Clone Information

BLAST Search Result

Clone Name	bags4k09
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RL7A_ORYSA (P35685) 60S ribosomal protein L7a	254	7e-68
2	RL7A_ARATH (P49692) 60S ribosomal protein L7a	246	2e-65
3	RL7A_DROME (P46223) 60S ribosomal protein L7a	170	2e-42
4	RL7A_RAT (P62425) 60S ribosomal protein L7a	160	1e-39
5	RL7A_MOUSE (P12970) 60S ribosomal protein L7a (Surfeit locus pro...	160	1e-39
6	RL7A_HUMAN (P62424) 60S ribosomal protein L7a (Surfeit locus pro...	160	1e-39
7	RL7A_ICTPU (Q90YW2) 60S ribosomal protein L7a	159	4e-39
8	RL7A_FUGRU (O57592) 60S ribosomal protein L7a (Surfeit locus pro...	159	4e-39
9	RL7A_ANOGA (O76732) 60S ribosomal protein L7a	159	5e-39
10	RL7A_CHICK (P32429) 60S ribosomal protein L7a	157	1e-38
11	RL8_SCHPO (O13672) 60S ribosomal protein L8 (L7A) (L4)	157	2e-38
12	RL8A_YEAST (P17076) 60S ribosomal protein L8-A (L7A-2) (L4-2) (Y...	155	7e-38
13	RL8B_YEAST (P29453) 60S ribosomal protein L8-B (L7A-1) (L4-1) (Y...	154	9e-38
14	RL7A_CAEEL (Q966C6) 60S ribosomal protein L7a	135	8e-32
15	RL7A_PIG (Q29375) 60S ribosomal protein L7a (Fragment)	115	5e-26
16	RL7A_THEVO (Q97BK8) 50S ribosomal protein L7Ae	61	2e-09
17	RL7A_THEAC (Q9HJ56) 50S ribosomal protein L7Ae	60	2e-09
18	RL7A_ARCFU (O29494) 50S ribosomal protein L7Ae	60	2e-09
19	RL7A_PYRHO (P62009) 50S ribosomal protein L7Ae	60	3e-09
20	RL7A_PYRFU (Q8U160) 50S ribosomal protein L7Ae	60	3e-09
21	RL7A_PYRAB (P62008) 50S ribosomal protein L7Ae	60	3e-09
22	RL7A_PICTO (Q6KZI7) 50S ribosomal protein L7Ae	60	4e-09
23	RL7A_AERPE (Q9YAX7) 50S ribosomal protein L7Ae	59	5e-09
24	RL7A_PYRKO (Q5JGR3) 50S ribosomal protein L7Ae	58	2e-08
25	RL7A_PYRAE (Q8ZTA5) 50S ribosomal protein L7Ae	57	2e-08
26	RL7A_SULAC (Q4J8P1) 50S ribosomal protein L7Ae	56	4e-08
27	RL7A_NANEQ (P62427) 50S ribosomal protein L7Ae	55	8e-08
28	RL7A_SULTO (Q971C9) 50S ribosomal protein L7Ae	55	1e-07
29	RL7A_SULSO (P55858) 50S ribosomal protein L7Ae	55	1e-07
30	RL7A_METTH (O26355) 50S ribosomal protein L7Ae	54	2e-07
31	RL7A_METJA (P54066) 50S ribosomal protein L7Ae	54	2e-07
32	NHPX_RAT (P55770) NHP2-like protein 1 (High mobility group-like ...	53	5e-07
33	NHPX_MOUSE (Q9D0T1) NHP2-like protein 1 (High mobility group-lik...	53	5e-07
34	NHPX_HUMAN (P55769) NHP2-like protein 1 (High mobility group-lik...	53	5e-07
35	RL7A_METKA (Q8TV03) 50S ribosomal protein L7Ae	52	6e-07
36	NHPX_DROME (Q9U3Z7) NHP2-like protein (Hoi-polloi protein)	52	6e-07
37	NHPX_CAEEL (Q21568) NHP2/L7aE family protein YEL026W homolog	50	2e-06
38	NHP2_YEAST (P32495) H/ACA ribonucleoprotein complex subunit 2 (H...	49	5e-06
39	RL7A_METAC (Q8TQL9) 50S ribosomal protein L7Ae	47	3e-05
40	NOLA2_MOUSE (Q9CRB2) H/ACA ribonucleoprotein complex subunit 2 (...	47	4e-05
41	NHP2_SCHPO (Q9P7H0) H/ACA ribonucleoprotein complex subunit 2 (H...	47	4e-05
42	NOLA2_BRABE (Q8I7X7) H/ACA ribonucleoprotein complex subunit 2-l...	46	5e-05
43	NOLA2_DROYA (Q6XIP0) H/ACA ribonucleoprotein complex subunit 2-l...	46	6e-05
44	RL7A_METMA (Q8PU74) 50S ribosomal protein L7Ae	46	6e-05
45	NOLA2_CAEEL (Q9XXD4) Putative H/ACA ribonucleoprotein complex su...	45	8e-05
46	NOLA2_DROME (Q9V3U2) H/ACA ribonucleoprotein complex subunit 2-l...	45	1e-04
47	NOLA2_XENTR (Q6P8C4) H/ACA ribonucleoprotein complex subunit 2-l...	45	1e-04
48	NOLA2_XENLA (Q6NTV9) H/ACA ribonucleoprotein complex subunit 2-l...	45	1e-04
49	SNU13_YEAST (P39990) 13 kDa ribonucleoprotein-associated protein	44	2e-04
50	NOLA2_BOVIN (Q5E950) H/ACA ribonucleoprotein complex subunit 2 (...	44	2e-04
51	NOLA2_ARATH (Q9LEY9) H/ACA ribonucleoprotein complex subunit 2-l...	44	2e-04
52	NOLA2_PONPY (Q5RC65) H/ACA ribonucleoprotein complex subunit 2 (...	43	4e-04
53	NOLA2_HUMAN (Q9NX24) H/ACA ribonucleoprotein complex subunit 2 (...	43	5e-04
54	NOLA2_CAEBR (Q60YI3) Putative H/ACA ribonucleoprotein complex su...	42	7e-04
55	NOLA2_BRARE (Q6PBV6) H/ACA ribonucleoprotein complex subunit 2-l...	42	7e-04
56	RS12A_ARATH (Q9S9P1) 40S ribosomal protein S12-1	34	0.18
57	PARP1_CHICK (P26446) Poly [ADP-ribose] polymerase 1 (EC 2.4.2.30...	33	0.40
58	PARP1_RAT (P27008) Poly [ADP-ribose] polymerase 1 (EC 2.4.2.30) ...	32	0.90
59	DRL26_ARATH (Q84WD3) Probable disease resistance protein At4g19060	32	1.2
60	RS12_HORVU (Q9XHS0) 40S ribosomal protein S12	31	1.5
61	RS12C_ARATH (Q9SKZ3) 40S ribosomal protein S12-3	31	2.0
62	CFAI_HUMAN (P05156) Complement factor I precursor (EC 3.4.21.45)...	30	3.4
63	LCN2_LACLA (P37609) Lacticin 481/lactococcin biosynthesis protei...	29	5.8
64	Y640_HAEDU (Q7VNB5) UPF0341 protein HD_0640	29	5.8
65	PARP1_CRIGR (Q9R152) Poly [ADP-ribose] polymerase 1 (EC 2.4.2.30...	29	5.8
66	PARP1_HUMAN (P09874) Poly [ADP-ribose] polymerase 1 (EC 2.4.2.30...	29	7.6
67	PARP1_MOUSE (P11103) Poly [ADP-ribose] polymerase 1 (EC 2.4.2.30...	29	7.6
68	LRAT_RAT (Q9JI61) Lecithin retinol acyltransferase (EC 2.3.1.135...	28	9.9
69	PETD_EMIHU (Q4G3F7) Cytochrome b6-f complex subunit 4 (17 kDa po...	28	9.9
70	MFD_HAEIN (P45128) Transcription-repair coupling factor (EC 3.6....	28	9.9
71	CFAI_MOUSE (Q61129) Complement factor I precursor (EC 3.4.21.45)...	28	9.9

>RL7A_ORYSA (P35685) 60S ribosomal protein L7a|
          Length = 258

 Score =  254 bits (650), Expect = 7e-68
 Identities = 126/129 (97%), Positives = 129/129 (100%)
 Frame = +2

Query: 2   KYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHK 181
           KYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGK+RLGSIVHK
Sbjct: 129 KYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKARLGSIVHK 188

Query: 182 KTASVLCLTTVKNEDKLEFSKILEAIKANFNDKFDEVRKKWGGGVMGSKSQAKTKARERL 361
           KTASVLCLTTVKNEDKLEFSKILEAIKANFNDKFDEVRKKWGGGVMGSKSQAKTKARE+L
Sbjct: 189 KTASVLCLTTVKNEDKLEFSKILEAIKANFNDKFDEVRKKWGGGVMGSKSQAKTKAREKL 248

Query: 362 IAKEAAQRM 388
           +AKEAAQRM
Sbjct: 249 LAKEAAQRM 257

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>RL7A_ARATH (P49692) 60S ribosomal protein L7a|
          Length = 257

 Score =  246 bits (629), Expect = 2e-65
 Identities = 119/130 (91%), Positives = 128/130 (98%)
 Frame = +2

Query: 2   KYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHK 181
           KYGLNHVTYLIEQ+KAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLG++VH+
Sbjct: 128 KYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGAVVHQ 187

Query: 182 KTASVLCLTTVKNEDKLEFSKILEAIKANFNDKFDEVRKKWGGGVMGSKSQAKTKARERL 361
           KTAS LCLTTVKNEDKLEFSKILEAIKANFNDK++E RKKWGGG+MGSKSQAKTKA+ER+
Sbjct: 188 KTASCLCLTTVKNEDKLEFSKILEAIKANFNDKYEEYRKKWGGGIMGSKSQAKTKAKERV 247

Query: 362 IAKEAAQRMN 391
           IAKEAAQRMN
Sbjct: 248 IAKEAAQRMN 257

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>RL7A_DROME (P46223) 60S ribosomal protein L7a|
          Length = 271

 Score =  170 bits (431), Expect = 2e-42
 Identities = 81/126 (64%), Positives = 100/126 (79%)
 Frame = +2

Query: 8   GLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKT 187
           G N VT LIEQ KAQLVVIAHDVDP+ELV++LPALCRKM VPYCIVKGK+RLG +V +KT
Sbjct: 144 GTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGRLVRRKT 203

Query: 188 ASVLCLTTVKNEDKLEFSKILEAIKANFNDKFDEVRKKWGGGVMGSKSQAKTKARERLIA 367
            + L LTTV N DK  F K+LEA+K NFN++ +E+R+ WGGG++GSKS A+    ER  A
Sbjct: 204 CTTLALTTVDNNDKANFGKVLEAVKTNFNERHEEIRRHWGGGILGSKSLARISKLERAKA 263

Query: 368 KEAAQR 385
           +E AQ+
Sbjct: 264 RELAQK 269

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>RL7A_RAT (P62425) 60S ribosomal protein L7a|
          Length = 265

 Score =  160 bits (406), Expect = 1e-39
 Identities = 75/127 (59%), Positives = 99/127 (77%)
 Frame = +2

Query: 8   GLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKT 187
           G+N VT L+E  KAQLVVIAHDVDPIELVV+LPALCRKM VPYCI+KGK+RLG +VH+KT
Sbjct: 138 GVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRKT 197

Query: 188 ASVLCLTTVKNEDKLEFSKILEAIKANFNDKFDEVRKKWGGGVMGSKSQAKTKARERLIA 367
            + +  T V +EDK   +K++EAI+ N+ND++DE+R+ WGG V+G KS A+    E+  A
Sbjct: 198 CTTVAFTQVNSEDKGALAKLVEAIRTNYNDRYDEIRRHWGGNVLGPKSVARIAKLEKAKA 257

Query: 368 KEAAQRM 388
           KE A ++
Sbjct: 258 KELATKL 264

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>RL7A_MOUSE (P12970) 60S ribosomal protein L7a (Surfeit locus protein 3)|
          Length = 265

 Score =  160 bits (406), Expect = 1e-39
 Identities = 75/127 (59%), Positives = 99/127 (77%)
 Frame = +2

Query: 8   GLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKT 187
           G+N VT L+E  KAQLVVIAHDVDPIELVV+LPALCRKM VPYCI+KGK+RLG +VH+KT
Sbjct: 138 GVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGHLVHRKT 197

Query: 188 ASVLCLTTVKNEDKLEFSKILEAIKANFNDKFDEVRKKWGGGVMGSKSQAKTKARERLIA 367
            + +  T V +EDK   +K++EAI+ N+ND++DE+R+ WGG V+G KS A+    E+  A
Sbjct: 198 CTTVAFTQVNSEDKGALAKLVEAIRTNYNDRYDEIRRHWGGNVLGPKSVARIAKLEKAKA 257

Query: 368 KEAAQRM 388
           KE A ++
Sbjct: 258 KELATKL 264

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>RL7A_HUMAN (P62424) 60S ribosomal protein L7a (Surfeit locus protein 3) (PLA-X|
           polypeptide)
          Length = 265

 Score =  160 bits (406), Expect = 1e-39
 Identities = 75/127 (59%), Positives = 99/127 (77%)
 Frame = +2

Query: 8   GLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKT 187
           G+N VT L+E  KAQLVVIAHDVDPIELVV+LPALCRKM VPYCI+KGK+RLG +VH+KT
Sbjct: 138 GVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRKT 197

Query: 188 ASVLCLTTVKNEDKLEFSKILEAIKANFNDKFDEVRKKWGGGVMGSKSQAKTKARERLIA 367
            + +  T V +EDK   +K++EAI+ N+ND++DE+R+ WGG V+G KS A+    E+  A
Sbjct: 198 CTTVAFTQVNSEDKGALAKLVEAIRTNYNDRYDEIRRHWGGNVLGPKSVARIAKLEKAKA 257

Query: 368 KEAAQRM 388
           KE A ++
Sbjct: 258 KELATKL 264

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>RL7A_ICTPU (Q90YW2) 60S ribosomal protein L7a|
          Length = 265

 Score =  159 bits (402), Expect = 4e-39
 Identities = 73/127 (57%), Positives = 97/127 (76%)
 Frame = +2

Query: 8   GLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKT 187
           G+N VT L+E  KAQLVVIAHDVDPIELV++LPALCRKM VPYCIVKGK+RLG +VH+KT
Sbjct: 138 GVNTVTSLVESKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKARLGRLVHRKT 197

Query: 188 ASVLCLTTVKNEDKLEFSKILEAIKANFNDKFDEVRKKWGGGVMGSKSQAKTKARERLIA 367
            + +C T    ED+   +K++EAIK N+ND+++E+R+ WGG +MG KS A+    E+   
Sbjct: 198 CTSVCFTQTNPEDRAALAKLVEAIKTNYNDRYEEIRRHWGGNIMGPKSTARIAKLEKAKG 257

Query: 368 KEAAQRM 388
           KE A ++
Sbjct: 258 KELATKL 264

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>RL7A_FUGRU (O57592) 60S ribosomal protein L7a (Surfeit locus protein 3)|
          Length = 265

 Score =  159 bits (402), Expect = 4e-39
 Identities = 73/127 (57%), Positives = 98/127 (77%)
 Frame = +2

Query: 8   GLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKT 187
           G+N +T L+E  KAQLVVIAHDVDPIELV++LPALCRKM VPYCIVKGK+RLG +VH+KT
Sbjct: 138 GVNTITSLVENKKAQLVVIAHDVDPIELVIFLPALCRKMGVPYCIVKGKARLGRLVHRKT 197

Query: 188 ASVLCLTTVKNEDKLEFSKILEAIKANFNDKFDEVRKKWGGGVMGSKSQAKTKARERLIA 367
            + +  T    EDK   +K++EAIK N+ND+++E+R+ WGGG++G KS A+    E+  A
Sbjct: 198 CTSVAFTQTNPEDKGALAKLVEAIKTNYNDRYEEIRRHWGGGILGPKSTARINKLEKAKA 257

Query: 368 KEAAQRM 388
           KE A ++
Sbjct: 258 KELATKL 264

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>RL7A_ANOGA (O76732) 60S ribosomal protein L7a|
          Length = 271

 Score =  159 bits (401), Expect = 5e-39
 Identities = 71/128 (55%), Positives = 99/128 (77%)
 Frame = +2

Query: 2   KYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHK 181
           + G+N V  ++EQ KAQLV+IAHDVDPIELVV+LPALCRKM VPYCI+KGK+RLG++V++
Sbjct: 143 RQGINSVVKMVEQKKAQLVIIAHDVDPIELVVYLPALCRKMGVPYCIIKGKARLGTLVYR 202

Query: 182 KTASVLCLTTVKNEDKLEFSKILEAIKANFNDKFDEVRKKWGGGVMGSKSQAKTKARERL 361
           KT + + LT  +N DK   +K++E IK NFND+FD++R+ WGGG++G KS A+    E+ 
Sbjct: 203 KTCTCVALTQFENADKPNLAKLVETIKTNFNDRFDDIRRHWGGGLLGPKSMARLAKLEKA 262

Query: 362 IAKEAAQR 385
             +E  Q+
Sbjct: 263 KKREMLQK 270

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>RL7A_CHICK (P32429) 60S ribosomal protein L7a|
          Length = 265

 Score =  157 bits (398), Expect = 1e-38
 Identities = 74/127 (58%), Positives = 97/127 (76%)
 Frame = +2

Query: 8   GLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKT 187
           G+N VT L+E  KAQLVVIAHDVDPIELVV+LPALCRKM VPYCI+K K+RLG +VH+KT
Sbjct: 138 GVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKSKARLGRLVHRKT 197

Query: 188 ASVLCLTTVKNEDKLEFSKILEAIKANFNDKFDEVRKKWGGGVMGSKSQAKTKARERLIA 367
            + +  T V  EDK   +K++EA+K N+ND++DE+R+ WGG V+G KS A+    E+  A
Sbjct: 198 CTCVAFTQVNPEDKGALAKLVEAVKTNYNDRYDEIRRHWGGNVLGPKSVARIAKLEKAKA 257

Query: 368 KEAAQRM 388
           KE A ++
Sbjct: 258 KELATKL 264

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>RL8_SCHPO (O13672) 60S ribosomal protein L8 (L7A) (L4)|
          Length = 258

 Score =  157 bits (396), Expect = 2e-38
 Identities = 75/122 (61%), Positives = 96/122 (78%)
 Frame = +2

Query: 2   KYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHK 181
           KYGLNHV  LIE  KA+LV+IA DVDPIELVV+LPALC+KM VPY IVK K+RLG+++H+
Sbjct: 132 KYGLNHVVALIEAKKAKLVLIASDVDPIELVVFLPALCKKMGVPYAIVKNKARLGTVIHQ 191

Query: 182 KTASVLCLTTVKNEDKLEFSKILEAIKANFNDKFDEVRKKWGGGVMGSKSQAKTKARERL 361
           KTA+VL +T V+ EDK E + I+ A+ ANF+ K+DE R+KWGGG+MG K+QA    R + 
Sbjct: 192 KTAAVLAVTEVREEDKNELASIVSAVDANFSAKYDESRRKWGGGIMGGKTQALLAKRAKA 251

Query: 362 IA 367
            A
Sbjct: 252 AA 253

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>RL8A_YEAST (P17076) 60S ribosomal protein L8-A (L7A-2) (L4-2) (YL5) (RP6)|
           (Maintenance of killer protein 7)
          Length = 255

 Score =  155 bits (391), Expect = 7e-38
 Identities = 73/119 (61%), Positives = 97/119 (81%)
 Frame = +2

Query: 2   KYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHK 181
           KYGLNHV  LIE  KA+LV+IA+DVDPIELVV+LPALC+KM VPY IVKGK+RLG++V++
Sbjct: 132 KYGLNHVVALIENKKAKLVLIANDVDPIELVVFLPALCKKMGVPYAIVKGKARLGTLVNQ 191

Query: 182 KTASVLCLTTVKNEDKLEFSKILEAIKANFNDKFDEVRKKWGGGVMGSKSQAKTKARER 358
           KT++V  LT V+ ED+   +K++  I ANF DK+DEV+K WGGG++G+K+QAK   R +
Sbjct: 192 KTSAVAALTEVRAEDEAALAKLVSTIDANFADKYDEVKKHWGGGILGNKAQAKMDKRAK 250

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>RL8B_YEAST (P29453) 60S ribosomal protein L8-B (L7A-1) (L4-1) (YL5) (RP6)|
          Length = 255

 Score =  154 bits (390), Expect = 9e-38
 Identities = 72/119 (60%), Positives = 97/119 (81%)
 Frame = +2

Query: 2   KYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHK 181
           KYGLNHV  LIE  KA+LV+IA+DVDPIELVV+LPALC+KM VPY I+KGK+RLG++V++
Sbjct: 132 KYGLNHVVSLIENKKAKLVLIANDVDPIELVVFLPALCKKMGVPYAIIKGKARLGTLVNQ 191

Query: 182 KTASVLCLTTVKNEDKLEFSKILEAIKANFNDKFDEVRKKWGGGVMGSKSQAKTKARER 358
           KT++V  LT V+ ED+   +K++  I ANF DK+DEV+K WGGG++G+K+QAK   R +
Sbjct: 192 KTSAVAALTEVRAEDEAALAKLVSTIDANFADKYDEVKKHWGGGILGNKAQAKMDKRAK 250

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>RL7A_CAEEL (Q966C6) 60S ribosomal protein L7a|
          Length = 264

 Score =  135 bits (339), Expect = 8e-32
 Identities = 61/124 (49%), Positives = 91/124 (73%)
 Frame = +2

Query: 2   KYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHK 181
           ++G+N +T L+E  +AQLV+IAHDV+P+E+V+ LPALCRK  VPY I+KGK+ LG++V +
Sbjct: 137 RHGVNTITRLVETRRAQLVLIAHDVNPLEIVLHLPALCRKYNVPYAIIKGKASLGTVVRR 196

Query: 182 KTASVLCLTTVKNEDKLEFSKILEAIKANFNDKFDEVRKKWGGGVMGSKSQAKTKARERL 361
           KT + + L  V  EDK   +K++E +  NF+++ +E+RK WGGGVM +KS AK    ER 
Sbjct: 197 KTTAAVALVDVNPEDKSALNKLVETVNNNFSERHEEIRKHWGGGVMSAKSDAKKLKIERA 256

Query: 362 IAKE 373
            A++
Sbjct: 257 RARD 260

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>RL7A_PIG (Q29375) 60S ribosomal protein L7a (Fragment)|
          Length = 132

 Score =  115 bits (289), Expect = 5e-26
 Identities = 55/83 (66%), Positives = 68/83 (81%)
 Frame = +2

Query: 8   GLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKT 187
           G+N VT L+E  KAQLVVIAHDVDPIELVV+LPALCRKM VPYCI+KGK+RLG +VH+KT
Sbjct: 50  GVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRKT 109

Query: 188 ASVLCLTTVKNEDKLEFSKILEA 256
            + +  T V +EDK   +K++EA
Sbjct: 110 CTTVAFTQVNSEDKGALAKLVEA 132

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>RL7A_THEVO (Q97BK8) 50S ribosomal protein L7Ae|
          Length = 121

 Score = 60.8 bits (146), Expect = 2e-09
 Identities = 38/88 (43%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
 Frame = +2

Query: 2   KYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVH- 178
           K G N V   IE+ +++LVVIA DV+P E+V +LP+LC   +VPY  VK K+ LGS V  
Sbjct: 32  KKGTNEVIKSIERGESKLVVIAEDVNPPEVVYYLPSLCEDKKVPYVYVKKKADLGSKVGI 91

Query: 179 KKTASVLCLTTVKNEDKLEFSKILEAIK 262
              ASV  +   KNE+   +  I+ A++
Sbjct: 92  ASAASVSIVDYGKNEEL--YKSIVSAVE 117

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>RL7A_THEAC (Q9HJ56) 50S ribosomal protein L7Ae|
          Length = 121

 Score = 60.5 bits (145), Expect = 2e-09
 Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
 Frame = +2

Query: 2   KYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVH- 178
           K G N V   IE+ +++LVVIA DV+P E+V +LP+LC   +VPY  VK K+ LGS V  
Sbjct: 32  KKGTNEVIKSIERGESKLVVIAEDVNPPEVVYYLPSLCEDKKVPYVYVKKKADLGSKVGI 91

Query: 179 KKTASVLCLTTVKNED 226
              ASV  +   KNE+
Sbjct: 92  ASAASVSIVDYGKNEE 107

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>RL7A_ARCFU (O29494) 50S ribosomal protein L7Ae|
          Length = 119

 Score = 60.5 bits (145), Expect = 2e-09
 Identities = 34/87 (39%), Positives = 45/87 (51%)
 Frame = +2

Query: 2   KYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHK 181
           K G N  T  +E+  A+LV IA DVDP E+V  LP LC +  VPY  VK K+ LG  V  
Sbjct: 29  KKGTNETTKAVERGLAKLVYIAEDVDPPEIVAHLPLLCEEKNVPYIYVKSKNDLGRAVGI 88

Query: 182 KTASVLCLTTVKNEDKLEFSKILEAIK 262
           +          + E + E   ++E IK
Sbjct: 89  EVPCASAAIINEGELRKELGSLVEKIK 115

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>RL7A_PYRHO (P62009) 50S ribosomal protein L7Ae|
          Length = 123

 Score = 60.1 bits (144), Expect = 3e-09
 Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
 Frame = +2

Query: 8   GLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSI--VHK 181
           G N  T  +E+ +A+LV+IA DVDP E+V  LP LC + E+PY  V  K  LG+   +  
Sbjct: 35  GTNETTKAVERGQAKLVIIAEDVDPEEIVAHLPPLCEEKEIPYIYVPSKKELGAAAGIEV 94

Query: 182 KTASVLCLTTVKNEDKLE 235
             ASV  +   K  D +E
Sbjct: 95  AAASVAIIEPGKARDLVE 112

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>RL7A_PYRFU (Q8U160) 50S ribosomal protein L7Ae|
          Length = 123

 Score = 60.1 bits (144), Expect = 3e-09
 Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
 Frame = +2

Query: 8   GLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSI--VHK 181
           G N  T  +E+ +A+LV+IA DVDP E+V  LP LC + E+PY  V  K  LG+   +  
Sbjct: 35  GTNETTKAVERGQAKLVIIAEDVDPEEIVAHLPPLCEEKEIPYIYVPSKKELGAAAGIEV 94

Query: 182 KTASVLCLTTVKNEDKLE 235
             ASV  +   K  D +E
Sbjct: 95  AAASVAIIEPGKARDLVE 112

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>RL7A_PYRAB (P62008) 50S ribosomal protein L7Ae|
          Length = 123

 Score = 60.1 bits (144), Expect = 3e-09
 Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
 Frame = +2

Query: 8   GLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSI--VHK 181
           G N  T  +E+ +A+LV+IA DVDP E+V  LP LC + E+PY  V  K  LG+   +  
Sbjct: 35  GTNETTKAVERGQAKLVIIAEDVDPEEIVAHLPPLCEEKEIPYIYVPSKKELGAAAGIEV 94

Query: 182 KTASVLCLTTVKNEDKLE 235
             ASV  +   K  D +E
Sbjct: 95  AAASVAIIEPGKARDLVE 112

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>RL7A_PICTO (Q6KZI7) 50S ribosomal protein L7Ae|
          Length = 127

 Score = 59.7 bits (143), Expect = 4e-09
 Identities = 34/74 (45%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
 Frame = +2

Query: 8   GLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLG-SIVHKK 184
           G N V   IE+ +++LVVIA DV P E+V +LP LC + +VPY  VK KS LG  +    
Sbjct: 33  GTNEVVKSIERGESKLVVIAEDVSPAEVVYYLPTLCEERKVPYVYVKKKSDLGLKVGIAS 92

Query: 185 TASVLCLTTVKNED 226
            ASV  +   KN+D
Sbjct: 93  AASVSIVDYGKNDD 106

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>RL7A_AERPE (Q9YAX7) 50S ribosomal protein L7Ae|
          Length = 127

 Score = 59.3 bits (142), Expect = 5e-09
 Identities = 32/87 (36%), Positives = 47/87 (54%)
 Frame = +2

Query: 2   KYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHK 181
           K G N  T  +E+  A+LVVIA DVDP E+V+ LP LC + ++PY  V  K RLG     
Sbjct: 33  KKGTNETTKAVERGLAKLVVIAEDVDPPEIVMHLPLLCDEKKIPYVYVPSKKRLGEAAGI 92

Query: 182 KTASVLCLTTVKNEDKLEFSKILEAIK 262
           + A+         + +    +I+E +K
Sbjct: 93  EVAAASVAIIEPGDAETLVREIVEKVK 119

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>RL7A_PYRKO (Q5JGR3) 50S ribosomal protein L7Ae|
          Length = 123

 Score = 57.8 bits (138), Expect = 2e-08
 Identities = 26/54 (48%), Positives = 35/54 (64%)
 Frame = +2

Query: 8   GLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGS 169
           G N  T  +E+ +A+LV+IA DVDP E+V  LP LC + E+PY  V  K  LG+
Sbjct: 35  GTNETTKAVERGQAKLVIIAEDVDPEEIVAHLPPLCEEKEIPYVYVPSKKELGA 88

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>RL7A_PYRAE (Q8ZTA5) 50S ribosomal protein L7Ae|
          Length = 151

 Score = 57.4 bits (137), Expect = 2e-08
 Identities = 37/102 (36%), Positives = 52/102 (50%)
 Frame = +2

Query: 2   KYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHK 181
           K G N  T  +E+  A+LV+IA DVDP E+V  LP LC + +VPY  V  K +LG     
Sbjct: 48  KKGTNETTKAVERGLAKLVLIAEDVDPPEVVAHLPLLCEEKKVPYVYVPSKEKLGKAAGI 107

Query: 182 KTASVLCLTTVKNEDKLEFSKILEAIKANFNDKFDEVRKKWG 307
             ++   +     +   E    LEA+ +    K +EVR K G
Sbjct: 108 NVSAAAAVVIEPGQAAGE----LEALVS----KINEVRAKHG 141

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>RL7A_SULAC (Q4J8P1) 50S ribosomal protein L7Ae|
          Length = 126

 Score = 56.2 bits (134), Expect = 4e-08
 Identities = 27/55 (49%), Positives = 35/55 (63%)
 Frame = +2

Query: 2   KYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLG 166
           K G N  T  +E+S+A+LVVIA DV P E+V  LP LC + ++PY  V  K  LG
Sbjct: 33  KKGTNETTKAVERSQAKLVVIAEDVQPEEIVAHLPLLCEEKKIPYVYVPSKKSLG 87

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>RL7A_NANEQ (P62427) 50S ribosomal protein L7Ae|
          Length = 125

 Score = 55.5 bits (132), Expect = 8e-08
 Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
 Frame = +2

Query: 8   GLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSI--VHK 181
           G N  T  +E+ +A+LV+IA +V+P E+V+ LPALC +  VPY  V  K  LG    ++ 
Sbjct: 36  GTNETTKAVERGQAKLVIIAENVNPPEIVMHLPALCEEKGVPYVYVPSKEELGKAAGINV 95

Query: 182 KTASVLCLTTVKNEDKLE 235
             AS   +   + +D LE
Sbjct: 96  SAASAAIIDAGEAKDLLE 113

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>RL7A_SULTO (Q971C9) 50S ribosomal protein L7Ae|
          Length = 126

 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 30/87 (34%), Positives = 45/87 (51%)
 Frame = +2

Query: 2   KYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHK 181
           K G N  T  +E+ +A+LVVIA DV P E+V  LP LC + ++PY  V  K  LG     
Sbjct: 33  KKGTNETTKAVERGQAKLVVIATDVQPEEIVAHLPLLCEEKKIPYVYVPSKKALGEACGL 92

Query: 182 KTASVLCLTTVKNEDKLEFSKILEAIK 262
           + A+         E K    +I++ ++
Sbjct: 93  QVAAASAAIIDPGEAKDLLDEIVKRVE 119

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>RL7A_SULSO (P55858) 50S ribosomal protein L7Ae|
          Length = 127

 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 29/86 (33%), Positives = 44/86 (51%)
 Frame = +2

Query: 2   KYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHK 181
           K G N  T  +E+ +A+LV+IA DV P E+V  LP LC + ++PY  V  K  LG     
Sbjct: 33  KKGTNETTKAVERGQAKLVIIAEDVQPEEIVAHLPLLCDEKKIPYVYVSSKKALGEACGL 92

Query: 182 KTASVLCLTTVKNEDKLEFSKILEAI 259
           + A+         E K    +I++ +
Sbjct: 93  QVATASAAILEPGEAKDLVDEIIKRV 118

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>RL7A_METTH (O26355) 50S ribosomal protein L7Ae|
          Length = 123

 Score = 53.9 bits (128), Expect = 2e-07
 Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
 Frame = +2

Query: 8   GLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSI--VHK 181
           G N VT  +E+  AQLV+IA DV+P E+V  LP L  + E+PY  +  K  LG+   ++ 
Sbjct: 35  GTNEVTKAVERGVAQLVLIAEDVEPAEIVAHLPLLAEEKEIPYIYIPTKDELGAAAGLNV 94

Query: 182 KTASVLCLTTVKNEDKLEFSKILEAIK 262
            TAS   +     ED ++  +I+E ++
Sbjct: 95  GTASSAIVEAGDAEDLIK--EIIEKVE 119

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>RL7A_METJA (P54066) 50S ribosomal protein L7Ae|
          Length = 117

 Score = 53.9 bits (128), Expect = 2e-07
 Identities = 32/83 (38%), Positives = 43/83 (51%)
 Frame = +2

Query: 2   KYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHK 181
           K G N VT  +E+  A+LV+IA DV P E+V  LP LC +  +PY  V  K  LG     
Sbjct: 28  KKGANEVTKAVERGIAKLVIIAEDVKPEEVVAHLPYLCEEKGIPYAYVASKQDLGKAAGL 87

Query: 182 KTASVLCLTTVKNEDKLEFSKIL 250
           + A+      + NE   E  K+L
Sbjct: 88  EVAA--SSVAIINEGDAEELKVL 108

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>NHPX_RAT (P55770) NHP2-like protein 1 (High mobility group-like nuclear|
           protein 2 homolog 1) (U4/U6.U5 tri-snRNP 15.5 kDa
           protein) (OTK27)
          Length = 127

 Score = 52.8 bits (125), Expect = 5e-07
 Identities = 23/76 (30%), Positives = 39/76 (51%)
 Frame = +2

Query: 8   GLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKT 187
           G N  T  + +  ++ +V+A D +P+E+++ LP LC    VPY  V+ K  LG       
Sbjct: 37  GANEATKTLNRGISEFIVMAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSR 96

Query: 188 ASVLCLTTVKNEDKLE 235
             + C  T+K   +L+
Sbjct: 97  PVIACSVTIKEGSQLK 112

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>NHPX_MOUSE (Q9D0T1) NHP2-like protein 1 (High mobility group-like nuclear|
           protein 2 homolog 1) (U4/U6.U5 tri-snRNP 15.5 kDa
           protein) (Sperm-specific antigen 1) (Fertilization
           antigen 1) (FA-1)
          Length = 127

 Score = 52.8 bits (125), Expect = 5e-07
 Identities = 23/76 (30%), Positives = 39/76 (51%)
 Frame = +2

Query: 8   GLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKT 187
           G N  T  + +  ++ +V+A D +P+E+++ LP LC    VPY  V+ K  LG       
Sbjct: 37  GANEATKTLNRGISEFIVMAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSR 96

Query: 188 ASVLCLTTVKNEDKLE 235
             + C  T+K   +L+
Sbjct: 97  PVIACSVTIKEGSQLK 112

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>NHPX_HUMAN (P55769) NHP2-like protein 1 (High mobility group-like nuclear|
           protein 2 homolog 1) (U4/U6.U5 tri-snRNP 15.5 kDa
           protein) (OTK27) (hSNU13)
          Length = 127

 Score = 52.8 bits (125), Expect = 5e-07
 Identities = 23/76 (30%), Positives = 39/76 (51%)
 Frame = +2

Query: 8   GLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKT 187
           G N  T  + +  ++ +V+A D +P+E+++ LP LC    VPY  V+ K  LG       
Sbjct: 37  GANEATKTLNRGISEFIVMAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSR 96

Query: 188 ASVLCLTTVKNEDKLE 235
             + C  T+K   +L+
Sbjct: 97  PVIACSVTIKEGSQLK 112

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>RL7A_METKA (Q8TV03) 50S ribosomal protein L7Ae|
          Length = 123

 Score = 52.4 bits (124), Expect = 6e-07
 Identities = 29/85 (34%), Positives = 43/85 (50%)
 Frame = +2

Query: 8   GLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKT 187
           G N  T  +E+ +A LV+IA DVDP E+V  LP LC +  +PY  V  K  LG+      
Sbjct: 35  GTNETTKAVEREEAVLVLIAEDVDPEEVVAHLPELCDEKGIPYVYVPSKDELGAAAGIDV 94

Query: 188 ASVLCLTTVKNEDKLEFSKILEAIK 262
           A+         + K    +I+E ++
Sbjct: 95  AAASACIIDPGDAKDLVDEIIEKVE 119

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>NHPX_DROME (Q9U3Z7) NHP2-like protein (Hoi-polloi protein)|
          Length = 127

 Score = 52.4 bits (124), Expect = 6e-07
 Identities = 26/76 (34%), Positives = 37/76 (48%)
 Frame = +2

Query: 8   GLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKT 187
           G N  T  + +  A +VV+A D +PIE+++ LP LC    VPY  V+ K  LG       
Sbjct: 37  GANEATKTLNRGLADIVVLAGDAEPIEILLHLPLLCEDKNVPYVFVRSKQALGRACGVSR 96

Query: 188 ASVLCLTTVKNEDKLE 235
             V C  T     +L+
Sbjct: 97  PIVACSVTTNEGSQLK 112

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>NHPX_CAEEL (Q21568) NHP2/L7aE family protein YEL026W homolog|
          Length = 128

 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
 Frame = +2

Query: 2   KYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHK 181
           K G N  T  + +  ++++V+A D +P+E+++ LP LC    VPY  V+ K+ LG     
Sbjct: 36  KKGANEATKTLNRGISEIIVMAADAEPLEILLHLPLLCEDKNVPYVFVRSKAALGRAC-G 94

Query: 182 KTASVLCLTTVKNED---KLEFSKILEAIK 262
            T  V+  +  +NE    K +  KI E ++
Sbjct: 95  VTRPVIAASITQNEGSQLKSQIQKIKEDVE 124

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>NHP2_YEAST (P32495) H/ACA ribonucleoprotein complex subunit 2 (H/ACA snoRNP|
           protein NHP2) (High mobility group-like nuclear protein
           2)
          Length = 156

 Score = 49.3 bits (116), Expect = 5e-06
 Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
 Frame = +2

Query: 2   KYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSI-VH 178
           K G+  V   + + +  LVVIA D+ P +++  +P LC    VPY  +  K  LG+    
Sbjct: 57  KRGVKEVVKALRKGEKGLVVIAGDISPADVISHIPVLCEDHSVPYIFIPSKQDLGAAGAT 116

Query: 179 KKTASVLCLTTVKNEDKLEFSKILEAIKANFNDKFDEVR 295
           K+  SV+ +    N+ K   +K  E  K +FN+   EV+
Sbjct: 117 KRPTSVVFIVPGSNKKKDGKNK-EEEYKESFNEVVKEVQ 154

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>RL7A_METAC (Q8TQL9) 50S ribosomal protein L7Ae|
          Length = 120

 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 21/56 (37%), Positives = 33/56 (58%)
 Frame = +2

Query: 2   KYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGS 169
           K G N  T  IE+  A+LV+IA D++P E+V  +  L  + + PY  +K +  LG+
Sbjct: 31  KKGTNEATKAIERGNAKLVLIAEDIEPAEIVAHIGPLSEEKKAPYIFIKNQKELGA 86

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>NOLA2_MOUSE (Q9CRB2) H/ACA ribonucleoprotein complex subunit 2 (Nucleolar|
           protein family A member 2) (snoRNP protein NHP2)
          Length = 153

 Score = 46.6 bits (109), Expect = 4e-05
 Identities = 23/86 (26%), Positives = 42/86 (48%)
 Frame = +2

Query: 8   GLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKT 187
           G+  V   + + +  ++V+A D  PIE+   LP LC    +PY  +  K+ LG+    K 
Sbjct: 63  GVKEVQKFVNKGEKGIMVLAGDTLPIEVYCHLPVLCEDQNLPYVYIPSKTDLGAATGSKR 122

Query: 188 ASVLCLTTVKNEDKLEFSKILEAIKA 265
            + + +     E +  + K LE ++A
Sbjct: 123 PTCVIMVKPHEEYQETYDKCLEEVQA 148

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>NHP2_SCHPO (Q9P7H0) H/ACA ribonucleoprotein complex subunit 2 (H/ACA snoRNP|
           protein NHP2) (High mobility group-like nuclear protein
           2) (P17-nhp2)
          Length = 154

 Score = 46.6 bits (109), Expect = 4e-05
 Identities = 25/98 (25%), Positives = 48/98 (48%)
 Frame = +2

Query: 8   GLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKT 187
           G+  V   + + +  LV++A D+ P++++  +P LC    VPY     K  LG   + K 
Sbjct: 57  GVKEVVKAVRKGEKGLVILAGDISPMDVISHIPVLCEDNNVPYLYTVSKELLGEASNTKR 116

Query: 188 ASVLCLTTVKNEDKLEFSKILEAIKANFNDKFDEVRKK 301
            +  C+  V    K + SK+ E     + + ++E+ K+
Sbjct: 117 PT-SCVMIVPGGKKKDMSKVEE-----YKESYEEIIKE 148

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>NOLA2_BRABE (Q8I7X7) H/ACA ribonucleoprotein complex subunit 2-like protein|
          Length = 159

 Score = 46.2 bits (108), Expect = 5e-05
 Identities = 24/72 (33%), Positives = 36/72 (50%)
 Frame = +2

Query: 8   GLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKT 187
           G+  V   I++ +  +V+IA D  PIE+   LP +C   ++PYC V  K  LG     K 
Sbjct: 69  GIRDVQKFIKKGERGIVLIAGDTTPIEVYCHLPVVCEDAKIPYCYVPAKQDLGEAAGSKR 128

Query: 188 ASVLCLTTVKNE 223
            +  C+    NE
Sbjct: 129 PT-CCVLLKPNE 139

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>NOLA2_DROYA (Q6XIP0) H/ACA ribonucleoprotein complex subunit 2-like protein|
          Length = 160

 Score = 45.8 bits (107), Expect = 6e-05
 Identities = 22/86 (25%), Positives = 44/86 (51%)
 Frame = +2

Query: 8   GLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKT 187
           GL  V   + + +  + + A DV P++++  LPA+C +  +PY     ++ LG+ +  K 
Sbjct: 70  GLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPYAYTPSRADLGAAMGVKR 129

Query: 188 ASVLCLTTVKNEDKLEFSKILEAIKA 265
            +V  L    +E K  + ++ E + A
Sbjct: 130 GTVALLVRQNDEYKDLYDEVKEELSA 155

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>RL7A_METMA (Q8PU74) 50S ribosomal protein L7Ae|
          Length = 120

 Score = 45.8 bits (107), Expect = 6e-05
 Identities = 21/56 (37%), Positives = 33/56 (58%)
 Frame = +2

Query: 2   KYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGS 169
           K G N  T  IE+  A+LV+IA D++P E+V  +  L  + + PY  +K +  LG+
Sbjct: 31  KKGTNEATKAIERGNAKLVLIAEDIEPAEIVAHIGPLSEEKKAPYIYIKNQKDLGA 86

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>NOLA2_CAEEL (Q9XXD4) Putative H/ACA ribonucleoprotein complex subunit 2-like|
           protein
          Length = 163

 Score = 45.4 bits (106), Expect = 8e-05
 Identities = 19/85 (22%), Positives = 45/85 (52%)
 Frame = +2

Query: 8   GLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKT 187
           G+  V   + +++  + ++A +V PI++   +P +C + E+PY  +  + +LG  V  + 
Sbjct: 72  GIKDVQKELRRNEKGICILAGNVSPIDVYSHIPGICEEKEIPYVYIPSREQLGLAVGHRR 131

Query: 188 ASVLCLTTVKNEDKLEFSKILEAIK 262
            S+L       + K  + ++ EA++
Sbjct: 132 PSILIFVKPSGDFKELYDEVAEALR 156

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>NOLA2_DROME (Q9V3U2) H/ACA ribonucleoprotein complex subunit 2-like protein|
           (Nucleolar protein family A member 2-like protein)
           (H/ACA snoRNP protein NHP2)
          Length = 160

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 22/86 (25%), Positives = 43/86 (50%)
 Frame = +2

Query: 8   GLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKT 187
           GL  V   + + +  + + A DV P++++  LPA+C +  +PY     ++ LG+ +  K 
Sbjct: 70  GLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPYTYTPSRADLGAAMGVKR 129

Query: 188 ASVLCLTTVKNEDKLEFSKILEAIKA 265
            +V  L     E K  + ++ E + A
Sbjct: 130 GTVALLVRQNEEYKDLYDEVKEELSA 155

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>NOLA2_XENTR (Q6P8C4) H/ACA ribonucleoprotein complex subunit 2-like protein|
          Length = 149

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 24/86 (27%), Positives = 42/86 (48%)
 Frame = +2

Query: 8   GLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKT 187
           G+  V   I + +  +VV+A D  PIE+   +P +C    +PY  V  KS LG+    K 
Sbjct: 59  GVKEVQKFINKGEKGIVVMAGDTLPIEVYCHIPVMCEDRGIPYSYVPSKSDLGAAAGSKR 118

Query: 188 ASVLCLTTVKNEDKLEFSKILEAIKA 265
            + + L     + +  + + LE ++A
Sbjct: 119 PTCVILIKPHEDYQEAYDECLEDVQA 144

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>NOLA2_XENLA (Q6NTV9) H/ACA ribonucleoprotein complex subunit 2-like protein|
          Length = 149

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 24/86 (27%), Positives = 42/86 (48%)
 Frame = +2

Query: 8   GLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKT 187
           G+  V   I + +  +VV+A D  PIE+   +P +C    +PY  V  KS LG+    K 
Sbjct: 59  GVKEVQKFINKGEKGIVVMAGDTLPIEVYCHIPVMCEDRGIPYSYVPSKSDLGAAAGSKR 118

Query: 188 ASVLCLTTVKNEDKLEFSKILEAIKA 265
            + + L     + +  + + LE ++A
Sbjct: 119 PTCVILIKPHEDYQEAYDECLEDVQA 144

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>SNU13_YEAST (P39990) 13 kDa ribonucleoprotein-associated protein|
          Length = 126

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 19/55 (34%), Positives = 31/55 (56%)
 Frame = +2

Query: 2   KYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLG 166
           K G N  T  + +  ++ +++A D +PIE+++ LP LC    VPY  V  +  LG
Sbjct: 34  KKGANEATKTLNRGISEFIIMAADCEPIEILLHLPLLCEDKNVPYVFVPSRVALG 88

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>NOLA2_BOVIN (Q5E950) H/ACA ribonucleoprotein complex subunit 2 (Nucleolar|
           protein family A member 2)
          Length = 153

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 22/86 (25%), Positives = 42/86 (48%)
 Frame = +2

Query: 8   GLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKT 187
           G+  V   I + +  ++V+A D  PIE+   LP +C    +PY  +  K+ LG+    K 
Sbjct: 63  GVKEVQKFINKGEKGIMVLAGDTLPIEVYCHLPVMCEDRNLPYVYIPSKTDLGAAAGSKR 122

Query: 188 ASVLCLTTVKNEDKLEFSKILEAIKA 265
            + + +     E +  + + LE ++A
Sbjct: 123 PTCVIMVKPHEEYQEAYDECLEEVQA 148

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>NOLA2_ARATH (Q9LEY9) H/ACA ribonucleoprotein complex subunit 2-like protein|
           (Nhp2-like protein)
          Length = 156

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 26/99 (26%), Positives = 46/99 (46%)
 Frame = +2

Query: 2   KYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHK 181
           K G+  V   I + +  L VIA ++ PI+++  LP LC +  VPY  V  K  L      
Sbjct: 52  KRGVKEVVKSIRRGQKGLCVIAGNISPIDVITHLPILCEEAGVPYVYVPSKEDLAQAGAT 111

Query: 182 KTASVLCLTTVKNEDKLEFSKILEAIKANFNDKFDEVRK 298
           K  +   L  +K       ++ L  +K ++    D++++
Sbjct: 112 KRPTCCVLVMLKPAKGDLTAEELAKLKTDYEQVSDDIKE 150

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>NOLA2_PONPY (Q5RC65) H/ACA ribonucleoprotein complex subunit 2 (Nucleolar|
           protein family A member 2)
          Length = 153

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 20/86 (23%), Positives = 43/86 (50%)
 Frame = +2

Query: 8   GLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKT 187
           G+  V   + + +  ++V+A D  PIE+   LP +C    +PY  +  K+ LG+    K 
Sbjct: 63  GVKEVQKFVNKGEKGIMVLAGDTLPIEVYCHLPVMCEDRNLPYVYIPSKTDLGAAAGSKR 122

Query: 188 ASVLCLTTVKNEDKLEFSKILEAIKA 265
            + + +    +E +  + + LE +++
Sbjct: 123 PTCVIMVKPHDEYQEAYDECLEEVQS 148

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>NOLA2_HUMAN (Q9NX24) H/ACA ribonucleoprotein complex subunit 2 (Nucleolar|
           protein family A member 2) (snoRNP protein NHP2)
          Length = 153

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 20/86 (23%), Positives = 42/86 (48%)
 Frame = +2

Query: 8   GLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKT 187
           G+  V   + + +  ++V+A D  PIE+   LP +C    +PY  +  K+ LG+    K 
Sbjct: 63  GVKEVQKFVNKGEKGIMVLAGDTLPIEVYCHLPVMCEDRNLPYVYIPSKTDLGAAAGSKR 122

Query: 188 ASVLCLTTVKNEDKLEFSKILEAIKA 265
            + + +     E +  + + LE +++
Sbjct: 123 PTCVIMVKPHEEYQEAYDECLEEVQS 148

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>NOLA2_CAEBR (Q60YI3) Putative H/ACA ribonucleoprotein complex subunit 2-like|
           protein
          Length = 163

 Score = 42.4 bits (98), Expect = 7e-04
 Identities = 18/84 (21%), Positives = 44/84 (52%)
 Frame = +2

Query: 8   GLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKT 187
           G+  V   + +++  + ++A +V PI++   +PA+C + E+PY  +  + +LG  V  + 
Sbjct: 72  GIKDVQKELRKNEKGICILAGNVSPIDVYSHIPAICEEKEIPYVYIPSREQLGLAVGHRR 131

Query: 188 ASVLCLTTVKNEDKLEFSKILEAI 259
            S+L       + +  + ++ E +
Sbjct: 132 PSILIFVKPSADFQELYDEVAETL 155

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>NOLA2_BRARE (Q6PBV6) H/ACA ribonucleoprotein complex subunit 2-like protein|
           (Nucleolar protein family A member 2-like protein)
          Length = 150

 Score = 42.4 bits (98), Expect = 7e-04
 Identities = 23/84 (27%), Positives = 39/84 (46%)
 Frame = +2

Query: 8   GLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKT 187
           G+  V   I + +  +VV A D  PI++   LP +C    +PY  V  K  LGS    K 
Sbjct: 60  GVKEVQKFINKGETGIVVFAGDTLPIDVYCHLPIMCEDRSLPYAYVPSKVDLGSSAGSKR 119

Query: 188 ASVLCLTTVKNEDKLEFSKILEAI 259
            + + +    +E K  + + +E +
Sbjct: 120 PTCVIMIKPHDEYKEAYDECVEEV 143

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>RS12A_ARATH (Q9S9P1) 40S ribosomal protein S12-1|
          Length = 144

 Score = 34.3 bits (77), Expect = 0.18
 Identities = 21/53 (39%), Positives = 27/53 (50%)
 Frame = +2

Query: 8   GLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLG 166
           GL+    LIE+  AQLVV+A D +  + V  + ALC   EV    V     LG
Sbjct: 47  GLHECAKLIEKRVAQLVVLAEDCNQPDYVKLVKALCADHEVRLLTVPSAKTLG 99

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>PARP1_CHICK (P26446) Poly [ADP-ribose] polymerase 1 (EC 2.4.2.30) (PARP-1)|
           (ADPRT) (NAD(+) ADP-ribosyltransferase 1)
           (Poly[ADP-ribose] synthetase 1)
          Length = 1011

 Score = 33.1 bits (74), Expect = 0.40
 Identities = 24/85 (28%), Positives = 36/85 (42%)
 Frame = +2

Query: 131 PYCIVKGKSRLGSIVHKKTASVLCLTTVKNEDKLEFSKILEAIKANFNDKFDEVRKKWGG 310
           P C V  ++ LG +       +L  + +K EDK    K L A K     K +EV     G
Sbjct: 160 PDCFVSRRAELGFLPAYGATQLLGFSILKAEDKETLKKQLPATKTEGKRKGEEV----DG 215

Query: 311 GVMGSKSQAKTKARERLIAKEAAQR 385
            V+  K   K K +E    K+  ++
Sbjct: 216 NVVAKKKSRKEKEKESKQEKQLKEQ 240

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>PARP1_RAT (P27008) Poly [ADP-ribose] polymerase 1 (EC 2.4.2.30) (PARP-1)|
           (ADPRT) (NAD(+) ADP-ribosyltransferase 1)
           (Poly[ADP-ribose] synthetase 1)
          Length = 1013

 Score = 32.0 bits (71), Expect = 0.90
 Identities = 24/87 (27%), Positives = 35/87 (40%), Gaps = 9/87 (10%)
 Frame = +2

Query: 131 PYCIVKGKSRLGSIVHKKTASVLCLTTVKNEDKLEFSKILEAIKANFNDKFDEV------ 292
           P C VK +  LG       + +   + +  EDK    K L A+K+    K DEV      
Sbjct: 159 PTCFVKNRDELGFRPEYSASQLKGFSLLSAEDKEALKKQLPAVKSEGKRKCDEVDGIDEV 218

Query: 293 ---RKKWGGGVMGSKSQAKTKARERLI 364
              + K G     SK +   KA+  L+
Sbjct: 219 AKKKSKKGKDKESSKLEKALKAQNELV 245

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>DRL26_ARATH (Q84WD3) Probable disease resistance protein At4g19060|
          Length = 383

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = +2

Query: 215 KNEDKLEFSKILEAIKANFNDKFDEVRKKWGGGVM-GSKSQ 334
           K E K EF K LE IK++FN++++    KW  G   GS S+
Sbjct: 14  KLESKSEFDKELEKIKSSFNEEYE----KWSSGKQRGSSSK 50

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>RS12_HORVU (Q9XHS0) 40S ribosomal protein S12|
          Length = 143

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 19/53 (35%), Positives = 24/53 (45%)
 Frame = +2

Query: 8   GLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLG 166
           GL      IE+  AQL V+A D D  + V  + ALC +  V    V     LG
Sbjct: 46  GLREAAKSIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLG 98

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>RS12C_ARATH (Q9SKZ3) 40S ribosomal protein S12-3|
          Length = 144

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 18/53 (33%), Positives = 25/53 (47%)
 Frame = +2

Query: 8   GLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLG 166
           GL+    LIE+  AQL V+A D +  + V  + ALC    +    V     LG
Sbjct: 47  GLHESAKLIEKRNAQLCVLAEDCNQPDYVKLVKALCADHSIKLLTVPSAKTLG 99

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>CFAI_HUMAN (P05156) Complement factor I precursor (EC 3.4.21.45) (C3B/C4B|
           inactivator) [Contains: Complement factor I heavy chain;
           Complement factor I light chain]
          Length = 583

 Score = 30.0 bits (66), Expect = 3.4
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +1

Query: 160 PWIDCSQEDCLCSVPHHCEERGQA 231
           PW  C +  C+C +P+ C + G A
Sbjct: 50  PWQRCIEGTCVCKLPYQCPKNGTA 73

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>LCN2_LACLA (P37609) Lacticin 481/lactococcin biosynthesis protein lcnDR2|
          Length = 922

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 17/55 (30%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
 Frame = +2

Query: 140 IVKGKSRLGSIVHKKTASVLCLTTVKNEDKLEFSKILEAIKAN-FNDKFDEVRKK 301
           IVK K ++   + K+++SV C    +N   +E+S +L A K+  +++K +E+ +K
Sbjct: 378 IVKNKEKILGFLKKESSSVTCRILFRN--TMEYSVLLNAAKSPVYSNKREEIFEK 430

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>Y640_HAEDU (Q7VNB5) UPF0341 protein HD_0640|
          Length = 251

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
 Frame = +2

Query: 170 IVHKKTASVLCLTTVKNEDKLEFSKI----LEAIKANFNDKFDEVRKKWGGG 313
           +VH K+AS   L  V  + +LE  K+    L AI  NF D     R+K+GGG
Sbjct: 24  LVHDKSAS---LALVLTDTRLELRKLDEAKLGAIAVNFVDGTLAHRRKFGGG 72

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>PARP1_CRIGR (Q9R152) Poly [ADP-ribose] polymerase 1 (EC 2.4.2.30) (PARP-1)|
           (ADPRT) (NAD(+) ADP-ribosyltransferase 1)
           (Poly[ADP-ribose] synthetase 1)
          Length = 1012

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 21/80 (26%), Positives = 32/80 (40%)
 Frame = +2

Query: 131 PYCIVKGKSRLGSIVHKKTASVLCLTTVKNEDKLEFSKILEAIKANFNDKFDEVRKKWGG 310
           P C VK +  LG       + +   + +  EDK    K L  +K+    K DEV    G 
Sbjct: 159 PTCFVKNREELGFRPEYSASQLKGFSLLSAEDKEVLKKQLPGVKSEGKRKGDEVD---GA 215

Query: 311 GVMGSKSQAKTKARERLIAK 370
             +  K   K K ++  + K
Sbjct: 216 DEVAKKKSKKGKDKDSKLEK 235

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>PARP1_HUMAN (P09874) Poly [ADP-ribose] polymerase 1 (EC 2.4.2.30) (PARP-1)|
           (ADPRT) (NAD(+) ADP-ribosyltransferase 1)
           (Poly[ADP-ribose] synthetase 1)
          Length = 1013

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 21/80 (26%), Positives = 32/80 (40%)
 Frame = +2

Query: 131 PYCIVKGKSRLGSIVHKKTASVLCLTTVKNEDKLEFSKILEAIKANFNDKFDEVRKKWGG 310
           P C VK +  LG       + +   + +  EDK    K L  +K+    K DEV    G 
Sbjct: 159 PGCFVKNREELGFRPEYSASQLKGFSLLATEDKEALKKQLPGVKSEGKRKGDEVD---GV 215

Query: 311 GVMGSKSQAKTKARERLIAK 370
             +  K   K K ++  + K
Sbjct: 216 DEVAKKKSKKEKDKDSKLEK 235

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>PARP1_MOUSE (P11103) Poly [ADP-ribose] polymerase 1 (EC 2.4.2.30) (PARP-1)|
           (ADPRT) (NAD(+) ADP-ribosyltransferase 1)
           (Poly[ADP-ribose] synthetase 1) (msPARP)
          Length = 1012

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 23/75 (30%), Positives = 31/75 (41%)
 Frame = +2

Query: 131 PYCIVKGKSRLGSIVHKKTASVLCLTTVKNEDKLEFSKILEAIKANFNDKFDEVRKKWGG 310
           P C VK +  LG       + +   + +  EDK    K L AIK     K DEV      
Sbjct: 159 PTCFVKKRDELGFRPEYSASQLKGFSLLSAEDKEALKKQLPAIKNEGKRKGDEVD----- 213

Query: 311 GVMGSKSQAKTKARE 355
              G+   AK K+R+
Sbjct: 214 ---GTDEVAKKKSRK 225

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>LRAT_RAT (Q9JI61) Lecithin retinol acyltransferase (EC 2.3.1.135)|
           (Phosphatidylcholine--retinol O-acyltransferase)
          Length = 231

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = -1

Query: 301 LLPDLIELVIEVRLDSLQDLAELKLVLVLHSGEAQNRGSLL 179
           LLP +I  V  +R+D+++D A    +LV H  E   + SLL
Sbjct: 97  LLPGVICKVASIRVDTVEDFAYGADILVNHLDETLKKKSLL 137

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>PETD_EMIHU (Q4G3F7) Cytochrome b6-f complex subunit 4 (17 kDa polypeptide)|
          Length = 160

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -3

Query: 155 IFP*QCSMGPPSSCIGLGATQPAQLGQ 75
           IFP  C +G  + CIGLG  +P  LG+
Sbjct: 39  IFP-VCILGTIACCIGLGVLEPTPLGE 64

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>MFD_HAEIN (P45128) Transcription-repair coupling factor (EC 3.6.1.-) (TRCF)|
            (ATP-dependent helicase mfd)
          Length = 1146

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
 Frame = -1

Query: 409  HINLGLVHPLRSLLGDEPFPXXXXXXXXGAHDTTTPLLPDLIELVIEVRLDSLQDLAEL- 233
            H  L  +H LR  +G              A+  T P  P ++    E RLD+L++L  L 
Sbjct: 892  HFGLAQLHQLRGRVG-------RSHHQAYAYLLTPP--PKMMTKDAERRLDALENLDNLG 942

Query: 232  -KLVLVLHSGEAQNRGSLLVNNRS 164
               +L  H  E +  G LL N +S
Sbjct: 943  AGFILATHDLEIRGAGELLGNEQS 966

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>CFAI_MOUSE (Q61129) Complement factor I precursor (EC 3.4.21.45) (C3B/C4B|
           inactivator) [Contains: Complement factor I heavy chain;
           Complement factor I light chain]
          Length = 603

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +1

Query: 160 PWIDCSQEDCLCSVPHHCEERG 225
           PW  C +  C+C +P+ C   G
Sbjct: 53  PWQRCIEGTCICKLPYQCPRAG 74


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,099,243
Number of Sequences: 219361
Number of extensions: 1196814
Number of successful extensions: 3742
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 3675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3741
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3362826254
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result