| Clone Name | bags5a14 |
|---|---|
| Clone Library Name | barley_pub |
>BGLS_SCHCO (P29091) Beta-glucosidase (EC 3.2.1.21) (Gentiobiase) (Cellobiase)| (Beta-D-glucoside glucohydrolase) (Fragment) Length = 192 Score = 31.6 bits (70), Expect = 2.1 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%) Frame = -3 Query: 235 VMDWHSGDAADGVAMLSPATMPKVVPSET-GTILDGSWPEHGALEAALWS 89 ++ WH GDA V ++ A +V T G I+ +W EH ++A +WS Sbjct: 70 LLAWHDGDAL--VQAVADANENTIVAVNTVGAIITEAWIEHPNVKAVVWS 117
>EGR4_HUMAN (Q05215) Early growth response protein 4 (EGR-4) (AT133)| Length = 486 Score = 30.8 bits (68), Expect = 3.6 Identities = 25/79 (31%), Positives = 33/79 (41%), Gaps = 7/79 (8%) Frame = -3 Query: 220 SGDAADGVAMLSPATMPKVVPSETGTILDGSWPEHGALEAALWS-------CATQSTPRR 62 SGD AD + PA P S +G+ + PEH AL++ A P Sbjct: 60 SGDLADSCFLEGPAPTPPPGLSYSGSFFIQAVPEHPHDPEALFNLMSGVLGLAPFPGPEA 119 Query: 61 LASRGTLKAPVPSRAPTAL 5 ASR L AP P+ + L Sbjct: 120 AASRSPLDAPFPAGSDALL 138
>GSCR1_HUMAN (Q9NZM4) Glioma tumor suppressor candidate region gene 1 protein| Length = 1509 Score = 30.0 bits (66), Expect = 6.2 Identities = 17/51 (33%), Positives = 26/51 (50%) Frame = +3 Query: 96 SAASNAPCSGQEPSKIVPVSEGTTFGIVAGDNIATPSAASPECQSMTLCGP 248 S +AP Q+P+ PV++G G A D+ A+P+ A + L GP Sbjct: 670 SVIVSAPPPAQDPAPATPVAKGAGLGPQAPDSQASPAPAPQIPAAAPLKGP 720
>SORC3_MOUSE (Q8VI51) VPS10 domain-containing receptor SorCS3 precursor| Length = 1219 Score = 29.6 bits (65), Expect = 8.1 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 2/62 (3%) Frame = -3 Query: 193 MLSPATMPKVVPSETGTILDGSWPEH--GALEAALWSCATQSTPRRLASRGTLKAPVPSR 20 ++SPA+ P V+P + WPE A AA ++ P ASRG ++ Sbjct: 46 LVSPASRPPVLPPLLPRAAENRWPEELASARRAAAPRRRSRLEPLSQASRGEIRTEAAGM 105 Query: 19 AP 14 +P Sbjct: 106 SP 107
>NRFA_PASMU (Q9CPL4) Cytochrome c-552 precursor (EC 1.7.2.2) (Ammonia-forming| cytochrome c nitrite reductase) (Cytochrome c nitrite reductase) Length = 510 Score = 29.6 bits (65), Expect = 8.1 Identities = 11/26 (42%), Positives = 15/26 (57%) Frame = -3 Query: 124 PEHGALEAALWSCATQSTPRRLASRG 47 P+ G + A WSC + PR +A RG Sbjct: 143 PDAGPMPMACWSCKSPDVPRLIAERG 168 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 67,220,875 Number of Sequences: 219361 Number of extensions: 1162684 Number of successful extensions: 5271 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 5046 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5266 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6143359464 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)