (0%)
 Strand = Plus / Plus

                                                                        
Query: 15   tgaagaacaagnaagtaccttgctgctgctgtgcctgatgaagctgcccagatgctcctg 74
            ||||||||||| ||||||||||| | ||||||||| ||||| | ||||||||  || |||
Sbjct: 1458 tgaagaacaag-aagtaccttgcagttgctgtgccagatgagggtgcccagacccttctg 1516

                                                                        
Query: 75   ctccagtccattgaggcgttctgcggcaagtgcagcgccgaggccctgaaggaattgcct 134
             | ||| |||||||||| ||  | || ||||||| | | ||||| ||||||||  | || 
Sbjct: 1517 gttcaggccattgaggcttttggtggtaagtgcaaccctgaggcgctgaaggaggttccc 1576

                                                                        
Query: 135  gtcgtcctgaaggccctctatgacggagatgtccttgaggaagaaactattgtgcagtgg 194
            || ||||| || |||||||| || |||||| |||| || || ||||| |||||| | |||
Sbjct: 1577 gttgtcctcaaagccctctacgatggagatatcctggacgaggaaaccattgtggactgg 1636

                                                                        
Query: 195  tacagtgaagctgttgctgccggcaaggactcccaggttgtgaagaacgccaagcccgtc 254
            |||| ||| ||||| || || || ||||||||||||||||| ||||| ||||| ||  ||
Sbjct: 1637 tacaatgatgctgtcgcagctgggaaggactcccaggttgtcaagaatgccaacccgttc 1696

                                         
Query: 255  gtggagtggctccagagcgccgagtctga 283
            || |||||||||||||| |||||||||||
Sbjct: 1697 gtcgagtggctccagagtgccgagtctga 1725
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>gb|AY112315.1| Zea mays CL1308_2 mRNA sequence
          Length = 840

 Score =  127 bits (64), Expect = 4e-26
 Identities = 221/272 (81%), Gaps = 1/272 (0%)
 Strand = Plus / Plus

                                                                       
Query: 15  tgaagaacaagnaagtaccttgctgctgctgtgcctgatgaagctgcccagatgctcctg 74
           ||||||||||| ||||||||||| | ||||||||| ||||| | ||||||||  || |||
Sbjct: 218 tgaagaacaag-aagtaccttgcagttgctgtgccagatgagggtgcccagaccctgctg 276

                                                                       
Query: 75  ctccagtccattgaggcgttctgcggcaagtgcagcgccgaggccctgaaggaattgcct 134
            | ||  |||| ||||| ||  || ||||||||| | ||||||| ||||||||  | || 
Sbjct: 277 attcaagccatcgaggcttttggcagcaagtgcaaccccgaggcgctgaaggaggtccca 336

                                                                       
Query: 135 gtcgtcctgaaggccctctatgacggagatgtccttgaggaagaaactattgtgcagtgg 194
           || |||||||| ||||| || ||||||||| |||| ||||| |||||  ||||| | |||
Sbjct: 337 gttgtcctgaaagccctgtacgacggagatatcctggaggaggaaaccgttgtggactgg 396

                                                                       
Query: 195 tacagtgaagctgttgctgccggcaaggactcccaggttgtgaagaacgccaagcccgtc 254
           ||||  |  ||||| || || || |||||||||||||| || ||||| ||||||||  | 
Sbjct: 397 tacaacgctgctgtcgcagctggaaaggactcccaggtcgtcaagaatgccaagccgttt 456

                                           
Query: 255 gtggagtggctccagagcgccgagtctgacga 286
           || |||||||||||||||||||||||||||||
Sbjct: 457 gtcgagtggctccagagcgccgagtctgacga 488
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>dbj|AP005931.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0545E05
          Length = 163229

 Score =  101 bits (51), Expect = 2e-18
 Identities = 84/95 (88%)
 Strand = Plus / Minus

                                                                         
Query: 189   cagtggtacagtgaagctgttgctgccggcaaggactcccaggttgtgaagaacgccaag 248
             |||||||||| |||| |||||||||| |||||||| |||||||| |||||||| ||||| 
Sbjct: 26755 cagtggtacaatgaatctgttgctgctggcaaggagtcccaggtggtgaagaatgccaaa 26696

                                                
Query: 249   cccgtcgtggagtggctccagagcgccgagtctga 283
             ||  |||||||||||||||||||||| || |||||
Sbjct: 26695 ccattcgtggagtggctccagagcgcggattctga 26661



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 39    gctgctgtgcctgatgaagctgcccagatgctcctgct 76
             |||||||| |||||||||||  |||||||| |||||||
Sbjct: 26905 gctgctgtacctgatgaagcctcccagatggtcctgct 26868
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>ref|XM_450544.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2008

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 83/95 (87%)
 Strand = Plus / Plus

                                                                        
Query: 189  cagtggtacagtgaagctgttgctgccggcaaggactcccaggttgtgaagaacgccaag 248
            |||||||| | |||| |||||||||  |||||||| |||||||| |||||||| ||||||
Sbjct: 1654 cagtggtataatgaatctgttgctggtggcaaggagtcccaggtggtgaagaatgccaag 1713

                                               
Query: 249  cccgtcgtggagtggctccagagcgccgagtctga 283
            ||  |||||||||||||||||||||| || |||||
Sbjct: 1714 ccgttcgtggagtggctccagagcgcggattctga 1748



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                     
Query: 36   gctgctgctgtgcctgatgaagctgcccagatgctcctgct 76
            |||||||||||||||||||||||  |||||||| |||||||
Sbjct: 1501 gctgctgctgtgcctgatgaagcctcccagatggtcctgct 1541
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>ref|XM_506649.1| PREDICTED Oryza sativa (japonica cultivar-group), P0706E03.4-1 mRNA
          Length = 2011

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 83/95 (87%)
 Strand = Plus / Plus

                                                                        
Query: 189  cagtggtacagtgaagctgttgctgccggcaaggactcccaggttgtgaagaacgccaag 248
            |||||||| | |||| |||||||||  |||||||| |||||||| |||||||| ||||||
Sbjct: 1657 cagtggtataatgaatctgttgctggtggcaaggagtcccaggtggtgaagaatgccaag 1716

                                               
Query: 249  cccgtcgtggagtggctccagagcgccgagtctga 283
            ||  |||||||||||||||||||||| || |||||
Sbjct: 1717 ccgttcgtggagtggctccagagcgcggattctga 1751



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                     
Query: 36   gctgctgctgtgcctgatgaagctgcccagatgctcctgct 76
            |||||||||||||||||||||||  |||||||| |||||||
Sbjct: 1504 gctgctgctgtgcctgatgaagcctcccagatggtcctgct 1544
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>ref|XM_450545.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1407

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 83/95 (87%)
 Strand = Plus / Plus

                                                                        
Query: 189  cagtggtacagtgaagctgttgctgccggcaaggactcccaggttgtgaagaacgccaag 248
            |||||||| | |||| |||||||||  |||||||| |||||||| |||||||| ||||||
Sbjct: 1060 cagtggtataatgaatctgttgctggtggcaaggagtcccaggtggtgaagaatgccaag 1119

                                               
Query: 249  cccgtcgtggagtggctccagagcgccgagtctga 283
            ||  |||||||||||||||||||||| || |||||
Sbjct: 1120 ccgttcgtggagtggctccagagcgcggattctga 1154



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                    
Query: 36  gctgctgctgtgcctgatgaagctgcccagatgctcctgct 76
           |||||||||||||||||||||||  |||||||| |||||||
Sbjct: 907 gctgctgctgtgcctgatgaagcctcccagatggtcctgct 947
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 83/95 (87%)
 Strand = Plus / Plus

                                                                           
Query: 189     cagtggtacagtgaagctgttgctgccggcaaggactcccaggttgtgaagaacgccaag 248
               |||||||| | |||| |||||||||  |||||||| |||||||| |||||||| ||||||
Sbjct: 9584800 cagtggtataatgaatctgttgctggtggcaaggagtcccaggtggtgaagaatgccaag 9584859

                                                  
Query: 249     cccgtcgtggagtggctccagagcgccgagtctga 283
               ||  |||||||||||||||||||||| || |||||
Sbjct: 9584860 ccgttcgtggagtggctccagagcgcggattctga 9584894



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                        
Query: 36      gctgctgctgtgcctgatgaagctgcccagatgctcctgct 76
               |||||||||||||||||||||||  |||||||| |||||||
Sbjct: 9584647 gctgctgctgtgcctgatgaagcctcccagatggtcctgct 9584687
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>dbj|AP005811.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0706E03
          Length = 188028

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 83/95 (87%)
 Strand = Plus / Plus

                                                                         
Query: 189   cagtggtacagtgaagctgttgctgccggcaaggactcccaggttgtgaagaacgccaag 248
             |||||||| | |||| |||||||||  |||||||| |||||||| |||||||| ||||||
Sbjct: 24897 cagtggtataatgaatctgttgctggtggcaaggagtcccaggtggtgaagaatgccaag 24956

                                                
Query: 249   cccgtcgtggagtggctccagagcgccgagtctga 283
             ||  |||||||||||||||||||||| || |||||
Sbjct: 24957 ccgttcgtggagtggctccagagcgcggattctga 24991



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                      
Query: 36    gctgctgctgtgcctgatgaagctgcccagatgctcctgct 76
             |||||||||||||||||||||||  |||||||| |||||||
Sbjct: 24744 gctgctgctgtgcctgatgaagcctcccagatggtcctgct 24784
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>dbj|AB117994.1| Oryza sativa (japonica cultivar-group) bip107 mRNA for BRI1-KD
            interacting protein 107, partial cds
          Length = 1430

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 83/95 (87%)
 Strand = Plus / Plus

                                                                        
Query: 189  cagtggtacagtgaagctgttgctgccggcaaggactcccaggttgtgaagaacgccaag 248
            |||||||| | |||| |||||||||  |||||||| |||||||| |||||||| ||||||
Sbjct: 1058 cagtggtataatgaatctgttgctggtggcaaggagtcccaggtggtgaagaatgccaag 1117

                                               
Query: 249  cccgtcgtggagtggctccagagcgccgagtctga 283
            ||  |||||||||||||||||||||| || |||||
Sbjct: 1118 ccgttcgtggagtggctccagagcgcggattctga 1152



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                    
Query: 36  gctgctgctgtgcctgatgaagctgcccagatgctcctgct 76
           |||||||||||||||||||||||  |||||||| |||||||
Sbjct: 905 gctgctgctgtgcctgatgaagcctcccagatggtcctgct 945
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>dbj|AK098857.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000L01, full
            insert sequence
          Length = 2008

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 83/95 (87%)
 Strand = Plus / Plus

                                                                        
Query: 189  cagtggtacagtgaagctgttgctgccggcaaggactcccaggttgtgaagaacgccaag 248
            |||||||| | |||| |||||||||  |||||||| |||||||| |||||||| ||||||
Sbjct: 1654 cagtggtataatgaatctgttgctggtggcaaggagtcccaggtggtgaagaatgccaag 1713

                                               
Query: 249  cccgtcgtggagtggctccagagcgccgagtctga 283
            ||  |||||||||||||||||||||| || |||||
Sbjct: 1714 ccgttcgtggagtggctccagagcgcggattctga 1748



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                     
Query: 36   gctgctgctgtgcctgatgaagctgcccagatgctcctgct 76
            |||||||||||||||||||||||  |||||||| |||||||
Sbjct: 1501 gctgctgctgtgcctgatgaagcctcccagatggtcctgct 1541
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>dbj|AK067685.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116G06, full
            insert sequence
          Length = 2010

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 83/95 (87%)
 Strand = Plus / Plus

                                                                        
Query: 189  cagtggtacagtgaagctgttgctgccggcaaggactcccaggttgtgaagaacgccaag 248
            |||||||| | |||| |||||||||  |||||||| |||||||| |||||||| ||||||
Sbjct: 1656 cagtggtataatgaatctgttgctggtggcaaggagtcccaggtggtgaagaatgccaag 1715

                                               
Query: 249  cccgtcgtggagtggctccagagcgccgagtctga 283
            ||  |||||||||||||||||||||| || |||||
Sbjct: 1716 ccgttcgtggagtggctccagagcgcggattctga 1750



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                     
Query: 36   gctgctgctgtgcctgatgaagctgcccagatgctcctgct 76
            |||||||||||||||||||||||  |||||||| |||||||
Sbjct: 1503 gctgctgctgtgcctgatgaagcctcccagatggtcctgct 1543
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>dbj|AK058307.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H04, full
            insert sequence
          Length = 1407

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 83/95 (87%)
 Strand = Plus / Plus

                                                                        
Query: 189  cagtggtacagtgaagctgttgctgccggcaaggactcccaggttgtgaagaacgccaag 248
            |||||||| | |||| |||||||||  |||||||| |||||||| |||||||| ||||||
Sbjct: 1060 cagtggtataatgaatctgttgctggtggcaaggagtcccaggtggtgaagaatgccaag 1119

                                               
Query: 249  cccgtcgtggagtggctccagagcgccgagtctga 283
            ||  |||||||||||||||||||||| || |||||
Sbjct: 1120 ccgttcgtggagtggctccagagcgcggattctga 1154



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                    
Query: 36  gctgctgctgtgcctgatgaagctgcccagatgctcctgct 76
           |||||||||||||||||||||||  |||||||| |||||||
Sbjct: 907 gctgctgctgtgcctgatgaagcctcccagatggtcctgct 947
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>ref|NM_106433.3| Arabidopsis thaliana translation initiation factor AT1G77840 mRNA,
            complete cds
          Length = 1788

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 255  gtggagtggctccagagcgccgagtctga 283
            ||||||||||| |||||||| ||||||||
Sbjct: 1555 gtggagtggcttcagagcgctgagtctga 1583
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>ref|XM_517102.1| PREDICTED: Pan troglodytes similar to actin binding LIM protein
            family, member 2; actin binding LIM protein 2
            (LOC461112), mRNA
          Length = 5823

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 196  acagtgaagctgttgctgccg 216
            |||||||||||||||||||||
Sbjct: 3514 acagtgaagctgttgctgccg 3494
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>gb|AC104856.19| Mus musculus chromosome 5, clone RP23-53G23, complete sequence
          Length = 169800

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 372   tgtgtttgaagtgtccctcgttgtc 396
             ||||||||||||||||||| |||||
Sbjct: 87523 tgtgtttgaagtgtccctccttgtc 87499
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>gb|AC160335.6| Mus musculus BAC clone RP23-38N19 from chromosome 15, complete
            sequence
          Length = 212090

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 372  tgtgtttgaagtgtccctcgttgtc 396
            ||||||||||||||||||| |||||
Sbjct: 8176 tgtgtttgaagtgtccctccttgtc 8200
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>gb|AC108948.3| Mus musculus BAC clone RP23-183P12 from 15, complete sequence
          Length = 196923

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 372    tgtgtttgaagtgtccctcgttgtc 396
              ||||||||||||||||||| |||||
Sbjct: 125246 tgtgtttgaagtgtccctccttgtc 125270
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>gb|AC097381.3| Homo sapiens BAC clone RP11-338K13 from 4, complete sequence
          Length = 214098

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 196    acagtgaagctgttgctgccg 216
              |||||||||||||||||||||
Sbjct: 166260 acagtgaagctgttgctgccg 166280
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>gb|AY114664.1| Arabidopsis thaliana putative eukaryotic translation initiation
            factor 5 (At1g77840) mRNA, complete cds
          Length = 1348

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 255  gtggagtggctccagagcgccgagtctga 283
            ||||||||||| |||||||| ||||||||
Sbjct: 1267 gtggagtggcttcagagcgctgagtctga 1295
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>gb|AC026975.5| Homo sapiens chromosome 11, clone RP11-709C9, complete sequence
          Length = 200105

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 407   atttggagtttgagtcagttg 427
             |||||||||||||||||||||
Sbjct: 26029 atttggagtttgagtcagttg 26049
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>gb|AY065097.1| Arabidopsis thaliana putative eukaryotic translation initiation
            factor 5 (At1g77840; T32E8.15) mRNA, complete cds
          Length = 1770

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 255  gtggagtggctccagagcgccgagtctga 283
            ||||||||||| |||||||| ||||||||
Sbjct: 1555 gtggagtggcttcagagcgctgagtctga 1583
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>gb|AY062694.1| Arabidopsis thaliana putative eukaryotic translation initiation
            factor 5 (At1g77840; T32E8.15) mRNA, complete cds
          Length = 1784

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 255  gtggagtggctccagagcgccgagtctga 283
            ||||||||||| |||||||| ||||||||
Sbjct: 1552 gtggagtggcttcagagcgctgagtctga 1580
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>gb|AC012193.6|AC012193 Arabidopsis thaliana chromosome 1 BAC T32E8 genomic sequence, complete
             sequence
          Length = 82454

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 255   gtggagtggctccagagcgccgagtctga 283
             ||||||||||| |||||||| ||||||||
Sbjct: 77710 gtggagtggcttcagagcgctgagtctga 77738
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>gb|AC009243.3|AC009243 Genomic sequence for Arabidopsis thaliana BAC F28K19 from chromosome I,
             complete sequence
          Length = 110565

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 255   gtggagtggctccagagcgccgagtctga 283
             ||||||||||| |||||||| ||||||||
Sbjct: 13618 gtggagtggcttcagagcgctgagtctga 13646
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>gb|AC125455.3| Mus musculus BAC clone RP24-170L2 from chromosome 15, complete sequence
          Length = 145059

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 372   tgtgtttgaagtgtccctcgttgtc 396
             ||||||||||||||||||| |||||
Sbjct: 92726 tgtgtttgaagtgtccctccttgtc 92702
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>gb|BT002163.1| Arabidopsis thaliana putative eukaryotic translation initiation
            factor 5 (At1g77840) mRNA, complete cds
          Length = 1348

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 255  gtggagtggctccagagcgccgagtctga 283
            ||||||||||| |||||||| ||||||||
Sbjct: 1267 gtggagtggcttcagagcgctgagtctga 1295
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>emb|AL772232.18| Mouse DNA sequence from clone RP23-119F15 on chromosome 4, complete
             sequence
          Length = 157168

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 35    tgctgctgctgtgcctgatga 55
             |||||||||||||||||||||
Sbjct: 29994 tgctgctgctgtgcctgatga 30014
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>gb|AY785504.1| Arabidopsis thaliana At1g77850 gene, promoter region
          Length = 2500

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 255 gtggagtggctccagagcgccgagtctga 283
           ||||||||||| |||||||| ||||||||
Sbjct: 449 gtggagtggcttcagagcgctgagtctga 477
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>ref|XM_529781.1| PREDICTED: Pan troglodytes LOC454103 (LOC454103), mRNA
          Length = 552

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 35  tgctgctgctgtgcctgatg 54
           ||||||||||||||||||||
Sbjct: 417 tgctgctgctgtgcctgatg 436
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>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome
          Length = 2364842

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 142    tgaaggccctctatgacgga 161
              ||||||||||||||||||||
Sbjct: 138072 tgaaggccctctatgacgga 138053
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>gb|BC091058.1| Xenopus tropicalis hypothetical protein LOC594878, mRNA (cDNA clone
           IMAGE:7022094), partial cds
          Length = 1691

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 29  gtaccttgctgctgctgtgc 48
           ||||||||||||||||||||
Sbjct: 108 gtaccttgctgctgctgtgc 127
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>gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, complete sequence
          Length = 1471779

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 57     gctgcccagatgctcctgct 76
              ||||||||||||||||||||
Sbjct: 772037 gctgcccagatgctcctgct 772056
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>emb|AL009050.9|HS191L6 Human DNA sequence from clone RP1-191L6 on chromosome 20q12 Contains a
              novel gene, complete sequence
          Length = 125517

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 186    gtgcagtggtacagtgaagctgtt 209
              ||||||||||||||||| ||||||
Sbjct: 124429 gtgcagtggtacagtgatgctgtt 124452
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>dbj|AB226103.1| Aspergillus oryzae cDNA, contig sequence: AoEST2960
          Length = 720

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 216 ggcaaggactcccaggttgt 235
           ||||||||||||||||||||
Sbjct: 327 ggcaaggactcccaggttgt 346
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>dbj|AP007175.1| Aspergillus oryzae RIB40 genomic DNA, SC010
          Length = 2039961

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 128    attgcctgtcgtcctgaagg 147
              ||||||||||||||||||||
Sbjct: 208909 attgcctgtcgtcctgaagg 208928
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>dbj|AP007174.1| Aspergillus oryzae RIB40 genomic DNA, SC103
          Length = 1282697

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 216    ggcaaggactcccaggttgt 235
              ||||||||||||||||||||
Sbjct: 854189 ggcaaggactcccaggttgt 854208
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 106     gcagcgccgaggccctgaag 125
               ||||||||||||||||||||
Sbjct: 1571419 gcagcgccgaggccctgaag 1571400
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 99      ggcaagtgcagcgccgaggc 118
               ||||||||||||||||||||
Sbjct: 8835653 ggcaagtgcagcgccgaggc 8835634
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>gb|AY103775.1| Zea mays PCO076979 mRNA sequence
          Length = 1495

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 32  ccttgctgctgctgtgcctg 51
           ||||||||||||||||||||
Sbjct: 163 ccttgctgctgctgtgcctg 182
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>dbj|AP005265.2| Homo sapiens genomic DNA, chromosome 18, clone:RP11-78F17, complete
             sequence
          Length = 51000

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 408   tttggagtttgagtcagttgagtt 431
             |||||||||||||||| |||||||
Sbjct: 20211 tttggagtttgagtcatttgagtt 20234


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,284,184
Number of Sequences: 3902068
Number of extensions: 4284184
Number of successful extensions: 97810
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 97595
Number of HSP's gapped (non-prelim): 214
length of query: 478
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 456
effective length of database: 17,147,199,772
effective search space: 7819123096032
effective search space used: 7819123096032
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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