| Clone Name | bags5a05 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X86903.1|TAFKBP70 T.aestivum mRNA for peptidylprolyl cis-trans isomerase, FK506 Length = 2027 Score = 995 bits (502), Expect = 0.0 Identities = 551/568 (97%) Strand = Plus / Plus Query: 12 aaagatggtggcatattcaagaagatattgaaggagggagataaatgggagaccccaaag 71 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 565 aaagatggtggcatattcaagaagatattgaaggagggagataaatgggagaacccaaag 624 Query: 72 gatcctgatgaagtctttgtcaaatatgaggcccggctcgaggatggtactgttgtgtcc 131 |||||||||||||| ||||| ||||||||||| ||||| ||||||||||||||||||||| Sbjct: 625 gatcctgatgaagtatttgtgaaatatgaggctcggcttgaggatggtactgttgtgtcc 684 Query: 132 aagtctgagggggttgaatttactgttaaagatggacacctctgccctgcattggcgaaa 191 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| Sbjct: 685 aagtctgagggggttgaatttactgttaaagatggacacctctgccctgcactggccaaa 744 Query: 192 gctgttaaaaccatgaaaaaaggagagaaggtgctcctcgcggtcaagccacagtatgga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 745 gctgttaaaaccatgaaaaaaggagagaaggtgctcctcgcggtcaagccacagtatgga 804 Query: 252 tttggtgagatgggtagaccagcagctggcgagggaggtgctgtgccaccaaatgctagt 311 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 805 tttggtgagatgggtagaccagcagctggtgagggaggtgctgtgccaccaaatgccagc 864 Query: 312 cttattattgaccttgagctggtttcatggaagactgtcacagaaataggggatgataag 371 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 865 cttgttattgaccttgagctggtttcatggaagactgtcacagaaataggggatgataag 924 Query: 372 aagatcctcaaaaaagttctcaaggagggcgaaggatatgaacgtcccaatgagggtgca 431 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 925 aagatcctcaaaaaagttctcaaggagnncgaaggatatgaacgtcccaatgagggtgca 984 Query: 432 gttgttacagtcaaaataactggaaaacttcaagatggcacagtcttcttaaagaagggg 491 |||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||| Sbjct: 985 gttgttacagtcaaaataactggaaaacttcaagatgggacagtattcttgaagaagggg 1044 Query: 492 catgatgaacaagagccatttgaatttaagactgatgaagatgcggttattgagggtctt 551 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1045 catgatgaacaagagccatttgaatttaagactgatgaagaggcggttattgagggtctt 1104 Query: 552 gatcgtgctgtgctaaacatgaagaagg 579 |||||||||||||||||||||||||||| Sbjct: 1105 gatcgtgctgtgctaaacatgaagaagg 1132
>ref|XM_483423.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2100 Score = 555 bits (280), Expect = e-155 Identities = 502/576 (87%) Strand = Plus / Plus Query: 2 ggacatttgcaaagatggtggcatattcaagaagatattgaaggagggagataaatggga 61 |||||||||| |||||||||| ||||||||||||||| ||||||||||||| |||||||| Sbjct: 572 ggacatttgccaagatggtggtatattcaagaagatactgaaggagggagaaaaatggga 631 Query: 62 gaccccaaaggatcctgatgaagtctttgtcaaatatgaggcccggctcgaggatggtac 121 || |||||| |||| ||||||||| ||||| ||||||||||| ||||| |||||||| || Sbjct: 632 gaacccaaaagatcttgatgaagtatttgtgaaatatgaggctcggcttgaggatggcac 691 Query: 122 tgttgtgtccaagtctgagggggttgaatttactgttaaagatggacacctctgccctgc 181 |||| | || ||||||||||| | ||||||||||||||||||||| | |||||||||| Sbjct: 692 tgttatatcaaagtctgagggcgctgaatttactgttaaagatggtttcttctgccctgc 751 Query: 182 attggcgaaagctgttaaaaccatgaaaaaaggagagaaggtgctcctcgcggtcaagcc 241 ||||||||||||| |||||||||||||||| |||||| |||||||| | || ||||| Sbjct: 752 gctggcgaaagctgtcaaaaccatgaaaaaagcagagaaagtgctccttacagttaagcc 811 Query: 242 acagtatggatttggtgagatgggtagaccagcagctggcgagggaggtgctgtgccacc 301 ||| |||||||||||||||| ||||||||||||||||| |||| ||||||||||||||| Sbjct: 812 acaatatggatttggtgagaatggtagaccagcagctggtgaggaaggtgctgtgccacc 871 Query: 302 aaatgctagtcttattattgaccttgagctggtttcatggaagactgtcacagaaatagg 361 |||||| | |||| || || | |||||| ||||||||||||| || |||||||||||||| Sbjct: 872 aaatgccactcttcttgttaatcttgagttggtttcatggaaaacagtcacagaaatagg 931 Query: 362 ggatgataagaagatcctcaaaaaagttctcaaggagggcgaaggatatgaacgtcccaa 421 ||||||||||| ||| | || |||||||| | |||||| ||| ||||| || ||||| Sbjct: 932 tgatgataagaaaatcttgaagaaagttctgacggagggtacagggtatgagcggcccaa 991 Query: 422 tgagggtgcagttgttacagtcaaaataactggaaaacttcaagatggcacagtcttctt 481 ||| ||||||||||||| |||||||||||||||||||||||| ||||| ||| | || Sbjct: 992 tgaaggtgcagttgttaaagtcaaaataactggaaaacttcaggatggtacaatatttac 1051 Query: 482 aaagaaggggcatgatgaacaagagccatttgaatttaagactgatgaagatgcggttat 541 |||||||||||||||||||| ||||||||||||||| |||||||||||||| | ||| || Sbjct: 1052 aaagaaggggcatgatgaaccagagccatttgaattcaagactgatgaagaggaggtcat 1111 Query: 542 tgagggtcttgatcgtgctgtgctaaacatgaagaa 577 ||| ||| |||| ||||||||||||||||||||||| Sbjct: 1112 tgatggtattgaccgtgctgtgctaaacatgaagaa 1147
>dbj|AK103172.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033121G16, full insert sequence Length = 2100 Score = 555 bits (280), Expect = e-155 Identities = 502/576 (87%) Strand = Plus / Plus Query: 2 ggacatttgcaaagatggtggcatattcaagaagatattgaaggagggagataaatggga 61 |||||||||| |||||||||| ||||||||||||||| ||||||||||||| |||||||| Sbjct: 572 ggacatttgccaagatggtggtatattcaagaagatactgaaggagggagaaaaatggga 631 Query: 62 gaccccaaaggatcctgatgaagtctttgtcaaatatgaggcccggctcgaggatggtac 121 || |||||| |||| ||||||||| ||||| ||||||||||| ||||| |||||||| || Sbjct: 632 gaacccaaaagatcttgatgaagtatttgtgaaatatgaggctcggcttgaggatggcac 691 Query: 122 tgttgtgtccaagtctgagggggttgaatttactgttaaagatggacacctctgccctgc 181 |||| | || ||||||||||| | ||||||||||||||||||||| | |||||||||| Sbjct: 692 tgttatatcaaagtctgagggcgctgaatttactgttaaagatggtttcttctgccctgc 751 Query: 182 attggcgaaagctgttaaaaccatgaaaaaaggagagaaggtgctcctcgcggtcaagcc 241 ||||||||||||| |||||||||||||||| |||||| |||||||| | || ||||| Sbjct: 752 gctggcgaaagctgtcaaaaccatgaaaaaagcagagaaagtgctccttacagttaagcc 811 Query: 242 acagtatggatttggtgagatgggtagaccagcagctggcgagggaggtgctgtgccacc 301 ||| |||||||||||||||| ||||||||||||||||| |||| ||||||||||||||| Sbjct: 812 acaatatggatttggtgagaatggtagaccagcagctggtgaggaaggtgctgtgccacc 871 Query: 302 aaatgctagtcttattattgaccttgagctggtttcatggaagactgtcacagaaatagg 361 |||||| | |||| || || | |||||| ||||||||||||| || |||||||||||||| Sbjct: 872 aaatgccactcttcttgttaatcttgagttggtttcatggaaaacagtcacagaaatagg 931 Query: 362 ggatgataagaagatcctcaaaaaagttctcaaggagggcgaaggatatgaacgtcccaa 421 ||||||||||| ||| | || |||||||| | |||||| ||| ||||| || ||||| Sbjct: 932 tgatgataagaaaatcttgaagaaagttctgacggagggtacagggtatgagcggcccaa 991 Query: 422 tgagggtgcagttgttacagtcaaaataactggaaaacttcaagatggcacagtcttctt 481 ||| ||||||||||||| |||||||||||||||||||||||| ||||| ||| | || Sbjct: 992 tgaaggtgcagttgttaaagtcaaaataactggaaaacttcaggatggtacaatatttac 1051 Query: 482 aaagaaggggcatgatgaacaagagccatttgaatttaagactgatgaagatgcggttat 541 |||||||||||||||||||| ||||||||||||||| |||||||||||||| | ||| || Sbjct: 1052 aaagaaggggcatgatgaaccagagccatttgaattcaagactgatgaagaggaggtcat 1111 Query: 542 tgagggtcttgatcgtgctgtgctaaacatgaagaa 577 ||| ||| |||| ||||||||||||||||||||||| Sbjct: 1112 tgatggtattgaccgtgctgtgctaaacatgaagaa 1147
>gb|AY104504.1| Zea mays PCO127462 mRNA sequence Length = 2108 Score = 505 bits (255), Expect = e-140 Identities = 497/577 (86%), Gaps = 3/577 (0%) Strand = Plus / Plus Query: 3 gacatttgcaaagatggtggcatattcaagaagatattgaaggagggagataaatgggag 62 ||||||||||||||||| ||||||||||||||||| | || |||||||| ||||||||| Sbjct: 603 gacatttgcaaagatggcggcatattcaagaagatccttaaagagggagagaaatgggag 662 Query: 63 accccaaaggatcctgatgaagtctttgtcaaatatgaggcccggctcgaggatggtact 122 | ||||||||||||||||||||| |||| |||||||||||||| || || ||||||||| Sbjct: 663 aacccaaaggatcctgatgaagtacttgtgaaatatgaggcccgtctggaagatggtact 722 Query: 123 gttgtgtccaagtctgagggggttgaatttactgttaaagatggacacctctgccctgca 182 ||||| |||||||||||||||||||| |||||||| |||||||| || | || ||||| Sbjct: 723 gttgtatccaagtctgagggggttgagtttactgtgaaagatggctacttttgtcctgcc 782 Query: 183 ttggcgaaagctgttaaaaccatgaaaaaaggagagaaggtgctcctcgcggtcaagcca 242 |||| |||||||| |||||||||||||| | ||||||||||||||| | || |||||| Sbjct: 783 ctggccaaagctgtcaaaaccatgaaaaaggcagagaaggtgctccttacagtaaagcca 842 Query: 243 cagtatggatttggtgagatgggtagaccagcagctggcgagggaggtgctgtgccacca 302 || |||||||||||||||| |||||||||||||||||| |||| |||||||||||| ||| Sbjct: 843 caatatggatttggtgagaagggtagaccagcagctggagaggaaggtgctgtgccgcca 902 Query: 303 aatgctagtcttattattgaccttgagctggtttcatggaagactgtcacagaaataggg 362 |||||| || | |||||||||||| || ||||||||||||||||||||||||| ||| Sbjct: 903 aatgcttcgctgctcattgaccttgagttgatttcatggaagactgtcacagaaattggg 962 Query: 363 gatgataagaagatcctcaaaaaagttctcaaggagggcgaaggatatgaacgtcccaat 422 ||||||||||| ||||| || || |||||||||||||| ||||| ||||| ||||||||| Sbjct: 963 gatgataagaaaatccttaagaaggttctcaaggagggagaaggttatgagcgtcccaat 1022 Query: 423 gagggtgcagttgttacagtcaaaataactggaaaacttcaagatggcacagtcttctta 482 |||||||| |||||| ||||||||| | ||||| ||||| |||||| | || || | Sbjct: 1023 gagggtgctgttgttgaagtcaaaattatcggaaagcttcaggatggcgcggtgtttaca 1082 Query: 483 aagaaggggcatgatgaacaagagccatttgaatttaagactgatgaagatgcggttatt 542 |||||||||||||| | ||||||||||| |||| ||||| |||||||| | |||||| Sbjct: 1083 aagaaggggcatgacg---aagagccatttaaattcaagaccgatgaagaggaagttatt 1139 Query: 543 gagggtcttgatcgtgctgtgctaaacatgaagaagg 579 | |||||||||||||||||| | ||||||||||||| Sbjct: 1140 gccggtcttgatcgtgctgtgttgaacatgaagaagg 1176
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 167 bits (84), Expect = 5e-38 Identities = 165/192 (85%) Strand = Plus / Plus Query: 247 atggatttggtgagatgggtagaccagcagctggcgagggaggtgctgtgccaccaaatg 306 ||||||||||||||| ||||||||||||||||| |||| |||||||||||||||||||| Sbjct: 26133782 atggatttggtgagaatggtagaccagcagctggtgaggaaggtgctgtgccaccaaatg 26133841 Query: 307 ctagtcttattattgaccttgagctggtttcatggaagactgtcacagaaataggggatg 366 | | |||| || || | |||||| ||||||||||||| || |||||||||||||| |||| Sbjct: 26133842 ccactcttcttgttaatcttgagttggtttcatggaaaacagtcacagaaataggtgatg 26133901 Query: 367 ataagaagatcctcaaaaaagttctcaaggagggcgaaggatatgaacgtcccaatgagg 426 ||||||| ||| | || |||||||| | |||||| ||| ||||| || |||||||| | Sbjct: 26133902 ataagaaaatcttgaagaaagttctgacggagggtacagggtatgagcggcccaatgaag 26133961 Query: 427 gtgcagttgtta 438 |||||||||||| Sbjct: 26133962 gtgcagttgtta 26133973 Score = 115 bits (58), Expect = 2e-22 Identities = 85/94 (90%) Strand = Plus / Plus Query: 438 acagtcaaaataactggaaaacttcaagatggcacagtcttcttaaagaaggggcatgat 497 |||||||||||||||||||||||||| ||||| ||| | || |||||||||||||||| Sbjct: 26134089 acagtcaaaataactggaaaacttcaggatggtacaatatttacaaagaaggggcatgat 26134148 Query: 498 gaacaagagccatttgaatttaagactgatgaag 531 |||| ||||||||||||||| ||||||||||||| Sbjct: 26134149 gaaccagagccatttgaattcaagactgatgaag 26134182 Score = 113 bits (57), Expect = 7e-22 Identities = 81/89 (91%) Strand = Plus / Plus Query: 2 ggacatttgcaaagatggtggcatattcaagaagatattgaaggagggagataaatggga 61 |||||||||| |||||||||| ||||||||||||||| ||||||||||||| |||||||| Sbjct: 26133291 ggacatttgccaagatggtggtatattcaagaagatactgaaggagggagaaaaatggga 26133350 Query: 62 gaccccaaaggatcctgatgaagtctttg 90 || |||||| |||| ||||||||| |||| Sbjct: 26133351 gaacccaaaagatcttgatgaagtatttg 26133379 Score = 83.8 bits (42), Expect = 6e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 93 aaatatgaggcccggctcgaggatggtactgttgtgtccaagtctgagggggttgaattt 152 ||||||||||| ||||| |||||||| |||||| | || ||||||||||| | ||||||| Sbjct: 26133454 aaatatgaggctcggcttgaggatggcactgttatatcaaagtctgagggcgctgaattt 26133513 Query: 153 actgttaaagatgg 166 |||||||||||||| Sbjct: 26133514 actgttaaagatgg 26133527 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Plus Query: 172 tctgccctgcattggcgaaagctgttaaaaccatgaaaaaaggagagaaggtgctcct 229 |||||||||| ||||||||||||| |||||||||||||||| |||||| |||||||| Sbjct: 26133619 tctgccctgcgctggcgaaagctgtcaaaaccatgaaaaaagcagagaaagtgctcct 26133676 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 540 attgagggtcttgatcgtgctgtgctaaacatgaagaa 577 ||||| ||| |||| ||||||||||||||||||||||| Sbjct: 26134304 attgatggtattgaccgtgctgtgctaaacatgaagaa 26134341
>dbj|AP003888.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1191_A10 Length = 140643 Score = 167 bits (84), Expect = 5e-38 Identities = 165/192 (85%) Strand = Plus / Plus Query: 247 atggatttggtgagatgggtagaccagcagctggcgagggaggtgctgtgccaccaaatg 306 ||||||||||||||| ||||||||||||||||| |||| |||||||||||||||||||| Sbjct: 77713 atggatttggtgagaatggtagaccagcagctggtgaggaaggtgctgtgccaccaaatg 77772 Query: 307 ctagtcttattattgaccttgagctggtttcatggaagactgtcacagaaataggggatg 366 | | |||| || || | |||||| ||||||||||||| || |||||||||||||| |||| Sbjct: 77773 ccactcttcttgttaatcttgagttggtttcatggaaaacagtcacagaaataggtgatg 77832 Query: 367 ataagaagatcctcaaaaaagttctcaaggagggcgaaggatatgaacgtcccaatgagg 426 ||||||| ||| | || |||||||| | |||||| ||| ||||| || |||||||| | Sbjct: 77833 ataagaaaatcttgaagaaagttctgacggagggtacagggtatgagcggcccaatgaag 77892 Query: 427 gtgcagttgtta 438 |||||||||||| Sbjct: 77893 gtgcagttgtta 77904 Score = 115 bits (58), Expect = 2e-22 Identities = 85/94 (90%) Strand = Plus / Plus Query: 438 acagtcaaaataactggaaaacttcaagatggcacagtcttcttaaagaaggggcatgat 497 |||||||||||||||||||||||||| ||||| ||| | || |||||||||||||||| Sbjct: 78020 acagtcaaaataactggaaaacttcaggatggtacaatatttacaaagaaggggcatgat 78079 Query: 498 gaacaagagccatttgaatttaagactgatgaag 531 |||| ||||||||||||||| ||||||||||||| Sbjct: 78080 gaaccagagccatttgaattcaagactgatgaag 78113 Score = 113 bits (57), Expect = 7e-22 Identities = 81/89 (91%) Strand = Plus / Plus Query: 2 ggacatttgcaaagatggtggcatattcaagaagatattgaaggagggagataaatggga 61 |||||||||| |||||||||| ||||||||||||||| ||||||||||||| |||||||| Sbjct: 77222 ggacatttgccaagatggtggtatattcaagaagatactgaaggagggagaaaaatggga 77281 Query: 62 gaccccaaaggatcctgatgaagtctttg 90 || |||||| |||| ||||||||| |||| Sbjct: 77282 gaacccaaaagatcttgatgaagtatttg 77310 Score = 83.8 bits (42), Expect = 6e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 93 aaatatgaggcccggctcgaggatggtactgttgtgtccaagtctgagggggttgaattt 152 ||||||||||| ||||| |||||||| |||||| | || ||||||||||| | ||||||| Sbjct: 77385 aaatatgaggctcggcttgaggatggcactgttatatcaaagtctgagggcgctgaattt 77444 Query: 153 actgttaaagatgg 166 |||||||||||||| Sbjct: 77445 actgttaaagatgg 77458 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Plus Query: 172 tctgccctgcattggcgaaagctgttaaaaccatgaaaaaaggagagaaggtgctcct 229 |||||||||| ||||||||||||| |||||||||||||||| |||||| |||||||| Sbjct: 77550 tctgccctgcgctggcgaaagctgtcaaaaccatgaaaaaagcagagaaagtgctcct 77607 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 540 attgagggtcttgatcgtgctgtgctaaacatgaagaa 577 ||||| ||| |||| ||||||||||||||||||||||| Sbjct: 78235 attgatggtattgaccgtgctgtgctaaacatgaagaa 78272
>gb|AY389590.1| Hyacinthus orientalis peptidyl-prolyl cis-trans isomerase mRNA, partial cds Length = 648 Score = 73.8 bits (37), Expect = 6e-10 Identities = 274/353 (77%) Strand = Plus / Plus Query: 144 gttgaatttactgttaaagatggacacctctgccctgcattggcgaaagctgttaaaacc 203 |||||||| || ||||||||||| || |||| ||||| | || || ||||| || || Sbjct: 26 gttgaattcacggttaaagatgggtacttctgtcctgcgctagctaaggctgtcaagaca 85 Query: 204 atgaaaaaaggagagaaggtgctcctcgcggtcaagccacagtatggatttggtgagatg 263 ||||| ||||| || ||||| || ||| | || || ||||| |||||||||||||||| | Sbjct: 86 atgaagaaaggggaaaaggttcttctcactgtgaaaccacaatatggatttggtgagaag 145 Query: 264 ggtagaccagcagctggcgagggaggtgctgtgccaccaaatgctagtcttattattgac 323 ||||| |||| ||||||||| ||| |||| || |||||||| | | |||| Sbjct: 146 ggtaggccagtttctggcgaggaaggcactgtccccccaaatgccaccttgcacgttgat 205 Query: 324 cttgagctggtttcatggaagactgtcacagaaataggggatgataagaagatcctcaaa 383 |||||||| || || ||||||||||| || || || || ||||| || |||||| | || Sbjct: 206 cttgagcttgtctcctggaagactgttactgagattggtgatgacaaaaagatcgtgaag 265 Query: 384 aaagttctcaaggagggcgaaggatatgaacgtcccaatgagggtgcagttgttacagtc 443 ||| |||||||||| || || || |||||||| || ||||| || |||||||||| ||| Sbjct: 266 aaaattctcaaggaaggggagggttatgaacgaccgaatgatggggcagttgttaaagtg 325 Query: 444 aaaataactggaaaacttcaagatggcacagtcttcttaaagaaggggcatga 496 ||| ||| |||||| || ||||| || || ||||| | |||||||| ||||| Sbjct: 326 aaattaattggaaagctgcaagacgggactgtctttgtgaagaagggtcatga 378
>ref|NM_124233.2| Arabidopsis thaliana FK506 binding / calmodulin binding / peptidyl-prolyl cis-trans isomerase AT5G48570 mRNA, complete cds Length = 2130 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 192 gctgttaaaaccatgaaaaaaggagagaaggtgctcctcgcggtcaagccacagtatgga 251 ||||| ||||||||||||| ||| |||||||| ||||| | || |||||||| |||||| Sbjct: 847 gctgtcaaaaccatgaaaagaggggagaaggttctcctgactgtgaagccacaatatgga 906 Query: 252 tttgg 256 ||||| Sbjct: 907 tttgg 911 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 318 attgaccttgagctggtttcatggaagactgt 349 |||||||||||| ||||||| ||||||||||| Sbjct: 976 attgaccttgagttggtttcttggaagactgt 1007 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 390 ctcaaggagggcgaaggatatgaacgtcccaatga 424 |||||||| || ||||||||||| ||||||||||| Sbjct: 1048 ctcaaggaaggagaaggatatgagcgtcccaatga 1082
>emb|BX831626.1|CNS0A0YB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH1ZC07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1890 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 192 gctgttaaaaccatgaaaaaaggagagaaggtgctcctcgcggtcaagccacagtatgga 251 ||||| ||||||||||||| ||| |||||||| ||||| | || |||||||| |||||| Sbjct: 717 gctgtcaaaaccatgaaaagaggggagaaggttctcctgactgtgaagccacaatatgga 776 Query: 252 tttgg 256 ||||| Sbjct: 777 tttgg 781 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 318 attgaccttgagctggtttcatggaagactgt 349 ||||||||||| ||||||| ||||||||||| Sbjct: 846 attgaccttgaattggtttcttggaagactgt 877
>gb|AC171266.22| Medicago truncatula clone mth2-14o4, complete sequence Length = 137052 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 30 aagaagatattgaaggagggagataaatgggagaccccaaaggatcctgatgaagt 85 ||||||||| | |||||||| || |||||||| | ||||||||||| ||||||||| Sbjct: 40615 aagaagatagttaaggagggggagaaatgggaaaacccaaaggatcttgatgaagt 40670
>ref|XM_472023.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1758 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 216 gagaaggtgctcctcgcggtcaagccacagtatggatttggtgag 260 |||||||| |||||| | ||||||||||| ||||| ||||||||| Sbjct: 691 gagaaggtcctcctcactgtcaagccacaatatggctttggtgag 735
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 57 tgggagaccccaaaggatcctgatgaagt 85 ||||||| ||||||||||||||||||||| Sbjct: 11261770 tgggagaacccaaaggatcctgatgaagt 11261742
>gb|AC145491.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAb0085H08, from chromosome 3, complete sequence Length = 130656 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 57 tgggagaccccaaaggatcctgatgaagt 85 ||||||| ||||||||||||||||||||| Sbjct: 40723 tgggagaacccaaaggatcctgatgaagt 40695
>gb|AC118340.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0085H08, from chromosome 3, complete sequence Length = 126708 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 57 tgggagaccccaaaggatcctgatgaagt 85 ||||||| ||||||||||||||||||||| Sbjct: 19278 tgggagaacccaaaggatcctgatgaagt 19306
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Plus Query: 384 aaagttctcaaggagggcgaaggatatgaacgtcccaatgagggtgcag 432 ||||||||||||||||| |||| ||||| |||| |||||| ||||||| Sbjct: 3568168 aaagttctcaaggagggtcaagggtatgagcgtcacaatgaaggtgcag 3568216 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 15 gatggtggcatattcaagaagat 37 ||||||||||||||||||||||| Sbjct: 15401365 gatggtggcatattcaagaagat 15401387
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 57 tgggagaccccaaaggatcctgatgaagt 85 ||||||| ||||||||||||||||||||| Sbjct: 11258533 tgggagaacccaaaggatcctgatgaagt 11258505
>gb|AF140495.2| Oryza sativa (japonica cultivar-group) FK506-binding protein mRNA, complete cds Length = 2233 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 216 gagaaggtgctcctcgcggtcaagccacagtatggatttggtgag 260 |||||||| |||||| | ||||||||||| ||||| ||||||||| Sbjct: 774 gagaaggtcctcctcactgtcaagccacaatatggctttggtgag 818
>dbj|AP003842.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1641_C04 Length = 134367 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Plus Query: 384 aaagttctcaaggagggcgaaggatatgaacgtcccaatgagggtgcag 432 ||||||||||||||||| |||| ||||| |||| |||||| ||||||| Sbjct: 37485 aaagttctcaaggagggtcaagggtatgagcgtcacaatgaaggtgcag 37533
>dbj|AP004267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0039H02 Length = 169162 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Plus Query: 384 aaagttctcaaggagggcgaaggatatgaacgtcccaatgagggtgcag 432 ||||||||||||||||| |||| ||||| |||| |||||| ||||||| Sbjct: 106118 aaagttctcaaggagggtcaagggtatgagcgtcacaatgaaggtgcag 106166
>dbj|AK100844.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023123G09, full insert sequence Length = 2162 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 216 gagaaggtgctcctcgcggtcaagccacagtatggatttggtgag 260 |||||||| |||||| | ||||||||||| ||||| ||||||||| Sbjct: 777 gagaaggtcctcctcactgtcaagccacaatatggctttggtgag 821
>gb|AC105767.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1126_B11, complete sequence Length = 103615 Score = 48.1 bits (24), Expect = 0.032 Identities = 50/58 (86%), Gaps = 3/58 (5%) Strand = Plus / Minus Query: 17 tggtggcatattcaagaagatattgaaggagggagataaatgggagaccccaaaggat 74 |||||||||||||||||||||| | |||||||| |||| ||||| |||||||||| Sbjct: 4591 tggtggcatattcaagaagatact---tgagggagagaaataggagaacccaaaggat 4537
>gb|AC136218.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0039A21, complete sequence Length = 139074 Score = 48.1 bits (24), Expect = 0.032 Identities = 50/58 (86%), Gaps = 3/58 (5%) Strand = Plus / Minus Query: 17 tggtggcatattcaagaagatattgaaggagggagataaatgggagaccccaaaggat 74 |||||||||||||||||||||| | |||||||| |||| ||||| |||||||||| Sbjct: 90664 tggtggcatattcaagaagatact---tgagggagagaaataggagaacccaaaggat 90610
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 48.1 bits (24), Expect = 0.032 Identities = 50/58 (86%), Gaps = 3/58 (5%) Strand = Plus / Minus Query: 17 tggtggcatattcaagaagatattgaaggagggagataaatgggagaccccaaaggat 74 |||||||||||||||||||||| | |||||||| |||| ||||| |||||||||| Sbjct: 18123409 tggtggcatattcaagaagatact---tgagggagagaaataggagaacccaaaggat 18123355
>dbj|AB015468.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K15N18 Length = 66084 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 318 attgaccttgagctggtttcatggaagactgt 349 |||||||||||| ||||||| ||||||||||| Sbjct: 13429 attgaccttgagttggtttcttggaagactgt 13398 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 390 ctcaaggagggcgaaggatatgaacgtcccaatga 424 |||||||| || ||||||||||| ||||||||||| Sbjct: 13357 ctcaaggaaggagaaggatatgagcgtcccaatga 13323 Score = 44.1 bits (22), Expect = 0.50 Identities = 34/38 (89%) Strand = Plus / Minus Query: 192 gctgttaaaaccatgaaaaaaggagagaaggtgctcct 229 ||||| ||||||||||||| ||| |||||||| ||||| Sbjct: 13641 gctgtcaaaaccatgaaaagaggggagaaggttctcct 13604
>ref|NM_187107.1| Oryza sativa (japonica cultivar-group), mRNA Length = 246 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 15 gatggtggcatattcaagaagat 37 ||||||||||||||||||||||| Sbjct: 118 gatggtggcatattcaagaagat 140
>gb|BT012788.1| Lycopersicon esculentum clone 113780F, mRNA sequence Length = 2264 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 464 agatggcacagtcttcttaaagaaggggcatgatg 498 |||||||||||||||| ||||||||| ||||||| Sbjct: 1112 agatggcacagtcttcacaaagaagggccatgatg 1146
>gb|AC162465.3| Mus musculus 6 BAC RP24-108G5 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 203546 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 463 aagatggcacagtcttcttaaag 485 ||||||||||||||||||||||| Sbjct: 126065 aagatggcacagtcttcttaaag 126087
>dbj|AP003802.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1047_A06 Length = 111673 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 15 gatggtggcatattcaagaagat 37 ||||||||||||||||||||||| Sbjct: 108364 gatggtggcatattcaagaagat 108386
>gb|AC158657.2| Mus musculus 6 BAC RP23-395C12 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 202215 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 463 aagatggcacagtcttcttaaag 485 ||||||||||||||||||||||| Sbjct: 16220 aagatggcacagtcttcttaaag 16198
>gb|AY112326.1| Zea mays CL40761_1 mRNA sequence Length = 1098 Score = 46.1 bits (23), Expect = 0.13 Identities = 38/43 (88%) Strand = Plus / Minus Query: 184 tggcgaaagctgttaaaaccatgaaaaaaggagagaaggtgct 226 |||| |||||||| |||||||||| ||| | |||||||||||| Sbjct: 486 tggccaaagctgtcaaaaccatgagaaaggcagagaaggtgct 444
>ref|NM_113429.3| Arabidopsis thaliana ROF1 (ROTAMASE FKBP 1); FK506 binding / calmodulin binding / peptidyl-prolyl cis-trans isomerase AT3G25230 (ROF1) mRNA, complete cds Length = 1974 Score = 42.1 bits (21), Expect = 2.0 Identities = 81/101 (80%) Strand = Plus / Plus Query: 111 gaggatggtactgttgtgtccaagtctgagggggttgaatttactgttaaagatggacac 170 ||||||||||||||||| || ||||| || || || || |||||||||||||| || Sbjct: 603 gaggatggtactgttgttgggaaatctgatggtgtggagttcactgttaaagatggtcat 662 Query: 171 ctctgccctgcattggcgaaagctgttaaaaccatgaaaaa 211 ||||||||||| | | || ||||| ||||| |||||||| Sbjct: 663 ttctgccctgcacttactaaggctgtgaaaactatgaaaaa 703
>ref|XM_465763.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2341 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 504 gagccatttgaatttaagactgatgaaga 532 |||||||| || ||||||||||||||||| Sbjct: 1181 gagccattcgagtttaagactgatgaaga 1209
>gb|AE006711.1| Sulfolobus solfataricus P2 section 70 of 272 of the complete genome Length = 8615 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 ggtggcatattcaagaagata 38 ||||||||||||||||||||| Sbjct: 1786 ggtggcatattcaagaagata 1806
>gb|AC116319.4| Mus musculus BAC clone RP23-265J2 from chromosome 14, complete sequence Length = 170494 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 atattcaagaagatattgaag 44 ||||||||||||||||||||| Sbjct: 83868 atattcaagaagatattgaag 83888
>emb|BX548156.1|OSJN00292 Oryza sativa genomic DNA, chromosome 4, BAC clone: P0076O17, complete sequence Length = 121130 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 468 ggcacagtcttcttaaagaag 488 ||||||||||||||||||||| Sbjct: 89136 ggcacagtcttcttaaagaag 89116
>gb|AC114288.2| Homo sapiens chromosome 5 clone CTD-2373J16, complete sequence Length = 84270 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 509 atttgaatttaagactgatgaagat 533 |||||||||||||||| |||||||| Sbjct: 1819 atttgaatttaagactaatgaagat 1795
>gb|AC114307.2| Homo sapiens chromosome 5 clone RP11-195J17, complete sequence Length = 83767 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 509 atttgaatttaagactgatgaagat 533 |||||||||||||||| |||||||| Sbjct: 78578 atttgaatttaagactaatgaagat 78554
>gb|AC104643.2| Homo sapiens chromosome 3 clone RP11-356I4, complete sequence Length = 170691 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 334 tttcatggaagactgtcacag 354 ||||||||||||||||||||| Sbjct: 64799 tttcatggaagactgtcacag 64779
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 468 ggcacagtcttcttaaagaag 488 ||||||||||||||||||||| Sbjct: 22023214 ggcacagtcttcttaaagaag 22023194
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 504 gagccatttgaatttaagactgatgaaga 532 |||||||| || ||||||||||||||||| Sbjct: 17258173 gagccattcgagtttaagactgatgaaga 17258145
>emb|AL662973.3|OSJN00175 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064D20, complete sequence Length = 99855 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 468 ggcacagtcttcttaaagaag 488 ||||||||||||||||||||| Sbjct: 95785 ggcacagtcttcttaaagaag 95765
>dbj|AP005317.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0579G08 Length = 164452 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 504 gagccatttgaatttaagactgatgaaga 532 |||||||| || ||||||||||||||||| Sbjct: 30856 gagccattcgagtttaagactgatgaaga 30828
>dbj|AP004864.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0048K16 Length = 159891 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 504 gagccatttgaatttaagactgatgaaga 532 |||||||| || ||||||||||||||||| Sbjct: 128940 gagccattcgagtttaagactgatgaaga 128912
>dbj|AK073233.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033023H01, full insert sequence Length = 2341 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 504 gagccatttgaatttaagactgatgaaga 532 |||||||| || ||||||||||||||||| Sbjct: 1181 gagccattcgagtttaagactgatgaaga 1209
>dbj|AK067142.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095E05, full insert sequence Length = 1802 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 468 ggcacagtcttcttaaagaag 488 ||||||||||||||||||||| Sbjct: 434 ggcacagtcttcttaaagaag 414
>gb|AY106502.1| Zea mays PCO063683 mRNA sequence Length = 559 Score = 42.1 bits (21), Expect = 2.0 Identities = 96/121 (79%) Strand = Plus / Plus Query: 46 agggagataaatgggagaccccaaaggatcctgatgaagtctttgtcaaatatgaggccc 105 |||| ||||| ||||||| ||| | |||||||||||||| |||| || ||||| || Sbjct: 278 agggcgataagtgggagaaccccagagatcctgatgaagttgttgttaagtatgaagcaa 337 Query: 106 ggctcgaggatggtactgttgtgtccaagtctgagggggttgaatttactgttaaagatg 165 |||| |||||||| || ||||| || || ||||| || ||||| || ||||| | ||||| Sbjct: 338 ggcttgaggatggaacagttgtatcgaaatctgatggtgttgagttcactgtgagagatg 397 Query: 166 g 166 | Sbjct: 398 g 398
>gb|U49453.1|ATU49453 Arabidopsis thaliana FK506 binding protein FKBP62 (ROF1) mRNA, complete cds Length = 1934 Score = 42.1 bits (21), Expect = 2.0 Identities = 81/101 (80%) Strand = Plus / Plus Query: 111 gaggatggtactgttgtgtccaagtctgagggggttgaatttactgttaaagatggacac 170 ||||||||||||||||| || ||||| || || || || |||||||||||||| || Sbjct: 554 gaggatggtactgttgttgggaaatctgatggtgtggagttcactgttaaagatggtcat 613 Query: 171 ctctgccctgcattggcgaaagctgttaaaaccatgaaaaa 211 ||||||||||| | | || ||||| ||||| |||||||| Sbjct: 614 ttctgccctgcacttactaaggctgtgaaaactatgaaaaa 654
>ref|XM_422845.1| PREDICTED: Gallus gallus similar to KIAA0669 gene product (LOC425043), mRNA Length = 2642 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 271 cagcagctggcgagggaggtgctgtgccacca 302 |||| ||||||| ||||| ||||||||||||| Sbjct: 287 cagctgctggcgggggagctgctgtgccacca 318
>gb|AC140364.4| Mus musculus BAC clone RP24-75K5 from chromosome 5, complete sequence Length = 234652 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 aaagctgttaaaaccatgaa 208 |||||||||||||||||||| Sbjct: 47881 aaagctgttaaaaccatgaa 47862
>gb|AE014308.1| Homo sapiens chromosome 13q34 schizophrenia region contig 1 section 5 of 11 of the complete sequence Length = 250029 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 327 gagctggtttcatggaagac 346 |||||||||||||||||||| Sbjct: 45025 gagctggtttcatggaagac 45044
>gb|AC116827.7| Mus musculus chromosome 18, clone RP24-370N5, complete sequence Length = 151007 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 ggaagactgtcacagaaata 359 |||||||||||||||||||| Sbjct: 132315 ggaagactgtcacagaaata 132334
>emb|Z14031.1|MITGMATPA G.max mitochondrial atpA Length = 6184 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 252 tttggtgagatgggtagaccagcagctg 279 ||||| |||||||| ||||||||||||| Sbjct: 154 tttggagagatggggagaccagcagctg 127
>emb|AL162495.18| Human DNA sequence from clone RP11-233O7 on chromosome 13, complete sequence Length = 74428 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 327 gagctggtttcatggaagac 346 |||||||||||||||||||| Sbjct: 6652 gagctggtttcatggaagac 6671
>emb|AL137783.12| Human DNA sequence from clone RP5-1181K21 on chromosome 6 Contains the 5' end of the gene for a novel protein, the RPS12 gene for ribosomal protein S12, a high-mobility group (nonhistone chromosomal) protein 1-like 10 (HMG1L10) pseudogene, and a CpG island, complete sequence Length = 108895 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 tcaaaataactggaaaactt 461 |||||||||||||||||||| Sbjct: 51684 tcaaaataactggaaaactt 51703
>emb|AL078634.24|HS1049G11 Human DNA sequence from clone RP5-1049G11 on chromosome 20p11.1-11.23 Contains part of the KIAA1272 gene for a protein similar to rat tulip proteins 1 and 2, the 5' part of the gene for a novel protein similar to eukaryotic translation initiation factor 4E-like 4 and part of a novel protein similar to fly CG552, complete sequence Length = 136168 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 aaagctgttaaaaccatgaaaaaa 212 ||||||||||||| |||||||||| Sbjct: 103351 aaagctgttaaaaacatgaaaaaa 103374
>emb|AL034344.24|HS118B18 Human DNA sequence from clone RP1-118B18 on chromosome 6p24.1-25.3 Contains the FOXC1 gene for forkhead box C1 gene, the 3' end of the GMDS gene for GDP-mannose 4 6-dehydratase and four CpG Islands, complete sequence Length = 104729 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 191 agctgttaaaaccatgaaaaaagg 214 ||||||||||| |||||||||||| Sbjct: 16915 agctgttaaaatcatgaaaaaagg 16892
>emb|AL024474.1|HS91J24 Human DNA sequence from clone RP1-91J24 on chromosome 6q24 Contains a pseudogene similar to single-stranded DNA-binding protein, the 5' end of the UTRN gene for utrophin (dystrophin-related protein) (DRP, DRP1, DMDL) and a putative novel gene. Contains a CpG island, complete sequence Length = 95267 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 actgttaaagatggacacct 172 |||||||||||||||||||| Sbjct: 86481 actgttaaagatggacacct 86500
>emb|Y07636.1|TAFKBP77 T.aestivum mRNA for peptidylprolyl isomerase Length = 1999 Score = 40.1 bits (20), Expect = 7.9 Identities = 47/56 (83%) Strand = Plus / Plus Query: 201 accatgaaaaaaggagagaaggtgctcctcgcggtcaagccacagtatggatttgg 256 |||||||| || || |||||||| ||||| | ||||||||||| ||||| ||||| Sbjct: 712 accatgaagaagggcgagaaggtcctcctgaccgtcaagccacaatatggttttgg 767
>emb|AL627263.6| Zebrafish DNA sequence from clone RP71-1L9 in linkage group 14 Contains part of a novel gene similar to ATP8B1 (ATPase, Class I, type 8B, member 1), part of a novel gene similar to MCF2 (MCF.2 cell line derived transforming sequence) and two CpG islands, complete sequence Length = 174521 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 76 ctgatgaagtctttgtcaaatatg 99 |||||| ||||||||||||||||| Sbjct: 9703 ctgatgcagtctttgtcaaatatg 9726
>emb|AL662785.5| Mouse DNA sequence from clone RP23-186N7 on chromosome 11, complete sequence Length = 158968 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 tgaccttgagctggtttcat 339 |||||||||||||||||||| Sbjct: 152595 tgaccttgagctggtttcat 152614
>emb|BX323579.20| Zebrafish DNA sequence from clone DKEYP-79E11 in linkage group 14, complete sequence Length = 120579 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 76 ctgatgaagtctttgtcaaatatg 99 |||||| ||||||||||||||||| Sbjct: 88715 ctgatgcagtctttgtcaaatatg 88738
>gb|AC161369.3| Mus musculus BAC clone RP23-426C11 from chromosome 3, complete sequence Length = 202655 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 283 agggaggtgctgtgccaccaaatg 306 |||||| ||||||||||||||||| Sbjct: 39833 agggagatgctgtgccaccaaatg 39856
>gb|AC124231.17| Mus musculus chromosome 18, clone RP23-17N19, complete sequence Length = 219005 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 ggaagactgtcacagaaata 359 |||||||||||||||||||| Sbjct: 8182 ggaagactgtcacagaaata 8201
>gb|AC116315.2| Homo sapiens chromosome 1 clone RP11-211J9, complete sequence Length = 154057 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 327 gagctggtttcatggaagac 346 |||||||||||||||||||| Sbjct: 22334 gagctggtttcatggaagac 22353
>gb|DP000059.1| Carollia perspicillata target 117 genomic scaffold Length = 359132 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 ttaaaaccatgaaaaaagga 215 |||||||||||||||||||| Sbjct: 207350 ttaaaaccatgaaaaaagga 207369
>gb|AC115100.3| Homo sapiens chromosome 18, clone RP11-237L15, complete sequence Length = 169152 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 510 tttgaatttaagactgatgaagat 533 |||||||||||||||||| ||||| Sbjct: 22563 tttgaatttaagactgataaagat 22586
>gb|AC104458.2| Homo sapiens chromosome 1 clone RP5-1102E8, complete sequence Length = 135063 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 327 gagctggtttcatggaagac 346 |||||||||||||||||||| Sbjct: 97127 gagctggtttcatggaagac 97146
>gb|AC091143.6| Homo sapiens chromosome 18, clone CTD-3056C12, complete sequence Length = 104854 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 510 tttgaatttaagactgatgaagat 533 |||||||||||||||||| ||||| Sbjct: 61151 tttgaatttaagactgataaagat 61174
>gb|AC015604.5|AC015604 Homo sapiens, clone RP11-45D18, complete sequence Length = 172914 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 327 gagctggtttcatggaagac 346 |||||||||||||||||||| Sbjct: 44457 gagctggtttcatggaagac 44476
>emb|BX890619.6| Zebrafish DNA sequence from clone CH211-288M1, complete sequence Length = 141754 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 76 ctgatgaagtctttgtcaaatatg 99 |||||| ||||||||||||||||| Sbjct: 23858 ctgatgcagtctttgtcaaatatg 23881
>gb|AC127285.4| Mus musculus BAC clone RP23-336P20 from chromosome 8, complete sequence Length = 232127 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 gggacatttgcaaagatggt 20 |||||||||||||||||||| Sbjct: 74185 gggacatttgcaaagatggt 74204
>gb|AC008854.3|AC008854 Homo sapiens chromosome 5 clone CTD-2177J2, complete sequence Length = 129538 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 aaatgggagaccccaaagga 73 |||||||||||||||||||| Sbjct: 31725 aaatgggagaccccaaagga 31744
>dbj|AP005931.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0545E05 Length = 163229 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 agaagatcctcaaaaaagtt 389 |||||||||||||||||||| Sbjct: 141244 agaagatcctcaaaaaagtt 141225
>dbj|AB128918.1| Escherichia coli flmA54, fljA54 genes for flagellin, repressor for fliC, hypothetical protein, complete cds, strain: E223-69 Length = 12979 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 510 tttgaatttaagactgatga 529 |||||||||||||||||||| Sbjct: 3436 tttgaatttaagactgatga 3455
>gb|AC122531.4| Mus musculus BAC clone RP24-536C4 from 3, complete sequence Length = 188887 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 283 agggaggtgctgtgccaccaaatg 306 |||||| ||||||||||||||||| Sbjct: 163047 agggagatgctgtgccaccaaatg 163070
>emb|BX510927.6| Zebrafish DNA sequence from clone DKEYP-106A1 in linkage group 20, complete sequence Length = 48736 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 ttaaaaccatgaaaaaagga 215 |||||||||||||||||||| Sbjct: 14298 ttaaaaccatgaaaaaagga 14317
>emb|AL928707.5| Zebrafish DNA sequence from clone CH211-207M2 in linkage group 21, complete sequence Length = 206304 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 445 aaataactggaaaacttcaa 464 |||||||||||||||||||| Sbjct: 88850 aaataactggaaaacttcaa 88831
>emb|AL132718.5|CNS01DTG Human chromosome 14 DNA sequence BAC R-626P14 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 183009 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 ctgatgaagtctttgtcaaa 95 |||||||||||||||||||| Sbjct: 149877 ctgatgaagtctttgtcaaa 149858
>emb|AL110292.4|CNS018P1 Human chromosome 14 DNA sequence BAC R-384J4 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 177427 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 ctgatgaagtctttgtcaaa 95 |||||||||||||||||||| Sbjct: 21885 ctgatgaagtctttgtcaaa 21866
>dbj|AP000428.3| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1303B4 Length = 173872 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 327 gagctggtttcatggaagac 346 |||||||||||||||||||| Sbjct: 72240 gagctggtttcatggaagac 72221
>emb|AL590996.12| Mouse DNA sequence from clone RP23-328K2 on chromosome 11, complete sequence Length = 139242 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 344 gactgtcacagaaataggggatga 367 |||||||| ||||||||||||||| Sbjct: 89197 gactgtcagagaaataggggatga 89220
>gb|M57947.1|CHPTPIA P.troglodytes triose-phosphate isomerase (TPI) pseudogene A Length = 3940 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 327 gagctggtttcatggaagac 346 |||||||||||||||||||| Sbjct: 2919 gagctggtttcatggaagac 2938 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,065,709 Number of Sequences: 3902068 Number of extensions: 6065709 Number of successful extensions: 161417 Number of sequences better than 10.0: 82 Number of HSP's better than 10.0 without gapping: 81 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 160955 Number of HSP's gapped (non-prelim): 455 length of query: 579 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 556 effective length of database: 17,143,297,704 effective search space: 9531673523424 effective search space used: 9531673523424 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)