ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags5a18 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009473.1| Triticum aestivum clone wr1.pk0030.b10:fis, full insert mRNA sequence Length = 2604 Score = 1080 bits (545), Expect = 0.0 Identities = 596/613 (97%) Strand = Plus / Plus Query: 13 gcgaaaacaatgatgatgaagatgaagtgcttcttgcaatggctgaagaattgggtgtgt 72 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 261 gcgaaaacaatgatgatgaagatgaggtgcttcttgcaatggctgaagaattgggtgtgt 320 Query: 73 tcattccttatgttggtggtgtagagcatgctcatgttttgcttccaccattggagacat 132 |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| Sbjct: 321 tcattccttatgttgggggtgtagagcatgctcatgttttgctcccaccattggagacat 380 Query: 133 tgtctacggtggaggaaacctgtgtccgagacaaagcagttgagtcgctgtgccgcattg 192 ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||| Sbjct: 381 tgtctacggtggaggaaacttgtgtccgagacaaagcagttgagtcgttgtgccgtattg 440 Query: 193 gtgcacagatgaaagaaaacgacattgttgactatttcattccagtagtaaagaggctag 252 ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct: 441 gtgcacagatgaaagaaaatgacattgttgactatttcattgcagtagtaaagaggctag 500 Query: 253 cagctggtgagtggtttacagctcgagtgtcatcctgtggtcttttccatatagcctatc 312 | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 501 cggctggtgagtggtttacagctcgagtatcatcctgtggtcttttccatatagcctatc 560 Query: 313 caagtgccaccgatccgttgaaaacagaattgaggactatttatggccagttatgccaag 372 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 561 caagtgccaccgatccgttgaaaacagaactgaggactatttatggccagttatgccaag 620 Query: 373 atgatatgcctatggtcagaagggcagctgcatcaaatcttgggaagtttgctgccactg 432 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 621 atgacatgcctatggtcagaagggcagctgcatcaaatcttgggaagtttgctgccactg 680 Query: 433 tagaacagagccatttgaagacagaaatcatgtcgatctttgatgatcttacccaagatg 492 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 681 ttgaacagagccatttgaagacagaaatcatgtcgatctttgatgatcttacccaagatg 740 Query: 493 atcaagattcagtacgtttgttggcagttgaaggctgtgccgctcttggaaaattgttag 552 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 741 atcaagattcagtacgtttattggcagttgaaggctgtgccgctcttggaaaattgttag 800 Query: 553 aaccccaagattgtgtagcacatatccttcctgtcattgtcaatttctcccaggataaat 612 ||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||| Sbjct: 801 aaccccaagattgtgtagcccatatccttccagtcattgttaatttctcccaggataaat 860 Query: 613 cttggcgtgtccg 625 ||||||||||||| Sbjct: 861 cttggcgtgtccg 873
>ref|XM_450276.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2211 Score = 716 bits (361), Expect = 0.0 Identities = 544/605 (89%) Strand = Plus / Plus Query: 15 gaaaacaatgatgatgaagatgaagtgcttcttgcaatggctgaagaattgggtgtgttc 74 ||||| ||||| ||||||||||| ||||||||||| ||||||||||||||||| |||||| Sbjct: 365 gaaaataatgacgatgaagatgaggtgcttcttgctatggctgaagaattgggcgtgttc 424 Query: 75 attccttatgttggtggtgtagagcatgctcatgttttgcttccaccattggagacattg 134 |||||||| ||||| |||||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 425 attccttacgttgggggtgtagaacatgctcatgttttgctaccaccattggagacattg 484 Query: 135 tctacggtggaggaaacctgtgtccgagacaaagcagttgagtcgctgtgccgcattggt 194 | ||| |||||||||||||||||||||||||| |||||||| || |||||||| ||||| Sbjct: 485 tgtacagtggaggaaacctgtgtccgagacaaggcagttgaatctctgtgccgtattgga 544 Query: 195 gcacagatgaaagaaaacgacattgttgactatttcattccagtagtaaagaggctagca 254 ||||||||||| |||| |||||||| |||| ||| ||||||||||||||||||||||| Sbjct: 545 gcacagatgaaggaaagtgacattgtagactggttcgttccagtagtaaagaggctagca 604 Query: 255 gctggtgagtggtttacagctcgagtgtcatcctgtggtcttttccatatagcctatcca 314 |||||||||||||||||||||||||| || || ||||| |||||||||||||| |||||| Sbjct: 605 gctggtgagtggtttacagctcgagtatcgtcttgtggacttttccatatagcatatcca 664 Query: 315 agtgccaccgatccgttgaaaacagaattgaggactatttatggccagttatgccaagat 374 ||||| | |||| ||||| ||||||||||||| |||||||| ||| ||||||||||| Sbjct: 665 agtgctcctgatcaattgaaggcagaattgaggaccatttatggtcagctatgccaagat 724 Query: 375 gatatgcctatggtcagaagggcagctgcatcaaatcttgggaagtttgctgccactgta 434 || |||||||||||| ||||||||||||||||||||||||| |||||||| ||||| || Sbjct: 725 gacatgcctatggtccgaagggcagctgcatcaaatcttggaaagtttgcagccacagtt 784 Query: 435 gaacagagccatttgaagacagaaatcatgtcgatctttgatgatcttacccaagatgat 494 ||||||| | || | ||||||||| |||||||||| ||||||||||| |||||||||||| Sbjct: 785 gaacagaactatctaaagacagaagtcatgtcgatatttgatgatctaacccaagatgat 844 Query: 495 caagattcagtacgtttgttggcagttgaaggctgtgccgctcttggaaaattgttagaa 554 |||||||| ||||| ||||||||||||||||||||||| |||||||| |||||||| ||| Sbjct: 845 caagattccgtacgcttgttggcagttgaaggctgtgctgctcttgggaaattgttggaa 904 Query: 555 ccccaagattgtgtagcacatatccttcctgtcattgtcaatttctcccaggataaatct 614 || |||||||||||||||||||||||||| || |||||||||||||||||||| ||||| Sbjct: 905 ccacaagattgtgtagcacatatccttccagttattgtcaatttctcccaggacaaatca 964 Query: 615 tggcg 619 ||||| Sbjct: 965 tggcg 969
>dbj|AK069757.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031G02, full insert sequence Length = 2210 Score = 716 bits (361), Expect = 0.0 Identities = 544/605 (89%) Strand = Plus / Plus Query: 15 gaaaacaatgatgatgaagatgaagtgcttcttgcaatggctgaagaattgggtgtgttc 74 ||||| ||||| ||||||||||| ||||||||||| ||||||||||||||||| |||||| Sbjct: 364 gaaaataatgacgatgaagatgaggtgcttcttgctatggctgaagaattgggcgtgttc 423 Query: 75 attccttatgttggtggtgtagagcatgctcatgttttgcttccaccattggagacattg 134 |||||||| ||||| |||||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 424 attccttacgttgggggtgtagaacatgctcatgttttgctaccaccattggagacattg 483 Query: 135 tctacggtggaggaaacctgtgtccgagacaaagcagttgagtcgctgtgccgcattggt 194 | ||| |||||||||||||||||||||||||| |||||||| || |||||||| ||||| Sbjct: 484 tgtacagtggaggaaacctgtgtccgagacaaggcagttgaatctctgtgccgtattgga 543 Query: 195 gcacagatgaaagaaaacgacattgttgactatttcattccagtagtaaagaggctagca 254 ||||||||||| |||| |||||||| |||| ||| ||||||||||||||||||||||| Sbjct: 544 gcacagatgaaggaaagtgacattgtagactggttcgttccagtagtaaagaggctagca 603 Query: 255 gctggtgagtggtttacagctcgagtgtcatcctgtggtcttttccatatagcctatcca 314 |||||||||||||||||||||||||| || || ||||| |||||||||||||| |||||| Sbjct: 604 gctggtgagtggtttacagctcgagtatcgtcttgtggacttttccatatagcatatcca 663 Query: 315 agtgccaccgatccgttgaaaacagaattgaggactatttatggccagttatgccaagat 374 ||||| | |||| ||||| ||||||||||||| |||||||| ||| ||||||||||| Sbjct: 664 agtgctcctgatcaattgaaggcagaattgaggaccatttatggtcagctatgccaagat 723 Query: 375 gatatgcctatggtcagaagggcagctgcatcaaatcttgggaagtttgctgccactgta 434 || |||||||||||| ||||||||||||||||||||||||| |||||||| ||||| || Sbjct: 724 gacatgcctatggtccgaagggcagctgcatcaaatcttggaaagtttgcagccacagtt 783 Query: 435 gaacagagccatttgaagacagaaatcatgtcgatctttgatgatcttacccaagatgat 494 ||||||| | || | ||||||||| |||||||||| ||||||||||| |||||||||||| Sbjct: 784 gaacagaactatctaaagacagaagtcatgtcgatatttgatgatctaacccaagatgat 843 Query: 495 caagattcagtacgtttgttggcagttgaaggctgtgccgctcttggaaaattgttagaa 554 |||||||| ||||| ||||||||||||||||||||||| |||||||| |||||||| ||| Sbjct: 844 caagattccgtacgcttgttggcagttgaaggctgtgctgctcttgggaaattgttggaa 903 Query: 555 ccccaagattgtgtagcacatatccttcctgtcattgtcaatttctcccaggataaatct 614 || |||||||||||||||||||||||||| || |||||||||||||||||||| ||||| Sbjct: 904 ccacaagattgtgtagcacatatccttccagttattgtcaatttctcccaggacaaatca 963 Query: 615 tggcg 619 ||||| Sbjct: 964 tggcg 968
>emb|AJ243828.1|OSA243828 Oryza sativa mRNA for protein phosphatase 2A regulatory A subunit (RPA1 gene) Length = 2225 Score = 708 bits (357), Expect = 0.0 Identities = 543/605 (89%) Strand = Plus / Plus Query: 15 gaaaacaatgatgatgaagatgaagtgcttcttgcaatggctgaagaattgggtgtgttc 74 ||||| ||||| ||||||||||| ||||||||||| ||||||||||||||||| |||||| Sbjct: 329 gaaaataatgacgatgaagatgaggtgcttcttgctatggctgaagaattgggcgtgttc 388 Query: 75 attccttatgttggtggtgtagagcatgctcatgttttgcttccaccattggagacattg 134 |||||||| ||||| |||||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 389 attccttacgttgggggtgtagaacatgctcatgttttgctaccaccattggagacattg 448 Query: 135 tctacggtggaggaaacctgtgtccgagacaaagcagttgagtcgctgtgccgcattggt 194 | ||| |||||||||||||||||||||||||| |||||||| || |||||||| ||||| Sbjct: 449 tgtacagtggaggaaacctgtgtccgagacaaggcagttgaatctctgtgccgtattgga 508 Query: 195 gcacagatgaaagaaaacgacattgttgactatttcattccagtagtaaagaggctagca 254 ||||||||||| |||| |||||||| |||| ||| ||||||||||||||||||||||| Sbjct: 509 gcacagatgaaggaaagtgacattgtagactggttcgttccagtagtaaagaggctagca 568 Query: 255 gctggtgagtggtttacagctcgagtgtcatcctgtggtcttttccatatagcctatcca 314 |||||||||||||||||||||||||| || || ||||| |||||||||||||| |||||| Sbjct: 569 gctggtgagtggtttacagctcgagtatcgtcttgtggacttttccatatagcatatcca 628 Query: 315 agtgccaccgatccgttgaaaacagaattgaggactatttatggccagttatgccaagat 374 ||||| | |||| ||||| ||||||||||||| |||||||| ||| ||||||||||| Sbjct: 629 agtgctcctgatcaattgaaggcagaattgaggaccatttatggtcagctatgccaagat 688 Query: 375 gatatgcctatggtcagaagggcagctgcatcaaatcttgggaagtttgctgccactgta 434 || |||||||||||| |||||||||||||||||||||| || |||||||| ||||| || Sbjct: 689 gacatgcctatggtccgaagggcagctgcatcaaatctcggaaagtttgcagccacagtt 748 Query: 435 gaacagagccatttgaagacagaaatcatgtcgatctttgatgatcttacccaagatgat 494 ||||||| | || | ||||||||| |||||||||| ||||||||||| |||||||||||| Sbjct: 749 gaacagaactatctaaagacagaagtcatgtcgatatttgatgatctaacccaagatgat 808 Query: 495 caagattcagtacgtttgttggcagttgaaggctgtgccgctcttggaaaattgttagaa 554 |||||||| ||||| ||||||||||||||||||||||| |||||||| |||||||| ||| Sbjct: 809 caagattccgtacgcttgttggcagttgaaggctgtgctgctcttgggaaattgttggaa 868 Query: 555 ccccaagattgtgtagcacatatccttcctgtcattgtcaatttctcccaggataaatct 614 || |||||||||||||||||||||||||| || |||||||||||||||||||| ||||| Sbjct: 869 ccacaagattgtgtagcacatatccttccagttattgtcaatttctcccaggacaaatca 928 Query: 615 tggcg 619 ||||| Sbjct: 929 tggcg 933
>gb|AY940682.1| Zea mays protein phosphatase 2A regulatory subunit A mRNA, complete cds Length = 2106 Score = 674 bits (340), Expect = 0.0 Identities = 541/608 (88%) Strand = Plus / Plus Query: 15 gaaaacaatgatgatgaagatgaagtgcttcttgcaatggctgaagaattgggtgtgttc 74 |||||||| ||||||||||| || |||||||||||||||||||| ||||||||||||||| Sbjct: 323 gaaaacaacgatgatgaagacgaggtgcttcttgcaatggctgaggaattgggtgtgttc 382 Query: 75 attccttatgttggtggtgtagagcatgctcatgttttgcttccaccattggagacattg 134 ||||| ||||||||||||||||| ||||||||||||||||| ||||| |||||||||||| Sbjct: 383 attccgtatgttggtggtgtagaacatgctcatgttttgctcccacctttggagacattg 442 Query: 135 tctacggtggaggaaacctgtgtccgagacaaagcagttgagtcgctgtgccgcattggt 194 | ||| ||||||||||| |||||||| || ||||||||||| || |||||||| |||||| Sbjct: 443 tgtacagtggaggaaacttgtgtccgtgataaagcagttgaatctctgtgccgtattggt 502 Query: 195 gcacagatgaaagaaaacgacattgttgactatttcattccagtagtaaagaggctagca 254 ||||| ||||| |||| |||||||| |||| ||||||||||||||||||||||||||| Sbjct: 503 gcacaaatgaaggaaactgacattgtcgactggttcattccagtagtaaagaggctagca 562 Query: 255 gctggtgagtggtttacagctcgagtgtcatcctgtggtcttttccatatagcctatcca 314 ||||| ||||||||||||||||| || || ||||||||||||||||| |||||||||||| Sbjct: 563 gctggagagtggtttacagctcgcgtatcgtcctgtggtcttttccacatagcctatcca 622 Query: 315 agtgccaccgatccgttgaaaacagaattgaggactatttatggccagttatgccaagat 374 ||||| | || | ||||||||||||||||||||||| ||||| ||| |||| || ||| Sbjct: 623 agtgcgtcggaccaattgaaaacagaattgaggactatctatggtcagctatgtcaggat 682 Query: 375 gatatgcctatggtcagaagggcagctgcatcaaatcttgggaagtttgctgccactgta 434 || ||||||||||||||||| ||||| |||||||||||||| |||||||| || || || Sbjct: 683 gacatgcctatggtcagaagagcagcagcatcaaatcttggaaagtttgcagctacagtt 742 Query: 435 gaacagagccatttgaagacagaaatcatgtcgatctttgatgatcttacccaagatgat 494 ||||||| ||||||||||||||||| ||||| || ||||||||| | |||||||||||| Sbjct: 743 gaacagaatcatttgaagacagaaataatgtcaatatttgatgatttaacccaagatgat 802 Query: 495 caagattcagtacgtttgttggcagttgaaggctgtgccgctcttggaaaattgttagaa 554 ||||||||||| ||| ||||||| |||||||||||||| || ||||| |||||||| ||| Sbjct: 803 caagattcagtgcgtctgttggctgttgaaggctgtgctgcccttggtaaattgttggaa 862 Query: 555 ccccaagattgtgtagcacatatccttcctgtcattgtcaatttctcccaggataaatct 614 || |||||||| |||||||| || ||||| ||||||||||||||||||||||||||||| Sbjct: 863 ccacaagattgcgtagcacacattcttccagtcattgtcaatttctcccaggataaatca 922 Query: 615 tggcgtgt 622 |||||||| Sbjct: 923 tggcgtgt 930
>gb|BT018906.1| Zea mays clone EL01T0208F11.d mRNA sequence Length = 2095 Score = 668 bits (337), Expect = 0.0 Identities = 542/609 (88%), Gaps = 1/609 (0%) Strand = Plus / Plus Query: 15 gaaaacaatgatgatgaagatgaagtgcttcttgcaatggctgaagaattgggtgtgttc 74 |||||||| ||||||||||| || |||||||||||||||||||| ||||||||||||||| Sbjct: 298 gaaaacaacgatgatgaagacgaggtgcttcttgcaatggctgaggaattgggtgtgttc 357 Query: 75 attccttatgttggtggtgtagagcatgctcatgttttgcttccaccattggagacattg 134 ||||| ||||||||||||||||| ||||||||||||||||| ||||| |||||||||||| Sbjct: 358 attccgtatgttggtggtgtagaacatgctcatgttttgctcccacctttggagacattg 417 Query: 135 tctacggtggaggaaacctgtgtccgagacaaagcagttgagtcgctgtgccgcattggt 194 | ||| ||||||||||| |||||||| || ||||||||||| || |||||||| |||||| Sbjct: 418 tgtacagtggaggaaacttgtgtccgtgataaagcagttgaatctctgtgccgtattggt 477 Query: 195 gcacagatgaaagaaaacgacattgttgactatttcattccagtagtaaagaggctagca 254 ||||| ||||| |||| |||||||| |||| ||||||||||||||||||||||||||| Sbjct: 478 gcacaaatgaaggaaactgacattgtcgactggttcattccagtagtaaagaggctagca 537 Query: 255 gctggtgagtggtttacagctcgagtgtcatcctgtggtcttttccatatagcctatcca 314 ||||| ||||||||||||||||| || || ||||||||||||||||| |||||||||||| Sbjct: 538 gctggagagtggtttacagctcgcgtatcgtcctgtggtcttttccacatagcctatcca 597 Query: 315 agtgccaccgatccgttgaaaacagaattgaggactatttatggccagttatgccaagat 374 ||||| | || | ||||||||||||||||||||||| ||||| ||| |||| || ||| Sbjct: 598 agtgcgtcggaccaattgaaaacagaattgaggactatctatggtcagctatgtcaggat 657 Query: 375 gatatgcctatggtcagaagggcagctgcatcaaatcttgggaagtttgctgccactgta 434 || ||||||||||||||||| |||||||||||||||||||| |||||||| || || || Sbjct: 658 gacatgcctatggtcagaagagcagctgcatcaaatcttggaaagtttgcagctacagtt 717 Query: 435 gaacagagccatttgaagacagaaatcatgtcgatctttgatgatcttacccaagatgat 494 ||||||| ||||||||||||||||| ||||| || ||||||||| | |||||||||||| Sbjct: 718 gaacagaatcatttgaagacagaaataatgtcaatatttgatgatttaacccaagatgat 777 Query: 495 caagattcagtacgtttgttggcagttgaaggctgtgccg-ctcttggaaaattgttaga 553 ||||||||||| ||| ||||||| |||||||||||||| | | ||||| |||||||| || Sbjct: 778 caagattcagtgcgtctgttggctgttgaaggctgtgctgccccttggtaaattgttgga 837 Query: 554 accccaagattgtgtagcacatatccttcctgtcattgtcaatttctcccaggataaatc 613 ||| |||||||| |||||||| || ||||| ||||||||||||||||||||||||||||| Sbjct: 838 accacaagattgcgtagcacacattcttccagtcattgtcaatttctcccaggataaatc 897 Query: 614 ttggcgtgt 622 |||||||| Sbjct: 898 atggcgtgt 906
>gb|BT016817.1| Zea mays clone Contig650 mRNA sequence Length = 1853 Score = 664 bits (335), Expect = 0.0 Identities = 533/599 (88%) Strand = Plus / Plus Query: 24 gatgatgaagatgaagtgcttcttgcaatggctgaagaattgggtgtgttcattccttat 83 ||||||||||| || |||||||||||||| ||||| |||||||||||||||||||| ||| Sbjct: 15 gatgatgaagacgaggtgcttcttgcaatcgctgaggaattgggtgtgttcattccgtat 74 Query: 84 gttggtggtgtagagcatgctcatgttttgcttccaccattggagacattgtctacggtg 143 |||||||||||||| ||||||||||||||||| ||||| ||||||||||||| ||| ||| Sbjct: 75 gttggtggtgtagaacatgctcatgttttgctcccacctttggagacattgtgtacagtg 134 Query: 144 gaggaaacctgtgtccgagacaaagcagttgagtcgctgtgccgcattggtgcacagatg 203 |||||||| |||||||| || ||||||||||| || |||||||| ||||||||||| ||| Sbjct: 135 gaggaaacttgtgtccgtgataaagcagttgaatctctgtgccgtattggtgcacaaatg 194 Query: 204 aaagaaaacgacattgttgactatttcattccagtagtaaagaggctagcagctggtgag 263 || |||| |||||||| |||| |||||||||||||||||||||||||||||||| ||| Sbjct: 195 aaggaaactgacattgtcgactggttcattccagtagtaaagaggctagcagctggagag 254 Query: 264 tggtttacagctcgagtgtcatcctgtggtcttttccatatagcctatccaagtgccacc 323 |||||||||||||| || || ||||||||||||||||| ||||||||||||||||| | Sbjct: 255 tggtttacagctcgcgtatcgtcctgtggtcttttccacatagcctatccaagtgcgtcg 314 Query: 324 gatccgttgaaaacagaattgaggactatttatggccagttatgccaagatgatatgcct 383 || | ||||||||||||||||||||||| ||||| ||| |||| || ||||| |||||| Sbjct: 315 gaccaattgaaaacagaattgaggactatctatggtcagctatgtcacgatgacatgcct 374 Query: 384 atggtcagaagggcagctgcatcaaatcttgggaagtttgctgccactgtagaacagagc 443 ||||||||||| |||||||||||||||||||| |||||||| || || || ||||||| Sbjct: 375 atggtcagaagagcagctgcatcaaatcttggaaagtttgcagctacagttgaacagaat 434 Query: 444 catttgaagacagaaatcatgtcgatctttgatgatcttacccaagatgatcaagattca 503 ||||||||||||||||| ||||| || ||||||||| | ||||||||||||||||||||| Sbjct: 435 catttgaagacagaaataatgtcaatatttgatgatttaacccaagatgatcaagattca 494 Query: 504 gtacgtttgttggcagttgaaggctgtgccgctcttggaaaattgttagaaccccaagat 563 || ||| ||||||| |||||||||||||| || ||||| |||||||| ||||| |||||| Sbjct: 495 gtgcgtctgttggctgttgaaggctgtgctgcccttggtaaattgttggaaccacaagat 554 Query: 564 tgtgtagcacatatccttcctgtcattgtcaatttctcccaggataaatcttggcgtgt 622 || |||||||| || ||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 555 tgcgtagcacacattcttccagtcattgtcaatttctcccaggataaatcatggcgtgt 613
>gb|AY103751.1| Zea mays PCO067871 mRNA sequence Length = 2061 Score = 642 bits (324), Expect = 0.0 Identities = 537/608 (88%) Strand = Plus / Plus Query: 15 gaaaacaatgatgatgaagatgaagtgcttcttgcaatggctgaagaattgggtgtgttc 74 ||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 218 gaaaacaatgacgatgaagatgaggtgcttcttgcaatggctgaggaattgggtgtgttc 277 Query: 75 attccttatgttggtggtgtagagcatgctcatgttttgcttccaccattggagacattg 134 |||||||||||||| |||||||| ||||||||||| |||||||| || ||||| |||||| Sbjct: 278 attccttatgttgggggtgtagaacatgctcatgtgttgcttccccctttggaaacattg 337 Query: 135 tctacggtggaggaaacctgtgtccgagacaaagcagttgagtcgctgtgccgcattggt 194 | ||| || || ||||| |||||||| || || |||||||| || |||||||| |||||| Sbjct: 338 tgtacagtagaagaaacttgtgtccgtgataaggcagttgaatctctgtgccgtattggt 397 Query: 195 gcacagatgaaagaaaacgacattgttgactatttcattccagtagtaaagaggctagca 254 ||||| ||||| |||| ||||| || |||| ||||||||||||||||||||||||||| Sbjct: 398 gcacaaatgaaggaaactgacatagtcgactggttcattccagtagtaaagaggctagca 457 Query: 255 gctggtgagtggtttacagctcgagtgtcatcctgtggtcttttccatatagcctatcca 314 ||||||||||||||||||||||| || |||||||||||||||||||| |||||||||||| Sbjct: 458 gctggtgagtggtttacagctcgtgtatcatcctgtggtcttttccacatagcctatcca 517 Query: 315 agtgccaccgatccgttgaaaacagaattgaggactatttatggccagttatgccaagat 374 ||||| || | |||||||||||||| |||||||| ||||| |||||||| || ||| Sbjct: 518 agtgcattggaccaattgaaaacagaattaaggactatctatggtcagttatgtcaggat 577 Query: 375 gatatgcctatggtcagaagggcagctgcatcaaatcttgggaagtttgctgccactgta 434 || ||||||||||||||||| || ||||||||||||||||| |||||||| ||||| || Sbjct: 578 gacatgcctatggtcagaagagctgctgcatcaaatcttggaaagtttgcagccacagtt 637 Query: 435 gaacagagccatttgaagacagaaatcatgtcgatctttgatgatcttacccaagatgat 494 ||||||| ||||||||||||||||| ||||| || |||||||| | |||||||||||| Sbjct: 638 gaacagaatcatttgaagacagaaataatgtcaatatttgatgacttaacccaagatgat 697 Query: 495 caagattcagtacgtttgttggcagttgaaggctgtgccgctcttggaaaattgttagaa 554 ||||||||||| ||||||||||| |||||||| ||||| |||||||| |||||||| || Sbjct: 698 caagattcagtgcgtttgttggctgttgaaggttgtgctgctcttggtaaattgttggag 757 Query: 555 ccccaagattgtgtagcacatatccttcctgtcattgtcaatttctcccaggataaatct 614 || |||||||||||||| || || ||||| ||||||||||||||||||||||||||||| Sbjct: 758 ccacaagattgtgtagctcacattcttccagtcattgtcaatttctcccaggataaatca 817 Query: 615 tggcgtgt 622 |||||||| Sbjct: 818 tggcgtgt 825
>dbj|AK059103.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-D03, full insert sequence Length = 1448 Score = 355 bits (179), Expect = 1e-94 Identities = 257/283 (90%) Strand = Plus / Plus Query: 337 cagaattgaggactatttatggccagttatgccaagatgatatgcctatggtcagaaggg 396 ||||||||||||| |||||||| ||| ||||||||||||| |||||||||||| |||||| Sbjct: 7 cagaattgaggaccatttatggtcagctatgccaagatgacatgcctatggtccgaaggg 66 Query: 397 cagctgcatcaaatcttgggaagtttgctgccactgtagaacagagccatttgaagacag 456 ||||||||||||||||||| |||||||| ||||| || ||||||| | || | ||||||| Sbjct: 67 cagctgcatcaaatcttggaaagtttgcagccacagttgaacagaactatctaaagacag 126 Query: 457 aaatcatgtcgatctttgatgatcttacccaagatgatcaagattcagtacgtttgttgg 516 || |||||||||| ||||||||||| |||||||||||||||||||| ||||| ||||||| Sbjct: 127 aagtcatgtcgatatttgatgatctaacccaagatgatcaagattccgtacgcttgttgg 186 Query: 517 cagttgaaggctgtgccgctcttggaaaattgttagaaccccaagattgtgtagcacata 576 |||||||||||||||| |||||||| |||||||| ||||| ||||||||||||||||||| Sbjct: 187 cagttgaaggctgtgctgctcttgggaaattgttggaaccacaagattgtgtagcacata 246 Query: 577 tccttcctgtcattgtcaatttctcccaggataaatcttggcg 619 ||||||| || |||||||||||||||||||| ||||| ||||| Sbjct: 247 tccttccagttattgtcaatttctcccaggacaaatcatggcg 289
>emb|AJ243829.1|OSA243829 Oryza sativa RPA gene for protein phosphatase 2A A subunit, exons 1-12 Length = 6096 Score = 276 bits (139), Expect = 8e-71 Identities = 208/231 (90%) Strand = Plus / Plus Query: 15 gaaaacaatgatgatgaagatgaagtgcttcttgcaatggctgaagaattgggtgtgttc 74 ||||| ||||| ||||||||||| ||||||||||| ||||||||||||||||| |||||| Sbjct: 734 gaaaataatgacgatgaagatgaggtgcttcttgctatggctgaagaattgggcgtgttc 793 Query: 75 attccttatgttggtggtgtagagcatgctcatgttttgcttccaccattggagacattg 134 |||||||| ||||| |||||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 794 attccttacgttgggggtgtagaacatgctcatgttttgctaccaccattggagacattg 853 Query: 135 tctacggtggaggaaacctgtgtccgagacaaagcagttgagtcgctgtgccgcattggt 194 | ||| |||||||||||||||||||||||||| |||||||| || |||||||| ||||| Sbjct: 854 tgtacagtggaggaaacctgtgtccgagacaaggcagttgaatctctgtgccgtattgga 913 Query: 195 gcacagatgaaagaaaacgacattgttgactatttcattccagtagtaaag 245 ||||||||||| |||| |||||||| |||| ||| |||||||||||||| Sbjct: 914 gcacagatgaaggaaagtgacattgtagactggttcgttccagtagtaaag 964 Score = 264 bits (133), Expect = 3e-67 Identities = 220/249 (88%) Strand = Plus / Plus Query: 244 agaggctagcagctggtgagtggtttacagctcgagtgtcatcctgtggtcttttccata 303 ||||||||||||||||||||||||||||||||||||| || || ||||| |||||||||| Sbjct: 1324 agaggctagcagctggtgagtggtttacagctcgagtatcgtcttgtggacttttccata 1383 Query: 304 tagcctatccaagtgccaccgatccgttgaaaacagaattgaggactatttatggccagt 363 |||| ||||||||||| | |||| ||||| ||||||||||||| |||||||| ||| Sbjct: 1384 tagcatatccaagtgctcctgatcaattgaaggcagaattgaggaccatttatggtcagc 1443 Query: 364 tatgccaagatgatatgcctatggtcagaagggcagctgcatcaaatcttgggaagtttg 423 ||||||||||||| |||||||||||| |||||||||||||||||||||| || ||||||| Sbjct: 1444 tatgccaagatgacatgcctatggtccgaagggcagctgcatcaaatctcggaaagtttg 1503 Query: 424 ctgccactgtagaacagagccatttgaagacagaaatcatgtcgatctttgatgatctta 483 | ||||| || ||||||| | || | ||||||||| |||||||||| ||||||||||| | Sbjct: 1504 cagccacagttgaacagaactatctaaagacagaagtcatgtcgatatttgatgatctaa 1563 Query: 484 cccaagatg 492 ||||||||| Sbjct: 1564 cccaagatg 1572 Score = 165 bits (83), Expect = 2e-37 Identities = 107/115 (93%) Strand = Plus / Plus Query: 492 gatcaagattcagtacgtttgttggcagttgaaggctgtgccgctcttggaaaattgtta 551 ||||||||||| ||||| ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 2053 gatcaagattccgtacgcttgttggcagttgaaggctgtgctgctcttgggaaattgttg 2112 Query: 552 gaaccccaagattgtgtagcacatatccttcctgtcattgtcaatttctcccagg 606 ||||| |||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 2113 gaaccacaagattgtgtagcacatatccttccagttattgtcaatttctcccagg 2167
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 276 bits (139), Expect = 8e-71 Identities = 208/231 (90%) Strand = Plus / Minus Query: 15 gaaaacaatgatgatgaagatgaagtgcttcttgcaatggctgaagaattgggtgtgttc 74 ||||| ||||| ||||||||||| ||||||||||| ||||||||||||||||| |||||| Sbjct: 3708889 gaaaataatgacgatgaagatgaggtgcttcttgctatggctgaagaattgggcgtgttc 3708830 Query: 75 attccttatgttggtggtgtagagcatgctcatgttttgcttccaccattggagacattg 134 |||||||| ||||| |||||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 3708829 attccttacgttgggggtgtagaacatgctcatgttttgctaccaccattggagacattg 3708770 Query: 135 tctacggtggaggaaacctgtgtccgagacaaagcagttgagtcgctgtgccgcattggt 194 | ||| |||||||||||||||||||||||||| |||||||| || |||||||| ||||| Sbjct: 3708769 tgtacagtggaggaaacctgtgtccgagacaaggcagttgaatctctgtgccgtattgga 3708710 Query: 195 gcacagatgaaagaaaacgacattgttgactatttcattccagtagtaaag 245 ||||||||||| |||| |||||||| |||| ||| |||||||||||||| Sbjct: 3708709 gcacagatgaaggaaagtgacattgtagactggttcgttccagtagtaaag 3708659 Score = 272 bits (137), Expect = 1e-69 Identities = 221/249 (88%) Strand = Plus / Minus Query: 244 agaggctagcagctggtgagtggtttacagctcgagtgtcatcctgtggtcttttccata 303 ||||||||||||||||||||||||||||||||||||| || || ||||| |||||||||| Sbjct: 3708299 agaggctagcagctggtgagtggtttacagctcgagtatcgtcttgtggacttttccata 3708240 Query: 304 tagcctatccaagtgccaccgatccgttgaaaacagaattgaggactatttatggccagt 363 |||| ||||||||||| | |||| ||||| ||||||||||||| |||||||| ||| Sbjct: 3708239 tagcatatccaagtgctcctgatcaattgaaggcagaattgaggaccatttatggtcagc 3708180 Query: 364 tatgccaagatgatatgcctatggtcagaagggcagctgcatcaaatcttgggaagtttg 423 ||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||| Sbjct: 3708179 tatgccaagatgacatgcctatggtccgaagggcagctgcatcaaatcttggaaagtttg 3708120 Query: 424 ctgccactgtagaacagagccatttgaagacagaaatcatgtcgatctttgatgatctta 483 | ||||| || ||||||| | || | ||||||||| |||||||||| ||||||||||| | Sbjct: 3708119 cagccacagttgaacagaactatctaaagacagaagtcatgtcgatatttgatgatctaa 3708060 Query: 484 cccaagatg 492 ||||||||| Sbjct: 3708059 cccaagatg 3708051 Score = 165 bits (83), Expect = 2e-37 Identities = 107/115 (93%) Strand = Plus / Minus Query: 492 gatcaagattcagtacgtttgttggcagttgaaggctgtgccgctcttggaaaattgtta 551 ||||||||||| ||||| ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 3707569 gatcaagattccgtacgcttgttggcagttgaaggctgtgctgctcttgggaaattgttg 3707510 Query: 552 gaaccccaagattgtgtagcacatatccttcctgtcattgtcaatttctcccagg 606 ||||| |||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 3707509 gaaccacaagattgtgtagcacatatccttccagttattgtcaatttctcccagg 3707455
>dbj|AP005578.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1695_A02 Length = 156214 Score = 276 bits (139), Expect = 8e-71 Identities = 208/231 (90%) Strand = Plus / Minus Query: 15 gaaaacaatgatgatgaagatgaagtgcttcttgcaatggctgaagaattgggtgtgttc 74 ||||| ||||| ||||||||||| ||||||||||| ||||||||||||||||| |||||| Sbjct: 117150 gaaaataatgacgatgaagatgaggtgcttcttgctatggctgaagaattgggcgtgttc 117091 Query: 75 attccttatgttggtggtgtagagcatgctcatgttttgcttccaccattggagacattg 134 |||||||| ||||| |||||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 117090 attccttacgttgggggtgtagaacatgctcatgttttgctaccaccattggagacattg 117031 Query: 135 tctacggtggaggaaacctgtgtccgagacaaagcagttgagtcgctgtgccgcattggt 194 | ||| |||||||||||||||||||||||||| |||||||| || |||||||| ||||| Sbjct: 117030 tgtacagtggaggaaacctgtgtccgagacaaggcagttgaatctctgtgccgtattgga 116971 Query: 195 gcacagatgaaagaaaacgacattgttgactatttcattccagtagtaaag 245 ||||||||||| |||| |||||||| |||| ||| |||||||||||||| Sbjct: 116970 gcacagatgaaggaaagtgacattgtagactggttcgttccagtagtaaag 116920 Score = 272 bits (137), Expect = 1e-69 Identities = 221/249 (88%) Strand = Plus / Minus Query: 244 agaggctagcagctggtgagtggtttacagctcgagtgtcatcctgtggtcttttccata 303 ||||||||||||||||||||||||||||||||||||| || || ||||| |||||||||| Sbjct: 116560 agaggctagcagctggtgagtggtttacagctcgagtatcgtcttgtggacttttccata 116501 Query: 304 tagcctatccaagtgccaccgatccgttgaaaacagaattgaggactatttatggccagt 363 |||| ||||||||||| | |||| ||||| ||||||||||||| |||||||| ||| Sbjct: 116500 tagcatatccaagtgctcctgatcaattgaaggcagaattgaggaccatttatggtcagc 116441 Query: 364 tatgccaagatgatatgcctatggtcagaagggcagctgcatcaaatcttgggaagtttg 423 ||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||| Sbjct: 116440 tatgccaagatgacatgcctatggtccgaagggcagctgcatcaaatcttggaaagtttg 116381 Query: 424 ctgccactgtagaacagagccatttgaagacagaaatcatgtcgatctttgatgatctta 483 | ||||| || ||||||| | || | ||||||||| |||||||||| ||||||||||| | Sbjct: 116380 cagccacagttgaacagaactatctaaagacagaagtcatgtcgatatttgatgatctaa 116321 Query: 484 cccaagatg 492 ||||||||| Sbjct: 116320 cccaagatg 116312 Score = 165 bits (83), Expect = 2e-37 Identities = 107/115 (93%) Strand = Plus / Minus Query: 492 gatcaagattcagtacgtttgttggcagttgaaggctgtgccgctcttggaaaattgtta 551 ||||||||||| ||||| ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 115830 gatcaagattccgtacgcttgttggcagttgaaggctgtgctgctcttgggaaattgttg 115771 Query: 552 gaaccccaagattgtgtagcacatatccttcctgtcattgtcaatttctcccagg 606 ||||| |||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 115770 gaaccacaagattgtgtagcacatatccttccagttattgtcaatttctcccagg 115716
>dbj|AP005553.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1116_H10 Length = 101054 Score = 276 bits (139), Expect = 8e-71 Identities = 208/231 (90%) Strand = Plus / Minus Query: 15 gaaaacaatgatgatgaagatgaagtgcttcttgcaatggctgaagaattgggtgtgttc 74 ||||| ||||| ||||||||||| ||||||||||| ||||||||||||||||| |||||| Sbjct: 16191 gaaaataatgacgatgaagatgaggtgcttcttgctatggctgaagaattgggcgtgttc 16132 Query: 75 attccttatgttggtggtgtagagcatgctcatgttttgcttccaccattggagacattg 134 |||||||| ||||| |||||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 16131 attccttacgttgggggtgtagaacatgctcatgttttgctaccaccattggagacattg 16072 Query: 135 tctacggtggaggaaacctgtgtccgagacaaagcagttgagtcgctgtgccgcattggt 194 | ||| |||||||||||||||||||||||||| |||||||| || |||||||| ||||| Sbjct: 16071 tgtacagtggaggaaacctgtgtccgagacaaggcagttgaatctctgtgccgtattgga 16012 Query: 195 gcacagatgaaagaaaacgacattgttgactatttcattccagtagtaaag 245 ||||||||||| |||| |||||||| |||| ||| |||||||||||||| Sbjct: 16011 gcacagatgaaggaaagtgacattgtagactggttcgttccagtagtaaag 15961 Score = 272 bits (137), Expect = 1e-69 Identities = 221/249 (88%) Strand = Plus / Minus Query: 244 agaggctagcagctggtgagtggtttacagctcgagtgtcatcctgtggtcttttccata 303 ||||||||||||||||||||||||||||||||||||| || || ||||| |||||||||| Sbjct: 15601 agaggctagcagctggtgagtggtttacagctcgagtatcgtcttgtggacttttccata 15542 Query: 304 tagcctatccaagtgccaccgatccgttgaaaacagaattgaggactatttatggccagt 363 |||| ||||||||||| | |||| ||||| ||||||||||||| |||||||| ||| Sbjct: 15541 tagcatatccaagtgctcctgatcaattgaaggcagaattgaggaccatttatggtcagc 15482 Query: 364 tatgccaagatgatatgcctatggtcagaagggcagctgcatcaaatcttgggaagtttg 423 ||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||| Sbjct: 15481 tatgccaagatgacatgcctatggtccgaagggcagctgcatcaaatcttggaaagtttg 15422 Query: 424 ctgccactgtagaacagagccatttgaagacagaaatcatgtcgatctttgatgatctta 483 | ||||| || ||||||| | || | ||||||||| |||||||||| ||||||||||| | Sbjct: 15421 cagccacagttgaacagaactatctaaagacagaagtcatgtcgatatttgatgatctaa 15362 Query: 484 cccaagatg 492 ||||||||| Sbjct: 15361 cccaagatg 15353 Score = 165 bits (83), Expect = 2e-37 Identities = 107/115 (93%) Strand = Plus / Minus Query: 492 gatcaagattcagtacgtttgttggcagttgaaggctgtgccgctcttggaaaattgtta 551 ||||||||||| ||||| ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 14871 gatcaagattccgtacgcttgttggcagttgaaggctgtgctgctcttgggaaattgttg 14812 Query: 552 gaaccccaagattgtgtagcacatatccttcctgtcattgtcaatttctcccagg 606 ||||| |||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 14811 gaaccacaagattgtgtagcacatatccttccagttattgtcaatttctcccagg 14757
>gb|AF196286.1|AF196286 Medicago sativa subsp. x varia Ser/Thr specific protein phosphatase 2A A regulatory subunit alpha isoform mRNA, complete cds Length = 2146 Score = 172 bits (87), Expect = 9e-40 Identities = 219/263 (83%) Strand = Plus / Plus Query: 360 cagttatgccaagatgatatgcctatggtcagaagggcagctgcatcaaatcttgggaag 419 |||||||| || ||||| ||||||||||| ||||| | ||||| |||||||||||||| Sbjct: 678 cagttatgtcaggatgacatgcctatggttagaagatctgctgcgacaaatcttgggaag 737 Query: 420 tttgctgccactgtagaacagagccatttgaagacagaaatcatgtcgatctttgatgat 479 || ||||| ||||| || | | ||||||||| | || |||||||| || ||||| ||| Sbjct: 738 ttcgctgcaactgttgagtatactcatttgaaggctgacatcatgtcaatttttgacgat 797 Query: 480 cttacccaagatgatcaagattcagtacgtttgttggcagttgaaggctgtgccgctctt 539 ||||| ||||||||||||||||| || | |||||||| || || |||||||| |||||| Sbjct: 798 cttactcaagatgatcaagattctgtcagattgttggctgtggagggctgtgctgctctt 857 Query: 540 ggaaaattgttagaaccccaagattgtgtagcacatatccttcctgtcattgtcaatttc 599 |||||| |||| || || ||||||||||| |||||||| || || || || || |||||| Sbjct: 858 ggaaaactgttggagccacaagattgtgttgcacatatactcccagttatagttaatttc 917 Query: 600 tcccaggataaatcttggcgtgt 622 ||||||||||| ||||||||||| Sbjct: 918 tcccaggataagtcttggcgtgt 940 Score = 79.8 bits (40), Expect = 1e-11 Identities = 82/96 (85%) Strand = Plus / Plus Query: 33 gatgaagtgcttcttgcaatggctgaagaattgggtgtgttcattccttatgttggtggt 92 ||||| || |||||||||||||| ||||| ||||| || |||||||||||||||||||| Sbjct: 351 gatgaggtacttcttgcaatggccgaagagttgggagttttcattccttatgttggtgga 410 Query: 93 gtagagcatgctcatgttttgcttccaccattggag 128 || || |||||| ||| ||||| ||||| |||||| Sbjct: 411 gtcgaacatgctagtgtgttgctcccacctttggag 446
>gb|BT016833.1| Zea mays clone Contig666 mRNA sequence Length = 1277 Score = 157 bits (79), Expect = 5e-35 Identities = 118/131 (90%) Strand = Plus / Plus Query: 492 gatcaagattcagtacgtttgttggcagttgaaggctgtgccgctcttggaaaattgtta 551 |||||||||||||| ||||||||||| |||||||| ||||| |||||||| |||||||| Sbjct: 11 gatcaagattcagtgcgtttgttggctgttgaaggttgtgctgctcttggtaaattgttg 70 Query: 552 gaaccccaagattgtgtagcacatatccttcctgtcattgtcaatttctcccaggataaa 611 || || |||||||||||||| || || ||||| ||||||||||||||||||||||||||| Sbjct: 71 gagccacaagattgtgtagctcacattcttccagtcattgtcaatttctcccaggataaa 130 Query: 612 tcttggcgtgt 622 || |||||||| Sbjct: 131 tcatggcgtgt 141
>ref|NM_101203.3| Arabidopsis thaliana PDF2; protein phosphatase type 2A regulator AT1G13320 (PDF2) transcript variant AT1G13320.1 mRNA, complete cds Length = 2033 Score = 141 bits (71), Expect = 3e-30 Identities = 152/179 (84%) Strand = Plus / Plus Query: 444 catttgaagacagaaatcatgtcgatctttgatgatcttacccaagatgatcaagattca 503 |||||||||||||| || ||||| || ||||| |||||||| ||||||||||||||||| Sbjct: 681 catttgaagacagacattatgtccatgtttgaggatcttacgcaagatgatcaagattcg 740 Query: 504 gtacgtttgttggcagttgaaggctgtgccgctcttggaaaattgttagaaccccaagat 563 || | || ||||| ||||| || ||||| |||||||| |||||||| || ||||| || Sbjct: 741 gttagattattggctgttgagggttgtgctgctcttgggaaattgttggagccccaggac 800 Query: 564 tgtgtagcacatatccttcctgtcattgtcaatttctcccaggataaatcttggcgtgt 622 ||||| ||||| || |||||||| |||||||||||||| |||||||| || |||||||| Sbjct: 801 tgtgttgcacacattcttcctgtgattgtcaatttctcgcaggataagtcctggcgtgt 859
>ref|NM_001035958.1| Arabidopsis thaliana PDF2; protein phosphatase type 2A regulator AT1G13320 (PDF2) transcript variant AT1G13320.2 mRNA, complete cds Length = 2073 Score = 141 bits (71), Expect = 3e-30 Identities = 152/179 (84%) Strand = Plus / Plus Query: 444 catttgaagacagaaatcatgtcgatctttgatgatcttacccaagatgatcaagattca 503 |||||||||||||| || ||||| || ||||| |||||||| ||||||||||||||||| Sbjct: 682 catttgaagacagacattatgtccatgtttgaggatcttacgcaagatgatcaagattcg 741 Query: 504 gtacgtttgttggcagttgaaggctgtgccgctcttggaaaattgttagaaccccaagat 563 || | || ||||| ||||| || ||||| |||||||| |||||||| || ||||| || Sbjct: 742 gttagattattggctgttgagggttgtgctgctcttgggaaattgttggagccccaggac 801 Query: 564 tgtgtagcacatatccttcctgtcattgtcaatttctcccaggataaatcttggcgtgt 622 ||||| ||||| || |||||||| |||||||||||||| |||||||| || |||||||| Sbjct: 802 tgtgttgcacacattcttcctgtgattgtcaatttctcgcaggataagtcctggcgtgt 860
>emb|X82003.1|AT65KPDF2 A.thaliana mRNA for 65kDa regulatory subunit of protein phosphatase 2A Length = 1685 Score = 141 bits (71), Expect = 3e-30 Identities = 152/179 (84%) Strand = Plus / Plus Query: 444 catttgaagacagaaatcatgtcgatctttgatgatcttacccaagatgatcaagattca 503 |||||||||||||| || ||||| || ||||| |||||||| ||||||||||||||||| Sbjct: 355 catttgaagacagacattatgtccatgtttgaggatcttacgcaagatgatcaagattcg 414 Query: 504 gtacgtttgttggcagttgaaggctgtgccgctcttggaaaattgttagaaccccaagat 563 || | || ||||| ||||| || ||||| |||||||| |||||||| || ||||| || Sbjct: 415 gttagattattggctgttgagggttgtgctgctcttgggaaattgttggagccccaggac 474 Query: 564 tgtgtagcacatatccttcctgtcattgtcaatttctcccaggataaatcttggcgtgt 622 ||||| ||||| || |||||||| |||||||||||||| |||||||| || |||||||| Sbjct: 475 tgtgttgcacacattcttcctgtgattgtcaatttctcgcaggataagtcctggcgtgt 533
>gb|AY099760.1| Arabidopsis thaliana protein phosphatase 2A regulatory subunit, putative (At1g13320) mRNA, complete cds Length = 1996 Score = 141 bits (71), Expect = 3e-30 Identities = 152/179 (84%) Strand = Plus / Plus Query: 444 catttgaagacagaaatcatgtcgatctttgatgatcttacccaagatgatcaagattca 503 |||||||||||||| || ||||| || ||||| |||||||| ||||||||||||||||| Sbjct: 681 catttgaagacagacattatgtccatgtttgaggatcttacgcaagatgatcaagattcg 740 Query: 504 gtacgtttgttggcagttgaaggctgtgccgctcttggaaaattgttagaaccccaagat 563 || | || ||||| ||||| || ||||| |||||||| |||||||| || ||||| || Sbjct: 741 gttagattattggctgttgagggttgtgctgctcttgggaaattgttggagccccaggac 800 Query: 564 tgtgtagcacatatccttcctgtcattgtcaatttctcccaggataaatcttggcgtgt 622 ||||| ||||| || |||||||| |||||||||||||| |||||||| || |||||||| Sbjct: 801 tgtgttgcacacattcttcctgtgattgtcaatttctcgcaggataagtcctggcgtgt 859
>emb|BX815351.1|CNS0AE48 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS54ZC01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1957 Score = 141 bits (71), Expect = 3e-30 Identities = 152/179 (84%) Strand = Plus / Plus Query: 444 catttgaagacagaaatcatgtcgatctttgatgatcttacccaagatgatcaagattca 503 |||||||||||||| || ||||| || ||||| |||||||| ||||||||||||||||| Sbjct: 654 catttgaagacagacattatgtccatgtttgaggatcttacgcaagatgatcaagattcg 713 Query: 504 gtacgtttgttggcagttgaaggctgtgccgctcttggaaaattgttagaaccccaagat 563 || | || ||||| ||||| || ||||| |||||||| |||||||| || ||||| || Sbjct: 714 gttagattattggctgttgagggttgtgctgctcttgggaaattgttggagccccaggac 773 Query: 564 tgtgtagcacatatccttcctgtcattgtcaatttctcccaggataaatcttggcgtgt 622 ||||| ||||| || |||||||| |||||||||||||| |||||||| || |||||||| Sbjct: 774 tgtgttgcacacattcttcctgtgattgtcaatttctcgcaggataagtcctggcgtgt 832
>gb|BT002601.1| Arabidopsis thaliana protein phosphatase 2A regulatory subunit, putative (At1g13320) mRNA, complete cds Length = 1794 Score = 141 bits (71), Expect = 3e-30 Identities = 152/179 (84%) Strand = Plus / Plus Query: 444 catttgaagacagaaatcatgtcgatctttgatgatcttacccaagatgatcaagattca 503 |||||||||||||| || ||||| || ||||| |||||||| ||||||||||||||||| Sbjct: 592 catttgaagacagacattatgtccatgtttgaggatcttacgcaagatgatcaagattcg 651 Query: 504 gtacgtttgttggcagttgaaggctgtgccgctcttggaaaattgttagaaccccaagat 563 || | || ||||| ||||| || ||||| |||||||| |||||||| || ||||| || Sbjct: 652 gttagattattggctgttgagggttgtgctgctcttgggaaattgttggagccccaggac 711 Query: 564 tgtgtagcacatatccttcctgtcattgtcaatttctcccaggataaatcttggcgtgt 622 ||||| ||||| || |||||||| |||||||||||||| |||||||| || |||||||| Sbjct: 712 tgtgttgcacacattcttcctgtgattgtcaatttctcgcaggataagtcctggcgtgt 770
>ref|NM_113479.2| Arabidopsis thaliana PDF1; protein phosphatase type 2A regulator AT3G25800 (PDF1) transcript variant AT3G25800.1 mRNA, complete cds Length = 2087 Score = 111 bits (56), Expect = 3e-21 Identities = 205/252 (81%), Gaps = 2/252 (0%) Strand = Plus / Plus Query: 372 gatgatatgcctatggtcagaagggcagctgcatcaaatcttgggaagtttgctgccact 431 ||||||||||| ||||| || || || || ||| | ||||||||||| |||||||| || Sbjct: 619 gatgatatgccgatggtaaggagagctgcagcaactaatcttgggaaatttgctgctacg 678 Query: 432 gtagaa-cagagccatttgaagacagaaatcatgtcgatctttgatgatcttacccaaga 490 || ||| ||| || |||||||||| || | ||||| || ||||| |||||||| ||||| Sbjct: 679 gttgaatcagcgc-atttgaagaccgacgttatgtccatgtttgaggatcttactcaaga 737 Query: 491 tgatcaagattcagtacgtttgttggcagttgaaggctgtgccgctcttggaaaattgtt 550 |||||||||||| || | || ||||| ||||| || ||||| |||||||| |||||||| Sbjct: 738 tgatcaagattctgttagattattggccgttgagggttgtgctgctcttgggaaattgtt 797 Query: 551 agaaccccaagattgtgtagcacatatccttcctgtcattgtcaatttctcccaggataa 610 || || || |||||||| ||| || ||||| || ||||| |||||||| |||||||| Sbjct: 798 ggagcctcaggattgtgtccaacacattcttcccgtgattgttaatttctcgcaggataa 857 Query: 611 atcttggcgtgt 622 ||||||||||| Sbjct: 858 gtcttggcgtgt 869 Score = 109 bits (55), Expect = 1e-20 Identities = 100/115 (86%) Strand = Plus / Plus Query: 13 gcgaaaacaatgatgatgaagatgaagtgcttcttgcaatggctgaagaattgggtgtgt 72 ||||||||||||| ||||| ||||| || | | ||||||||||||||||||||||||| Sbjct: 260 gcgaaaacaatgacgatgatgatgaggttttattagcaatggctgaagaattgggtgtgt 319 Query: 73 tcattccttatgttggtggtgtagagcatgctcatgttttgcttccaccattgga 127 | |||||||||||||||||||| ||| |||| |||||| | |||||||| ||||| Sbjct: 320 ttattccttatgttggtggtgttgagtatgcacatgttcttcttccacctttgga 374
>ref|NM_001035692.1| Arabidopsis thaliana PDF1; protein phosphatase type 2A regulator AT3G25800 (PDF1) transcript variant AT3G25800.2 mRNA, complete cds Length = 2099 Score = 111 bits (56), Expect = 3e-21 Identities = 205/252 (81%), Gaps = 2/252 (0%) Strand = Plus / Plus Query: 372 gatgatatgcctatggtcagaagggcagctgcatcaaatcttgggaagtttgctgccact 431 ||||||||||| ||||| || || || || ||| | ||||||||||| |||||||| || Sbjct: 619 gatgatatgccgatggtaaggagagctgcagcaactaatcttgggaaatttgctgctacg 678 Query: 432 gtagaa-cagagccatttgaagacagaaatcatgtcgatctttgatgatcttacccaaga 490 || ||| ||| || |||||||||| || | ||||| || ||||| |||||||| ||||| Sbjct: 679 gttgaatcagcgc-atttgaagaccgacgttatgtccatgtttgaggatcttactcaaga 737 Query: 491 tgatcaagattcagtacgtttgttggcagttgaaggctgtgccgctcttggaaaattgtt 550 |||||||||||| || | || ||||| ||||| || ||||| |||||||| |||||||| Sbjct: 738 tgatcaagattctgttagattattggccgttgagggttgtgctgctcttgggaaattgtt 797 Query: 551 agaaccccaagattgtgtagcacatatccttcctgtcattgtcaatttctcccaggataa 610 || || || |||||||| ||| || ||||| || ||||| |||||||| |||||||| Sbjct: 798 ggagcctcaggattgtgtccaacacattcttcccgtgattgttaatttctcgcaggataa 857 Query: 611 atcttggcgtgt 622 ||||||||||| Sbjct: 858 gtcttggcgtgt 869 Score = 109 bits (55), Expect = 1e-20 Identities = 100/115 (86%) Strand = Plus / Plus Query: 13 gcgaaaacaatgatgatgaagatgaagtgcttcttgcaatggctgaagaattgggtgtgt 72 ||||||||||||| ||||| ||||| || | | ||||||||||||||||||||||||| Sbjct: 260 gcgaaaacaatgacgatgatgatgaggttttattagcaatggctgaagaattgggtgtgt 319 Query: 73 tcattccttatgttggtggtgtagagcatgctcatgttttgcttccaccattgga 127 | |||||||||||||||||||| ||| |||| |||||| | |||||||| ||||| Sbjct: 320 ttattccttatgttggtggtgttgagtatgcacatgttcttcttccacctttgga 374
>emb|X82002.1|AT65KPDF1 A.thaliana mRNA for 65 kDa regulatory subunit of protein phosphatase 2A Length = 1842 Score = 111 bits (56), Expect = 3e-21 Identities = 205/252 (81%), Gaps = 2/252 (0%) Strand = Plus / Plus Query: 372 gatgatatgcctatggtcagaagggcagctgcatcaaatcttgggaagtttgctgccact 431 ||||||||||| ||||| || || || || ||| | ||||||||||| |||||||| || Sbjct: 553 gatgatatgccgatggtaaggagagctgcagcaactaatcttgggaaatttgctgctacg 612 Query: 432 gtagaa-cagagccatttgaagacagaaatcatgtcgatctttgatgatcttacccaaga 490 || ||| ||| || |||||||||| || | ||||| || ||||| |||||||| ||||| Sbjct: 613 gttgaatcagcgc-atttgaagaccgacgttatgtccatgtttgaggatcttactcaaga 671 Query: 491 tgatcaagattcagtacgtttgttggcagttgaaggctgtgccgctcttggaaaattgtt 550 |||||||||||| || | || ||||| ||||| || ||||| |||||||| |||||||| Sbjct: 672 tgatcaagattctgttagattattggccgttgagggttgtgctgctcttgggaaattgtt 731 Query: 551 agaaccccaagattgtgtagcacatatccttcctgtcattgtcaatttctcccaggataa 610 || || || |||||||| ||| || ||||| || ||||| |||||||| |||||||| Sbjct: 732 ggagcctcaggattgtgtccaacacattcttcccgtgattgttaatttctcgcaggataa 791 Query: 611 atcttggcgtgt 622 ||||||||||| Sbjct: 792 gtcttggcgtgt 803 Score = 109 bits (55), Expect = 1e-20 Identities = 100/115 (86%) Strand = Plus / Plus Query: 13 gcgaaaacaatgatgatgaagatgaagtgcttcttgcaatggctgaagaattgggtgtgt 72 ||||||||||||| ||||| ||||| || | | ||||||||||||||||||||||||| Sbjct: 194 gcgaaaacaatgacgatgatgatgaggttttattagcaatggctgaagaattgggtgtgt 253 Query: 73 tcattccttatgttggtggtgtagagcatgctcatgttttgcttccaccattgga 127 | |||||||||||||||||||| ||| |||| |||||| | |||||||| ||||| Sbjct: 254 ttattccttatgttggtggtgttgagtatgcacatgttcttcttccacctttgga 308
>gb|BT008356.1| Arabidopsis thaliana At3g25800 gene, complete cds Length = 1764 Score = 111 bits (56), Expect = 3e-21 Identities = 205/252 (81%), Gaps = 2/252 (0%) Strand = Plus / Plus Query: 372 gatgatatgcctatggtcagaagggcagctgcatcaaatcttgggaagtttgctgccact 431 ||||||||||| ||||| || || || || ||| | ||||||||||| |||||||| || Sbjct: 520 gatgatatgccgatggtaaggagagctgcagcaactaatcttgggaaatttgctgctacg 579 Query: 432 gtagaa-cagagccatttgaagacagaaatcatgtcgatctttgatgatcttacccaaga 490 || ||| ||| || |||||||||| || | ||||| || ||||| |||||||| ||||| Sbjct: 580 gttgaatcagcgc-atttgaagaccgacgttatgtccatgtttgaggatcttactcaaga 638 Query: 491 tgatcaagattcagtacgtttgttggcagttgaaggctgtgccgctcttggaaaattgtt 550 |||||||||||| || | || ||||| ||||| || ||||| |||||||| |||||||| Sbjct: 639 tgatcaagattctgttagattattggccgttgagggttgtgctgctcttgggaaattgtt 698 Query: 551 agaaccccaagattgtgtagcacatatccttcctgtcattgtcaatttctcccaggataa 610 || || || |||||||| ||| || ||||| || ||||| |||||||| |||||||| Sbjct: 699 ggagcctcaggattgtgtccaacacattcttcccgtgattgttaatttctcgcaggataa 758 Query: 611 atcttggcgtgt 622 ||||||||||| Sbjct: 759 gtcttggcgtgt 770 Score = 109 bits (55), Expect = 1e-20 Identities = 100/115 (86%) Strand = Plus / Plus Query: 13 gcgaaaacaatgatgatgaagatgaagtgcttcttgcaatggctgaagaattgggtgtgt 72 ||||||||||||| ||||| ||||| || | | ||||||||||||||||||||||||| Sbjct: 161 gcgaaaacaatgacgatgatgatgaggttttattagcaatggctgaagaattgggtgtgt 220 Query: 73 tcattccttatgttggtggtgtagagcatgctcatgttttgcttccaccattgga 127 | |||||||||||||||||||| ||| |||| |||||| | |||||||| ||||| Sbjct: 221 ttattccttatgttggtggtgttgagtatgcacatgttcttcttccacctttgga 275
>gb|BT002488.1| Arabidopsis thaliana protein phosphatase 2A 65 kDa regulatory subunit (At3g25800) mRNA, complete cds Length = 2061 Score = 111 bits (56), Expect = 3e-21 Identities = 205/252 (81%), Gaps = 2/252 (0%) Strand = Plus / Plus Query: 372 gatgatatgcctatggtcagaagggcagctgcatcaaatcttgggaagtttgctgccact 431 ||||||||||| ||||| || || || || ||| | ||||||||||| |||||||| || Sbjct: 619 gatgatatgccgatggtaaggagagctgcagcaactaatcttgggaaatttgctgctacg 678 Query: 432 gtagaa-cagagccatttgaagacagaaatcatgtcgatctttgatgatcttacccaaga 490 || ||| ||| || |||||||||| || | ||||| || ||||| |||||||| ||||| Sbjct: 679 gttgaatcagcgc-atttgaagaccgacgttatgtccatgtttgaggatcttactcaaga 737 Query: 491 tgatcaagattcagtacgtttgttggcagttgaaggctgtgccgctcttggaaaattgtt 550 |||||||||||| || | || ||||| ||||| || ||||| |||||||| |||||||| Sbjct: 738 tgatcaagattctgttagattattggccgttgagggttgtgctgctcttgggaaattgtt 797 Query: 551 agaaccccaagattgtgtagcacatatccttcctgtcattgtcaatttctcccaggataa 610 || || || |||||||| ||| || ||||| || ||||| |||||||| |||||||| Sbjct: 798 ggagcctcaggattgtgtccaacacattcttcccgtgattgttaatttctcgcaggataa 857 Query: 611 atcttggcgtgt 622 ||||||||||| Sbjct: 858 gtcttggcgtgt 869 Score = 109 bits (55), Expect = 1e-20 Identities = 100/115 (86%) Strand = Plus / Plus Query: 13 gcgaaaacaatgatgatgaagatgaagtgcttcttgcaatggctgaagaattgggtgtgt 72 ||||||||||||| ||||| ||||| || | | ||||||||||||||||||||||||| Sbjct: 260 gcgaaaacaatgacgatgatgatgaggttttattagcaatggctgaagaattgggtgtgt 319 Query: 73 tcattccttatgttggtggtgtagagcatgctcatgttttgcttccaccattgga 127 | |||||||||||||||||||| ||| |||| |||||| | |||||||| ||||| Sbjct: 320 ttattccttatgttggtggtgttgagtatgcacatgttcttcttccacctttgga 374
>dbj|AB028607.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K13N2 Length = 77483 Score = 109 bits (55), Expect = 1e-20 Identities = 100/115 (86%) Strand = Plus / Minus Query: 13 gcgaaaacaatgatgatgaagatgaagtgcttcttgcaatggctgaagaattgggtgtgt 72 ||||||||||||| ||||| ||||| || | | ||||||||||||||||||||||||| Sbjct: 62319 gcgaaaacaatgacgatgatgatgaggttttattagcaatggctgaagaattgggtgtgt 62260 Query: 73 tcattccttatgttggtggtgtagagcatgctcatgttttgcttccaccattgga 127 | |||||||||||||||||||| ||| |||| |||||| | |||||||| ||||| Sbjct: 62259 ttattccttatgttggtggtgttgagtatgcacatgttcttcttccacctttgga 62205 Score = 44.1 bits (22), Expect = 0.55 Identities = 99/122 (81%), Gaps = 2/122 (1%) Strand = Plus / Minus Query: 372 gatgatatgcctatggtcagaagggcagctgcatcaaatcttgggaagtttgctgccact 431 ||||||||||| ||||| || || || || ||| | ||||||||||| |||||||| || Sbjct: 61960 gatgatatgccgatggtaaggagagctgcagcaactaatcttgggaaatttgctgctacg 61901 Query: 432 gtagaa-cagagccatttgaagacagaaatcatgtcgatctttgatgatcttacccaaga 490 || ||| ||| | ||||||||||| || | ||||| || ||||| |||||||| ||||| Sbjct: 61900 gttgaatcagcg-catttgaagaccgacgttatgtccatgtttgaggatcttactcaaga 61842 Query: 491 tg 492 || Sbjct: 61841 tg 61840
>emb|X97913.1|NTPP2A N.tabacum mRNA for protein phosphatase 2A, 65kD regulatory subunit Length = 2153 Score = 105 bits (53), Expect = 2e-19 Identities = 125/149 (83%) Strand = Plus / Plus Query: 471 tttgatgatcttacccaagatgatcaagattcagtacgtttgttggcagttgaaggctgt 530 |||||||||||||| || |||||||| ||||| ||||| || || || ||||| |||||| Sbjct: 723 tttgatgatcttacacaggatgatcaggattctgtacgcttattagctgttgagggctgt 782 Query: 531 gccgctcttggaaaattgttagaaccccaagattgtgtagcacatatccttcctgtcatt 590 || || ||||| || |||| || ||||| |||||||| ||||| ||||| ||||||||| Sbjct: 783 gctgcacttggcaagctgttggagccccaggattgtgttgcacacatcctgcctgtcatt 842 Query: 591 gtcaatttctcccaggataaatcttggcg 619 ||||| ||||| ||||| || |||||||| Sbjct: 843 gtcaacttctctcaggacaagtcttggcg 871 Score = 85.7 bits (43), Expect = 2e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 48 gcaatggctgaagaattgggtgtgttcattccttatgttggtggtgtagagcatgctcat 107 |||||||||||||| | |||||||| || ||||||||||| |||||||||||||||||| Sbjct: 300 gcaatggctgaagagcttggtgtgtttatcccttatgttggaggtgtagagcatgctcat 359 Query: 108 gttttgcttccaccattggagac 130 || ||||| || || |||||||| Sbjct: 360 gtcttgctccccccgttggagac 382 Score = 44.1 bits (22), Expect = 0.55 Identities = 34/38 (89%) Strand = Plus / Plus Query: 243 aagaggctagcagctggtgagtggtttacagctcgagt 280 |||||||| ||||||||||| ||||| |||||| |||| Sbjct: 495 aagaggctggcagctggtgaatggttcacagctagagt 532
>emb|AJ131045.1|CAR131045 Cicer arietinum mRNA for protein phosphatase Length = 1776 Score = 97.6 bits (49), Expect = 4e-17 Identities = 124/149 (83%) Strand = Plus / Plus Query: 471 tttgatgatcttacccaagatgatcaagattcagtacgtttgttggcagttgaaggctgt 530 ||||||||||| || || |||||||||||||| || || | | || ||||| || ||| Sbjct: 473 tttgatgatctcacacaggatgatcaagattctgttcggcttcttgctgttgagggttgt 532 Query: 531 gccgctcttggaaaattgttagaaccccaagattgtgtagcacatatccttcctgtcatt 590 || ||||||||||||||||| || || ||||||||||| |||||||| |||||||| || Sbjct: 533 gcagctcttggaaaattgttggagcctcaagattgtgtggcacatattcttcctgttata 592 Query: 591 gtcaatttctcccaggataaatcttggcg 619 |||||||| || |||||||| || ||||| Sbjct: 593 gtcaatttttctcaggataagtcatggcg 621 Score = 89.7 bits (45), Expect = 1e-14 Identities = 138/169 (81%) Strand = Plus / Plus Query: 13 gcgaaaacaatgatgatgaagatgaagtgcttcttgcaatggctgaagaattgggtgtgt 72 |||| ||||| |||||||| ||||| ||||||||||||| || || ||||| || || | Sbjct: 15 gcgagaacaacgatgatgatgatgaggtgcttcttgcaaccgcagaggaattaggggttt 74 Query: 73 tcattccttatgttggtggtgtagagcatgctcatgttttgcttccaccattggagacat 132 || ||||||||||||||||||| ||| ||||| ||||||||||| || ||||| || Sbjct: 75 tcgttccttatgttggtggtgttgagtatgctagcgttttgcttccgcctttggaaactc 134 Query: 133 tgtctacggtggaggaaacctgtgtccgagacaaagcagttgagtcgct 181 ||| ||| || |||||||| ||||| | || ||| ||||||||||||| Sbjct: 135 tgtgtaccgttgaggaaacttgtgttagggataaatcagttgagtcgct 183
>gb|AF196287.1|AF196287 Medicago sativa subsp. x varia Ser/Thr specific protein phosphatase 2A A regulatory subunit beta isoform mRNA, complete cds Length = 2163 Score = 95.6 bits (48), Expect = 2e-16 Identities = 126/152 (82%) Strand = Plus / Plus Query: 471 tttgatgatcttacccaagatgatcaagattcagtacgtttgttggcagttgaaggctgt 530 ||||||||||| || || |||||||||||||| || ||| | | || ||||| || ||| Sbjct: 786 tttgatgatctcacacaggatgatcaagattctgttcgtcttcttgctgttgagggttgt 845 Query: 531 gccgctcttggaaaattgttagaaccccaagattgtgtagcacatatccttcctgtcatt 590 || ||||||||||||||||| || || ||||||||||| |||||||| |||||||| || Sbjct: 846 gcagctcttggaaaattgttggagcctcaagattgtgtggcacatattcttcctgttata 905 Query: 591 gtcaatttctcccaggataaatcttggcgtgt 622 || || || || |||||||| || |||||||| Sbjct: 906 gttaacttttctcaggataagtcctggcgtgt 937 Score = 61.9 bits (31), Expect = 2e-06 Identities = 130/163 (79%) Strand = Plus / Plus Query: 226 atttcattccagtagtaaagaggctagcagctggtgagtggtttacagctcgagtgtcat 285 |||||||||| | || |||||||| || ||||||||||||| ||||| || || || | Sbjct: 541 atttcattcctttggttaagaggctggcttctggtgagtggttcacagcccgggtttctt 600 Query: 286 cctgtggtcttttccatatagcctatccaagtgccaccgatccgttgaaaacagaattga 345 | ||||| | || ||||| ||||| || ||||| | || |||||||||| ||| ||| Sbjct: 601 catgtggcttgtttcatattgcctaccctagtgcaccggaggcgttgaaaactgaactga 660 Query: 346 ggactatttatggccagttatgccaagatgatatgcctatggt 388 || | || ||||| ||| | ||||||||||||||||||||||| Sbjct: 661 gggccatatatgggcagctgtgccaagatgatatgcctatggt 703 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 81 tatgttggtggtgtagagcatgctcatgttttgcttccaccattggagac 130 |||||||||||||| || |||||| |||||||||||| || |||||||| Sbjct: 396 tatgttggtggtgttgatcatgctagtgttttgcttccgccgttggagac 445
>emb|Z25888.1|PSPP2A65K P.sativum mRNA For phosphoprotein phosphatase 2A 65 kDa regulatory subunit Length = 1367 Score = 89.7 bits (45), Expect = 1e-14 Identities = 123/149 (82%) Strand = Plus / Plus Query: 474 gatgatcttacccaagatgatcaagattcagtacgtttgttggcagttgaaggctgtgcc 533 |||||||| || || |||||||||||||| | || || | || ||||| || ||||| Sbjct: 43 gatgatctcacacaggatgatcaagattcttttcggtttcttgctgttgagggttgtgca 102 Query: 534 gctcttggaaaattgttagaaccccaagattgtgtagcacatatccttcctgtcattgtc 593 ||||||||||||||||| || || ||||||||| | |||||||| |||||||| || ||| Sbjct: 103 gctcttggaaaattgttggagcctcaagattgtttggcacatattcttcctgttatagtc 162 Query: 594 aatttctcccaggataaatcttggcgtgt 622 ||||| || |||||||| || |||||||| Sbjct: 163 aatttttctcaggataagtcatggcgtgt 191
>ref|NM_102360.2| Arabidopsis thaliana RCN1 (ROOTS CURL IN NPA); protein phosphatase type 2A regulator AT1G25490 (RCN1) mRNA, complete cds Length = 2086 Score = 87.7 bits (44), Expect = 4e-14 Identities = 119/144 (82%) Strand = Plus / Plus Query: 474 gatgatcttacccaagatgatcaagattcagtacgtttgttggcagttgaaggctgtgcc 533 ||||||||||| ||||||| |||||||| || | | ||||| |||||||| ||||| Sbjct: 739 gatgatcttactaaagatgaccaagattctgtgagactattggctgttgaagggtgtgca 798 Query: 534 gctcttggaaaattgttagaaccccaagattgtgtagcacatatccttcctgtcattgtc 593 ||||||||||| ||||| ||||| || |||||||| |||| || | ||||| ||||| Sbjct: 799 gctcttggaaagttgttggaacctcaggattgtgttgcacgcattttacctgttattgtt 858 Query: 594 aatttctcccaggataaatcttgg 617 |||||||| ||||||||||||||| Sbjct: 859 aatttctctcaggataaatcttgg 882 Score = 50.1 bits (25), Expect = 0.009 Identities = 61/73 (83%) Strand = Plus / Plus Query: 353 ttatggccagttatgccaagatgatatgcctatggtcagaagggcagctgcatcaaatct 412 |||| ||||||| ||| ||||||||||||| ||||| |||| || |||||||| || || Sbjct: 618 ttatagccagttgtgcaaagatgatatgccaatggtgcgaagagctgctgcatctaacct 677 Query: 413 tgggaagtttgct 425 ||||| |||||| Sbjct: 678 ggggaaatttgct 690 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Plus Query: 27 gatgaagatgaagtgcttcttgcaatggctga 58 ||||| ||||| |||||||||||||||||||| Sbjct: 292 gatgacgatgaggtgcttcttgcaatggctga 323
>gb|BT000108.1| Arabidopsis thaliana phosphoprotein phosphatase 2A regulatory subunit A (At1g25490) mRNA, complete cds Length = 1861 Score = 87.7 bits (44), Expect = 4e-14 Identities = 119/144 (82%) Strand = Plus / Plus Query: 474 gatgatcttacccaagatgatcaagattcagtacgtttgttggcagttgaaggctgtgcc 533 ||||||||||| ||||||| |||||||| || | | ||||| |||||||| ||||| Sbjct: 622 gatgatcttactaaagatgaccaagattctgtgagactattggctgttgaagggtgtgca 681 Query: 534 gctcttggaaaattgttagaaccccaagattgtgtagcacatatccttcctgtcattgtc 593 ||||||||||| ||||| ||||| || |||||||| |||| || | ||||| ||||| Sbjct: 682 gctcttggaaagttgttggaacctcaggattgtgttgcacgcattttacctgttattgtt 741 Query: 594 aatttctcccaggataaatcttgg 617 |||||||| ||||||||||||||| Sbjct: 742 aatttctctcaggataaatcttgg 765 Score = 50.1 bits (25), Expect = 0.009 Identities = 61/73 (83%) Strand = Plus / Plus Query: 353 ttatggccagttatgccaagatgatatgcctatggtcagaagggcagctgcatcaaatct 412 |||| ||||||| ||| ||||||||||||| ||||| |||| || |||||||| || || Sbjct: 501 ttatagccagttgtgcaaagatgatatgccaatggtgcgaagagctgctgcatctaacct 560 Query: 413 tgggaagtttgct 425 ||||| |||||| Sbjct: 561 ggggaaatttgct 573 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Plus Query: 27 gatgaagatgaagtgcttcttgcaatggctga 58 ||||| ||||| |||||||||||||||||||| Sbjct: 175 gatgacgatgaggtgcttcttgcaatggctga 206
>gb|AY120757.1| Arabidopsis thaliana phosphoprotein phosphatase 2A regulatory subunit A (At1g25490) mRNA, complete cds Length = 2035 Score = 87.7 bits (44), Expect = 4e-14 Identities = 119/144 (82%) Strand = Plus / Plus Query: 474 gatgatcttacccaagatgatcaagattcagtacgtttgttggcagttgaaggctgtgcc 533 ||||||||||| ||||||| |||||||| || | | ||||| |||||||| ||||| Sbjct: 739 gatgatcttactaaagatgaccaagattctgtgagactattggctgttgaagggtgtgca 798 Query: 534 gctcttggaaaattgttagaaccccaagattgtgtagcacatatccttcctgtcattgtc 593 ||||||||||| ||||| ||||| || |||||||| |||| || | ||||| ||||| Sbjct: 799 gctcttggaaagttgttggaacctcaggattgtgttgcacgcattttacctgttattgtt 858 Query: 594 aatttctcccaggataaatcttgg 617 |||||||| ||||||||||||||| Sbjct: 859 aatttctctcaggataaatcttgg 882 Score = 50.1 bits (25), Expect = 0.009 Identities = 61/73 (83%) Strand = Plus / Plus Query: 353 ttatggccagttatgccaagatgatatgcctatggtcagaagggcagctgcatcaaatct 412 |||| ||||||| ||| ||||||||||||| ||||| |||| || |||||||| || || Sbjct: 618 ttatagccagttgtgcaaagatgatatgccaatggtgcgaagagctgctgcatctaacct 677 Query: 413 tgggaagtttgct 425 ||||| |||||| Sbjct: 678 ggggaaatttgct 690 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Plus Query: 27 gatgaagatgaagtgcttcttgcaatggctga 58 ||||| ||||| |||||||||||||||||||| Sbjct: 292 gatgacgatgaggtgcttcttgcaatggctga 323
>gb|U21557.1|ATU21557 Arabidopsis thaliana phosphoprotein phosphatase 2A regulatory subunit A (RCN1) mRNA, complete cds Length = 1993 Score = 87.7 bits (44), Expect = 4e-14 Identities = 119/144 (82%) Strand = Plus / Plus Query: 474 gatgatcttacccaagatgatcaagattcagtacgtttgttggcagttgaaggctgtgcc 533 ||||||||||| ||||||| |||||||| || | | ||||| |||||||| ||||| Sbjct: 700 gatgatcttactaaagatgaccaagattctgtgagactattggctgttgaagggtgtgca 759 Query: 534 gctcttggaaaattgttagaaccccaagattgtgtagcacatatccttcctgtcattgtc 593 ||||||||||| ||||| ||||| || |||||||| |||| || | ||||| ||||| Sbjct: 760 gctcttggaaagttgttggaacctcaggattgtgttgcacgcattttacctgttattgtt 819 Query: 594 aatttctcccaggataaatcttgg 617 |||||||| ||||||||||||||| Sbjct: 820 aatttctctcaggataaatcttgg 843 Score = 50.1 bits (25), Expect = 0.009 Identities = 61/73 (83%) Strand = Plus / Plus Query: 353 ttatggccagttatgccaagatgatatgcctatggtcagaagggcagctgcatcaaatct 412 |||| ||||||| ||| ||||||||||||| ||||| |||| || |||||||| || || Sbjct: 579 ttatagccagttgtgcaaagatgatatgccaatggtgcgaagagctgctgcatctaacct 638 Query: 413 tgggaagtttgct 425 ||||| |||||| Sbjct: 639 ggggaaatttgct 651 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Plus Query: 27 gatgaagatgaagtgcttcttgcaatggctga 58 ||||| ||||| |||||||||||||||||||| Sbjct: 253 gatgacgatgaggtgcttcttgcaatggctga 284
>gb|U27299.1|ATU27299 Arabidopsis thaliana serine/threonine protein phosphatase type 2A regulatory subunit A mRNA, complete cds Length = 2020 Score = 87.7 bits (44), Expect = 4e-14 Identities = 119/144 (82%) Strand = Plus / Plus Query: 474 gatgatcttacccaagatgatcaagattcagtacgtttgttggcagttgaaggctgtgcc 533 ||||||||||| ||||||| |||||||| || | | ||||| |||||||| ||||| Sbjct: 716 gatgatcttactaaagatgaccaagattctgtgagactattggctgttgaagggtgtgca 775 Query: 534 gctcttggaaaattgttagaaccccaagattgtgtagcacatatccttcctgtcattgtc 593 ||||||||||| ||||| ||||| || |||||||| |||| || | ||||| ||||| Sbjct: 776 gctcttggaaagttgttggaacctcaggattgtgttgcacgcattttacctgttattgtt 835 Query: 594 aatttctcccaggataaatcttgg 617 |||||||| ||||||||||||||| Sbjct: 836 aatttctctcaggataaatcttgg 859 Score = 50.1 bits (25), Expect = 0.009 Identities = 61/73 (83%) Strand = Plus / Plus Query: 353 ttatggccagttatgccaagatgatatgcctatggtcagaagggcagctgcatcaaatct 412 |||| ||||||| ||| ||||||||||||| ||||| |||| || |||||||| || || Sbjct: 595 ttatagccagttgtgcaaagatgatatgccaatggtgcgaagagctgctgcatctaacct 654 Query: 413 tgggaagtttgct 425 ||||| |||||| Sbjct: 655 ggggaaatttgct 667 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Plus Query: 27 gatgaagatgaagtgcttcttgcaatggctga 58 ||||| ||||| |||||||||||||||||||| Sbjct: 269 gatgacgatgaggtgcttcttgcaatggctga 300
>dbj|AP006422.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT33E11, TM0310b, complete sequence Length = 93261 Score = 87.7 bits (44), Expect = 4e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 519 gttgaaggctgtgccgctcttggaaaattgttagaaccccaagattgtgtagcacatatc 578 ||||| || ||||| ||||||||||||||||| || || ||||| |||||||||||||| Sbjct: 71760 gttgagggttgtgcagctcttggaaaattgttggagcctcaagaatgtgtagcacatatt 71819 Query: 579 cttcctgtcattgtcaattt 598 ||||||||||| |||||||| Sbjct: 71820 cttcctgtcatagtcaattt 71839
>gb|DQ323045.1| Phaseolus vulgaris clone BAC-71F18, complete sequence Length = 157468 Score = 79.8 bits (40), Expect = 1e-11 Identities = 70/80 (87%) Strand = Plus / Plus Query: 519 gttgaaggctgtgccgctcttggaaaattgttagaaccccaagattgtgtagcacatatc 578 ||||| || ||||| ||||| ||||||||||| ||||| || |||||||| |||||||| Sbjct: 141105 gttgagggttgtgcagctctaggaaaattgttggaacctcaggattgtgtggcacatatt 141164 Query: 579 cttcctgtcattgtcaattt 598 ||||||||||| |||||||| Sbjct: 141165 cttcctgtcatagtcaattt 141184 Score = 60.0 bits (30), Expect = 9e-06 Identities = 150/190 (78%) Strand = Plus / Plus Query: 244 agaggctagcagctggtgagtggtttacagctcgagtgtcatcctgtggtcttttccata 303 |||||||||| || ||||||||||| ||||| ||||| ||||| || ||| | ||||||| Sbjct: 140020 agaggctagctgccggtgagtggttcacagcacgagtttcatcgtgcggtttgttccata 140079 Query: 304 tagcctatccaagtgccaccgatccgttgaaaacagaattgaggactatttatggccagt 363 | || || || ||||| | || | |||| || ||| |||| | || ||||||||| Sbjct: 140080 ttgcttaccctagtgcgccggaggtggtgaagactgaactgagagccatatatggccagc 140139 Query: 364 tatgccaagatgatatgcctatggtcagaagggcagctgcatcaaatcttgggaagtttg 423 |||| |||||||||||||| ||||| || || | ||||| |||| | |||||||||| Sbjct: 140140 tatgtcaagatgatatgcccatggttaggagatctgctgccacaaacttggggaagtttg 140199 Query: 424 ctgccactgt 433 |||||||||| Sbjct: 140200 ctgccactgt 140209 Score = 54.0 bits (27), Expect = 6e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 13 gcgaaaacaatgatgatgaagatgaagtgcttcttgcaatggctgaagaattgggtgtgt 72 |||| ||||| || ||||| |||||||||||||| |||||||| || || ||||| || | Sbjct: 139492 gcgagaacaacgacgatgacgatgaagtgcttctcgcaatggccgaggagttgggcgttt 139551 Query: 73 tcattcc 79 ||||||| Sbjct: 139552 tcattcc 139558
>gb|AC011810.8|AC011810 Arabidopsis thaliana chromosome I BAC T6J4 genomic sequence, complete sequence Length = 103157 Score = 77.8 bits (39), Expect = 4e-11 Identities = 96/115 (83%) Strand = Plus / Minus Query: 492 gatcaagattcagtacgtttgttggcagttgaaggctgtgccgctcttggaaaattgtta 551 ||||||||||| || | || ||||| ||||| || ||||| |||||||| |||||||| Sbjct: 44215 gatcaagattcggttagattattggctgttgagggttgtgctgctcttgggaaattgttg 44156 Query: 552 gaaccccaagattgtgtagcacatatccttcctgtcattgtcaatttctcccagg 606 || ||||| || ||||| ||||| || |||||||| |||||||||||||| |||| Sbjct: 44155 gagccccaggactgtgttgcacacattcttcctgtgattgtcaatttctcgcagg 44101 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Minus Query: 444 catttgaagacagaaatcatgtcgatctttgatgatcttacccaagatg 492 |||||||||||||| || ||||| || ||||| |||||||| ||||||| Sbjct: 44495 catttgaagacagacattatgtccatgtttgaggatcttacgcaagatg 44447
>emb|X82001.1|AT65KRP2A A.thaliana gene for 65 kDa regulatory subunit of protein phosphatase 2A Length = 4705 Score = 60.0 bits (30), Expect = 9e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 513 ttggcagttgaaggctgtgccgctcttggaaaattgttagaaccccaagattgtgtagca 572 ||||| |||||||| ||||| ||||||||||| ||||| ||||| || |||||||| ||| Sbjct: 1408 ttggctgttgaagggtgtgcagctcttggaaagttgttggaacctcaggattgtgttgca 1467 Query: 573 catatccttcctgtcattgtcaatttctcccagg 606 | || | ||||| ||||| |||||||| |||| Sbjct: 1468 cgcattttacctgttattgttaatttctctcagg 1501 Score = 50.1 bits (25), Expect = 0.009 Identities = 61/73 (83%) Strand = Plus / Plus Query: 353 ttatggccagttatgccaagatgatatgcctatggtcagaagggcagctgcatcaaatct 412 |||| ||||||| ||| ||||||||||||| ||||| |||| || |||||||| || || Sbjct: 1052 ttatagccagttgtgcaaagatgatatgccaatggtgcgaagagctgctgcatctaacct 1111 Query: 413 tgggaagtttgct 425 ||||| |||||| Sbjct: 1112 ggggaaatttgct 1124 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Plus Query: 27 gatgaagatgaagtgcttcttgcaatggctga 58 ||||| ||||| |||||||||||||||||||| Sbjct: 632 gatgacgatgaggtgcttcttgcaatggctga 663
>gb|AC079281.4|AC079281 Arabidopsis thaliana chromosome 1 BAC F2J7 genomic sequence, complete sequence Length = 102540 Score = 60.0 bits (30), Expect = 9e-06 Identities = 78/94 (82%) Strand = Plus / Minus Query: 513 ttggcagttgaaggctgtgccgctcttggaaaattgttagaaccccaagattgtgtagca 572 ||||| |||||||| ||||| ||||||||||| ||||| ||||| || |||||||| ||| Sbjct: 48604 ttggctgttgaagggtgtgcagctcttggaaagttgttggaacctcaggattgtgttgca 48545 Query: 573 catatccttcctgtcattgtcaatttctcccagg 606 | || | ||||| ||||| |||||||| |||| Sbjct: 48544 cgcattttacctgttattgttaatttctctcagg 48511 Score = 50.1 bits (25), Expect = 0.009 Identities = 61/73 (83%) Strand = Plus / Minus Query: 353 ttatggccagttatgccaagatgatatgcctatggtcagaagggcagctgcatcaaatct 412 |||| ||||||| ||| ||||||||||||| ||||| |||| || |||||||| || || Sbjct: 48960 ttatagccagttgtgcaaagatgatatgccaatggtgcgaagagctgctgcatctaacct 48901 Query: 413 tgggaagtttgct 425 ||||| |||||| Sbjct: 48900 ggggaaatttgct 48888 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Minus Query: 27 gatgaagatgaagtgcttcttgcaatggctga 58 ||||| ||||| |||||||||||||||||||| Sbjct: 49380 gatgacgatgaggtgcttcttgcaatggctga 49349
>gb|AC114729.4| Homo sapiens BAC clone RP13-916J2 from 2, complete sequence Length = 46894 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Plus Query: 399 gctgcatcaaatcttgggaagttt 422 |||||||||||||||||||||||| Sbjct: 32699 gctgcatcaaatcttgggaagttt 32722
>gb|BC090060.1| Homo sapiens cDNA clone IMAGE:6568950, **** WARNING: chimeric clone **** Length = 5243 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1 ttcggcacgagggcgaaaacaatgatg 27 |||||||||||||||||||||| |||| Sbjct: 3343 ttcggcacgagggcgaaaacaaagatg 3369
>gb|BC064863.1| Xenopus tropicalis hypothetical protein MGC76072, mRNA (cDNA clone MGC:76072 IMAGE:5307699), complete cds Length = 2330 Score = 44.1 bits (22), Expect = 0.55 Identities = 31/34 (91%) Strand = Plus / Plus Query: 25 atgatgaagatgaagtgcttcttgcaatggctga 58 |||||||||||||||| |||||||| ||||||| Sbjct: 190 atgatgaagatgaagttcttcttgctttggctga 223
>ref|NM_204074.1| Xenopus tropicalis hypothetical protein MGC76072 (MGC76072), mRNA Length = 2330 Score = 44.1 bits (22), Expect = 0.55 Identities = 31/34 (91%) Strand = Plus / Plus Query: 25 atgatgaagatgaagtgcttcttgcaatggctga 58 |||||||||||||||| |||||||| ||||||| Sbjct: 190 atgatgaagatgaagttcttcttgctttggctga 223
>emb|AL672179.9| Mouse DNA sequence from clone RP23-468C6 on chromosome X, complete sequence Length = 181910 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 35 tgaagtgcttcttgcaatggct 56 |||||||||||||||||||||| Sbjct: 97483 tgaagtgcttcttgcaatggct 97504
>emb|CR848503.2| Xenopus tropicalis finished cDNA, clone TEgg059c21 Length = 2334 Score = 44.1 bits (22), Expect = 0.55 Identities = 31/34 (91%) Strand = Plus / Plus Query: 25 atgatgaagatgaagtgcttcttgcaatggctga 58 |||||||||||||||| |||||||| ||||||| Sbjct: 258 atgatgaagatgaagttcttcttgctttggctga 291
>ref|NM_191070.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1626 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 acaatgatgatgaagatgaag 39 ||||||||||||||||||||| Sbjct: 1574 acaatgatgatgaagatgaag 1594
>gb|AC110903.25| Mus musculus chromosome 7, clone RP24-174G2, complete sequence Length = 181076 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 acaatgatgatgaagatgaag 39 ||||||||||||||||||||| Sbjct: 46092 acaatgatgatgaagatgaag 46112
>ref|XM_844383.1| PREDICTED: Canis familiaris hypothetical protein LOC607626 (LOC607626), mRNA Length = 997 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 20 caatgatgatgaagatgaagt 40 ||||||||||||||||||||| Sbjct: 724 caatgatgatgaagatgaagt 744
>ref|XM_721911.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY06370) partial mRNA Length = 2316 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 gaaaacaatgatgatgaagatgaag 39 ||||||| ||||||||||||||||| Sbjct: 1027 gaaaacagtgatgatgaagatgaag 1051
>gb|AC093141.2| Felis catus clone RP86-512F4, complete sequence Length = 119353 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 300 catatagcctatccaagtgcc 320 ||||||||||||||||||||| Sbjct: 77261 catatagcctatccaagtgcc 77281
>emb|AL034407.1|HS657J8 Human DNA sequence from clone RP4-657J8 on chromosome Xq26.1-26.3, complete sequence Length = 98954 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 446 tttgaagacagaaatcatgtc 466 ||||||||||||||||||||| Sbjct: 4246 tttgaagacagaaatcatgtc 4266
>emb|CR378664.1| Photobacterium profundum SS9; segment 2/12 Length = 347994 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 457 aaatcatgtcgatctttgatgatct 481 ||||||||||||||| ||||||||| Sbjct: 220716 aaatcatgtcgatctctgatgatct 220740
>emb|CR860555.1| Pongo pygmaeus mRNA; cDNA DKFZp459L047 (from clone DKFZp459L047) Length = 3694 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 20 caatgatgatgaagatgaagt 40 ||||||||||||||||||||| Sbjct: 779 caatgatgatgaagatgaagt 799
>ref|NM_205139.1| Gallus gallus SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 (SMARCA2), mRNA Length = 4707 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 9 gagggcgaaaacaatgatgatgaagatga 37 |||| ||||| |||||||||||||||||| Sbjct: 4471 gaggacgaaagcaatgatgatgaagatga 4499
>gb|AC018529.12| Homo sapiens, clone RP11-4B16, complete sequence Length = 185590 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 46 ttgcaatggctgaagaattgg 66 ||||||||||||||||||||| Sbjct: 11482 ttgcaatggctgaagaattgg 11462
>dbj|AP003570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0432B10 Length = 131918 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 acaatgatgatgaagatgaag 39 ||||||||||||||||||||| Sbjct: 114150 acaatgatgatgaagatgaag 114170
>gb|AC087711.5| Homo sapiens chromosome 8, clone RP11-172M18, complete sequence Length = 145905 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 aaaacaatgatgatgaagatg 36 ||||||||||||||||||||| Sbjct: 95822 aaaacaatgatgatgaagatg 95842
>gb|AC008561.5| Homo sapiens chromosome 5 clone CTC-535A4, complete sequence Length = 93641 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 477 gatcttacccaagatgatcaa 497 ||||||||||||||||||||| Sbjct: 83031 gatcttacccaagatgatcaa 83051
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 acaatgatgatgaagatgaag 39 ||||||||||||||||||||| Sbjct: 34616856 acaatgatgatgaagatgaag 34616876 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 atgaaagaaaacgacattgt 220 |||||||||||||||||||| Sbjct: 32985136 atgaaagaaaacgacattgt 32985117
>dbj|AP004331.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0085D07 Length = 172483 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 acaatgatgatgaagatgaag 39 ||||||||||||||||||||| Sbjct: 68873 acaatgatgatgaagatgaag 68893
>gb|AC063926.36| Homo sapiens 12 BAC RP11-117L5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 192774 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 280 tgtcatcctgtggtcttttcc 300 ||||||||||||||||||||| Sbjct: 58529 tgtcatcctgtggtcttttcc 58549
>gb|AC093330.25| Homo sapiens chromosome 18, clone RP11-862L9, complete sequence Length = 198182 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 46 ttgcaatggctgaagaattgg 66 ||||||||||||||||||||| Sbjct: 147917 ttgcaatggctgaagaattgg 147897
>gb|AC008961.7| Homo sapiens chromosome 5 clone CTD-2354P9, complete sequence Length = 140200 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 477 gatcttacccaagatgatcaa 497 ||||||||||||||||||||| Sbjct: 124903 gatcttacccaagatgatcaa 124883
>emb|X91638.1|GGBRMPROT G.gallus mRNA for BRM protein Length = 4707 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 9 gagggcgaaaacaatgatgatgaagatga 37 |||| ||||| |||||||||||||||||| Sbjct: 4471 gaggacgaaagcaatgatgatgaagatga 4499
>emb|AJ244052.1|YMO244052 Yam mosaic virus partial RNA for coat protein, isolate BFC56 Length = 1144 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 486 caagatgatcaagattcagta 506 ||||||||||||||||||||| Sbjct: 388 caagatgatcaagattcagta 368
>dbj|AK073886.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075O06, full insert sequence Length = 1895 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 acaatgatgatgaagatgaag 39 ||||||||||||||||||||| Sbjct: 1589 acaatgatgatgaagatgaag 1609
>gb|U53440.1|YMU53440 Yam mosaic virus BF60 polyprotein (NIb protein and coat protein) gene, partial cds Length = 1343 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 486 caagatgatcaagattcagta 506 ||||||||||||||||||||| Sbjct: 1207 caagatgatcaagattcagta 1187
>gb|U53439.1|YMU53439 Yam mosaic virus BF56 polyprotein (NIb protein and coat protein) gene, partial cds Length = 1343 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 486 caagatgatcaagattcagta 506 ||||||||||||||||||||| Sbjct: 1207 caagatgatcaagattcagta 1187
>gb|U53438.1|YMU53438 Yam mosaic virus BF54 polyprotein (NIb protein and coat protein) gene, partial cds Length = 1343 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 486 caagatgatcaagattcagta 506 ||||||||||||||||||||| Sbjct: 1207 caagatgatcaagattcagta 1187
>ref|XM_464147.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3121 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 gcttcttgcaatggctgaagaatt 64 |||| ||||||||||||||||||| Sbjct: 2010 gcttattgcaatggctgaagaatt 2033
>ref|XM_506717.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1008_C03.11 mRNA Length = 3169 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 gcttcttgcaatggctgaagaatt 64 |||| ||||||||||||||||||| Sbjct: 2017 gcttattgcaatggctgaagaatt 2040
>gb|AY724537.1| Rattus norvegicus clone UI-R-FJ0-cqb-a-24-0-UI unknown mRNA Length = 3391 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 caatgatgatgaagatgaag 39 |||||||||||||||||||| Sbjct: 1909 caatgatgatgaagatgaag 1928
>gb|BC079880.1| Mus musculus RIKEN cDNA 2310066E14 gene, mRNA (cDNA clone MGC:100216 IMAGE:6852251), complete cds Length = 4066 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 caatgatgatgaagatgaag 39 |||||||||||||||||||| Sbjct: 2630 caatgatgatgaagatgaag 2649
>ref|XM_709589.1| Candida albicans SC5314 hypothetical protein (CaO19.6976), mRNA Length = 1842 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 ttttgcttccaccattggag 128 |||||||||||||||||||| Sbjct: 234 ttttgcttccaccattggag 253
>gb|BC030451.1| Mus musculus RIKEN cDNA 2310066E14 gene, mRNA (cDNA clone MGC:40645 IMAGE:5400266), complete cds Length = 3209 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 caatgatgatgaagatgaag 39 |||||||||||||||||||| Sbjct: 1779 caatgatgatgaagatgaag 1798
>ref|XM_706922.1| Candida albicans SC5314 hypothetical protein (CaO19.8264), mRNA Length = 2913 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 caatgatgatgaagatgaag 39 |||||||||||||||||||| Sbjct: 1155 caatgatgatgaagatgaag 1174
>ref|XM_706921.1| Candida albicans SC5314 hypothetical protein (CaO19.8263), mRNA Length = 426 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 caatgatgatgaagatgaag 39 |||||||||||||||||||| Sbjct: 52 caatgatgatgaagatgaag 33
>ref|XM_706901.1| Candida albicans SC5314 hypothetical protein (CaO19.649), mRNA Length = 2913 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 caatgatgatgaagatgaag 39 |||||||||||||||||||| Sbjct: 1155 caatgatgatgaagatgaag 1174
>ref|XM_706900.1| Candida albicans SC5314 hypothetical protein (CaO19.648), mRNA Length = 426 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 caatgatgatgaagatgaag 39 |||||||||||||||||||| Sbjct: 52 caatgatgatgaagatgaag 33
>gb|AC122487.3| Mus musculus BAC clone RP24-381E21 from chromosome 17, complete sequence Length = 149666 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 aacaatgatgatgaagatga 37 |||||||||||||||||||| Sbjct: 64308 aacaatgatgatgaagatga 64289
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 579 cttcctgtcattgtcaattt 598 |||||||||||||||||||| Sbjct: 22037680 cttcctgtcattgtcaattt 22037699
>ref|XM_994701.1| PREDICTED: Mus musculus RIKEN cDNA 2310066E14 gene (2310066E14Rik), mRNA Length = 4141 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 caatgatgatgaagatgaag 39 |||||||||||||||||||| Sbjct: 2710 caatgatgatgaagatgaag 2729
>ref|XM_915483.2| PREDICTED: Mus musculus RIKEN cDNA 2310066E14 gene, transcript variant 4 (2310066E14Rik), mRNA Length = 4282 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 caatgatgatgaagatgaag 39 |||||||||||||||||||| Sbjct: 2851 caatgatgatgaagatgaag 2870
>ref|XM_486159.3| PREDICTED: Mus musculus RIKEN cDNA 2310066E14 gene, transcript variant 1 (2310066E14Rik), mRNA Length = 4282 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 caatgatgatgaagatgaag 39 |||||||||||||||||||| Sbjct: 2851 caatgatgatgaagatgaag 2870
>gb|AC146183.3| Pan troglodytes BAC clone CH251-548L16 from Y, complete sequence Length = 234142 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 gtcatcctgtggtcttttcc 300 |||||||||||||||||||| Sbjct: 63079 gtcatcctgtggtcttttcc 63098
>gb|AC114825.4| Mus musculus BAC clone RP24-104P22 from chromosome 3, complete sequence Length = 202237 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 gaggctagcagctggtgagt 264 |||||||||||||||||||| Sbjct: 166344 gaggctagcagctggtgagt 166363
>emb|BX908750.17| Zebrafish DNA sequence from clone DKEY-193E13 in linkage group 2, complete sequence Length = 171327 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 tagcagctggtgagtggttt 269 |||||||||||||||||||| Sbjct: 10592 tagcagctggtgagtggttt 10573
>ref|XM_808334.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein (MASP) (Tc00.1047053510371.70) partial mRNA Length = 816 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 atgatgatgaagatgaagtg 41 |||||||||||||||||||| Sbjct: 365 atgatgatgaagatgaagtg 384
>gb|AC127419.3| Mus musculus BAC clone RP24-242N1 from chromosome 8, complete sequence Length = 167099 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 caatgatgatgaagatgaag 39 |||||||||||||||||||| Sbjct: 109983 caatgatgatgaagatgaag 110002
>gb|AC122503.4| Mus musculus BAC clone RP24-418L2 from chromosome 3, complete sequence Length = 147750 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 568 tagcacatatccttcctgtcattg 591 ||||||||||| |||||||||||| Sbjct: 69014 tagcacatatctttcctgtcattg 68991
>emb|Z49066.1|CEC04H4 Caenorhabditis elegans Cosmid C04H4, complete sequence Length = 33421 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 atgatgatgaagatgaagtg 41 |||||||||||||||||||| Sbjct: 29769 atgatgatgaagatgaagtg 29750
>gb|AC160933.3| Mus musculus BAC clone RP24-172H5 from chromosome 3, complete sequence Length = 158302 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 gaggctagcagctggtgagt 264 |||||||||||||||||||| Sbjct: 56978 gaggctagcagctggtgagt 56997
>gb|AC145574.5| Mus musculus BAC clone RP24-411C16 from chromosome 6, complete sequence Length = 147836 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 aacaatgatgatgaagatga 37 |||||||||||||||||||| Sbjct: 71957 aacaatgatgatgaagatga 71938
>emb|AL512655.17| Human DNA sequence from clone RP11-536C2 on chromosome 13, complete sequence Length = 146002 Score = 40.1 bits (20), Expect = 8.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 91 gtgtagagcatgctcatgttttgcttccacca 122 ||||| || |||||||||||||||||| |||| Sbjct: 117429 gtgtacagtatgctcatgttttgcttcaacca 117460
>gb|AC129852.5| Homo sapiens X BAC RP11-540E20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 170072 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 tgtagagcatgctcatgttt 111 |||||||||||||||||||| Sbjct: 67154 tgtagagcatgctcatgttt 67135
>emb|Z54354.1|SPAC2G11 S.pombe chromosome I cosmid c2G11 Length = 36162 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 caatgatgatgaagatgaag 39 |||||||||||||||||||| Sbjct: 34682 caatgatgatgaagatgaag 34701
>emb|BX927151.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5, complete genome; segment 4/10 Length = 349459 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 367 gccaagatgatatgcctatg 386 |||||||||||||||||||| Sbjct: 97194 gccaagatgatatgcctatg 97213
>emb|AL772266.6| Zebrafish DNA sequence from clone CH211-147H1 in linkage group 12 Contains a novel gene similar to mouse Grid2ip (ionotropic glutamate receptor delta 2 (Grid2) interacting protein 1), a novel gene similar to zebrafish pim1, a novel gene similar to vertebrate RGS9 (regulator of G-protein signalling 9) and two CpG islands, complete sequence Length = 179911 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 agtgtcatcctgtggtcttt 297 |||||||||||||||||||| Sbjct: 55816 agtgtcatcctgtggtcttt 55835
>gb|AC108451.9| Homo sapiens chromosome 15, clone RP11-379K22, complete sequence Length = 198707 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 ttgaagacagaaatcatgtc 466 |||||||||||||||||||| Sbjct: 115930 ttgaagacagaaatcatgtc 115911
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 69 gtgttcattccttatgttggtggt 92 ||||||||||||| |||||||||| Sbjct: 4804281 gtgttcattccttgtgttggtggt 4804258
>emb|BX571974.6| Zebrafish DNA sequence from clone DKEY-29P4 in linkage group 12, complete sequence Length = 267018 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 agtgtcatcctgtggtcttt 297 |||||||||||||||||||| Sbjct: 118984 agtgtcatcctgtggtcttt 118965
>dbj|BS000630.2| Pan troglodytes chromosome Y clone: PTB-245N19, complete sequence Length = 149685 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 gtcatcctgtggtcttttcc 300 |||||||||||||||||||| Sbjct: 57067 gtcatcctgtggtcttttcc 57086
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 gtcatcctgtggtcttttcc 300 |||||||||||||||||||| Sbjct: 18732214 gtcatcctgtggtcttttcc 18732195
>dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026 Length = 2324132 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 ccatttgaagacagaaatca 462 |||||||||||||||||||| Sbjct: 751418 ccatttgaagacagaaatca 751399
>ref|NM_137510.2| Drosophila melanogaster CG30122-RB (CG30122), mRNA Length = 4617 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 cgaaaacaatgatgatgaagatga 37 ||||||||||||||| |||||||| Sbjct: 2180 cgaaaacaatgatgaagaagatga 2203
>gb|AC099028.1| Drosophila melanogaster, chromosome 2R, region 55F-56X, BAC clone BACR08F09, complete sequence Length = 192358 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 14 cgaaaacaatgatgatgaagatga 37 ||||||||||||||| |||||||| Sbjct: 10921 cgaaaacaatgatgaagaagatga 10898
>gb|AC155636.3| Mus musculus BAC clone RP23-345F5 from chromosome 17, complete sequence Length = 223528 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 528 tgtgccgctcttggaaaatt 547 |||||||||||||||||||| Sbjct: 101136 tgtgccgctcttggaaaatt 101155
>gb|AC157278.2| Mus musculus BAC clone RP23-153L22 from chromosome 12, complete sequence Length = 199381 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 433 tagaacagagccatttgaag 452 |||||||||||||||||||| Sbjct: 190299 tagaacagagccatttgaag 190280
>dbj|AK052316.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched library, clone:D330027C19 product:similar to CDNA FLJ13725 FIS, CLONE PLACE3000009, WEAKLY SIMILAR TO DNA-DIRECTED RNA POLYMERASE II LARGEST SUBUNIT (EC 2.7.7.6) [Homo sapiens], full insert sequence Length = 3876 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 caatgatgatgaagatgaag 39 |||||||||||||||||||| Sbjct: 2597 caatgatgatgaagatgaag 2616
>ref|NM_001018492.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC2G11.14), partial mRNA Length = 2940 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 caatgatgatgaagatgaag 39 |||||||||||||||||||| Sbjct: 2109 caatgatgatgaagatgaag 2128
>ref|NM_182172.3| Caenorhabditis elegans DH11.5b (DH11.5) mRNA, complete cds Length = 1547 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 atgatgatgaagatgaagtg 41 |||||||||||||||||||| Sbjct: 292 atgatgatgaagatgaagtg 273
>ref|NM_063271.3| Caenorhabditis elegans DH11.5a (DH11.5) mRNA, complete cds Length = 1648 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 atgatgatgaagatgaagtg 41 |||||||||||||||||||| Sbjct: 292 atgatgatgaagatgaagtg 273
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 579 cttcctgtcattgtcaattt 598 |||||||||||||||||||| Sbjct: 22030709 cttcctgtcattgtcaattt 22030728
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 gcttcttgcaatggctgaagaatt 64 |||| ||||||||||||||||||| Sbjct: 2569043 gcttattgcaatggctgaagaatt 2569066
>gb|AC009850.10|AC009850 Drosophila melanogaster, chromosome 2R, region 55E-55F, BAC clone BACR27L09, complete sequence Length = 173059 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 14 cgaaaacaatgatgatgaagatga 37 ||||||||||||||| |||||||| Sbjct: 171952 cgaaaacaatgatgaagaagatga 171929
>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome Length = 3309401 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 367 gccaagatgatatgcctatg 386 |||||||||||||||||||| Sbjct: 1142009 gccaagatgatatgcctatg 1142028
>gb|AC109602.6| Oryza sativa chromosome 3 BAC OSJNBa0087M10 genomic sequence, complete sequence Length = 167397 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 579 cttcctgtcattgtcaattt 598 |||||||||||||||||||| Sbjct: 110602 cttcctgtcattgtcaattt 110583
>gb|AC006383.2|AC006383 Homo sapiens BAC clone RP11-498H20 from Y, complete sequence Length = 105210 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 gtcatcctgtggtcttttcc 300 |||||||||||||||||||| Sbjct: 57735 gtcatcctgtggtcttttcc 57716
>gb|BT003578.1| Drosophila melanogaster LD24631 full insert cDNA Length = 2519 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 cgaaaacaatgatgatgaagatga 37 ||||||||||||||| |||||||| Sbjct: 274 cgaaaacaatgatgaagaagatga 297
>ref|XM_214666.3| PREDICTED: Rattus norvegicus similar to mKIAA1930 protein (predicted) (LOC291974), mRNA Length = 4234 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 caatgatgatgaagatgaag 39 |||||||||||||||||||| Sbjct: 2784 caatgatgatgaagatgaag 2803
>gb|AC174081.1| Mus musculus BAC clone RP24-376P15 from chromosome 6, complete sequence Length = 153392 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 aacaatgatgatgaagatga 37 |||||||||||||||||||| Sbjct: 153201 aacaatgatgatgaagatga 153182
>dbj|AP003224.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0010B10 Length = 155263 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 atgaaagaaaacgacattgt 220 |||||||||||||||||||| Sbjct: 51364 atgaaagaaaacgacattgt 51345
>dbj|AP005288.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1008_C03 Length = 103297 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 gcttcttgcaatggctgaagaatt 64 |||| ||||||||||||||||||| Sbjct: 47826 gcttattgcaatggctgaagaatt 47849
>dbj|AK121963.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108C09, full insert sequence Length = 3120 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 gcttcttgcaatggctgaagaatt 64 |||| ||||||||||||||||||| Sbjct: 2009 gcttattgcaatggctgaagaatt 2032
>dbj|AK105609.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-B03, full insert sequence Length = 3169 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 gcttcttgcaatggctgaagaatt 64 |||| ||||||||||||||||||| Sbjct: 2017 gcttattgcaatggctgaagaatt 2040
>gb|AE003798.3| Drosophila melanogaster chromosome 2R, section 52 of 73 of the complete sequence Length = 242365 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 14 cgaaaacaatgatgatgaagatga 37 ||||||||||||||| |||||||| Sbjct: 7385 cgaaaacaatgatgaagaagatga 7362
>dbj|AK122573.1| Mus musculus mRNA for mKIAA1930 protein Length = 4085 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 caatgatgatgaagatgaag 39 |||||||||||||||||||| Sbjct: 2690 caatgatgatgaagatgaag 2709
>gb|BC099098.1| Rattus norvegicus similar to mKIAA1930 protein, mRNA (cDNA clone IMAGE:7459580), partial cds Length = 3082 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 caatgatgatgaagatgaag 39 |||||||||||||||||||| Sbjct: 1647 caatgatgatgaagatgaag 1666
>emb|BX465204.5| Zebrafish DNA sequence from clone CH211-160N19 in linkage group 22, complete sequence Length = 168776 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 tagcagctggtgagtggttt 269 |||||||||||||||||||| Sbjct: 9861 tagcagctggtgagtggttt 9842
>gb|AC004429.1|AC004429 Drosophila melanogaster DNA sequence (P1 DS01552 (D182)), complete sequence Length = 51536 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 14 cgaaaacaatgatgatgaagatga 37 ||||||||||||||| |||||||| Sbjct: 5960 cgaaaacaatgatgaagaagatga 5937
>gb|AC136215.5| Mus musculus BAC clone RP23-148L8 from 6, complete sequence Length = 167126 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 tcctgtggtcttttccatat 304 |||||||||||||||||||| Sbjct: 39867 tcctgtggtcttttccatat 39886
>gb|AC127693.4| Mus musculus BAC clone RP23-135G19 from 17, complete sequence Length = 223894 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 aacaatgatgatgaagatga 37 |||||||||||||||||||| Sbjct: 212991 aacaatgatgatgaagatga 212972
>emb|CR974487.10| Mouse DNA sequence from clone RP23-136M7 on chromosome 12, complete sequence Length = 218303 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 433 tagaacagagccatttgaag 452 |||||||||||||||||||| Sbjct: 9204 tagaacagagccatttgaag 9185
>dbj|AP006378.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT44A10, TM0223, complete sequence Length = 101752 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 caatgatgatgaagatgaag 39 |||||||||||||||||||| Sbjct: 24321 caatgatgatgaagatgaag 24340
>emb|AL772371.3| Mouse DNA sequence from clone RP23-234N12 on chromosome 4, complete sequence Length = 237282 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 481 ttacccaagatgatcaagat 500 |||||||||||||||||||| Sbjct: 15055 ttacccaagatgatcaagat 15074
>emb|AL772345.5| Mouse DNA sequence from clone RP23-311I21 on chromosome 1, complete sequence Length = 198092 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 335 aacagaattgaggactatttatgg 358 ||||||| |||||||||||||||| Sbjct: 190854 aacagaaatgaggactatttatgg 190877 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,863,765 Number of Sequences: 3902068 Number of extensions: 5863765 Number of successful extensions: 155559 Number of sequences better than 10.0: 138 Number of HSP's better than 10.0 without gapping: 138 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 154907 Number of HSP's gapped (non-prelim): 622 length of query: 625 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 602 effective length of database: 17,143,297,704 effective search space: 10320265217808 effective search space used: 10320265217808 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
