ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags5a17 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_187638.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1218 Score = 537 bits (271), Expect = e-149 Identities = 469/534 (87%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 38 cgtccggnggagaatgccgtacggatgaagaatggttcagataggatgtgcatgcctgca 97 ||||||| |||||||||| || |||||| |||||| |||| |||||||| ||||||||| Sbjct: 421 cgtccggaggagaatgccataaggatgagaaatggtgcagagaggatgtgtatgcctgca 480 Query: 98 ccgactgttgagcagttcgtggacgcagtgaaacaaaccgttttggcaaataaaagatgg 157 || ||| |||| || || ||||| ||||| || ||||||||||||||||||||||||||| Sbjct: 481 ccaactcttgaacaatttgtggatgcagtaaagcaaaccgttttggcaaataaaagatgg 540 Query: 158 gtgcctcctactggtaaaggttccttgtatatcaggccactacttattggaagcggggct 217 ||||| || || |||||||| ||| ||||||| ||||| || ||||| ||||| || ||| Sbjct: 541 gtgcccccaaccggtaaaggctccctgtatataaggccgctgcttatgggaagtggagct 600 Query: 218 attcttggtcttgcacctgctcctgagtacaccttccttatttatgtctcacctgttgga 277 | |||||||||||||||||||||||||| ||||| | |||| |||||| |||||||| Sbjct: 601 gtccttggtcttgcacctgctcctgagtatacctttatgatttttgtctcccctgttggg 660 Query: 278 aactatttcaaggaaggtttagctcctattaacttgattattgaagataactttcaccgt 337 ||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||| Sbjct: 661 aactatttcaaggaaggtttagcccctattaacttgattatagaagaaaactttcaccgt 720 Query: 338 gcggcccctggtggaactggaggcgtgaaaaccattggaaactatgcctcggtgttgaaa 397 || ||||||||||||||||| || ||||||||||||||||||||||||||||| || ||| Sbjct: 721 gctgcccctggtggaactggcggagtgaaaaccattggaaactatgcctcggtattaaaa 780 Query: 398 gcacagagaaccgcaaaggagaaaggatattctgatgtcctctatttggacgccgttcac 457 |||||||| | ||||| ||||||||||||| |||||||||||| | || ||||||||| Sbjct: 781 gcacagaggattgcaaaacagaaaggatattcagatgtcctctatctagatgccgttcac 840 Query: 458 aacaaatatctggaagaagtttcttcgtgcaatattttcgttgtgaaaggcaatgctatt 517 || ||||||||||||||||| |||||||||||||| || ||||||||||||||| |||| Sbjct: 841 aagaaatatctggaagaagtgtcttcgtgcaatatctttattgtgaaaggcaatgttatt 900 Query: 518 tgcactccagcaatagaaggaacgatactgcctggtatcacaagggaaaagtat 571 | |||||||||||| ||||||| |||||||||||||| |||| |||||||||| Sbjct: 901 tctactccagcaataaaaggaaccatactgcctggtataacaa-ggaaaagtat 953
>dbj|AK108687.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-C06, full insert sequence Length = 1472 Score = 537 bits (271), Expect = e-149 Identities = 469/534 (87%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 38 cgtccggnggagaatgccgtacggatgaagaatggttcagataggatgtgcatgcctgca 97 ||||||| |||||||||| || |||||| |||||| |||| |||||||| ||||||||| Sbjct: 480 cgtccggaggagaatgccataaggatgagaaatggtgcagagaggatgtgtatgcctgca 539 Query: 98 ccgactgttgagcagttcgtggacgcagtgaaacaaaccgttttggcaaataaaagatgg 157 || ||| |||| || || ||||| ||||| || ||||||||||||||||||||||||||| Sbjct: 540 ccaactcttgaacaatttgtggatgcagtaaagcaaaccgttttggcaaataaaagatgg 599 Query: 158 gtgcctcctactggtaaaggttccttgtatatcaggccactacttattggaagcggggct 217 ||||| || || |||||||| ||| ||||||| ||||| || ||||| ||||| || ||| Sbjct: 600 gtgcccccaaccggtaaaggctccctgtatataaggccgctgcttatgggaagtggagct 659 Query: 218 attcttggtcttgcacctgctcctgagtacaccttccttatttatgtctcacctgttgga 277 | |||||||||||||||||||||||||| ||||| | |||| |||||| |||||||| Sbjct: 660 gtccttggtcttgcacctgctcctgagtatacctttatgatttttgtctcccctgttggg 719 Query: 278 aactatttcaaggaaggtttagctcctattaacttgattattgaagataactttcaccgt 337 ||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||| Sbjct: 720 aactatttcaaggaaggtttagcccctattaacttgattatagaagaaaactttcaccgt 779 Query: 338 gcggcccctggtggaactggaggcgtgaaaaccattggaaactatgcctcggtgttgaaa 397 || ||||||||||||||||| || ||||||||||||||||||||||||||||| || ||| Sbjct: 780 gctgcccctggtggaactggcggagtgaaaaccattggaaactatgcctcggtattaaaa 839 Query: 398 gcacagagaaccgcaaaggagaaaggatattctgatgtcctctatttggacgccgttcac 457 |||||||| | ||||| ||||||||||||| |||||||||||| | || ||||||||| Sbjct: 840 gcacagaggattgcaaaacagaaaggatattcagatgtcctctatctagatgccgttcac 899 Query: 458 aacaaatatctggaagaagtttcttcgtgcaatattttcgttgtgaaaggcaatgctatt 517 || ||||||||||||||||| |||||||||||||| || ||||||||||||||| |||| Sbjct: 900 aagaaatatctggaagaagtgtcttcgtgcaatatctttattgtgaaaggcaatgttatt 959 Query: 518 tgcactccagcaatagaaggaacgatactgcctggtatcacaagggaaaagtat 571 | |||||||||||| ||||||| |||||||||||||| |||| |||||||||| Sbjct: 960 tctactccagcaataaaaggaaccatactgcctggtataacaa-ggaaaagtat 1012
>gb|AY106370.1| Zea mays PCO098993 mRNA sequence Length = 1720 Score = 349 bits (176), Expect = 7e-93 Identities = 414/492 (84%), Gaps = 1/492 (0%) Strand = Plus / Plus Query: 80 aggatgtgcatgcctgcaccgactgttgagcagttcgtggacgcagtgaaacaaaccgtt 139 |||||||||||||||||||| |||| |||||||| | || ||||| |||||||||||| Sbjct: 663 aggatgtgcatgcctgcaccctctgtcgagcagtttattgatgcagtaaaacaaaccgtt 722 Query: 140 ttggcaaataaaagatgggtgcctcctactggtaaaggttccttgtatatcaggccacta 199 | |||||||| |||||| | |||||||||||||||||||| ||||||| ||||| || Sbjct: 723 cttgcaaataagagatggattcctcctactggtaaaggttctctgtatattaggccctta 782 Query: 200 cttattggaagcggggctattcttggtcttgcacctgctcctgagtacaccttccttatt 259 ||||| ||||| |||||| |||||||||||||||||||||||||||| || ||| |||| Sbjct: 783 cttatgggaagtggggctgttcttggtcttgcacctgctcctgagtatacattcattata 842 Query: 260 tatgtctcacctgttggaaactatttcaaggaaggtttagctcctattaacttgattatt 319 | |||||| |||||||||||||| || |||||||||||||| || || || ||||| || Sbjct: 843 tttgtctctcctgttggaaactactttaaggaaggtttagcaccaataaatttgatagtt 902 Query: 320 gaagataactttcaccgtgcggcccctggtggaactggaggcgtgaaaaccattggaaac 379 ||||| || || || ||||| | |||||||| ||||| || ||||| ||||| ||||| Sbjct: 903 gaagacaagttccatcgtgctactcctggtggtactgggggtgtgaagaccataggaaat 962 Query: 380 tatgcctcggtgttgaaagcacagagaaccgcaaaggagaaaggatattctgatgtcctc 439 ||||| |||||||||| ||||||| || |||||||| || || ||||||||||||||| Sbjct: 963 tatgcttcggtgttgatggcacagaaaattgcaaaggaaaagggttattctgatgtcctc 1022 Query: 440 tatttggacgccgttcacaacaaatatctggaagaagtttcttcgtgcaatattttcgtt 499 || |||||||| |||||||| || || || |||||||||||||| |||||| |||| ||| Sbjct: 1023 tacttggacgctgttcacaagaagtaccttgaagaagtttcttcatgcaatgtttttgtt 1082 Query: 500 gtgaaaggcaatgctatttgcactccagcaatagaaggaacgatactgcctggtatcaca 559 || || | ||||| ||||| || ||||||||| ||||||| ||| | |||||||||||| Sbjct: 1083 gtcaaggacaatgttatttctaccccagcaataaaaggaacaatattacctggtatcaca 1142 Query: 560 agggaaaagtat 571 | |||||||||| Sbjct: 1143 a-ggaaaagtat 1153
>dbj|AK072756.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023138J17, full insert sequence Length = 2016 Score = 335 bits (169), Expect = 1e-88 Identities = 413/493 (83%), Gaps = 1/493 (0%) Strand = Plus / Plus Query: 83 atgtgcatgcctgcaccgactgttgagcagttcgtggacgcagtgaaacaaaccgttttg 142 |||||||||||||| || | |||||||||||| ||||| ||||| || ||||| ||||| Sbjct: 1010 atgtgcatgcctgcgcctagtgttgagcagtttgtggatgcagtaaagcaaactgtttta 1069 Query: 143 gcaaataaaagatgggtgcctcctactggtaaaggttccttgtatatcaggccactactt 202 ||||| || ||||||||||||||||| ||||||||||| |||||||| || || ||||| Sbjct: 1070 gcaaacaagagatgggtgcctcctaccggtaaaggttctttgtatattagaccgctactc 1129 Query: 203 attggaagcggggctattcttggtcttgcacctgctcctgagtacaccttccttatttat 262 || || || || ||| |||||||||||||||||||||||||||| || ||| |||| | | Sbjct: 1130 atgggtagtggtgctgttcttggtcttgcacctgctcctgagtatacgttcattatattt 1189 Query: 263 gtctcacctgttggaaactatttcaaggaaggtttagctcctattaacttgattattgaa 322 ||||| ||||| || ||||| || ||||||||||||||||| || || ||||| ||||| Sbjct: 1190 gtctcgcctgtggggaactactttaaggaaggtttagctccaataaatttgatagttgaa 1249 Query: 323 gataactttcaccgtgcggcccctggtggaactggaggcgtgaaaaccattggaaactat 382 ||||| ||||| ||||| ||||||||||||||||| | ||||| ||||| ||||| ||| Sbjct: 1250 gataagtttcatcgtgcaacccctggtggaactggaagtgtgaagaccataggaaattat 1309 Query: 383 gcctcggtgttgaaagcacagagaaccgcaaaggagaaaggatattctgatgtcctctat 442 |||||||| |||| ||||||| | ||||| || || || ||||||||||| ||||| Sbjct: 1310 gcctcggtcttgatggcacagaagattgcaaaagaaaagggctattctgatgttctctac 1369 Query: 443 ttggacgccgttcacaacaaatatctggaagaagtttcttcgtgcaatattttcgttgtg 502 ||||| || |||||||| || ||||| |||||||||||||| || |||||||| ||||| Sbjct: 1370 ttggatgctgttcacaaaaagtatcttgaagaagtttcttcatgtaatatttttgttgtc 1429 Query: 503 aaaggcaatgctatttgcactccagcaatagaaggaacgatactgcctggtatcacaagg 562 || ||||||| |||| ||||||||| || ||||||| ||| |||| || ||||||| | Sbjct: 1430 aagggcaatgtcatttcaactccagcagtaaaaggaacaatattgccaggcatcacaa-g 1488 Query: 563 gaaaagtatcatt 575 ||||||||||||| Sbjct: 1489 gaaaagtatcatt 1501
>ref|NM_197648.1| Oryza sativa (japonica cultivar-group) putative aminotransferase (OSJNBa0082M15.2), mRNA Length = 1449 Score = 319 bits (161), Expect = 6e-84 Identities = 411/493 (83%), Gaps = 1/493 (0%) Strand = Plus / Plus Query: 83 atgtgcatgcctgcaccgactgttgagcagttcgtggacgcagtgaaacaaaccgttttg 142 |||||||||||||| || | |||||||||||| ||||| ||||| || || || ||||| Sbjct: 394 atgtgcatgcctgcgcctagtgttgagcagtttgtggatgcagtaaagcagactgtttta 453 Query: 143 gcaaataaaagatgggtgcctcctactggtaaaggttccttgtatatcaggccactactt 202 ||||| || ||||||||||||||||| ||||||||||| || ||||| || || |||||| Sbjct: 454 gcaaacaagagatgggtgcctcctaccggtaaaggttctttatatattagaccgctactt 513 Query: 203 attggaagcggggctattcttggtcttgcacctgctcctgagtacaccttccttatttat 262 || || || || ||| |||||||||||||||||||||||||||| || ||| |||| | | Sbjct: 514 atgggtagtggtgctgttcttggtcttgcacctgctcctgagtatacgttcattatattt 573 Query: 263 gtctcacctgttggaaactatttcaaggaaggtttagctcctattaacttgattattgaa 322 ||||| ||||| || ||||| || ||||||||||||||||| || || ||||| ||||| Sbjct: 574 gtctcccctgtggggaactactttaaggaaggtttagctccaataaatttgatagttgaa 633 Query: 323 gataactttcaccgtgcggcccctggtggaactggaggcgtgaaaaccattggaaactat 382 ||||| ||||| ||||| ||||||||||||||||| | ||||| ||||| ||||| ||| Sbjct: 634 gataagtttcatcgtgcaacccctggtggaactggaagtgtgaagaccataggaaattat 693 Query: 383 gcctcggtgttgaaagcacagagaaccgcaaaggagaaaggatattctgatgtcctctat 442 |||||||| |||| ||||| | | ||||| || || || ||||||||||| ||||| Sbjct: 694 gcctcggtcttgatggcacaaaagattgcaaaagaaaagggctattctgatgttctctac 753 Query: 443 ttggacgccgttcacaacaaatatctggaagaagtttcttcgtgcaatattttcgttgtg 502 ||||| || |||||||| || ||||| |||||||||||||| || |||||||| ||||| Sbjct: 754 ttggatgctgttcacaaaaagtatcttgaagaagtttcttcatgtaatatttttgttgtc 813 Query: 503 aaaggcaatgctatttgcactccagcaatagaaggaacgatactgcctggtatcacaagg 562 || ||||||| |||| ||||||||| || ||||||| ||| |||| || ||||||| | Sbjct: 814 aagggcaatgtcatttcaactccagcagtaaaaggaacaatattgccaggcatcacaa-g 872 Query: 563 gaaaagtatcatt 575 ||||||||||||| Sbjct: 873 gaaaagtatcatt 885
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 157 bits (79), Expect = 5e-35 Identities = 97/103 (94%) Strand = Plus / Minus Query: 288 aggaaggtttagctcctattaacttgattattgaagataactttcaccgtgcggcccctg 347 ||||||||||||| ||||||||||||||||| ||||| |||||||||||||| ||||||| Sbjct: 356173 aggaaggtttagcccctattaacttgattatagaagaaaactttcaccgtgctgcccctg 356114 Query: 348 gtggaactggaggcgtgaaaaccattggaaactatgcctcggt 390 |||||||||| || ||||||||||||||||||||||||||||| Sbjct: 356113 gtggaactggcggagtgaaaaccattggaaactatgcctcggt 356071 Score = 117 bits (59), Expect = 5e-23 Identities = 106/122 (86%) Strand = Plus / Minus Query: 38 cgtccggnggagaatgccgtacggatgaagaatggttcagataggatgtgcatgcctgca 97 ||||||| |||||||||| || |||||| |||||| |||| |||||||| ||||||||| Sbjct: 356772 cgtccggaggagaatgccataaggatgagaaatggtgcagagaggatgtgtatgcctgca 356713 Query: 98 ccgactgttgagcagttcgtggacgcagtgaaacaaaccgttttggcaaataaaagatgg 157 || ||| |||| || || ||||| ||||| || ||||||||||||||||||||||||||| Sbjct: 356712 ccaactcttgaacaatttgtggatgcagtaaagcaaaccgttttggcaaataaaagatgg 356653 Query: 158 gt 159 || Sbjct: 356652 gt 356651 Score = 111 bits (56), Expect = 3e-21 Identities = 98/112 (87%) Strand = Plus / Minus Query: 395 aaagcacagagaaccgcaaaggagaaaggatattctgatgtcctctatttggacgccgtt 454 ||||||||||| | ||||| ||||||||||||| |||||||||||| | || |||||| Sbjct: 355518 aaagcacagaggattgcaaaacagaaaggatattcagatgtcctctatctagatgccgtt 355459 Query: 455 cacaacaaatatctggaagaagtttcttcgtgcaatattttcgttgtgaaag 506 ||||| ||||||||||||||||| |||||||||||||| || ||||||||| Sbjct: 355458 cacaagaaatatctggaagaagtgtcttcgtgcaatatctttattgtgaaag 355407 Score = 107 bits (54), Expect = 4e-20 Identities = 114/134 (85%) Strand = Plus / Minus Query: 157 ggtgcctcctactggtaaaggttccttgtatatcaggccactacttattggaagcggggc 216 |||||| || || |||||||| ||| ||||||| ||||| || ||||| ||||| || || Sbjct: 356550 ggtgcccccaaccggtaaaggctccctgtatataaggccgctgcttatgggaagtggagc 356491 Query: 217 tattcttggtcttgcacctgctcctgagtacaccttccttatttatgtctcacctgttgg 276 | | |||||||||||||||||||||||||| ||||| | |||| |||||| |||||||| Sbjct: 356490 tgtccttggtcttgcacctgctcctgagtatacctttatgatttttgtctcccctgttgg 356431 Query: 277 aaactatttcaagg 290 ||||||||||||| Sbjct: 356430 gaactatttcaagg 356417 Score = 67.9 bits (34), Expect = 4e-08 Identities = 59/66 (89%), Gaps = 1/66 (1%) Strand = Plus / Minus Query: 506 ggcaatgctatttgcactccagcaatagaaggaacgatactgcctggtatcacaagggaa 565 ||||||| ||||| |||||||||||| ||||||| |||||||||||||| |||| |||| Sbjct: 355131 ggcaatgttatttctactccagcaataaaaggaaccatactgcctggtataacaa-ggaa 355073 Query: 566 aagtat 571 |||||| Sbjct: 355072 aagtat 355067
>gb|AC107224.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0009C08, complete sequence Length = 137033 Score = 157 bits (79), Expect = 5e-35 Identities = 97/103 (94%) Strand = Plus / Minus Query: 288 aggaaggtttagctcctattaacttgattattgaagataactttcaccgtgcggcccctg 347 ||||||||||||| ||||||||||||||||| ||||| |||||||||||||| ||||||| Sbjct: 83701 aggaaggtttagcccctattaacttgattatagaagaaaactttcaccgtgctgcccctg 83642 Query: 348 gtggaactggaggcgtgaaaaccattggaaactatgcctcggt 390 |||||||||| || ||||||||||||||||||||||||||||| Sbjct: 83641 gtggaactggcggagtgaaaaccattggaaactatgcctcggt 83599 Score = 117 bits (59), Expect = 5e-23 Identities = 106/122 (86%) Strand = Plus / Minus Query: 38 cgtccggnggagaatgccgtacggatgaagaatggttcagataggatgtgcatgcctgca 97 ||||||| |||||||||| || |||||| |||||| |||| |||||||| ||||||||| Sbjct: 84300 cgtccggaggagaatgccataaggatgagaaatggtgcagagaggatgtgtatgcctgca 84241 Query: 98 ccgactgttgagcagttcgtggacgcagtgaaacaaaccgttttggcaaataaaagatgg 157 || ||| |||| || || ||||| ||||| || ||||||||||||||||||||||||||| Sbjct: 84240 ccaactcttgaacaatttgtggatgcagtaaagcaaaccgttttggcaaataaaagatgg 84181 Query: 158 gt 159 || Sbjct: 84180 gt 84179 Score = 111 bits (56), Expect = 3e-21 Identities = 98/112 (87%) Strand = Plus / Minus Query: 395 aaagcacagagaaccgcaaaggagaaaggatattctgatgtcctctatttggacgccgtt 454 ||||||||||| | ||||| ||||||||||||| |||||||||||| | || |||||| Sbjct: 83046 aaagcacagaggattgcaaaacagaaaggatattcagatgtcctctatctagatgccgtt 82987 Query: 455 cacaacaaatatctggaagaagtttcttcgtgcaatattttcgttgtgaaag 506 ||||| ||||||||||||||||| |||||||||||||| || ||||||||| Sbjct: 82986 cacaagaaatatctggaagaagtgtcttcgtgcaatatctttattgtgaaag 82935 Score = 107 bits (54), Expect = 4e-20 Identities = 114/134 (85%) Strand = Plus / Minus Query: 157 ggtgcctcctactggtaaaggttccttgtatatcaggccactacttattggaagcggggc 216 |||||| || || |||||||| ||| ||||||| ||||| || ||||| ||||| || || Sbjct: 84078 ggtgcccccaaccggtaaaggctccctgtatataaggccgctgcttatgggaagtggagc 84019 Query: 217 tattcttggtcttgcacctgctcctgagtacaccttccttatttatgtctcacctgttgg 276 | | |||||||||||||||||||||||||| ||||| | |||| |||||| |||||||| Sbjct: 84018 tgtccttggtcttgcacctgctcctgagtatacctttatgatttttgtctcccctgttgg 83959 Query: 277 aaactatttcaagg 290 ||||||||||||| Sbjct: 83958 gaactatttcaagg 83945 Score = 67.9 bits (34), Expect = 4e-08 Identities = 59/66 (89%), Gaps = 1/66 (1%) Strand = Plus / Minus Query: 506 ggcaatgctatttgcactccagcaatagaaggaacgatactgcctggtatcacaagggaa 565 ||||||| ||||| |||||||||||| ||||||| |||||||||||||| |||| |||| Sbjct: 82659 ggcaatgttatttctactccagcaataaaaggaaccatactgcctggtataacaa-ggaa 82601 Query: 566 aagtat 571 |||||| Sbjct: 82600 aagtat 82595
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 157 bits (79), Expect = 5e-35 Identities = 97/103 (94%) Strand = Plus / Minus Query: 288 aggaaggtttagctcctattaacttgattattgaagataactttcaccgtgcggcccctg 347 ||||||||||||| ||||||||||||||||| ||||| |||||||||||||| ||||||| Sbjct: 356171 aggaaggtttagcccctattaacttgattatagaagaaaactttcaccgtgctgcccctg 356112 Query: 348 gtggaactggaggcgtgaaaaccattggaaactatgcctcggt 390 |||||||||| || ||||||||||||||||||||||||||||| Sbjct: 356111 gtggaactggcggagtgaaaaccattggaaactatgcctcggt 356069 Score = 117 bits (59), Expect = 5e-23 Identities = 106/122 (86%) Strand = Plus / Minus Query: 38 cgtccggnggagaatgccgtacggatgaagaatggttcagataggatgtgcatgcctgca 97 ||||||| |||||||||| || |||||| |||||| |||| |||||||| ||||||||| Sbjct: 356770 cgtccggaggagaatgccataaggatgagaaatggtgcagagaggatgtgtatgcctgca 356711 Query: 98 ccgactgttgagcagttcgtggacgcagtgaaacaaaccgttttggcaaataaaagatgg 157 || ||| |||| || || ||||| ||||| || ||||||||||||||||||||||||||| Sbjct: 356710 ccaactcttgaacaatttgtggatgcagtaaagcaaaccgttttggcaaataaaagatgg 356651 Query: 158 gt 159 || Sbjct: 356650 gt 356649 Score = 111 bits (56), Expect = 3e-21 Identities = 98/112 (87%) Strand = Plus / Minus Query: 395 aaagcacagagaaccgcaaaggagaaaggatattctgatgtcctctatttggacgccgtt 454 ||||||||||| | ||||| ||||||||||||| |||||||||||| | || |||||| Sbjct: 355516 aaagcacagaggattgcaaaacagaaaggatattcagatgtcctctatctagatgccgtt 355457 Query: 455 cacaacaaatatctggaagaagtttcttcgtgcaatattttcgttgtgaaag 506 ||||| ||||||||||||||||| |||||||||||||| || ||||||||| Sbjct: 355456 cacaagaaatatctggaagaagtgtcttcgtgcaatatctttattgtgaaag 355405 Score = 107 bits (54), Expect = 4e-20 Identities = 114/134 (85%) Strand = Plus / Minus Query: 157 ggtgcctcctactggtaaaggttccttgtatatcaggccactacttattggaagcggggc 216 |||||| || || |||||||| ||| ||||||| ||||| || ||||| ||||| || || Sbjct: 356548 ggtgcccccaaccggtaaaggctccctgtatataaggccgctgcttatgggaagtggagc 356489 Query: 217 tattcttggtcttgcacctgctcctgagtacaccttccttatttatgtctcacctgttgg 276 | | |||||||||||||||||||||||||| ||||| | |||| |||||| |||||||| Sbjct: 356488 tgtccttggtcttgcacctgctcctgagtatacctttatgatttttgtctcccctgttgg 356429 Query: 277 aaactatttcaagg 290 ||||||||||||| Sbjct: 356428 gaactatttcaagg 356415 Score = 67.9 bits (34), Expect = 4e-08 Identities = 59/66 (89%), Gaps = 1/66 (1%) Strand = Plus / Minus Query: 506 ggcaatgctatttgcactccagcaatagaaggaacgatactgcctggtatcacaagggaa 565 ||||||| ||||| |||||||||||| ||||||| |||||||||||||| |||| |||| Sbjct: 355129 ggcaatgttatttctactccagcaataaaaggaaccatactgcctggtataacaa-ggaa 355071 Query: 566 aagtat 571 |||||| Sbjct: 355070 aagtat 355065
>gb|AF193846.1|AF193846 Solanum tuberosum branched-chain amino acid aminotransferase (BCAT2) mRNA, complete cds Length = 1700 Score = 139 bits (70), Expect = 1e-29 Identities = 244/302 (80%) Strand = Plus / Plus Query: 83 atgtgcatgcctgcaccgactgttgagcagttcgtggacgcagtgaaacaaaccgttttg 142 ||||| |||||| ||||| ||||||| ||||| ||||| ||||||||| || ||||| Sbjct: 724 atgtgtatgccttcaccgtctgttgaacagtttgtggaagcagtgaaagccactgtttta 783 Query: 143 gcaaataaaagatgggtgcctcctactggtaaaggttccttgtatatcaggccactactt 202 || ||| |||||||| | |||||| | |||||||| || || || || || || || ||| Sbjct: 784 gctaatgaaagatggattcctcctcccggtaaaggctcattatacataagacctctgctt 843 Query: 203 attggaagcggggctattcttggtcttgcacctgctcctgagtacaccttccttatttat 262 || || || || ||| | ||||||||||| ||||||||||||||||| ||||| |||||| Sbjct: 844 atggggagtggagctgtccttggtcttgctcctgctcctgagtacacattcctgatttat 903 Query: 263 gtctcacctgttggaaactatttcaaggaaggtttagctcctattaacttgattattgaa 322 || |||||||||||||| ||||| ||||||||||| || || ||||| ||| | ||||| Sbjct: 904 gtgtcacctgttggaaattattttaaggaaggtttggcaccaattaatttggtaattgag 963 Query: 323 gataactttcaccgtgcggcccctggtggaactggaggcgtgaaaaccattggaaactat 382 | | | |||||||| | |||||||| ||||||||||| || || |||||||| ||| Sbjct: 964 actgaaatgcaccgtgcaacacctggtggcactggaggcgtcaagactattggaaattat 1023 Query: 383 gc 384 || Sbjct: 1024 gc 1025
>gb|AF193845.1|AF193845 Solanum tuberosum branched-chain amino acid aminotransferase (BCAT1) mRNA, complete cds Length = 1683 Score = 123 bits (62), Expect = 7e-25 Identities = 173/210 (82%) Strand = Plus / Plus Query: 86 tgcatgcctgcaccgactgttgagcagttcgtggacgcagtgaaacaaaccgttttggca 145 ||||||||| |||| ||||||| ||||| ||||| ||||| ||| || ||||| ||| Sbjct: 626 tgcatgccttcaccatctgttgaacagtttgtggaagcagtaaaagccactgttttagca 685 Query: 146 aataaaagatgggtgcctcctactggtaaaggttccttgtatatcaggccactacttatt 205 ||| |||||||| | ||||| | ||||||||||| || || || || ||||| ||||| Sbjct: 686 aatgaaagatggattcctccaccaggtaaaggttcattatacataagaccactgcttatg 745 Query: 206 ggaagcggggctattcttggtcttgcacctgctcctgagtacaccttccttatttatgtc 265 || || || |||||||||||| |||| || |||||||||||||| ||||| |||||||| Sbjct: 746 gggagtggagctattcttggtgttgctccagctcctgagtacacattcctgatttatgta 805 Query: 266 tcacctgttggaaactatttcaaggaaggt 295 |||||||| ||||| ||||| ||||||||| Sbjct: 806 tcacctgtgggaaattattttaaggaaggt 835
>gb|AC144735.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0001A14, complete sequence Length = 129292 Score = 99.6 bits (50), Expect = 1e-17 Identities = 107/126 (84%) Strand = Plus / Plus Query: 157 ggtgcctcctactggtaaaggttccttgtatatcaggccactacttattggaagcggggc 216 |||||||||||| ||||||||||| |||||||| || || ||||| || || || || || Sbjct: 28338 ggtgcctcctaccggtaaaggttctttgtatattagaccgctactcatgggtagtggtgc 28397 Query: 217 tattcttggtcttgcacctgctcctgagtacaccttccttatttatgtctcacctgttgg 276 | |||||||||||||||||||||||||||| || ||| |||| | |||||| ||||| || Sbjct: 28398 tgttcttggtcttgcacctgctcctgagtatacgttcattatatttgtctcgcctgtggg 28457 Query: 277 aaacta 282 ||||| Sbjct: 28458 gaacta 28463 Score = 93.7 bits (47), Expect = 7e-16 Identities = 89/103 (86%) Strand = Plus / Plus Query: 288 aggaaggtttagctcctattaacttgattattgaagataactttcaccgtgcggcccctg 347 |||||||||||||||| || || ||||| |||||||||| ||||| ||||| |||||| Sbjct: 28740 aggaaggtttagctccaataaatttgatagttgaagataagtttcatcgtgcaacccctg 28799 Query: 348 gtggaactggaggcgtgaaaaccattggaaactatgcctcggt 390 ||||||||||| | ||||| ||||| ||||| ||||||||||| Sbjct: 28800 gtggaactggaagtgtgaagaccataggaaattatgcctcggt 28842 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 425 tattctgatgtcctctatttggacgccgttcacaacaaatatctggaagaagtttcttcg 484 ||||||||||| ||||| ||||| || |||||||| || ||||| |||||||||||||| Sbjct: 29290 tattctgatgttctctacttggatgctgttcacaaaaagtatcttgaagaagtttcttca 29349 Query: 485 tgcaatattttcgttgt 501 || |||||||| ||||| Sbjct: 29350 tgtaatatttttgttgt 29366 Score = 67.9 bits (34), Expect = 4e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 83 atgtgcatgcctgcaccgactgttgagcagttcgtggacgcagtgaaacaaaccgttttg 142 |||||||||||||| || | |||||||||||| ||||| ||||| || ||||| ||||| Sbjct: 28169 atgtgcatgcctgcgcctagtgttgagcagtttgtggatgcagtaaagcaaactgtttta 28228 Query: 143 gcaaataaaagatgggtg 160 ||||| || ||||||||| Sbjct: 28229 gcaaacaagagatgggtg 28246 Score = 46.1 bits (23), Expect = 0.14 Identities = 48/55 (87%), Gaps = 1/55 (1%) Strand = Plus / Plus Query: 521 actccagcaatagaaggaacgatactgcctggtatcacaagggaaaagtatcatt 575 ||||||||| || ||||||| ||| |||| || ||||||||| |||||||||||| Sbjct: 30219 actccagcagtaaaaggaacaatattgccaggcatcacaagg-aaaagtatcatt 30272
>gb|AC020666.8| Oryza sativa chromosome 10 BAC OSJNBa0082M15 genomic sequence, complete sequence Length = 158550 Score = 99.6 bits (50), Expect = 1e-17 Identities = 107/126 (84%) Strand = Plus / Minus Query: 157 ggtgcctcctactggtaaaggttccttgtatatcaggccactacttattggaagcggggc 216 |||||||||||| ||||||||||| || ||||| || || |||||||| || || || || Sbjct: 62110 ggtgcctcctaccggtaaaggttctttatatattagaccgctacttatgggtagtggtgc 62051 Query: 217 tattcttggtcttgcacctgctcctgagtacaccttccttatttatgtctcacctgttgg 276 | |||||||||||||||||||||||||||| || ||| |||| | |||||| ||||| || Sbjct: 62050 tgttcttggtcttgcacctgctcctgagtatacgttcattatatttgtctcccctgtggg 61991 Query: 277 aaacta 282 ||||| Sbjct: 61990 gaacta 61985 Score = 93.7 bits (47), Expect = 7e-16 Identities = 89/103 (86%) Strand = Plus / Minus Query: 288 aggaaggtttagctcctattaacttgattattgaagataactttcaccgtgcggcccctg 347 |||||||||||||||| || || ||||| |||||||||| ||||| ||||| |||||| Sbjct: 61707 aggaaggtttagctccaataaatttgatagttgaagataagtttcatcgtgcaacccctg 61648 Query: 348 gtggaactggaggcgtgaaaaccattggaaactatgcctcggt 390 ||||||||||| | ||||| ||||| ||||| ||||||||||| Sbjct: 61647 gtggaactggaagtgtgaagaccataggaaattatgcctcggt 61605 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 425 tattctgatgtcctctatttggacgccgttcacaacaaatatctggaagaagtttcttcg 484 ||||||||||| ||||| ||||| || |||||||| || ||||| |||||||||||||| Sbjct: 61162 tattctgatgttctctacttggatgctgttcacaaaaagtatcttgaagaagtttcttca 61103 Query: 485 tgcaatattttcgttgt 501 || |||||||| ||||| Sbjct: 61102 tgtaatatttttgttgt 61086 Score = 60.0 bits (30), Expect = 9e-06 Identities = 66/78 (84%) Strand = Plus / Minus Query: 83 atgtgcatgcctgcaccgactgttgagcagttcgtggacgcagtgaaacaaaccgttttg 142 |||||||||||||| || | |||||||||||| ||||| ||||| || || || ||||| Sbjct: 62279 atgtgcatgcctgcgcctagtgttgagcagtttgtggatgcagtaaagcagactgtttta 62220 Query: 143 gcaaataaaagatgggtg 160 ||||| || ||||||||| Sbjct: 62219 gcaaacaagagatgggtg 62202 Score = 46.1 bits (23), Expect = 0.14 Identities = 48/55 (87%), Gaps = 1/55 (1%) Strand = Plus / Minus Query: 521 actccagcaatagaaggaacgatactgcctggtatcacaagggaaaagtatcatt 575 ||||||||| || ||||||| ||| |||| || ||||||||| |||||||||||| Sbjct: 59965 actccagcagtaaaaggaacaatattgccaggcatcacaagg-aaaagtatcatt 59912
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 99.6 bits (50), Expect = 1e-17 Identities = 107/126 (84%) Strand = Plus / Plus Query: 157 ggtgcctcctactggtaaaggttccttgtatatcaggccactacttattggaagcggggc 216 |||||||||||| ||||||||||| || ||||| || || |||||||| || || || || Sbjct: 21002281 ggtgcctcctaccggtaaaggttctttatatattagaccgctacttatgggtagtggtgc 21002340 Query: 217 tattcttggtcttgcacctgctcctgagtacaccttccttatttatgtctcacctgttgg 276 | |||||||||||||||||||||||||||| || ||| |||| | |||||| ||||| || Sbjct: 21002341 tgttcttggtcttgcacctgctcctgagtatacgttcattatatttgtctcccctgtggg 21002400 Query: 277 aaacta 282 ||||| Sbjct: 21002401 gaacta 21002406 Score = 93.7 bits (47), Expect = 7e-16 Identities = 89/103 (86%) Strand = Plus / Plus Query: 288 aggaaggtttagctcctattaacttgattattgaagataactttcaccgtgcggcccctg 347 |||||||||||||||| || || ||||| |||||||||| ||||| ||||| |||||| Sbjct: 21002684 aggaaggtttagctccaataaatttgatagttgaagataagtttcatcgtgcaacccctg 21002743 Query: 348 gtggaactggaggcgtgaaaaccattggaaactatgcctcggt 390 ||||||||||| | ||||| ||||| ||||| ||||||||||| Sbjct: 21002744 gtggaactggaagtgtgaagaccataggaaattatgcctcggt 21002786 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 425 tattctgatgtcctctatttggacgccgttcacaacaaatatctggaagaagtttcttcg 484 ||||||||||| ||||| ||||| || |||||||| || ||||| |||||||||||||| Sbjct: 21003229 tattctgatgttctctacttggatgctgttcacaaaaagtatcttgaagaagtttcttca 21003288 Query: 485 tgcaatattttcgttgt 501 || |||||||| ||||| Sbjct: 21003289 tgtaatatttttgttgt 21003305 Score = 60.0 bits (30), Expect = 9e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 83 atgtgcatgcctgcaccgactgttgagcagttcgtggacgcagtgaaacaaaccgttttg 142 |||||||||||||| || | |||||||||||| ||||| ||||| || || || ||||| Sbjct: 21002112 atgtgcatgcctgcgcctagtgttgagcagtttgtggatgcagtaaagcagactgtttta 21002171 Query: 143 gcaaataaaagatgggtg 160 ||||| || ||||||||| Sbjct: 21002172 gcaaacaagagatgggtg 21002189 Score = 46.1 bits (23), Expect = 0.14 Identities = 48/55 (87%), Gaps = 1/55 (1%) Strand = Plus / Plus Query: 521 actccagcaatagaaggaacgatactgcctggtatcacaagggaaaagtatcatt 575 ||||||||| || ||||||| ||| |||| || ||||||||| |||||||||||| Sbjct: 21004426 actccagcagtaaaaggaacaatattgccaggcatcacaagg-aaaagtatcatt 21004479
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 99.6 bits (50), Expect = 1e-17 Identities = 107/126 (84%) Strand = Plus / Plus Query: 157 ggtgcctcctactggtaaaggttccttgtatatcaggccactacttattggaagcggggc 216 |||||||||||| ||||||||||| |||||||| || || ||||| || || || || || Sbjct: 27561062 ggtgcctcctaccggtaaaggttctttgtatattagaccgctactcatgggtagtggtgc 27561121 Query: 217 tattcttggtcttgcacctgctcctgagtacaccttccttatttatgtctcacctgttgg 276 | |||||||||||||||||||||||||||| || ||| |||| | |||||| ||||| || Sbjct: 27561122 tgttcttggtcttgcacctgctcctgagtatacgttcattatatttgtctcgcctgtggg 27561181 Query: 277 aaacta 282 ||||| Sbjct: 27561182 gaacta 27561187 Score = 93.7 bits (47), Expect = 7e-16 Identities = 89/103 (86%) Strand = Plus / Plus Query: 288 aggaaggtttagctcctattaacttgattattgaagataactttcaccgtgcggcccctg 347 |||||||||||||||| || || ||||| |||||||||| ||||| ||||| |||||| Sbjct: 27561464 aggaaggtttagctccaataaatttgatagttgaagataagtttcatcgtgcaacccctg 27561523 Query: 348 gtggaactggaggcgtgaaaaccattggaaactatgcctcggt 390 ||||||||||| | ||||| ||||| ||||| ||||||||||| Sbjct: 27561524 gtggaactggaagtgtgaagaccataggaaattatgcctcggt 27561566 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 425 tattctgatgtcctctatttggacgccgttcacaacaaatatctggaagaagtttcttcg 484 ||||||||||| ||||| ||||| || |||||||| || ||||| |||||||||||||| Sbjct: 27562014 tattctgatgttctctacttggatgctgttcacaaaaagtatcttgaagaagtttcttca 27562073 Query: 485 tgcaatattttcgttgt 501 || |||||||| ||||| Sbjct: 27562074 tgtaatatttttgttgt 27562090 Score = 67.9 bits (34), Expect = 4e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 83 atgtgcatgcctgcaccgactgttgagcagttcgtggacgcagtgaaacaaaccgttttg 142 |||||||||||||| || | |||||||||||| ||||| ||||| || ||||| ||||| Sbjct: 27560893 atgtgcatgcctgcgcctagtgttgagcagtttgtggatgcagtaaagcaaactgtttta 27560952 Query: 143 gcaaataaaagatgggtg 160 ||||| || ||||||||| Sbjct: 27560953 gcaaacaagagatgggtg 27560970 Score = 46.1 bits (23), Expect = 0.14 Identities = 48/55 (87%), Gaps = 1/55 (1%) Strand = Plus / Plus Query: 521 actccagcaatagaaggaacgatactgcctggtatcacaagggaaaagtatcatt 575 ||||||||| || ||||||| ||| |||| || ||||||||| |||||||||||| Sbjct: 27562943 actccagcagtaaaaggaacaatattgccaggcatcacaagg-aaaagtatcatt 27562996
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 99.6 bits (50), Expect = 1e-17 Identities = 107/126 (84%) Strand = Plus / Plus Query: 157 ggtgcctcctactggtaaaggttccttgtatatcaggccactacttattggaagcggggc 216 |||||||||||| ||||||||||| || ||||| || || |||||||| || || || || Sbjct: 21013545 ggtgcctcctaccggtaaaggttctttatatattagaccgctacttatgggtagtggtgc 21013604 Query: 217 tattcttggtcttgcacctgctcctgagtacaccttccttatttatgtctcacctgttgg 276 | |||||||||||||||||||||||||||| || ||| |||| | |||||| ||||| || Sbjct: 21013605 tgttcttggtcttgcacctgctcctgagtatacgttcattatatttgtctcccctgtggg 21013664 Query: 277 aaacta 282 ||||| Sbjct: 21013665 gaacta 21013670 Score = 93.7 bits (47), Expect = 7e-16 Identities = 89/103 (86%) Strand = Plus / Plus Query: 288 aggaaggtttagctcctattaacttgattattgaagataactttcaccgtgcggcccctg 347 |||||||||||||||| || || ||||| |||||||||| ||||| ||||| |||||| Sbjct: 21013948 aggaaggtttagctccaataaatttgatagttgaagataagtttcatcgtgcaacccctg 21014007 Query: 348 gtggaactggaggcgtgaaaaccattggaaactatgcctcggt 390 ||||||||||| | ||||| ||||| ||||| ||||||||||| Sbjct: 21014008 gtggaactggaagtgtgaagaccataggaaattatgcctcggt 21014050 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 425 tattctgatgtcctctatttggacgccgttcacaacaaatatctggaagaagtttcttcg 484 ||||||||||| ||||| ||||| || |||||||| || ||||| |||||||||||||| Sbjct: 21014493 tattctgatgttctctacttggatgctgttcacaaaaagtatcttgaagaagtttcttca 21014552 Query: 485 tgcaatattttcgttgt 501 || |||||||| ||||| Sbjct: 21014553 tgtaatatttttgttgt 21014569 Score = 60.0 bits (30), Expect = 9e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 83 atgtgcatgcctgcaccgactgttgagcagttcgtggacgcagtgaaacaaaccgttttg 142 |||||||||||||| || | |||||||||||| ||||| ||||| || || || ||||| Sbjct: 21013376 atgtgcatgcctgcgcctagtgttgagcagtttgtggatgcagtaaagcagactgtttta 21013435 Query: 143 gcaaataaaagatgggtg 160 ||||| || ||||||||| Sbjct: 21013436 gcaaacaagagatgggtg 21013453 Score = 46.1 bits (23), Expect = 0.14 Identities = 48/55 (87%), Gaps = 1/55 (1%) Strand = Plus / Plus Query: 521 actccagcaatagaaggaacgatactgcctggtatcacaagggaaaagtatcatt 575 ||||||||| || ||||||| ||| |||| || ||||||||| |||||||||||| Sbjct: 21015690 actccagcagtaaaaggaacaatattgccaggcatcacaagg-aaaagtatcatt 21015743
>ref|NM_125975.2| Arabidopsis thaliana branched-chain-amino-acid transaminase/ catalytic AT5G65780 mRNA, complete cds Length = 2275 Score = 81.8 bits (41), Expect = 3e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 219 ttcttggtcttgcacctgctcctgagtacaccttccttatttatgtctcacctgttggaa 278 ||||||||||||| ||||||||||| ||||| |||||||| | ||| |||||||| || | Sbjct: 1493 ttcttggtcttgctcctgctcctgaatacactttccttatctttgtttcacctgtcggga 1552 Query: 279 actatttcaaggaaggt 295 |||| |||||||||||| Sbjct: 1553 actacttcaaggaaggt 1569 Score = 48.1 bits (24), Expect = 0.035 Identities = 45/52 (86%) Strand = Plus / Plus Query: 453 ttcacaacaaatatctggaagaagtttcttcgtgcaatattttcgttgtgaa 504 ||||||| | |||||| || || ||||| ||||||||||||||| ||||||| Sbjct: 1727 ttcacaaaagatatcttgaggaggtttcatcgtgcaatattttcattgtgaa 1778
>emb|AJ293804.1|ATH293804 Arabidopsis thaliana mRNA for branched-chain amino acid transaminase 5 (bcat5 gene) Length = 1973 Score = 81.8 bits (41), Expect = 3e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 219 ttcttggtcttgcacctgctcctgagtacaccttccttatttatgtctcacctgttggaa 278 ||||||||||||| ||||||||||| ||||| |||||||| | ||| |||||||| || | Sbjct: 1205 ttcttggtcttgctcctgctcctgaatacactttccttatctttgtttcacctgtcggga 1264 Query: 279 actatttcaaggaaggt 295 |||| |||||||||||| Sbjct: 1265 actacttcaaggaaggt 1281 Score = 48.1 bits (24), Expect = 0.035 Identities = 45/52 (86%) Strand = Plus / Plus Query: 453 ttcacaacaaatatctggaagaagtttcttcgtgcaatattttcgttgtgaa 504 ||||||| | |||||| || || ||||| ||||||||||||||| ||||||| Sbjct: 1439 ttcacaaaagatatcttgaggaggtttcatcgtgcaatattttcattgtgaa 1490
>emb|BX831860.1|CNS09ZQO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH35ZC09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1362 Score = 81.8 bits (41), Expect = 3e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 219 ttcttggtcttgcacctgctcctgagtacaccttccttatttatgtctcacctgttggaa 278 ||||||||||||| ||||||||||| ||||| |||||||| | ||| |||||||| || | Sbjct: 653 ttcttggtcttgctcctgctcctgaatacactttccttatctttgtttcacctgtcggga 712 Query: 279 actatttcaaggaaggt 295 |||| |||||||||||| Sbjct: 713 actacttcaaggaaggt 729 Score = 48.1 bits (24), Expect = 0.035 Identities = 45/52 (86%) Strand = Plus / Plus Query: 453 ttcacaacaaatatctggaagaagtttcttcgtgcaatattttcgttgtgaa 504 ||||||| | |||||| || || ||||| ||||||||||||||| ||||||| Sbjct: 887 ttcacaaaagatatcttgaggaggtttcatcgtgcaatattttcattgtgaa 938
>emb|BX831246.1|CNS09ZFV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS71ZC11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1398 Score = 81.8 bits (41), Expect = 3e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 219 ttcttggtcttgcacctgctcctgagtacaccttccttatttatgtctcacctgttggaa 278 ||||||||||||| ||||||||||| ||||| |||||||| | ||| |||||||| || | Sbjct: 653 ttcttggtcttgctcctgctcctgaatacactttccttatctttgtttcacctgtcggga 712 Query: 279 actatttcaaggaaggt 295 |||| |||||||||||| Sbjct: 713 actacttcaaggaaggt 729 Score = 48.1 bits (24), Expect = 0.035 Identities = 45/52 (86%) Strand = Plus / Plus Query: 453 ttcacaacaaatatctggaagaagtttcttcgtgcaatattttcgttgtgaa 504 ||||||| | |||||| || || ||||| ||||||||||||||| ||||||| Sbjct: 887 ttcacaaaagatatcttgaggaggtttcatcgtgcaatattttcattgtgaa 938
>emb|BX831049.1|CNS09ZFT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS53ZC10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1320 Score = 81.8 bits (41), Expect = 3e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 219 ttcttggtcttgcacctgctcctgagtacaccttccttatttatgtctcacctgttggaa 278 ||||||||||||| ||||||||||| ||||| |||||||| | ||| |||||||| || | Sbjct: 653 ttcttggtcttgctcctgctcctgaatacactttccttatctttgtttcacctgtcggga 712 Query: 279 actatttcaaggaaggt 295 |||| |||||||||||| Sbjct: 713 actacttcaaggaaggt 729 Score = 48.1 bits (24), Expect = 0.035 Identities = 45/52 (86%) Strand = Plus / Plus Query: 453 ttcacaacaaatatctggaagaagtttcttcgtgcaatattttcgttgtgaa 504 ||||||| | |||||| || || ||||| ||||||||||||||| ||||||| Sbjct: 887 ttcacaaaagatatcttgaggaggtttcatcgtgcaatattttcattgtgaa 938
>emb|CT573020.1| Medicago truncatula chromosome 5 clone mth2-83i12, COMPLETE SEQUENCE Length = 92109 Score = 81.8 bits (41), Expect = 3e-12 Identities = 101/121 (83%) Strand = Plus / Plus Query: 170 ggtaaaggttccttgtatatcaggccactacttattggaagcggggctattcttggtctt 229 ||||||||||| |||||||| || || | || || ||||| || ||| | ||||| ||| Sbjct: 76223 ggtaaaggttcattgtatattagacctttgctaatgggaagtggagctgtacttgggctt 76282 Query: 230 gcacctgctcctgagtacaccttccttatttatgtctcacctgttggaaactatttcaag 289 ||||||||||| ||||||||||| || || ||||| ||||||||||| ||||| |||||| Sbjct: 76283 gcacctgctccagagtacacctttctaatatatgtttcacctgttgggaactacttcaag 76342 Query: 290 g 290 | Sbjct: 76343 g 76343 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 347 ggtggaactggaggcgtgaaaaccattggaaactatgc 384 ||||| |||||||| ||||| ||||||||||||||||| Sbjct: 77983 ggtggcactggaggtgtgaagaccattggaaactatgc 78020
>dbj|AP006101.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT09A07, TM0181, complete sequence Length = 185320 Score = 81.8 bits (41), Expect = 3e-12 Identities = 95/113 (84%) Strand = Plus / Minus Query: 170 ggtaaaggttccttgtatatcaggccactacttattggaagcggggctattcttggtctt 229 |||||||| ||||||||||| || ||| | || || ||||| || || | ||||||||| Sbjct: 15197 ggtaaaggctccttgtatattagaccattgctaatgggaagtggacctgtacttggtctt 15138 Query: 230 gcacctgctcctgagtacaccttccttatttatgtctcacctgttggaaacta 282 ||||||||||| ||||||||||| || || ||||| ||||||||||| ||||| Sbjct: 15137 gcacctgctccggagtacacctttctaatatatgtttcacctgttgggaacta 15085 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Minus Query: 81 ggatgtgcatgcctgcaccgactgttgagcagttcgtggacgcagtgaaacaaaccgttt 140 |||||||||||||| |||| || || |||||||| ||||| || ||||| | || |||| Sbjct: 15372 ggatgtgcatgccttcacctaccgtggagcagtttgtggaagctgtgaaggagactgttt 15313 Query: 141 tggcaaataaa 151 | ||||||||| Sbjct: 15312 tagcaaataaa 15302
>ref|NM_114828.3| Arabidopsis thaliana branched-chain-amino-acid transaminase/ catalytic AT3G49680 mRNA, complete cds Length = 1567 Score = 73.8 bits (37), Expect = 6e-10 Identities = 229/293 (78%) Strand = Plus / Plus Query: 80 aggatgtgcatgcctgcaccgactgttgagcagttcgtggacgcagtgaaacaaaccgtt 139 |||||||| |||||||| || || ||||||||||| || || || |||| | |||| || Sbjct: 599 aggatgtgtatgcctgctccaaccgttgagcagtttgtagaagctgtgacagaaactgta 658 Query: 140 ttggcaaataaaagatgggtgcctcctactggtaaaggttccttgtatatcaggccacta 199 | ||||| ||| | ||||| || || | |||||||||||||| ||| | || ||| | Sbjct: 659 ctagcaaacaaacgttgggttccaccaccaggtaaaggttccttatatgttagaccattg 718 Query: 200 cttattggaagcggggctattcttggtcttgcacctgctcctgagtacaccttccttatt 259 || || |||| || ||| ||||||||||||| ||||| || || || || ||| |||| Sbjct: 719 ctaatgggaacaggagctgttcttggtcttgcgcctgcaccagaatatactttcattatc 778 Query: 260 tatgtctcacctgttggaaactatttcaaggaaggtttagctcctattaacttgattatt 319 ||||| || |||||||| ||||| |||||||||||| | || ||||| || |||||| | Sbjct: 779 tatgtttcgcctgttgggaactacttcaaggaaggtgtggcacctatcaatttgattgtg 838 Query: 320 gaagataactttcaccgtgcggcccctggtggaactggaggcgtgaaaaccat 372 || || | ||||||||||| | |||||||| || ||||| || |||||||| Sbjct: 839 gagaatgaatttcaccgtgcaactcctggtggtaccggaggtgttaaaaccat 891
>emb|AJ276124.1|ATH276124 Arabidopsis thaliana mRNA for branched-chain amino acid transaminase 3 (bcat3 gene) Length = 1539 Score = 73.8 bits (37), Expect = 6e-10 Identities = 229/293 (78%) Strand = Plus / Plus Query: 80 aggatgtgcatgcctgcaccgactgttgagcagttcgtggacgcagtgaaacaaaccgtt 139 |||||||| |||||||| || || ||||||||||| || || || |||| | |||| || Sbjct: 583 aggatgtgtatgcctgctccaaccgttgagcagtttgtagaagctgtgacagaaactgta 642 Query: 140 ttggcaaataaaagatgggtgcctcctactggtaaaggttccttgtatatcaggccacta 199 | ||||| ||| | ||||| || || | |||||||||||||| ||| | || ||| | Sbjct: 643 ctagcaaacaaacgttgggttccaccaccaggtaaaggttccttatatgttagaccattg 702 Query: 200 cttattggaagcggggctattcttggtcttgcacctgctcctgagtacaccttccttatt 259 || || |||| || ||| ||||||||||||| ||||| || || || || ||| |||| Sbjct: 703 ctaatgggaacaggagctgttcttggtcttgcgcctgcaccagaatatactttcattatc 762 Query: 260 tatgtctcacctgttggaaactatttcaaggaaggtttagctcctattaacttgattatt 319 ||||| || |||||||| ||||| |||||||||||| | || ||||| || |||||| | Sbjct: 763 tatgtttcgcctgttgggaactacttcaaggaaggtgtggcacctatcaatttgattgtg 822 Query: 320 gaagataactttcaccgtgcggcccctggtggaactggaggcgtgaaaaccat 372 || || | ||||||||||| | |||||||| || ||||| || |||||||| Sbjct: 823 gagaatgaatttcaccgtgcaactcctggtggtaccggaggtgttaaaaccat 875
>gb|AY097417.1| Arabidopsis thaliana AT3g49680/T16K5_30 mRNA, complete cds Length = 1242 Score = 73.8 bits (37), Expect = 6e-10 Identities = 229/293 (78%) Strand = Plus / Plus Query: 80 aggatgtgcatgcctgcaccgactgttgagcagttcgtggacgcagtgaaacaaaccgtt 139 |||||||| |||||||| || || ||||||||||| || || || |||| | |||| || Sbjct: 490 aggatgtgtatgcctgctccaaccgttgagcagtttgtagaagctgtgacagaaactgta 549 Query: 140 ttggcaaataaaagatgggtgcctcctactggtaaaggttccttgtatatcaggccacta 199 | ||||| ||| | ||||| || || | |||||||||||||| ||| | || ||| | Sbjct: 550 ctagcaaacaaacgttgggttccaccaccaggtaaaggttccttatatgttagaccattg 609 Query: 200 cttattggaagcggggctattcttggtcttgcacctgctcctgagtacaccttccttatt 259 || || |||| || ||| ||||||||||||| ||||| || || || || ||| |||| Sbjct: 610 ctaatgggaacaggagctgttcttggtcttgcgcctgcaccagaatatactttcattatc 669 Query: 260 tatgtctcacctgttggaaactatttcaaggaaggtttagctcctattaacttgattatt 319 ||||| || |||||||| ||||| |||||||||||| | || ||||| || |||||| | Sbjct: 670 tatgtttcgcctgttgggaactacttcaaggaaggtgtggcacctatcaatttgattgtg 729 Query: 320 gaagataactttcaccgtgcggcccctggtggaactggaggcgtgaaaaccat 372 || || | ||||||||||| | |||||||| || ||||| || |||||||| Sbjct: 730 gagaatgaatttcaccgtgcaactcctggtggtaccggaggtgttaaaaccat 782
>gb|AF446355.1|AF446355 Arabidopsis thaliana AT3g49680/T16K5_30 mRNA, complete cds Length = 1511 Score = 73.8 bits (37), Expect = 6e-10 Identities = 229/293 (78%) Strand = Plus / Plus Query: 80 aggatgtgcatgcctgcaccgactgttgagcagttcgtggacgcagtgaaacaaaccgtt 139 |||||||| |||||||| || || ||||||||||| || || || |||| | |||| || Sbjct: 581 aggatgtgtatgcctgctccaaccgttgagcagtttgtagaagctgtgacagaaactgta 640 Query: 140 ttggcaaataaaagatgggtgcctcctactggtaaaggttccttgtatatcaggccacta 199 | ||||| ||| | ||||| || || | |||||||||||||| ||| | || ||| | Sbjct: 641 ctagcaaacaaacgttgggttccaccaccaggtaaaggttccttatatgttagaccattg 700 Query: 200 cttattggaagcggggctattcttggtcttgcacctgctcctgagtacaccttccttatt 259 || || |||| || ||| ||||||||||||| ||||| || || || || ||| |||| Sbjct: 701 ctaatgggaacaggagctgttcttggtcttgcgcctgcaccagaatatactttcattatc 760 Query: 260 tatgtctcacctgttggaaactatttcaaggaaggtttagctcctattaacttgattatt 319 ||||| || |||||||| ||||| |||||||||||| | || ||||| || |||||| | Sbjct: 761 tatgtttcgcctgttgggaactacttcaaggaaggtgtggcacctatcaatttgattgtg 820 Query: 320 gaagataactttcaccgtgcggcccctggtggaactggaggcgtgaaaaccat 372 || || | ||||||||||| | |||||||| || ||||| || |||||||| Sbjct: 821 gagaatgaatttcaccgtgcaactcctggtggtaccggaggtgttaaaaccat 873
>emb|BX822562.1|CNS0A630 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB49ZD05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1368 Score = 73.8 bits (37), Expect = 6e-10 Identities = 229/293 (78%) Strand = Plus / Plus Query: 80 aggatgtgcatgcctgcaccgactgttgagcagttcgtggacgcagtgaaacaaaccgtt 139 |||||||| |||||||| || || ||||||||||| || || || |||| | |||| || Sbjct: 480 aggatgtgtatgcctgctccaaccgttgagcagtttgtagaagctgtgacagaaactgta 539 Query: 140 ttggcaaataaaagatgggtgcctcctactggtaaaggttccttgtatatcaggccacta 199 | ||||| ||| | ||||| || || | |||||||||||||| ||| | || ||| | Sbjct: 540 ctagcaaacaaacgttgggttccaccaccaggtaaaggttccttatatgttagaccattg 599 Query: 200 cttattggaagcggggctattcttggtcttgcacctgctcctgagtacaccttccttatt 259 || || |||| || ||| ||||||||||||| ||||| || || || || ||| |||| Sbjct: 600 ctaatgggaacaggagctgttcttggtcttgcgcctgcaccagaatatactttcattatc 659 Query: 260 tatgtctcacctgttggaaactatttcaaggaaggtttagctcctattaacttgattatt 319 ||||| || |||||||| ||||| |||||||||||| | || ||||| || |||||| | Sbjct: 660 tatgtttcgcctgttgggaactacttcaaggaaggtgtggcacctatcaatttgattgtg 719 Query: 320 gaagataactttcaccgtgcggcccctggtggaactggaggcgtgaaaaccat 372 || || | ||||||||||| | |||||||| || ||||| || |||||||| Sbjct: 720 gagaatgaatttcaccgtgcaactcctggtggtaccggaggtgttaaaaccat 772
>gb|AY087619.1| Arabidopsis thaliana clone 37100 mRNA, complete sequence Length = 1544 Score = 73.8 bits (37), Expect = 6e-10 Identities = 229/293 (78%) Strand = Plus / Plus Query: 80 aggatgtgcatgcctgcaccgactgttgagcagttcgtggacgcagtgaaacaaaccgtt 139 |||||||| |||||||| || || ||||||||||| || || || |||| | |||| || Sbjct: 588 aggatgtgtatgcctgctccaaccgttgagcagtttgtagaagctgtgacagaaactgta 647 Query: 140 ttggcaaataaaagatgggtgcctcctactggtaaaggttccttgtatatcaggccacta 199 | ||||| ||| | ||||| || || | |||||||||||||| ||| | || ||| | Sbjct: 648 ctagcaaacaaacgttgggttccaccaccaggtaaaggttccttatatgttagaccattg 707 Query: 200 cttattggaagcggggctattcttggtcttgcacctgctcctgagtacaccttccttatt 259 || || |||| || ||| ||||||||||||| ||||| || || || || ||| |||| Sbjct: 708 ctaatgggaacaggagctgttcttggtcttgcgcctgcaccagaatatactttcattatc 767 Query: 260 tatgtctcacctgttggaaactatttcaaggaaggtttagctcctattaacttgattatt 319 ||||| || |||||||| ||||| |||||||||||| | || ||||| || |||||| | Sbjct: 768 tatgtttcgcctgttgggaactacttcaaggaaggtgtggcacctatcaatttgattgtg 827 Query: 320 gaagataactttcaccgtgcggcccctggtggaactggaggcgtgaaaaccat 372 || || | ||||||||||| | |||||||| || ||||| || |||||||| Sbjct: 828 gagaatgaatttcaccgtgcaactcctggtggtaccggaggtgttaaaaccat 880
>emb|AL021684.1|ATF6H11 Arabidopsis thaliana DNA chromosome 5, BAC clone F6H11 (ESSAII project) Length = 118086 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Minus Query: 219 ttcttggtcttgcacctgctcctgagtacaccttccttatttatgtctcacctgttggaa 278 ||||||||||||| ||||||||||| ||||| |||||||| | ||| |||||||| || | Sbjct: 49953 ttcttggtcttgctcctgctcctgaatacactttccttatctttgtttcacctgtcggga 49894 Query: 279 actatttcaagg 290 |||| ||||||| Sbjct: 49893 actacttcaagg 49882 Score = 48.1 bits (24), Expect = 0.035 Identities = 45/52 (86%) Strand = Plus / Minus Query: 453 ttcacaacaaatatctggaagaagtttcttcgtgcaatattttcgttgtgaa 504 ||||||| | |||||| || || ||||| ||||||||||||||| ||||||| Sbjct: 49556 ttcacaaaagatatcttgaggaggtttcatcgtgcaatattttcattgtgaa 49505
>dbj|AB010075.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MPA24 Length = 84440 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 219 ttcttggtcttgcacctgctcctgagtacaccttccttatttatgtctcacctgttggaa 278 ||||||||||||| ||||||||||| ||||| |||||||| | ||| |||||||| || | Sbjct: 69855 ttcttggtcttgctcctgctcctgaatacactttccttatctttgtttcacctgtcggga 69914 Query: 279 actatttcaagg 290 |||| ||||||| Sbjct: 69915 actacttcaagg 69926 Score = 48.1 bits (24), Expect = 0.035 Identities = 45/52 (86%) Strand = Plus / Plus Query: 453 ttcacaacaaatatctggaagaagtttcttcgtgcaatattttcgttgtgaa 504 ||||||| | |||||| || || ||||| ||||||||||||||| ||||||| Sbjct: 70252 ttcacaaaagatatcttgaggaggtttcatcgtgcaatattttcattgtgaa 70303
>emb|BX824847.1|CNS0A7CH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH77ZA12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1498 Score = 67.9 bits (34), Expect = 4e-08 Identities = 124/154 (80%) Strand = Plus / Plus Query: 219 ttcttggtcttgcacctgctcctgagtacaccttccttatttatgtctcacctgttggaa 278 ||||||||||||| ||||| || || || || ||| |||| ||||| || |||||||| | Sbjct: 709 ttcttggtcttgcgcctgcaccagaatatactttcattatctatgtttcgcctgttggga 768 Query: 279 actatttcaaggaaggtttagctcctattaacttgattattgaagataactttcaccgtg 338 |||| |||||||||||| | || ||||| || |||||| | || || | |||||||||| Sbjct: 769 actacttcaaggaaggtgtggcacctatcaatttgattgtggagaatgaatttcaccgtg 828 Query: 339 cggcccctggtggaactggaggcgtgaaaaccat 372 | | |||||||| || ||||| || |||||||| Sbjct: 829 caactcctggtggtaccggaggtgttaaaaccat 862
>gb|AY034379.1| Capsicum annuum branched-chain amino acid aminotransferase mRNA, complete cds Length = 1398 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 461 aaatatctggaagaagtttcttcgtgcaatattttcgttgtgaaaggcaatg 512 |||||| | |||||||||||||| ||||| ||||||||||| ||||| |||| Sbjct: 853 aaatatattgaagaagtttcttcttgcaacattttcgttgtcaaaggaaatg 904 Score = 40.1 bits (20), Expect = 8.5 Identities = 47/56 (83%) Strand = Plus / Plus Query: 239 cctgagtacaccttccttatttatgtctcacctgttggaaactatttcaaggaagg 294 ||||||||||| |||||| | |||| || ||||| || || |||||||||||||| Sbjct: 631 cctgagtacacattccttgtctatgcctgccctgtgggtaattatttcaaggaagg 686
>emb|AL132964.2|ATT9C5 Arabidopsis thaliana DNA chromosome 3, BAC clone T9C5 Length = 104204 Score = 50.1 bits (25), Expect = 0.009 Identities = 97/121 (80%) Strand = Plus / Plus Query: 170 ggtaaaggttccttgtatatcaggccactacttattggaagcggggctattcttggtctt 229 |||||||||||||| ||| | || ||| | || || |||| || ||| ||||||||||| Sbjct: 99912 ggtaaaggttccttatatgttagaccattgctaatgggaacaggagctgttcttggtctt 99971 Query: 230 gcacctgctcctgagtacaccttccttatttatgtctcacctgttggaaactatttcaag 289 || ||||| || || || || ||| |||| ||||| || |||||||| ||||| |||||| Sbjct: 99972 gcgcctgcaccagaatatactttcattatctatgtttcgcctgttgggaactacttcaag 100031 Query: 290 g 290 | Sbjct: 100032 g 100032
>emb|AL132965.1|ATT16K5 Arabidopsis thaliana DNA chromosome 3, BAC clone T16K5 Length = 97711 Score = 50.1 bits (25), Expect = 0.009 Identities = 97/121 (80%) Strand = Plus / Plus Query: 170 ggtaaaggttccttgtatatcaggccactacttattggaagcggggctattcttggtctt 229 |||||||||||||| ||| | || ||| | || || |||| || ||| ||||||||||| Sbjct: 14012 ggtaaaggttccttatatgttagaccattgctaatgggaacaggagctgttcttggtctt 14071 Query: 230 gcacctgctcctgagtacaccttccttatttatgtctcacctgttggaaactatttcaag 289 || ||||| || || || || ||| |||| ||||| || |||||||| ||||| |||||| Sbjct: 14072 gcgcctgcaccagaatatactttcattatctatgtttcgcctgttgggaactacttcaag 14131 Query: 290 g 290 | Sbjct: 14132 g 14132
>gb|BT009368.1| Triticum aestivum clone wlm96.pk027.n2:fis, full insert mRNA sequence Length = 1514 Score = 48.1 bits (24), Expect = 0.035 Identities = 66/80 (82%) Strand = Plus / Plus Query: 167 actggtaaaggttccttgtatatcaggccactacttattggaagcggggctattcttggt 226 ||||| |||||||| || ||||||||||| || || |||||||| || ||||| || ||| Sbjct: 530 actggcaaaggttctttatatatcaggccgctgctgattggaagtggagctatgctaggt 589 Query: 227 cttgcacctgctcctgagta 246 | |||||||| || ||||| Sbjct: 590 gtagcacctgccccggagta 609
>dbj|AK071103.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023077F14, full insert sequence Length = 883 Score = 46.1 bits (23), Expect = 0.14 Identities = 48/55 (87%), Gaps = 1/55 (1%) Strand = Plus / Plus Query: 521 actccagcaatagaaggaacgatactgcctggtatcacaagggaaaagtatcatt 575 ||||||||| || ||||||| ||| |||| || ||||||||| |||||||||||| Sbjct: 327 actccagcagtaaaaggaacaatattgccaggcatcacaagg-aaaagtatcatt 380
>emb|AL513324.9| Human DNA sequence from clone RP11-355F22 on chromosome 10, complete sequence Length = 131195 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 302 cctattaacttgattattgaa 322 ||||||||||||||||||||| Sbjct: 83427 cctattaacttgattattgaa 83447
>emb|AJ322870.1|HSA322870 Homo sapiens genomic sequence surrounding NotI site, clone NR1-QF1C Length = 624 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 154 atgggtgcctcctactggtaaaggt 178 ||||||||| ||||||||||||||| Sbjct: 525 atgggtgccccctactggtaaaggt 501
>gb|AC166339.4| Mus musculus chromosome 8, clone RP23-274G17, complete sequence Length = 184383 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 536 ggaacgatactgcctggtatcaca 559 ||||||||| |||||||||||||| Sbjct: 90818 ggaacgatagtgcctggtatcaca 90795
>gb|AC107711.13| Mus musculus chromosome 14, clone RP23-291I12, complete sequence Length = 228302 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 caaaggagaaaggatattct 430 |||||||||||||||||||| Sbjct: 207241 caaaggagaaaggatattct 207222
>gb|AC100153.10| Mus musculus chromosome 7, clone RP23-43N3, complete sequence Length = 132518 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 tggttcagataggatgtgca 89 |||||||||||||||||||| Sbjct: 16669 tggttcagataggatgtgca 16650
>gb|AC109583.2| Homo sapiens chromosome 3 clone RP11-427P5, complete sequence Length = 177251 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 328 ctttcaccgtgcggcccctggtgg 351 ||||||||||||| |||||||||| Sbjct: 141609 ctttcaccgtgcgccccctggtgg 141632
>gb|AC112210.2| Homo sapiens chromosome 3 clone RP11-221D23, complete sequence Length = 146699 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 146 aataaaagatgggtgcctcctact 169 ||||||||||| |||||||||||| Sbjct: 46321 aataaaagatgagtgcctcctact 46344
>gb|AC094020.2| Homo sapiens chromosome 3 clone RP11-425J9, complete sequence Length = 194729 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 328 ctttcaccgtgcggcccctggtgg 351 ||||||||||||| |||||||||| Sbjct: 53980 ctttcaccgtgcgccccctggtgg 54003
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 556 cacaagggaaaagtatcatt 575 |||||||||||||||||||| Sbjct: 1185272 cacaagggaaaagtatcatt 1185291
>gb|AC153895.5| Mus musculus 6 BAC RP23-114F22 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 187298 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 agataggatgtgcatgcctg 95 |||||||||||||||||||| Sbjct: 43501 agataggatgtgcatgcctg 43482
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 cggatgaagaatggttcaga 78 |||||||||||||||||||| Sbjct: 25540161 cggatgaagaatggttcaga 25540180
>gb|AC092662.2| Homo sapiens BAC clone RP11-510H11 from 2, complete sequence Length = 198230 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 364 gaaaaccattggaaactatg 383 |||||||||||||||||||| Sbjct: 104626 gaaaaccattggaaactatg 104645
>dbj|AP004367.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0696E01 Length = 194056 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 cggatgaagaatggttcaga 78 |||||||||||||||||||| Sbjct: 67764 cggatgaagaatggttcaga 67783
>emb|AJ504410.1|TRU504410 Takifugu rubripes egln1 gene (partial), trax gene and disc1 gene Length = 44904 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 255 ttatttatgtctcacctgttggaa 278 ||||||||||| |||||||||||| Sbjct: 12473 ttatttatgtcgcacctgttggaa 12496
>emb|BX005469.9| Mouse DNA sequence from clone RP23-218K9 on chromosome X, complete sequence Length = 121341 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 515 atttgcactccagcaataga 534 |||||||||||||||||||| Sbjct: 6834 atttgcactccagcaataga 6815
>gb|AC138293.11| Mus musculus chromosome 18, clone RP23-33P24, complete sequence Length = 235495 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 tgcctggtatcacaagggaa 565 |||||||||||||||||||| Sbjct: 161250 tgcctggtatcacaagggaa 161269
>gb|AC166834.2| Mus musculus BAC clone RP23-158D24 from chromosome 7, complete sequence Length = 212016 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 tggttcagataggatgtgca 89 |||||||||||||||||||| Sbjct: 50252 tggttcagataggatgtgca 50271
>gb|AC104851.2| Homo sapiens chromosome 3 clone RP11-475N4, complete sequence Length = 160039 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 146 aataaaagatgggtgcctcctact 169 ||||||||||| |||||||||||| Sbjct: 32875 aataaaagatgagtgcctcctact 32852
>dbj|AB065462.1| Homo sapiens gene for seven transmembrane helix receptor, complete cds, isolate:CBRC7TM_25 Length = 21704 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 328 ctttcaccgtgcggcccctggtgg 351 ||||||||||||| |||||||||| Sbjct: 6774 ctttcaccgtgcgccccctggtgg 6797 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,003,042 Number of Sequences: 3902068 Number of extensions: 6003042 Number of successful extensions: 88956 Number of sequences better than 10.0: 55 Number of HSP's better than 10.0 without gapping: 54 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 88638 Number of HSP's gapped (non-prelim): 298 length of query: 626 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 603 effective length of database: 17,143,297,704 effective search space: 10337408515512 effective search space used: 10337408515512 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
