ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags5a15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_185755.2| Oryza sativa (japonica cultivar-group), mRNA 478 e-131
2dbj|AK067714.1| Oryza sativa (japonica cultivar-group) cDNA clon... 478 e-131
3dbj|AK104331.1| Oryza sativa (japonica cultivar-group) cDNA clon... 462 e-127
4gb|AY108648.1| Zea mays PCO090155 mRNA sequence 335 1e-88
5dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 131 3e-27
6dbj|AP004401.5| Oryza sativa (japonica cultivar-group) genomic D... 131 3e-27
7gb|BT018553.1| Zea mays clone EL01N0439D12.d mRNA sequence 129 1e-26
8gb|AY225129.1| Suaeda maritima subsp. salsa putative vacuolar AT... 78 4e-11
9emb|AJ438592.1|MCR438592 Mesembryanthemum crystallinum mRNA for ... 60 9e-06
10gb|AC125180.6| Mus musculus BAC clone RP23-322K1 from chromosome... 42 2.2
11gb|AC125076.4| Mus musculus BAC clone RP23-472F9 from chromosome... 42 2.2
12emb|AL390058.13| Human DNA sequence from clone RP11-345E19 on ch... 42 2.2
13gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 42 2.2
14gb|AC154563.2| Mus musculus BAC clone RP23-401E22 from chromosom... 42 2.2
15dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 2.2
16gb|AC101962.7| Mus musculus chromosome 3, clone RP24-222A19, com... 42 2.2
17emb|AL845453.6| Mouse DNA sequence from clone RP23-296G5 on chro... 42 2.2
18gb|AC113507.12| Mus musculus chromosome 3, clone RP23-376O10, co... 42 2.2
19ref|XM_522561.1| PREDICTED: Pan troglodytes similar to RIM bindi... 40 8.7
20gb|AC162163.2| Mus musculus chromosome 1, clone RP23-258N15, com... 40 8.7
21gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 40 8.7
22gb|AC100740.8| Mus musculus chromosome 1, clone RP24-421N21, com... 40 8.7
23gb|AC002466.1| Homo sapiens BAC clone CTA-354L7 from 7, complete... 40 8.7
24ref|XM_665604.1| Plasmodium berghei strain ANKA hypothetical pro... 40 8.7
25gb|AC134858.6| Mus musculus BAC clone RP23-361A18 from chromosom... 40 8.7
26emb|BX572596.1| Rhodopseudomonas palustris CGA009 complete genom... 40 8.7
27emb|AL732587.8| Mouse DNA sequence from clone RP23-268K22 on chr... 40 8.7
28gb|AC009372.6| Drosophila melanogaster 3L BAC RP98-48N4 (Roswell... 40 8.7
29ref|NM_079427.2| Drosophila melanogaster UDP-glucose-glycoprotei... 40 8.7
30gb|AF145049.1|AF145049 Streptomyces fradiae tylosin-biosynthetic... 40 8.7
31gb|AY058353.1| Drosophila melanogaster GH12609 full length cDNA 40 8.7
32gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 8.7
33gb|AC159039.2| Pan troglodytes BAC clone CH251-65A20 from chromo... 40 8.7
34emb|BX572624.15| Mouse DNA sequence from clone RP23-21G15 on chr... 40 8.7
35emb|AJ328099.1|HSA328099 Homo sapiens genomic sequence surroundi... 40 8.7
36gb|AE003519.3| Drosophila melanogaster chromosome 3L, section 66... 40 8.7
37gb|AC166124.4| Mus musculus chromosome 1, clone RP23-105N9, comp... 40 8.7
38gb|U20554.1|DMU20554 Drosophila melanogaster UDP-glucose:glycopr... 40 8.7
39emb|AL671916.5| Mouse DNA sequence from clone RP23-294O1 on chro... 40 8.7
40dbj|AB032402.1| Mus musculus BSP gene for brain serine protease,... 40 8.7 
>ref|NM_185755.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1694

 Score =  478 bits (241), Expect = e-131
 Identities = 465/542 (85%)
 Strand = Plus / Plus

                                                                       
Query: 96  gatggatcgcgccgagctcaccacggagcaggttctcaagcgggacattccatgggagac 155
           |||||||| ||| ||||| ||||| ||||||||||||||| |||| |||||||||||  |
Sbjct: 113 gatggatcacgcggagctgaccaccgagcaggttctcaagagggatattccatgggaatc 172

                                                                       
Query: 156 atatatgtcaactaaactgatcacttcgacatgccttcagcttttaaggcgttatgacca 215
           ||| ||| ||| ||| |||||  |   ||||||||||||||||||  | |||||||||||
Sbjct: 173 atacatggcaaataagctgatttccgggacatgccttcagcttttgcgacgttatgacca 232

                                                                       
Query: 216 caaaccagaaagtcagagaggtccgttgcttgatgaggatggaccatcgtatgttcatgn 275
           |||||||||||| ||  ||||||| ||||||||||||||||| ||||| |||||||  | 
Sbjct: 233 caaaccagaaagccaacgaggtcctttgcttgatgaggatgggccatcctatgttcgagt 292

                                                                       
Query: 276 nnnnnngaatatcttgcgaagcatctctaaggaagagaccgtggaatatgtgcttgccct 335
                 |||||||||||| | |||||| |||||||| || || |||||||||||||||||
Sbjct: 293 gttcctgaatatcttgcggaacatctccaaggaagatactgttgaatatgtgcttgccct 352

                                                                       
Query: 336 cattgatgagatgcttgcagcgaatcctaaacgagcagcactgttttacgacaaatctct 395
            |||||||||||||||||||  ||||||||||||||||||||||| || || || |||||
Sbjct: 353 gattgatgagatgcttgcagtaaatcctaaacgagcagcactgttctatgataactctct 412

                                                                       
Query: 396 ctctggtgaagacatttacgatcctttcctaagactgctcttgaaaggtaactggttcgt 455
           ||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||| ||
Sbjct: 413 ctctggtgaagacatctacgaccctttcctaagattgctcttgaaaggtaactggtttgt 472

                                                                       
Query: 456 acaggaaaagagctgtaagatattgactcacttaataagtgcgagacctaagcttcagaa 515
            || ||||| || |||||||||||||| ||  ||||||||||  |||| ||| | |||||
Sbjct: 473 gcaagaaaaaagttgtaagatattgacccaaataataagtgcacgacccaagatgcagaa 532

                                                                       
Query: 516 cggcatggttccaaatggagaggcttcaaattcaaagagcaagcttacatcaattcatga 575
            ||||| |||||||||||||||||||||||||||||||||||||| ||||| | ||| ||
Sbjct: 533 tggcatagttccaaatggagaggcttcaaattcaaagagcaagctaacatctactcaaga 592

                                                                       
Query: 576 tgtgttaaagggcttggttgattggctctgttctcagctcaggaaccccacccacccgaa 635
           ||||||||  || |||||||||||||||||||||||||| ||||| || |||||||| ||
Sbjct: 593 tgtgttaagaggtttggttgattggctctgttctcagctgaggaatcctacccacccaaa 652

             
Query: 636 ct 637
           ||
Sbjct: 653 ct 654
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>dbj|AK067714.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013120K21, full
           insert sequence
          Length = 1764

 Score =  478 bits (241), Expect = e-131
 Identities = 465/542 (85%)
 Strand = Plus / Plus

                                                                       
Query: 96  gatggatcgcgccgagctcaccacggagcaggttctcaagcgggacattccatgggagac 155
           |||||||| ||| ||||| ||||| ||||||||||||||| |||| |||||||||||  |
Sbjct: 114 gatggatcacgcggagctgaccaccgagcaggttctcaagagggatattccatgggaatc 173

                                                                       
Query: 156 atatatgtcaactaaactgatcacttcgacatgccttcagcttttaaggcgttatgacca 215
           ||| ||| ||| ||| |||||  |   ||||||||||||||||||  | |||||||||||
Sbjct: 174 atacatggcaaataagctgatttccgggacatgccttcagcttttgcgacgttatgacca 233

                                                                       
Query: 216 caaaccagaaagtcagagaggtccgttgcttgatgaggatggaccatcgtatgttcatgn 275
           |||||||||||| ||  ||||||| ||||||||||||||||| ||||| |||||||  | 
Sbjct: 234 caaaccagaaagccaacgaggtcctttgcttgatgaggatgggccatcctatgttcgagt 293

                                                                       
Query: 276 nnnnnngaatatcttgcgaagcatctctaaggaagagaccgtggaatatgtgcttgccct 335
                 |||||||||||| | |||||| |||||||| || || |||||||||||||||||
Sbjct: 294 gttcctgaatatcttgcggaacatctccaaggaagatactgttgaatatgtgcttgccct 353

                                                                       
Query: 336 cattgatgagatgcttgcagcgaatcctaaacgagcagcactgttttacgacaaatctct 395
            |||||||||||||||||||  ||||||||||||||||||||||| || || || |||||
Sbjct: 354 gattgatgagatgcttgcagtaaatcctaaacgagcagcactgttctatgataactctct 413

                                                                       
Query: 396 ctctggtgaagacatttacgatcctttcctaagactgctcttgaaaggtaactggttcgt 455
           ||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||| ||
Sbjct: 414 ctctggtgaagacatctacgaccctttcctaagattgctcttgaaaggtaactggtttgt 473

                                                                       
Query: 456 acaggaaaagagctgtaagatattgactcacttaataagtgcgagacctaagcttcagaa 515
            || ||||| || |||||||||||||| ||  ||||||||||  |||| ||| | |||||
Sbjct: 474 gcaagaaaaaagttgtaagatattgacccaaataataagtgcacgacccaagatgcagaa 533

                                                                       
Query: 516 cggcatggttccaaatggagaggcttcaaattcaaagagcaagcttacatcaattcatga 575
            ||||| |||||||||||||||||||||||||||||||||||||| ||||| | ||| ||
Sbjct: 534 tggcatagttccaaatggagaggcttcaaattcaaagagcaagctaacatctactcaaga 593

                                                                       
Query: 576 tgtgttaaagggcttggttgattggctctgttctcagctcaggaaccccacccacccgaa 635
           ||||||||  || |||||||||||||||||||||||||| ||||| || |||||||| ||
Sbjct: 594 tgtgttaagaggtttggttgattggctctgttctcagctgaggaatcctacccacccaaa 653

             
Query: 636 ct 637
           ||
Sbjct: 654 ct 655
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>dbj|AK104331.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-D11, full
           insert sequence
          Length = 1694

 Score =  462 bits (233), Expect = e-127
 Identities = 463/542 (85%)
 Strand = Plus / Plus

                                                                       
Query: 96  gatggatcgcgccgagctcaccacggagcaggttctcaagcgggacattccatgggagac 155
           |||||||| ||| ||||| ||||| ||||||||||||||| |||| |||||||||||  |
Sbjct: 113 gatggatcacgcggagctgaccaccgagcaggttctcaagagggatattccatgggaatc 172

                                                                       
Query: 156 atatatgtcaactaaactgatcacttcgacatgccttcagcttttaaggcgttatgacca 215
           ||| ||| ||| |||  ||||  |   ||||||||||||||||||  | ||||||| |||
Sbjct: 173 atacatggcaaataagttgatttccgggacatgccttcagcttttgcgacgttatggcca 232

                                                                       
Query: 216 caaaccagaaagtcagagaggtccgttgcttgatgaggatggaccatcgtatgttcatgn 275
           |||||||||||| ||  ||||||| ||||||||||||||||| ||||| |||||||  | 
Sbjct: 233 caaaccagaaagccaacgaggtcctttgcttgatgaggatgggccatcctatgttcgagt 292

                                                                       
Query: 276 nnnnnngaatatcttgcgaagcatctctaaggaagagaccgtggaatatgtgcttgccct 335
                 |||||||||||| | |||||| |||||||| || || |||||||||||||||||
Sbjct: 293 gttcctgaatatcttgcggaacatctccaaggaagatactgttgaatatgtgcttgccct 352

                                                                       
Query: 336 cattgatgagatgcttgcagcgaatcctaaacgagcagcactgttttacgacaaatctct 395
            |||||||||||||||||||  ||||||||||||||||||||||| || || || |||||
Sbjct: 353 gattgatgagatgcttgcagtaaatcctaaacgagcagcactgttctatgataactctct 412

                                                                       
Query: 396 ctctggtgaagacatttacgatcctttcctaagactgctcttgaaaggtaactggttcgt 455
           ||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||| ||
Sbjct: 413 ctctggtgaagacatctacgaccctttcctaagattgctcttgaaaggtaactggtttgt 472

                                                                       
Query: 456 acaggaaaagagctgtaagatattgactcacttaataagtgcgagacctaagcttcagaa 515
            || ||||| || |||||||||||||| ||  ||||||||||  |||| ||| | |||||
Sbjct: 473 gcaagaaaaaagttgtaagatattgacccaaataataagtgcacgacccaagatgcagaa 532

                                                                       
Query: 516 cggcatggttccaaatggagaggcttcaaattcaaagagcaagcttacatcaattcatga 575
            ||||| |||||||||||||||||||||||||||||||||||||| ||||| | ||| ||
Sbjct: 533 tggcatagttccaaatggagaggcttcaaattcaaagagcaagctaacatctactcaaga 592

                                                                       
Query: 576 tgtgttaaagggcttggttgattggctctgttctcagctcaggaaccccacccacccgaa 635
           ||||||||  || |||||||||||||||||||||||||| ||||| || |||||||| ||
Sbjct: 593 tgtgttaagaggtttggttgattggctctgttctcagctgaggaatcctacccacccaaa 652

             
Query: 636 ct 637
           ||
Sbjct: 653 ct 654
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>gb|AY108648.1| Zea mays PCO090155 mRNA sequence
          Length = 1795

 Score =  335 bits (169), Expect = 1e-88
 Identities = 444/538 (82%)
 Strand = Plus / Plus

                                                                       
Query: 97  atggatcgcgccgagctcaccacggagcaggttctcaagcgggacattccatgggagaca 156
           ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||   
Sbjct: 146 atggatcgcgccgagctcaccacggagcaggttctcaagcgagatattccatgggagcat 205

                                                                       
Query: 157 tatatgtcaactaaactgatcacttcgacatgccttcagcttttaaggcgttatgaccac 216
           || ||||||||||| || ||| |    || ||||||||||||||| |||| |||||||||
Sbjct: 206 tacatgtcaactaagcttatctccggaacgtgccttcagcttttacggcgatatgaccac 265

                                                                       
Query: 217 aaaccagaaagtcagagaggtccgttgcttgatgaggatggaccatcgtatgttcatgnn 276
           ||||| || || ||| ||| ||| || ||||| |||||||||||| | ||||| |  |  
Sbjct: 266 aaaccggagagccagcgagctcctttacttgaggaggatggaccagcatatgtccgagtt 325

                                                                       
Query: 277 nnnnngaatatcttgcgaagcatctctaaggaagagaccgtggaatatgtgcttgccctc 336
                ||||||| || | |||||||| ||||||||||| || ||||| ||||||||||||
Sbjct: 326 ttcctgaatatcctgtggagcatctccaaggaagagactgttgaatacgtgcttgccctc 385

                                                                       
Query: 337 attgatgagatgcttgcagcgaatcctaaacgagcagcactgttttacgacaaatctctc 396
           |||||||| ||||||||  | ||||||||||| |||||||||||||||||  ||||||| 
Sbjct: 386 attgatgaaatgcttgcgacaaatcctaaacgtgcagcactgttttacgatcaatctctg 445

                                                                       
Query: 397 tctggtgaagacatttacgatcctttcctaagactgctcttgaaaggtaactggttcgta 456
           ||||||||||| ||||| || |||||| ||||  || | | |||||| |||||||| |||
Sbjct: 446 tctggtgaagatatttatgagcctttcttaaggttgttatggaaaggcaactggtttgta 505

                                                                       
Query: 457 caggaaaagagctgtaagatattgactcacttaataagtgcgagacctaagcttcagaac 516
           || ||||| || |||||||||||||||    |||| |||||  |||| ||||||||||| 
Sbjct: 506 caagaaaaaagttgtaagatattgactgttataattagtgcacgaccaaagcttcagaat 565

                                                                       
Query: 517 ggcatggttccaaatggagaggcttcaaattcaaagagcaagcttacatcaattcatgat 576
           ||||   ||||||||||||| ||||| ||||| |||||||||||||| ||||  || |||
Sbjct: 566 ggcacacttccaaatggagatgcttcgaattcgaagagcaagcttacttcaacacacgat 625

                                                                     
Query: 577 gtgttaaagggcttggttgattggctctgttctcagctcaggaaccccacccacccga 634
           || || |  || |||||||||||||||||||| ||||| ||||| || || |||||||
Sbjct: 626 gtattgagaggtttggttgattggctctgttcacagctgaggaatcctacacacccga 683
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  131 bits (66), Expect = 3e-27
 Identities = 93/102 (91%)
 Strand = Plus / Plus

                                                                            
Query: 511      cagaacggcatggttccaaatggagaggcttcaaattcaaagagcaagcttacatcaatt 570
                ||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||| | |
Sbjct: 21765963 cagaatggcatagttccaaatggagaggcttcaaattcaaagagcaagctaacatctact 21766022

                                                          
Query: 571      catgatgtgttaaagggcttggttgattggctctgttctcag 612
                || ||||||||||  || ||||||||||||||||||||||||
Sbjct: 21766023 caagatgtgttaagaggtttggttgattggctctgttctcag 21766064



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 109/129 (84%)
 Strand = Plus / Plus

                                                                            
Query: 125      aggttctcaagcgggacattccatgggagacatatatgtcaactaaactgatcacttcga 184
                ||||||||||| |||| |||||||||||  |||| ||| ||| ||| |||||  |   ||
Sbjct: 21764637 aggttctcaagagggatattccatgggaatcatacatggcaaataagctgatttccggga 21764696

                                                                            
Query: 185      catgccttcagcttttaaggcgttatgaccacaaaccagaaagtcagagaggtccgttgc 244
                ||||||||||||||||  | ||||||||||||||||||||||| ||  ||||||| ||||
Sbjct: 21764697 catgccttcagcttttgcgacgttatgaccacaaaccagaaagccaacgaggtcctttgc 21764756

                         
Query: 245      ttgatgagg 253
                |||||||||
Sbjct: 21764757 ttgatgagg 21764765



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 65/71 (91%)
 Strand = Plus / Plus

                                                                            
Query: 358      aatcctaaacgagcagcactgttttacgacaaatctctctctggtgaagacatttacgat 417
                ||||||||||||||||||||||| || || || |||||||||||||||||||| ||||| 
Sbjct: 21765148 aatcctaaacgagcagcactgttctatgataactctctctctggtgaagacatctacgac 21765207

                           
Query: 418      cctttcctaag 428
                |||||||||||
Sbjct: 21765208 cctttcctaag 21765218



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 67/74 (90%)
 Strand = Plus / Plus

                                                                            
Query: 282      gaatatcttgcgaagcatctctaaggaagagaccgtggaatatgtgcttgccctcattga 341
                |||||||||||| | |||||| |||||||| || || ||||||||||||||||| |||||
Sbjct: 21764989 gaatatcttgcggaacatctccaaggaagatactgttgaatatgtgcttgccctgattga 21765048

                              
Query: 342      tgagatgcttgcag 355
                ||||||||||||||
Sbjct: 21765049 tgagatgcttgcag 21765062



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                    
Query: 431      tgctcttgaaaggtaactggttcgtacaggaaaagagctgtaagatattgac 482
                |||||||||||||||||||||| || || ||||| || ||||||||||||||
Sbjct: 21765815 tgctcttgaaaggtaactggtttgtgcaagaaaaaagttgtaagatattgac 21765866
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>dbj|AP004401.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0534A03
          Length = 153170

 Score =  131 bits (66), Expect = 3e-27
 Identities = 93/102 (91%)
 Strand = Plus / Plus

                                                                         
Query: 511   cagaacggcatggttccaaatggagaggcttcaaattcaaagagcaagcttacatcaatt 570
             ||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||| | |
Sbjct: 83146 cagaatggcatagttccaaatggagaggcttcaaattcaaagagcaagctaacatctact 83205

                                                       
Query: 571   catgatgtgttaaagggcttggttgattggctctgttctcag 612
             || ||||||||||  || ||||||||||||||||||||||||
Sbjct: 83206 caagatgtgttaagaggtttggttgattggctctgttctcag 83247



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 109/129 (84%)
 Strand = Plus / Plus

                                                                         
Query: 125   aggttctcaagcgggacattccatgggagacatatatgtcaactaaactgatcacttcga 184
             ||||||||||| |||| |||||||||||  |||| ||| ||| ||| |||||  |   ||
Sbjct: 81820 aggttctcaagagggatattccatgggaatcatacatggcaaataagctgatttccggga 81879

                                                                         
Query: 185   catgccttcagcttttaaggcgttatgaccacaaaccagaaagtcagagaggtccgttgc 244
             ||||||||||||||||  | ||||||||||||||||||||||| ||  ||||||| ||||
Sbjct: 81880 catgccttcagcttttgcgacgttatgaccacaaaccagaaagccaacgaggtcctttgc 81939

                      
Query: 245   ttgatgagg 253
             |||||||||
Sbjct: 81940 ttgatgagg 81948



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 65/71 (91%)
 Strand = Plus / Plus

                                                                         
Query: 358   aatcctaaacgagcagcactgttttacgacaaatctctctctggtgaagacatttacgat 417
             ||||||||||||||||||||||| || || || |||||||||||||||||||| ||||| 
Sbjct: 82331 aatcctaaacgagcagcactgttctatgataactctctctctggtgaagacatctacgac 82390

                        
Query: 418   cctttcctaag 428
             |||||||||||
Sbjct: 82391 cctttcctaag 82401



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 67/74 (90%)
 Strand = Plus / Plus

                                                                         
Query: 282   gaatatcttgcgaagcatctctaaggaagagaccgtggaatatgtgcttgccctcattga 341
             |||||||||||| | |||||| |||||||| || || ||||||||||||||||| |||||
Sbjct: 82172 gaatatcttgcggaacatctccaaggaagatactgttgaatatgtgcttgccctgattga 82231

                           
Query: 342   tgagatgcttgcag 355
             ||||||||||||||
Sbjct: 82232 tgagatgcttgcag 82245



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                 
Query: 431   tgctcttgaaaggtaactggttcgtacaggaaaagagctgtaagatattgac 482
             |||||||||||||||||||||| || || ||||| || ||||||||||||||
Sbjct: 82998 tgctcttgaaaggtaactggtttgtgcaagaaaaaagttgtaagatattgac 83049
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>gb|BT018553.1| Zea mays clone EL01N0439D12.d mRNA sequence
          Length = 1360

 Score =  129 bits (65), Expect = 1e-26
 Identities = 215/265 (81%)
 Strand = Plus / Plus

                                                                       
Query: 370 gcagcactgttttacgacaaatctctctctggtgaagacatttacgatcctttcctaaga 429
           |||||||||||||| ||  ||||| | || |||||||| ||||| || || ||| |||| 
Sbjct: 8   gcagcactgttttatgatcaatctttgtcgggtgaagatatttatgaaccgttcttaagg 67

                                                                       
Query: 430 ctgctcttgaaaggtaactggttcgtacaggaaaagagctgtaagatattgactcactta 489
            || | | |||||| |||||||| ||||| ||||| || |||||||||||||||    ||
Sbjct: 68  ttgttatggaaaggcaactggtttgtacaagaaaaaagttgtaagatattgactgttata 127

                                                                       
Query: 490 ataagtgcgagacctaagcttcagaacggcatggttccaaatggagaggcttcaaattca 549
           || |||||  |||| ||||||||||| ||||   ||||||||||||| ||||| ||||| 
Sbjct: 128 attagtgcacgaccgaagcttcagaatggcacacttccaaatggagatgcttcgaattcg 187

                                                                       
Query: 550 aagagcaagcttacatcaattcatgatgtgttaaagggcttggttgattggctctgttct 609
           |||||||||||||| ||||  || ||||| || |  || |||||||||||||||||||| 
Sbjct: 188 aagagcaagcttacttcaacacacgatgtattgagaggtttggttgattggctctgttca 247

                                    
Query: 610 cagctcaggaaccccacccacccga 634
           ||||| ||||| || || |||||||
Sbjct: 248 cagctgaggaatcctacacacccga 272
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>gb|AY225129.1| Suaeda maritima subsp. salsa putative vacuolar ATPase subunit H
           protein mRNA, complete cds
          Length = 1969

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 66/75 (88%)
 Strand = Plus / Plus

                                                                       
Query: 106 gccgagctcaccacggagcaggttctcaagcgggacattccatgggagacatatatgtca 165
           ||||| |||||||| || |||||||||||  |||||||||||||||||||||| ||| ||
Sbjct: 116 gccgaactcaccactgatcaggttctcaaaagggacattccatgggagacatacatgaca 175

                          
Query: 166 actaaactgatcact 180
           |||||  ||||||||
Sbjct: 176 actaagttgatcact 190
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>emb|AJ438592.1|MCR438592 Mesembryanthemum crystallinum mRNA for putative vacuolar ATPase
           subunit H (vha-H gene)
          Length = 1735

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                       
Query: 412 tacgatcctttcctaagactgctcttgaaaggtaactggttcgtacaggaaaagagctgt 471
           ||||| |||||  ||||| |||||| |||||| ||||||||| |||| || |||||||||
Sbjct: 447 tacgaaccttttataagattgctctggaaaggcaactggttcatacaagagaagagctgt 506

                 
Query: 472 aagata 477
           ||||||
Sbjct: 507 aagata 512



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                          
Query: 116 ccacggagcaggttctcaagcgggacattccatgggagacatatatg 162
           |||| ||||||||| | ||  ||||||||||||||||||||||||||
Sbjct: 151 ccactgagcaggttatgaaaagggacattccatgggagacatatatg 197
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>gb|AC125180.6| Mus musculus BAC clone RP23-322K1 from chromosome 14, complete sequence
          Length = 200560

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 534   agaggcttcaaattcaaagagcaag 558
             |||||||| ||||||||||||||||
Sbjct: 89313 agaggctttaaattcaaagagcaag 89337
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>gb|AC125076.4| Mus musculus BAC clone RP23-472F9 from chromosome 2, complete sequence
          Length = 165496

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 489   aataagtgcgagacctaagcttcag 513
             |||||||| ||||||||||||||||
Sbjct: 58995 aataagtgtgagacctaagcttcag 58971
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>emb|AL390058.13| Human DNA sequence from clone RP11-345E19 on chromosome X, complete
             sequence
          Length = 147798

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 208   tatgaccacaaaccagaaagtcaga 232
             |||||||||||| ||||||||||||
Sbjct: 99625 tatgaccacaaatcagaaagtcaga 99649
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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 93      cgcgatggatcgcgccgagct 113
               |||||||||||||||||||||
Sbjct: 4087522 cgcgatggatcgcgccgagct 4087542
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>gb|AC154563.2| Mus musculus BAC clone RP23-401E22 from chromosome 14, complete
            sequence
          Length = 206798

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 534  agaggcttcaaattcaaagagcaag 558
            |||||||| ||||||||||||||||
Sbjct: 2195 agaggctttaaattcaaagagcaag 2171
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 14      cgccggctgatccgcgcgggc 34
               |||||||||||||||||||||
Sbjct: 5347317 cgccggctgatccgcgcgggc 5347297
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>gb|AC101962.7| Mus musculus chromosome 3, clone RP24-222A19, complete sequence
          Length = 198284

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 153   gacatatatgtcaactaaactgatc 177
             |||||||||||||| ||||||||||
Sbjct: 86726 gacatatatgtcaattaaactgatc 86750
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>emb|AL845453.6| Mouse DNA sequence from clone RP23-296G5 on chromosome 2, complete
             sequence
          Length = 159565

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 489   aataagtgcgagacctaagcttcag 513
             |||||||| ||||||||||||||||
Sbjct: 32338 aataagtgtgagacctaagcttcag 32362
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>gb|AC113507.12| Mus musculus chromosome 3, clone RP23-376O10, complete sequence
          Length = 210262

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 153    gacatatatgtcaactaaactgatc 177
              |||||||||||||| ||||||||||
Sbjct: 195783 gacatatatgtcaattaaactgatc 195807
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>ref|XM_522561.1| PREDICTED: Pan troglodytes similar to RIM binding protein 2 (RIM-BP2)
            (LOC467161), mRNA
          Length = 9738

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 114  caccacggagcaggttctca 133
            ||||||||||||||||||||
Sbjct: 7076 caccacggagcaggttctca 7095
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>gb|AC162163.2| Mus musculus chromosome 1, clone RP23-258N15, complete sequence
          Length = 176915

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 152  agacatatatgtcaactaaactga 175
            |||||||| |||||||||||||||
Sbjct: 8068 agacatatgtgtcaactaaactga 8045
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>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 90     tgccgcgatggatcgcgccg 109
              ||||||||||||||||||||
Sbjct: 897709 tgccgcgatggatcgcgccg 897728
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>gb|AC100740.8| Mus musculus chromosome 1, clone RP24-421N21, complete sequence
          Length = 146835

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 152   agacatatatgtcaactaaactga 175
             |||||||| |||||||||||||||
Sbjct: 71317 agacatatgtgtcaactaaactga 71294
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>gb|AC002466.1| Homo sapiens BAC clone CTA-354L7 from 7, complete sequence
          Length = 78154

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 154   acatatatgtcaactaaact 173
             ||||||||||||||||||||
Sbjct: 10161 acatatatgtcaactaaact 10142
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>ref|XM_665604.1| Plasmodium berghei strain ANKA hypothetical protein (PB301350.00.0)
           partial mRNA
          Length = 561

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 455 tacaggaaaagagctgtaagatat 478
           ||||||||||||||||||| ||||
Sbjct: 58  tacaggaaaagagctgtaaaatat 81
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>gb|AC134858.6| Mus musculus BAC clone RP23-361A18 from chromosome 7, complete sequence
          Length = 214282

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 601   ctctgttctcagctcaggaaccccaccc 628
             |||||||| || ||||||||||||||||
Sbjct: 16112 ctctgttcacatctcaggaaccccaccc 16085
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>emb|BX572596.1| Rhodopseudomonas palustris CGA009 complete genome; segment 4/16
          Length = 348942

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 92    ccgcgatggatcgcgccgag 111
             ||||||||||||||||||||
Sbjct: 33612 ccgcgatggatcgcgccgag 33593
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>emb|AL732587.8| Mouse DNA sequence from clone RP23-268K22 on chromosome 11 Contains the
              3' end of the Galnt9 gene for
              UDP-N-acetyl-alpha-D-galactosamine: polypeptide
              N-acetylgalactosaminyltransferase 9, a novel gene, a novel
              gene (2310079P12Rik), the  Hand1 gene for heart and neural
              crest derivatives expressed transcript 1 (eHAND, Thing1), a
              mitochondrial ribosomal protein S16 pseudogene (Mrps16) and
              two CpG islands, complete sequence
          Length = 132671

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 613    ctcaggaaccccacccaccc 632
              ||||||||||||||||||||
Sbjct: 100549 ctcaggaaccccacccaccc 100568
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>gb|AC009372.6| Drosophila melanogaster 3L BAC RP98-48N4 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 175095

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 116   ccacggagcaggttctcaag 135
             ||||||||||||||||||||
Sbjct: 12284 ccacggagcaggttctcaag 12265
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>ref|NM_079427.2| Drosophila melanogaster UDP-glucose-glycoprotein glucosyltransferase
            CG6850-RA (Ugt), mRNA
          Length = 5323

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 116  ccacggagcaggttctcaag 135
            ||||||||||||||||||||
Sbjct: 2656 ccacggagcaggttctcaag 2675
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>gb|AF145049.1|AF145049 Streptomyces fradiae tylosin-biosynthetic regulatory gene cluster,
            complete sequence
          Length = 10467

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 17   cggctgatccgcgcgggccc 36
            ||||||||||||||||||||
Sbjct: 4705 cggctgatccgcgcgggccc 4686
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>gb|AY058353.1| Drosophila melanogaster GH12609 full length cDNA
          Length = 5314

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 116  ccacggagcaggttctcaag 135
            ||||||||||||||||||||
Sbjct: 2635 ccacggagcaggttctcaag 2654
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 94      gcgatggatcgcgccgagctcacc 117
               |||||||||||||||| |||||||
Sbjct: 2099801 gcgatggatcgcgccgggctcacc 2099824
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>gb|AC159039.2| Pan troglodytes BAC clone CH251-65A20 from chromosome unknown, complete
              sequence
          Length = 170427

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 154    acatatatgtcaactaaact 173
              ||||||||||||||||||||
Sbjct: 126298 acatatatgtcaactaaact 126279
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>emb|BX572624.15| Mouse DNA sequence from clone RP23-21G15 on chromosome 4, complete
            sequence
          Length = 20631

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 148  tgggagacatatatgtcaactaaa 171
            |||||||||||| |||||||||||
Sbjct: 9573 tgggagacatatttgtcaactaaa 9550
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>emb|AJ328099.1|HSA328099 Homo sapiens genomic sequence surrounding NotI site, clone
           NL4-DB23RS
          Length = 752

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 446 actggttcgtacaggaaaag 465
           ||||||||||||||||||||
Sbjct: 333 actggttcgtacaggaaaag 352
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>gb|AE003519.3| Drosophila melanogaster chromosome 3L, section 66 of 83 of the complete
              sequence
          Length = 294542

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 116    ccacggagcaggttctcaag 135
              ||||||||||||||||||||
Sbjct: 249725 ccacggagcaggttctcaag 249744
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>gb|AC166124.4| Mus musculus chromosome 1, clone RP23-105N9, complete sequence
          Length = 226615

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 152    agacatatatgtcaactaaactga 175
              |||||||| |||||||||||||||
Sbjct: 173574 agacatatgtgtcaactaaactga 173551
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>gb|U20554.1|DMU20554 Drosophila melanogaster UDP-glucose:glycoprotein glucosyltransferase
            mRNA, complete cds
          Length = 5317

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 116  ccacggagcaggttctcaag 135
            ||||||||||||||||||||
Sbjct: 2656 ccacggagcaggttctcaag 2675
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>emb|AL671916.5| Mouse DNA sequence from clone RP23-294O1 on chromosome X, complete
              sequence
          Length = 205436

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 417    tcctttcctaagactgctct 436
              ||||||||||||||||||||
Sbjct: 142637 tcctttcctaagactgctct 142618
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>dbj|AB032402.1| Mus musculus BSP gene for brain serine protease, complete cds
          Length = 9182

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 601  ctctgttctcagctcaggaaccccaccc 628
            |||||||| || ||||||||||||||||
Sbjct: 3219 ctctgttcacatctcaggaaccccaccc 3192


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,579,783
Number of Sequences: 3902068
Number of extensions: 4579783
Number of successful extensions: 75101
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 74894
Number of HSP's gapped (non-prelim): 198
length of query: 637
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 614
effective length of database: 17,143,297,704
effective search space: 10525984790256
effective search space used: 10525984790256
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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