>ref|XM_483192.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2237

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                  
Query: 222  aaagctctgttggttgcctagaacctgatcctgatgat 259
            ||||| ||| |||||||||||||||||| |||||||||
Sbjct: 1251 aaagcactgctggttgcctagaacctgaccctgatgat 1288



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 116  aaggcggaaccagacccagatgataatga 144
            |||| ||| ||||||||||||||||||||
Sbjct: 1109 aaggtggagccagacccagatgataatga 1137

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                      
Query: 222      aaagctctgttggttgcctagaacctgatcctgatgat 259
                ||||| ||| |||||||||||||||||| |||||||||
Sbjct: 24722798 aaagcactgctggttgcctagaacctgaccctgatgat 24722835



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 116      aaggcggaaccagacccagatgataatga 144
                |||| ||| ||||||||||||||||||||
Sbjct: 24722656 aaggtggagccagacccagatgataatga 24722684

>dbj|AP003892.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1345_D02
          Length = 159613

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                   
Query: 222   aaagctctgttggttgcctagaacctgatcctgatgat 259
             ||||| ||| |||||||||||||||||| |||||||||
Sbjct: 23599 aaagcactgctggttgcctagaacctgaccctgatgat 23636



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 116   aaggcggaaccagacccagatgataatga 144
             |||| ||| ||||||||||||||||||||
Sbjct: 23457 aaggtggagccagacccagatgataatga 23485

>dbj|AK101328.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034G12, full
            insert sequence
          Length = 2575

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                  
Query: 222  aaagctctgttggttgcctagaacctgatcctgatgat 259
            ||||| ||| |||||||||||||||||| |||||||||
Sbjct: 1588 aaagcactgctggttgcctagaacctgaccctgatgat 1625



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 116  aaggcggaaccagacccagatgataatga 144
            |||| ||| ||||||||||||||||||||
Sbjct: 1446 aaggtggagccagacccagatgataatga 1474

>gb|AY110296.1| Zea mays CL11152_1 mRNA sequence
          Length = 1213

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 236 tgcctagaacctgatcctgatgat 259
           ||||||||||||||||||||||||
Sbjct: 143 tgcctagaacctgatcctgatgat 166



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 241 agaacctgatcctgatgatact 262
           ||||||||||||||||||||||
Sbjct: 388 agaacctgatcctgatgatact 409

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 93      aggattttattctggaaaatgt 114
               ||||||||||||||||||||||
Sbjct: 8860714 aggattttattctggaaaatgt 8860693

>gb|AC139168.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1364E02,
             complete sequence
          Length = 126027

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 93    aggattttattctggaaaatgt 114
             ||||||||||||||||||||||
Sbjct: 51602 aggattttattctggaaaatgt 51581

>gb|AC135208.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1364E02,
              complete sequence
          Length = 112265

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 93     aggattttattctggaaaatgt 114
              ||||||||||||||||||||||
Sbjct: 103867 aggattttattctggaaaatgt 103846

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 93      aggattttattctggaaaatgt 114
               ||||||||||||||||||||||
Sbjct: 8858549 aggattttattctggaaaatgt 8858528

>emb|AL626762.10| Mouse DNA sequence from clone RP23-68F3 on chromosome 4, complete
              sequence
          Length = 228767

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 48     atgtgcaaggtacacaagcaga 69
              ||||||||||||||||||||||
Sbjct: 116449 atgtgcaaggtacacaagcaga 116428

>emb|BX571979.8| Zebrafish DNA sequence from clone DKEYP-51C11 in linkage group 13,
              complete sequence
          Length = 165275

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 165    caattgtgacatcaggatcagcagg 189
              |||| ||||||||||||||||||||
Sbjct: 121180 caatagtgacatcaggatcagcagg 121204

>gb|AC147038.2| Pan troglodytes BAC clone RP43-112D23 from 7, complete sequence
          Length = 192615

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 93   aggattttattctggaaaat 112
            ||||||||||||||||||||
Sbjct: 4084 aggattttattctggaaaat 4103

>gb|AC127335.4| Mus musculus BAC clone RP23-150G24 from 8, complete sequence
          Length = 215910

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 207   agcagaatgccaagaaaagctctg 230
             |||||||||||||| |||||||||
Sbjct: 71452 agcagaatgccaaggaaagctctg 71475

>emb|AL356219.12| Human DNA sequence from clone RP11-430C15 on chromosome 9 Contains part
              of the PIP5K1B gene for phosphatidylinositol-4-phosphate
              5-kinase, type I, beta (MSS4, STM7) and the 5' end of a
              novel gene, complete sequence
          Length = 115469

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 92     gaggattttattctggaaaatgtg 115
              ||||||||| ||||||||||||||
Sbjct: 114752 gaggattttcttctggaaaatgtg 114729

>emb|AL162730.26| Human DNA sequence from clone RP11-265B8 on chromosome 9 Contains the
            3' end of the PIP5K1B gene for
            phosphatidylinositol-4-phosphate 5-kinase, type I, beta
            (MSS4, STM7), the PRKACG gene for protein kinase,
            cAMP-dependent, catalytic, gamma (KAPG), the FRDA gene
            for Friedreich ataxia (FA, FARR), a novel gene and three
            CpG islands, complete sequence
          Length = 171381

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 92   gaggattttattctggaaaatgtg 115
            ||||||||| ||||||||||||||
Sbjct: 1283 gaggattttcttctggaaaatgtg 1260

>gb|AF006715.1|AF006715 Anguilla anguilla cytochrome b (cytb) gene, mitochondrial gene
           encoding mitochondrial protein, complete cds
          Length = 1140

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 296 ggtgagcatgataatgaacc 315
           ||||||||||||||||||||
Sbjct: 711 ggtgagcatgataatgaacc 692

>gb|AF006714.1|AF006714 Anguilla anguilla cytochrome b (cytb) gene, mitochondrial gene
           encoding mitochondrial protein, complete cds
          Length = 1140

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 296 ggtgagcatgataatgaacc 315
           ||||||||||||||||||||
Sbjct: 711 ggtgagcatgataatgaacc 692

>gb|AC009110.10| Homo sapiens chromosome 16 clone RP11-467O15, complete sequence
          Length = 188763

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 258    atactgcagatgttgacatg 277
              ||||||||||||||||||||
Sbjct: 111836 atactgcagatgttgacatg 111855

>gb|AC157523.2| Pan troglodytes BAC clone CH251-526G6 from chromosome unknown, complete
             sequence
          Length = 165776

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 258   atactgcagatgttgacatg 277
             ||||||||||||||||||||
Sbjct: 79802 atactgcagatgttgacatg 79821

>gb|AC147103.3| Pan troglodytes BAC clone RP43-31L11 from chromosome 7, complete
             sequence
          Length = 222089

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 93    aggattttattctggaaaat 112
             ||||||||||||||||||||
Sbjct: 76223 aggattttattctggaaaat 76204

>gb|AC079304.6| Homo sapiens BAC clone RP11-389K20 from 2, complete sequence
          Length = 188132

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 210    agaatgccaagaaaagctct 229
              ||||||||||||||||||||
Sbjct: 178251 agaatgccaagaaaagctct 178232

>gb|AC074093.6| Homo sapiens BAC clone RP11-206I11 from 2, complete sequence
          Length = 155182

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    ggtacacaagcagaacctga 75
             ||||||||||||||||||||
Sbjct: 17208 ggtacacaagcagaacctga 17227

>gb|AC078815.22| Homo sapiens 12q BAC RP11-766N7 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 163475

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 90    gtgaggattttattctggaa 109
             ||||||||||||||||||||
Sbjct: 77251 gtgaggattttattctggaa 77270

>dbj|AP007233.1| Anguilla anguilla mitochondrial DNA, complete genome
          Length = 16683

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 296   ggtgagcatgataatgaacc 315
             ||||||||||||||||||||
Sbjct: 15142 ggtgagcatgataatgaacc 15123

>dbj|BA000011.4| Thermoplasma volcanium GSS1 DNA, complete genome
          Length = 1584804

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 276    tgcttaacaaggagatcgat 295
              ||||||||||||||||||||
Sbjct: 385774 tgcttaacaaggagatcgat 385793

>gb|AC121114.10| Mus musculus chromosome 15, clone RP23-63M19, complete sequence
          Length = 337658

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 27    ctaaatctgtggagagatat 46
             ||||||||||||||||||||
Sbjct: 87889 ctaaatctgtggagagatat 87908

>emb|BX000707.9| Zebrafish DNA sequence from clone DKEY-187I8, complete sequence
          Length = 194542

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 175    atcaggatcagcaggttttg 194
              ||||||||||||||||||||
Sbjct: 157692 atcaggatcagcaggttttg 157711

>dbj|AP004467.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT06K11, TM0002,
              complete sequence
          Length = 106023

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 312    aacctgatcctgatgatggt 331
              ||||||||||||||||||||
Sbjct: 103906 aacctgatcctgatgatggt 103925

>gb|M19377.1|PF3COMNY Bacteriophage Pf3 from Pseudomonas aeruginosa (New York strain),
            complete genome
          Length = 5833

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 309  atgaacctgatcctgatgat 328
            ||||||||||||||||||||
Sbjct: 1161 atgaacctgatcctgatgat 1180

>gb|M11912.1|PF3COMN Bacteriophage Pf3 from Pseudomonas aeruginosa (Nijmegen strain),
            complete genome
          Length = 5833

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 309  atgaacctgatcctgatgat 328
            ||||||||||||||||||||
Sbjct: 1161 atgaacctgatcctgatgat 1180

>dbj|AB021776.1| Anguilla anguilla mitochondrial cytb gene for cytochrome b,
           complete cds
          Length = 1140

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 296 ggtgagcatgataatgaacc 315
           ||||||||||||||||||||
Sbjct: 711 ggtgagcatgataatgaacc 692


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,090,174
Number of Sequences: 3902068
Number of extensions: 4090174
Number of successful extensions: 98642
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98435
Number of HSP's gapped (non-prelim): 207
length of query: 445
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 423
effective length of database: 17,147,199,772
effective search space: 7253265503556
effective search space used: 7253265503556
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)