ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags5a15 |
|---|---|
| Clone Library Name | barley_pub |
>VATH_ARATH (Q9LX65) Probable vacuolar ATP synthase subunit H (EC 3.6.3.14)| (V-ATPase H subunit) (Vacuolar proton pump H subunit) (Vacuolar proton pump subunit SFD) Length = 441 Score = 247 bits (630), Expect = 2e-65 Identities = 122/179 (68%), Positives = 145/179 (81%) Frame = +1 Query: 97 MDRAELTTEQVLKRDIPWETYMSTKLITSTCLQLLRRYDHKPESQRGPLLDEDGPSYVHV 276 MD+AEL+ EQVLKRDIPWETYM+TKL+++ LQLLRRYD KPES R LLDEDGP+YVH+ Sbjct: 1 MDQAELSIEQVLKRDIPWETYMNTKLVSAKGLQLLRRYDKKPESARAQLLDEDGPAYVHL 60 Query: 277 FLNILRSISKEETVEYVLALIDEMLAANPKRAALFYDKSLSGEDIYDPFLRLLLKGNWFV 456 F++ILR I KEETVEYVLALI EML+ANP RA LF+D+SL+ ED Y+PFLRLL KGNWF+ Sbjct: 61 FVSILRDIFKEETVEYVLALIYEMLSANPTRARLFHDESLANEDTYEPFLRLLWKGNWFI 120 Query: 457 QEKSCKILTHLISARPKLQNGMVPNGEASNSKSKLTSIHDVLKGLVDWLCSQLRNPTHP 633 QEKSCKIL +ISARPK N ++ NG I DVLKGLV+WLC+QL+ P+HP Sbjct: 121 QEKSCKILAWIISARPKAGNAVIGNG-----------IDDVLKGLVEWLCAQLKQPSHP 168
>VATH_MANSE (Q9U5N0) Vacuolar ATP synthase subunit H (EC 3.6.3.14) (V-ATPase H| subunit) (Vacuolar proton pump H subunit) (Vacuolar proton pump subunit SFD) Length = 475 Score = 75.1 bits (183), Expect = 2e-13 Identities = 40/136 (29%), Positives = 76/136 (55%) Frame = +1 Query: 109 ELTTEQVLKRDIPWETYMSTKLITSTCLQLLRRYDHKPESQRGPLLDEDGPSYVHVFLNI 288 ++ ++ + I W++Y+ ++IT + D + + L D++ + VFLN+ Sbjct: 31 QIRASEIRQTQINWQSYLQGQMITQRDHDFIVNLDQRGQKD---LPDKNPDACADVFLNL 87 Query: 289 LRSISKEETVEYVLALIDEMLAANPKRAALFYDKSLSGEDIYDPFLRLLLKGNWFVQEKS 468 L ISK+ T++Y+L LID++L+ + R +F + SG +I+ PFL LL + + FVQ + Sbjct: 88 LTHISKDHTIQYILVLIDDILSEDKSRVKIFRETKYSG-NIWQPFLNLLNRQDEFVQHMT 146 Query: 469 CKILTHLISARPKLQN 516 +I+ L P+L + Sbjct: 147 ARIIAKLACWHPQLMD 162
>VATH_MOUSE (Q8BVE3) Vacuolar ATP synthase subunit H (EC 3.6.3.14) (V-ATPase H| subunit) (Vacuolar proton pump H subunit) Length = 483 Score = 70.5 bits (171), Expect = 4e-12 Identities = 39/150 (26%), Positives = 84/150 (56%), Gaps = 2/150 (1%) Frame = +1 Query: 124 QVLKRDIPWETYMSTKLITSTCLQLLRRYDHKPESQ-RGPLLDEDGPSYVHVFLNILRSI 300 +V + W++Y+ ++I++ + ++R++ K S+ + +L +G F+N++ I Sbjct: 25 EVRANKVNWQSYLQGQMISAEDCEFIQRFEMKRSSEDKQEMLQTEGSQCAKTFINLMTHI 84 Query: 301 SKEETVEYVLALIDEMLAANPKRAALFYDKSLSGEDIYDP-FLRLLLKGNWFVQEKSCKI 477 SKE+TV+Y+L ++D+ML N +R ++F+D + + P FL +L + + F + +I Sbjct: 85 SKEQTVQYILTMVDDMLQENHQRVSIFFDYAKRSKSTAWPYFLPMLNRQDPFTVHMAARI 144 Query: 478 LTHLISARPKLQNGMVPNGEASNSKSKLTS 567 + L + +L G N + K++L+S Sbjct: 145 IAKLAAWGKELMEGSDLNYYFNWIKTQLSS 174
>VATH_BOVIN (O46563) Vacuolar ATP synthase subunit H (EC 3.6.3.14) (V-ATPase H| subunit) (Vacuolar proton pump H subunit) (V-ATPase 50/57 kDa subunits) (Vacuolar proton pump subunit SFD) Length = 483 Score = 69.3 bits (168), Expect = 9e-12 Identities = 41/151 (27%), Positives = 83/151 (54%), Gaps = 3/151 (1%) Frame = +1 Query: 124 QVLKRDIPWETYMSTKLITSTCLQLLRRYDHK--PESQRGPLLDEDGPSYVHVFLNILRS 297 +V + W++Y+ ++I+S + ++R++ K PE ++ +L +G F+N++ Sbjct: 25 EVRANKVNWQSYLQGQMISSEDCEFIQRFEMKRSPEEKQ-EMLQTEGSQRAKTFINLMTH 83 Query: 298 ISKEETVEYVLALIDEMLAANPKRAALFYD-KSLSGEDIYDPFLRLLLKGNWFVQEKSCK 474 ISKE+TV+Y+L L+D+ L N +R ++F+D S + FL +L + + F + + Sbjct: 84 ISKEQTVQYILTLVDDTLQENHQRVSIFFDYAKRSKNTAWSYFLPMLNRQDLFTVHMTAR 143 Query: 475 ILTHLISARPKLQNGMVPNGEASNSKSKLTS 567 I+ L + +L G N + K++L+S Sbjct: 144 IIAKLAAWGKELMEGSDLNYYFNWIKTQLSS 174
>VATH_PIG (Q9TVC1) Vacuolar ATP synthase subunit H (EC 3.6.3.14) (V-ATPase H| subunit) (Vacuolar proton pump H subunit) (V-ATPase 50/57 kDa subunits) (Vacuolar proton pump subunit SFD) Length = 483 Score = 68.2 bits (165), Expect = 2e-11 Identities = 40/151 (26%), Positives = 82/151 (54%), Gaps = 3/151 (1%) Frame = +1 Query: 124 QVLKRDIPWETYMSTKLITSTCLQLLRRYDHK--PESQRGPLLDEDGPSYVHVFLNILRS 297 +V + W++Y+ ++I+S + ++R++ K PE ++ +L +G F+N++ Sbjct: 25 EVRANKVNWQSYLQGQMISSEDCEFIQRFEMKRSPEEKQ-EMLQTEGSQCAKTFINLMTH 83 Query: 298 ISKEETVEYVLALIDEMLAANPKRAALFYD-KSLSGEDIYDPFLRLLLKGNWFVQEKSCK 474 ISKE+TV+Y+L ++D+ L N +R ++F+D S + FL +L + + F + + Sbjct: 84 ISKEQTVQYILTMVDDTLQENHQRVSIFFDYAKRSKNTAWSYFLPMLNRQDLFTVHMAAR 143 Query: 475 ILTHLISARPKLQNGMVPNGEASNSKSKLTS 567 I+ L + +L G N + K++L S Sbjct: 144 IIAKLAAWGKELMEGSDLNYYFNWIKTQLAS 174
>VATH_HUMAN (Q9UI12) Vacuolar ATP synthase subunit H (EC 3.6.3.14) (V-ATPase H| subunit) (Vacuolar proton pump H subunit) (V-ATPase 50/57 kDa subunits) (Vacuolar proton pump subunit SFD) (VMA13) (Nef-binding protein 1) (NBP1) Length = 483 Score = 67.8 bits (164), Expect = 3e-11 Identities = 39/151 (25%), Positives = 85/151 (56%), Gaps = 3/151 (1%) Frame = +1 Query: 124 QVLKRDIPWETYMSTKLITSTCLQLLRRYDHK--PESQRGPLLDEDGPSYVHVFLNILRS 297 +V + W++Y+ ++I++ + ++R++ K PE ++ +L +G F+N++ Sbjct: 25 EVRANKVNWQSYLQGQMISAEDCEFIQRFEMKRSPEEKQ-EMLQTEGSQCAKTFINLMTH 83 Query: 298 ISKEETVEYVLALIDEMLAANPKRAALFYDKSLSGEDIYDP-FLRLLLKGNWFVQEKSCK 474 I KE+TV+Y+L ++D+ML N +R ++F+D + ++ P FL +L + + F + + Sbjct: 84 ICKEQTVQYILTMVDDMLQENHQRVSIFFDYARCSKNTAWPYFLPMLNRQDPFTVHMAAR 143 Query: 475 ILTHLISARPKLQNGMVPNGEASNSKSKLTS 567 I+ L + +L G N + K++L+S Sbjct: 144 IIAKLAAWGKELMEGSDLNYYFNWIKTQLSS 174
>VATH_DROME (Q9V3J1) Vacuolar ATP synthase subunit H (EC 3.6.3.14) (V-ATPase H| subunit) (Vacuolar proton pump H subunit) (Vacuolar proton pump subunit SFD) Length = 468 Score = 60.5 bits (145), Expect = 4e-09 Identities = 34/116 (29%), Positives = 62/116 (53%), Gaps = 1/116 (0%) Frame = +1 Query: 136 RDIPWETYMSTKLITSTCLQLLRRYDHKPESQRGPLLDEDGPSYVHVFLNILRSISKEET 315 R I W +YM +++I+ + + D R L ++ V LN++ +SK+ T Sbjct: 31 RTINWASYMQSQMISEEDYKAISALD----KSRASFLAQNSSQVVKTLLNLVSHLSKDST 86 Query: 316 VEYVLALIDEMLAANPKRAALFYDKS-LSGEDIYDPFLRLLLKGNWFVQEKSCKIL 480 ++Y+L L+D++L + R LF+D + + I+ PFL LL + + F+ S +IL Sbjct: 87 IQYILVLLDDLLQEDRSRVDLFHDTAGKLKQCIWGPFLNLLNRQDGFIVNMSSRIL 142
>VATH1_CAEEL (Q20666) Probable vacuolar ATP synthase subunit H 1 (EC 3.6.3.14)| (V-ATPase H subunit 1) (Vacuolar proton pump H subunit 1) (Vacuolar proton pump subunit SFD 1) Length = 451 Score = 46.6 bits (109), Expect = 6e-05 Identities = 30/116 (25%), Positives = 58/116 (50%), Gaps = 2/116 (1%) Frame = +1 Query: 148 WETYMSTKLITSTCLQLLRRYDH-KPESQRGPLLDEDGPSYVHVFLNILRSISKEETVEY 324 W + T++I + + Y + E++R +L V+ F++++ ISK++ V Y Sbjct: 28 WGLFTRTRMIAQSDYDFIVTYQQAENEAERSTVLSVFKEKAVYAFVHLMSQISKDDYVRY 87 Query: 325 VLALIDEMLAANPKRAALFYDKS-LSGEDIYDPFLRLLLKGNWFVQEKSCKILTHL 489 L LID+ML + R +F D + L + F+ LL + + ++ + ILT + Sbjct: 88 TLTLIDDMLREDVTRTIIFEDVAVLLKRSPFSFFMGLLHRQDQYIVHITFSILTKM 143
>VATH2_CAEEL (Q22494) Probable vacuolar ATP synthase subunit H 2 (EC 3.6.3.14)| (V-ATPase H subunit 2) (Vacuolar proton pump H subunit 2) (Vacuolar proton pump subunit SFD 2) Length = 470 Score = 42.7 bits (99), Expect = 9e-04 Identities = 26/133 (19%), Positives = 62/133 (46%), Gaps = 4/133 (3%) Frame = +1 Query: 103 RAELTTEQVLKRDIPWETYMSTKLITSTCLQLLRRYDH-KPESQRGPLLDEDGPS--YVH 273 R +L +++ W +Y +++I + +++ K + +R +L + + Sbjct: 20 RLQLEAQELRNNKPNWGSYFRSQMIQEDDYNFITSFENAKSKEERDQVLAANNANGQAAK 79 Query: 274 VFLNILRSISKEETVEYVLALIDEMLAANPKRAALFYDKSL-SGEDIYDPFLRLLLKGNW 450 N++ ++K++ V YVL L D+ML + R LF+ + ++ +L +L + + Sbjct: 80 TMANLITQVAKDQNVRYVLTLFDDMLQEDKSRVELFHSAAARQKRTVWSQYLGILQRQDN 139 Query: 451 FVQEKSCKILTHL 489 F+ + I+ L Sbjct: 140 FIVNQMSSIIAKL 152
>VATH_SCHPO (O14265) Vacuolar ATP synthase subunit H (EC 3.6.3.14) (V-ATPase H| subunit) (Vacuolar proton pump H subunit) (V-ATPase 54 kDa subunit) Length = 450 Score = 35.8 bits (81), Expect = 0.11 Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 4/86 (4%) Frame = +1 Query: 142 IPWETYMSTKLITSTCLQLLRRYDHKPESQRGPLLDEDGPSYVHVFLNILRSISKEETVE 321 IPW+ Y + + LQ + KP S +ED +Y ++FL +L + V Sbjct: 36 IPWQGYQRSGSLEENELQEIENLTGKPLSAYVKTAEEDTTAYSNLFLKLLSMKDTPDVVN 95 Query: 322 YVLA-LIDEMLAANPKRAAL---FYD 387 + L L D +L +N +A FYD Sbjct: 96 FALVKLADTLLNSNKFLSAFGPAFYD 121
>NBEA_CAEEL (Q19317) Putative neurobeachin homolog| Length = 2507 Score = 32.3 bits (72), Expect = 1.2 Identities = 22/76 (28%), Positives = 40/76 (52%) Frame = +1 Query: 268 VHVFLNILRSISKEETVEYVLALIDEMLAANPKRAALFYDKSLSGEDIYDPFLRLLLKGN 447 VH LN+L ++ +++ + VLAL+ +LA +P DK+ + I++ LL N Sbjct: 780 VHTLLNLLATVREDDNLYDVLALVTRLLAEHPAIMIPAIDKNKALGIIFN----LLAAPN 835 Query: 448 WFVQEKSCKILTHLIS 495 ++ + KIL +S Sbjct: 836 ELIRIPALKILGFFLS 851
>XPO4_MOUSE (Q9ESJ0) Exportin-4 (Exp4)| Length = 1151 Score = 32.0 bits (71), Expect = 1.6 Identities = 26/85 (30%), Positives = 42/85 (49%) Frame = +1 Query: 241 LLDEDGPSYVHVFLNILRSISKEETVEYVLALIDEMLAANPKRAALFYDKSLSGEDIYDP 420 LL++ + FL + + + +YV I +A KR +L DKS+ + I+ Sbjct: 84 LLEKGSIESLRTFL-LTYVLQRPNLQKYVREQILLAVAVIVKRGSL--DKSIDCKSIFHE 140 Query: 421 FLRLLLKGNWFVQEKSCKILTHLIS 495 +L+ GN VQ +C ILT L+S Sbjct: 141 VSQLISSGNPTVQTLACSILTALLS 165
>XPO4_HUMAN (Q9C0E2) Exportin-4 (Exp4)| Length = 1151 Score = 32.0 bits (71), Expect = 1.6 Identities = 26/85 (30%), Positives = 42/85 (49%) Frame = +1 Query: 241 LLDEDGPSYVHVFLNILRSISKEETVEYVLALIDEMLAANPKRAALFYDKSLSGEDIYDP 420 LL++ + FL + + + +YV I +A KR +L DKS+ + I+ Sbjct: 84 LLEKGSIESLRTFL-LTYVLQRPNLQKYVREQILLAVAVIVKRGSL--DKSIDCKSIFHE 140 Query: 421 FLRLLLKGNWFVQEKSCKILTHLIS 495 +L+ GN VQ +C ILT L+S Sbjct: 141 VSQLISSGNPTVQTLACSILTALLS 165
>ESYN_FUSEQ (Q00869) Enniatin synthetase [Includes: N-methylcyclopeptide| synthetase (EC 6.3.2.-); S-adenosyl-L-methionine-dependent N-methyltransferase (EC 2.1.1.-)] Length = 3131 Score = 32.0 bits (71), Expect = 1.6 Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 11/72 (15%) Frame = +1 Query: 160 MSTKLITSTCLQ-LLRRYDHKPE------SQRGPLLDE----DGPSYVHVFLNILRSISK 306 MS+ I T L LL RY H PE +++ PLL+E DGP+ V + + S + Sbjct: 272 MSSATICRTALAILLSRYTHSPEALFGIVTEQTPLLEEQLMLDGPTRTVVPIRV--SCAS 329 Query: 307 EETVEYVLALID 342 E++V +++ ID Sbjct: 330 EQSVSDIMSTID 341
>BCL3_HUMAN (P20749) B-cell lymphoma 3-encoded protein (Protein Bcl-3)| Length = 446 Score = 31.6 bits (70), Expect = 2.1 Identities = 19/51 (37%), Positives = 25/51 (49%) Frame = -3 Query: 155 VSHGMSRLRTCSVVSSARSIAAGQAPPPLRAPTPQLRRPEGPRGSAGXLVP 3 + G LRT + A PLRAP+P+ P PRG+AG +VP Sbjct: 1 MDEGPVDLRTRPKAAGLPGAALPLRKRPLRAPSPE---PAAPRGAAGLVVP 48
>Y938_XYLFA (Q9PEU0) Hypothetical UPF0169 lipoprotein Xf0938 precursor| Length = 292 Score = 31.6 bits (70), Expect = 2.1 Identities = 26/84 (30%), Positives = 31/84 (36%) Frame = +1 Query: 385 DKSLSGEDIYDPFLRLLLKGNWFVQEKSCKILTHLISARPKLQNGMVPNGEASNSKSKLT 564 D + E +YD L+ KGNW E S K L P + MV N A K Sbjct: 36 DDGMPVEHLYDKAHTLMKKGNWAGAEVSFKRLIAQYPYGPYTEQAMVENAYAQYKSGK-- 93 Query: 565 SIHDVLKGLVDWLCSQLRNPTHPN 636 HD +D PTH N Sbjct: 94 --HDDAVSSIDRFIRTY--PTHHN 113
>Y1756_XYLFT (Q87AR6) Hypothetical UPF0169 lipoprotein PD1756 precursor| Length = 293 Score = 31.6 bits (70), Expect = 2.1 Identities = 26/84 (30%), Positives = 31/84 (36%) Frame = +1 Query: 385 DKSLSGEDIYDPFLRLLLKGNWFVQEKSCKILTHLISARPKLQNGMVPNGEASNSKSKLT 564 D + E +YD L+ KGNW E S K L P + MV N A K Sbjct: 36 DDGMPVEHLYDKAHTLMKKGNWAGAELSFKRLIAQYPYGPYTEQAMVENAYAQYKSGK-- 93 Query: 565 SIHDVLKGLVDWLCSQLRNPTHPN 636 HD +D PTH N Sbjct: 94 --HDDAVSSIDRFIRTY--PTHHN 113
>GPMI_ANTSP (Q06464) 2,3-bisphosphoglycerate-independent phosphoglycerate| mutase (EC 5.4.2.1) (Phosphoglyceromutase) (BPG-independent PGAM) (iPGM) Length = 510 Score = 30.8 bits (68), Expect = 3.5 Identities = 32/109 (29%), Positives = 47/109 (43%), Gaps = 6/109 (5%) Frame = +1 Query: 268 VHVFLNILRS---ISKEETVEYVLALIDEMLAANPKRAALFYDKSLSGEDIYDPFLR--- 429 VH +N L++ ISK+ V L LI + PK+A LF + + DI D Sbjct: 125 VHSHINHLKALIQISKQYKVMTCLHLITDGRDTLPKQAKLFVKEII---DIIDENYNTEI 181 Query: 430 LLLKGNWFVQEKSCKILTHLISARPKLQNGMVPNGEASNSKSKLTSIHD 576 + G ++ ++ C+ S K MV N NS S + SI D Sbjct: 182 CTISGRYYSMDRDCR-----WSRTEKAYKAMVENSCNQNSSSDILSIID 225
>SPG2_STRSG (P19909) Immunoglobulin G binding protein G precursor (IgG binding| protein G) Length = 593 Score = 30.0 bits (66), Expect = 6.0 Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 3/39 (7%) Frame = +1 Query: 298 ISKEETVEYVLALIDEMLAANPKR---AALFYDKSLSGE 405 I+ +TVE V ALIDE+LAA PK + K+L GE Sbjct: 278 INNAKTVEGVKALIDEILAALPKTDTYKLILNGKTLKGE 316
>RECF_PROMM (Q7V559) DNA replication and repair protein recF| Length = 365 Score = 30.0 bits (66), Expect = 6.0 Identities = 39/149 (26%), Positives = 62/149 (41%), Gaps = 9/149 (6%) Frame = +1 Query: 193 QLLRRYDHKPESQRGPLLDEDGPSYVHVFLNILRSISKE-ETVEYVLALIDEMLAANPKR 369 QL R++ H P +R LLD V I R S+ +E + A E L+ + +R Sbjct: 153 QLWRQWRHIPIQERDSLLDAFDVQMALVSTRIHRRRSRALARLEPLAARWQETLSKHKER 212 Query: 370 AALFYD--KSLSGEDIYDPF---LRLLLKGNWFVQEK--SCKILTHLISARPKLQNGMVP 528 L Y L GE+ +P+ + L G +E+ SC+I H R L + Sbjct: 213 LRLDYQPGSQLEGEEAEEPWRLAIETQLLGQRSEEERLGSCRIGPHRDEVRLLLNDSEAR 272 Query: 529 N-GEASNSKSKLTSIHDVLKGLVDWLCSQ 612 G A ++ + ++ LV LC + Sbjct: 273 RFGSAGQQRTVVLALKLAELELVGELCGE 301
>MREBH_BACSU (P39763) Protein mreBH| Length = 335 Score = 29.6 bits (65), Expect = 7.9 Identities = 32/134 (23%), Positives = 54/134 (40%), Gaps = 2/134 (1%) Frame = +1 Query: 235 GPLLDEDGPSYVHVFLNILRSISKEETVEYVLALIDEMLAANPKRAALFYDKSLSGEDIY 414 G LDED S+V N+L E T E V I L + A + G D+ Sbjct: 182 GDQLDEDIVSFVRKKYNLLIG---ERTAEQVKMEIGHALIEHIPEAM-----EIRGRDLV 233 Query: 415 DPFLRLLLKGNWFVQEKSCKILTHLISARPKLQNGMVP--NGEASNSKSKLTSIHDVLKG 588 + ++ + +Q+ + L H++ A P +G+ + LT +L G Sbjct: 234 TGLPKTIMLQSNEIQDAMRESLLHILEAIRATLEDCPPELSGDIVDRGVILTGGGALLNG 293 Query: 589 LVDWLCSQLRNPTH 630 + +WL ++ P H Sbjct: 294 IKEWLTEEIVVPVH 307
>SYN2_RAT (Q63537) Synapsin-2 (Synapsin II)| Length = 586 Score = 29.6 bits (65), Expect = 7.9 Identities = 15/38 (39%), Positives = 18/38 (47%) Frame = -3 Query: 128 TCSVVSSARSIAAGQAPPPLRAPTPQLRRPEGPRGSAG 15 T S +SA S + PPP +AP PQ P S G Sbjct: 44 TASAATSAASPGPERRPPPAQAPAPQPAPQPAPTPSVG 81
>SYN2_MOUSE (Q64332) Synapsin-2 (Synapsin II)| Length = 586 Score = 29.6 bits (65), Expect = 7.9 Identities = 15/38 (39%), Positives = 18/38 (47%) Frame = -3 Query: 128 TCSVVSSARSIAAGQAPPPLRAPTPQLRRPEGPRGSAG 15 T S +SA S + PPP +AP PQ P S G Sbjct: 44 TASAATSAASPGPERRPPPAQAPAPQPAPQPAPTPSVG 81
>COEA1_MOUSE (Q80X19) Collagen alpha-1(XIV) chain precursor| Length = 1797 Score = 29.6 bits (65), Expect = 7.9 Identities = 21/52 (40%), Positives = 24/52 (46%), Gaps = 9/52 (17%) Frame = -3 Query: 131 RTCSVVSSARSIAAGQAPPP----LRAPTPQL-----RRPEGPRGSAGXLVP 3 R+CS S +A G A PP LR P Q + PEGPRG G P Sbjct: 1450 RSCSC-SETNEVALGPAGPPGGPGLRGPKGQQGEQGPKGPEGPRGETGPAGP 1500 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 91,597,659 Number of Sequences: 219361 Number of extensions: 1800279 Number of successful extensions: 6140 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 5569 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6127 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5938641176 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
