ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags4k02 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK102436.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093J18, full insert sequence Length = 1094 Score = 339 bits (171), Expect = 6e-90 Identities = 434/521 (83%), Gaps = 3/521 (0%) Strand = Plus / Plus Query: 12 aatgtgttgaaggcttgcaacgaggcaaaagttaagcgagttgtcatagtgtcttcatgt 71 |||||||||||||| ||| | |||||||||||||||||||||||||| |||||||| | Sbjct: 362 aatgtgttgaaggcctgccatgaggcaaaagttaagcgagttgtcatggtgtcttccatt 421 Query: 72 gctgctgtgttcaacaatcctaactggcccaagggcaaagtatttactgaagacagctgg 131 ||||| ||||||| |||||||||||||| |||| || | || ||||||||||| ||| Sbjct: 422 gctgccgtgttcagtaatcctaactggccaaaggataaggctttcactgaagacagttgg 481 Query: 132 tcagacgaggatctgtgcagaaagggtgaggattggtatttgctttccaaaacgcgcgca 191 ||||| ||||| | ||||||||| | |||||||||||| ||||| |||||| ||| Sbjct: 482 tcagatgaggaattatgcagaaagaatcaggattggtattacctttcgaaaacggtggca 541 Query: 192 gagcgtgaggcttttgcttatgcagcgaaaactgggatggatgttgtagctattctacca 251 |||||||||||||||||||||||||| ||||||||| |||| ||||| ||||| ||| Sbjct: 542 gagcgtgaggcttttgcttatgcagcaaaaactgggctggacattgtaactatttgccca 601 Query: 252 tcattggtacttggccccttgatgcagccaacagtgaatgcgagcagtaaaattctcctc 311 |||||||| |||| ||||| ||||| | ||||| || ||||| |||||| ||||| | Sbjct: 602 tcattggtgattggacccttaatgcaatctacagtaaacgcgagtagtaaagttctcatt 661 Query: 312 aaatatctcaaaggagaacatgagactgtagaaaatagattctggaatctagtggatgtc 371 || ||| |||||||||| | ||| ||||| ||||||||| || ||||| |||||||||| Sbjct: 662 aactatttcaaaggagatcgtgacactgtcgaaaatagactccggaatgtagtggatgtt 721 Query: 372 cgtgatgttgccgatgctcttcttctggcatatgaaaatccagaggcatctggacggtac 431 |||||||||||| ||||||| ||| |||| |||||||||||| ||||| ||||| ||| Sbjct: 722 cgtgatgttgccaatgctctccttttggcgtatgaaaatcca---gcatccggacgatac 778 Query: 432 atctgcagtccagtacgaataaaagtttctgatgtcataaacattctgaagaccttatat 491 |||||||| ||| | ||||| ||| |||||| | ||||||||| | |||||||||||| Sbjct: 779 atctgcagctcagctccaataagagtctctgatatgataaacattttaaagaccttatat 838 Query: 492 ccaacatacacttatcccaaaaactttacggaggtggaaga 532 ||||| || |||||||||||||||||| ||| |||||||| Sbjct: 839 ccaacttatacttatcccaaaaactttgtggatgtggaaga 879 Score = 44.1 bits (22), Expect = 0.52 Identities = 37/42 (88%) Strand = Plus / Plus Query: 546 agttctgagaaacttcagaagctagggtggaccttcaggcct 587 |||| |||||||||||||||||| || |||| ||||||||| Sbjct: 893 agttttgagaaacttcagaagcttggctggagtttcaggcct 934
>gb|BT018028.1| Zea mays clone EL01N0529H05.c mRNA sequence Length = 1336 Score = 174 bits (88), Expect = 2e-40 Identities = 289/356 (81%) Strand = Plus / Plus Query: 159 gaggattggtatttgctttccaaaacgcgcgcagagcgtgaggcttttgcttatgcagcg 218 |||||||||||||| ||||||| || | || || || |||||||||| ||||||||| Sbjct: 522 gaggattggtattttgtttccaagacactggcggaacgagaggcttttgtttatgcagca 581 Query: 219 aaaactgggatggatgttgtagctattctaccatcattggtacttggccccttgatgcag 278 ||||| ||| ||||||||||| ||||| || || || ||| |||| |||||||||||| Sbjct: 582 aaaacagggctggatgttgtaactatttgcccgtcgttagtatttggacccttgatgcag 641 Query: 279 ccaacagtgaatgcgagcagtaaaattctcctcaaatatctcaaaggagaacatgagact 338 || ||||| ||| ||||||| ||||| |||| |||||| ||| |||||| | |||||| Sbjct: 642 cctacagtaaattcgagcagcaaaatcatccttaaatatttcacaggagatcgcgagact 701 Query: 339 gtagaaaatagattctggaatctagtggatgtccgtgatgttgccgatgctcttcttctg 398 || ||||| | | || | ||| | |||||||| ||||||||||| || |||||||||||| Sbjct: 702 gttgaaaacatactcagaaatatggtggatgttcgtgatgttgctgacgctcttcttctg 761 Query: 399 gcatatgaaaatccagaggcatctggacggtacatctgcagtccagtacgaataaaagtt 458 || || ||||| ||||| || |||||||| |||||||||||| || ||||||| | Sbjct: 762 gcttacgaaaagccagaagcgtctggacgatacatctgcagttcacatgcaataaaaagt 821 Query: 459 tctgatgtcataaacattctgaagaccttatatccaacatacacttatcccaaaaa 514 ||||| | |||||||| ||||||||||| |||||| | ||| ||||||||||||| Sbjct: 822 gctgatatgataaacatactgaagaccttgtatccatcttacccttatcccaaaaa 877 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 11 caatgtgttgaaggcttgcaacgaggcaaaagttaagcgagttgtcatagtgtcttcatg 70 ||||||||| ||||||||| | |||||||||||| ||||||||| | || |||||||| Sbjct: 374 caatgtgttaaaggcttgctatgaggcaaaagttgggcgagttgtggtggtctcttcatg 433 Query: 71 tgctgctgt 79 ||| ||||| Sbjct: 434 tgcagctgt 442 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 549 tctgagaaacttcagaagctagggtggaccttcaggcctgtagag 593 ||||||||||| |||||||| ||||||| ||||| |||| ||||| Sbjct: 912 tctgagaaactgcagaagctggggtggagcttcaagcctatagag 956
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 139 bits (70), Expect = 1e-29 Identities = 162/192 (84%), Gaps = 3/192 (1%) Strand = Plus / Minus Query: 323 aggagaacatgagactgtagaaaatagattctggaatctagtggatgtccgtgatgttgc 382 |||||| | ||| ||||| ||||||||| || ||||| |||||||||| ||||||||||| Sbjct: 24690810 aggagatcgtgacactgtcgaaaatagactccggaatgtagtggatgttcgtgatgttgc 24690751 Query: 383 cgatgctcttcttctggcatatgaaaatccagaggcatctggacggtacatctgcagtcc 442 | ||||||| ||| |||| |||||||||||| ||||| ||||| ||||||||||| | Sbjct: 24690750 caatgctctccttttggcgtatgaaaatcca---gcatccggacgatacatctgcagctc 24690694 Query: 443 agtacgaataaaagtttctgatgtcataaacattctgaagaccttatatccaacatacac 502 || | ||||| ||| |||||| | ||||||||| | ||||||||||||||||| || || Sbjct: 24690693 agctccaataagagtctctgatatgataaacattttaaagaccttatatccaacttatac 24690634 Query: 503 ttatcccaaaaa 514 |||||||||||| Sbjct: 24690633 ttatcccaaaaa 24690622 Score = 111 bits (56), Expect = 3e-21 Identities = 122/144 (84%) Strand = Plus / Minus Query: 12 aatgtgttgaaggcttgcaacgaggcaaaagttaagcgagttgtcatagtgtcttcatgt 71 |||||||||||||| ||| | |||||||||||||||||||||||||| |||||||| | Sbjct: 24691652 aatgtgttgaaggcctgccatgaggcaaaagttaagcgagttgtcatggtgtcttccatt 24691593 Query: 72 gctgctgtgttcaacaatcctaactggcccaagggcaaagtatttactgaagacagctgg 131 ||||| ||||||| |||||||||||||| |||| || | || ||||||||||| ||| Sbjct: 24691592 gctgccgtgttcagtaatcctaactggccaaaggataaggctttcactgaagacagttgg 24691533 Query: 132 tcagacgaggatctgtgcagaaag 155 ||||| ||||| | ||||||||| Sbjct: 24691532 tcagatgaggaattatgcagaaag 24691509 Score = 99.6 bits (50), Expect = 1e-17 Identities = 137/166 (82%) Strand = Plus / Minus Query: 160 aggattggtatttgctttccaaaacgcgcgcagagcgtgaggcttttgcttatgcagcga 219 |||||||||||| ||||| |||||| ||||||||||||||||||||||||||||| | Sbjct: 24691224 aggattggtattacctttcgaaaacggtggcagagcgtgaggcttttgcttatgcagcaa 24691165 Query: 220 aaactgggatggatgttgtagctattctaccatcattggtacttggccccttgatgcagc 279 |||||||| |||| ||||| ||||| ||||||||||| |||| ||||| ||||| Sbjct: 24691164 aaactgggctggacattgtaactatttgcccatcattggtgattggacccttaatgcaat 24691105 Query: 280 caacagtgaatgcgagcagtaaaattctcctcaaatatctcaaagg 325 | ||||| || ||||| |||||| ||||| | || ||| ||||||| Sbjct: 24691104 ctacagtaaacgcgagtagtaaagttctcattaactatttcaaagg 24691059 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 363 gtggatgtccgtgatgttgccgatgctcttctt 395 ||||||||| | ||||||||||||||||||||| Sbjct: 24704088 gtggatgtcagggatgttgccgatgctcttctt 24704056 Score = 44.1 bits (22), Expect = 0.52 Identities = 37/42 (88%) Strand = Plus / Minus Query: 546 agttctgagaaacttcagaagctagggtggaccttcaggcct 587 |||| |||||||||||||||||| || |||| ||||||||| Sbjct: 24690216 agttttgagaaacttcagaagcttggctggagtttcaggcct 24690175 Score = 40.1 bits (20), Expect = 8.1 Identities = 44/52 (84%) Strand = Plus / Minus Query: 249 ccatcattggtacttggccccttgatgcagccaacagtgaatgcgagcagta 300 ||||| ||||| |||| || ||| |||| ||||| |||||||||||||||| Sbjct: 24704543 ccatcgttggtgattggacctttgctgcaaccaactgtgaatgcgagcagta 24704492
>dbj|AP004680.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0029G06 Length = 169711 Score = 139 bits (70), Expect = 1e-29 Identities = 162/192 (84%), Gaps = 3/192 (1%) Strand = Plus / Minus Query: 323 aggagaacatgagactgtagaaaatagattctggaatctagtggatgtccgtgatgttgc 382 |||||| | ||| ||||| ||||||||| || ||||| |||||||||| ||||||||||| Sbjct: 24491 aggagatcgtgacactgtcgaaaatagactccggaatgtagtggatgttcgtgatgttgc 24432 Query: 383 cgatgctcttcttctggcatatgaaaatccagaggcatctggacggtacatctgcagtcc 442 | ||||||| ||| |||| |||||||||||| ||||| ||||| ||||||||||| | Sbjct: 24431 caatgctctccttttggcgtatgaaaatcca---gcatccggacgatacatctgcagctc 24375 Query: 443 agtacgaataaaagtttctgatgtcataaacattctgaagaccttatatccaacatacac 502 || | ||||| ||| |||||| | ||||||||| | ||||||||||||||||| || || Sbjct: 24374 agctccaataagagtctctgatatgataaacattttaaagaccttatatccaacttatac 24315 Query: 503 ttatcccaaaaa 514 |||||||||||| Sbjct: 24314 ttatcccaaaaa 24303 Score = 111 bits (56), Expect = 3e-21 Identities = 122/144 (84%) Strand = Plus / Minus Query: 12 aatgtgttgaaggcttgcaacgaggcaaaagttaagcgagttgtcatagtgtcttcatgt 71 |||||||||||||| ||| | |||||||||||||||||||||||||| |||||||| | Sbjct: 25333 aatgtgttgaaggcctgccatgaggcaaaagttaagcgagttgtcatggtgtcttccatt 25274 Query: 72 gctgctgtgttcaacaatcctaactggcccaagggcaaagtatttactgaagacagctgg 131 ||||| ||||||| |||||||||||||| |||| || | || ||||||||||| ||| Sbjct: 25273 gctgccgtgttcagtaatcctaactggccaaaggataaggctttcactgaagacagttgg 25214 Query: 132 tcagacgaggatctgtgcagaaag 155 ||||| ||||| | ||||||||| Sbjct: 25213 tcagatgaggaattatgcagaaag 25190 Score = 99.6 bits (50), Expect = 1e-17 Identities = 137/166 (82%) Strand = Plus / Minus Query: 160 aggattggtatttgctttccaaaacgcgcgcagagcgtgaggcttttgcttatgcagcga 219 |||||||||||| ||||| |||||| ||||||||||||||||||||||||||||| | Sbjct: 24905 aggattggtattacctttcgaaaacggtggcagagcgtgaggcttttgcttatgcagcaa 24846 Query: 220 aaactgggatggatgttgtagctattctaccatcattggtacttggccccttgatgcagc 279 |||||||| |||| ||||| ||||| ||||||||||| |||| ||||| ||||| Sbjct: 24845 aaactgggctggacattgtaactatttgcccatcattggtgattggacccttaatgcaat 24786 Query: 280 caacagtgaatgcgagcagtaaaattctcctcaaatatctcaaagg 325 | ||||| || ||||| |||||| ||||| | || ||| ||||||| Sbjct: 24785 ctacagtaaacgcgagtagtaaagttctcattaactatttcaaagg 24740 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 363 gtggatgtccgtgatgttgccgatgctcttctt 395 ||||||||| | ||||||||||||||||||||| Sbjct: 37769 gtggatgtcagggatgttgccgatgctcttctt 37737 Score = 44.1 bits (22), Expect = 0.52 Identities = 37/42 (88%) Strand = Plus / Minus Query: 546 agttctgagaaacttcagaagctagggtggaccttcaggcct 587 |||| |||||||||||||||||| || |||| ||||||||| Sbjct: 23897 agttttgagaaacttcagaagcttggctggagtttcaggcct 23856 Score = 40.1 bits (20), Expect = 8.1 Identities = 44/52 (84%) Strand = Plus / Minus Query: 249 ccatcattggtacttggccccttgatgcagccaacagtgaatgcgagcagta 300 ||||| ||||| |||| || ||| |||| ||||| |||||||||||||||| Sbjct: 38224 ccatcgttggtgattggacctttgctgcaaccaactgtgaatgcgagcagta 38173
>gb|AY107063.1| Zea mays PCO100324 mRNA sequence Length = 999 Score = 139 bits (70), Expect = 1e-29 Identities = 344/430 (80%), Gaps = 4/430 (0%) Strand = Plus / Plus Query: 11 caatgtgttgaaggcttgcaacgaggcaaaagttaagcgagttgtcatagtgtcttcatg 70 ||||||||| ||||||||| | ||||||||||||||||||||||| | |||||||| Sbjct: 507 caatgtgttaaaggcttgctatgaggcaaaagttaagcgagttgtggtggtgtcttctgt 566 Query: 71 tgctgctgtgttcaacaatcctaactggcccaagggcaaagtatttactgaagacagctg 130 | | ||||| |||| || ||||| ||||| |||| ||| || ||| ||||||| || Sbjct: 567 ttcagctgtattcagtaaccctaattggcctaaggacaaggtctttgatgaagactcttg 626 Query: 131 gtcagacgaggatctgtgcagaaagggtgaggattggtatttgctttccaaaacgcgcgc 190 ||||||||||||| ||||| ||| |||||||||||||| ||||| ||||| | | Sbjct: 627 gtcagacgaggattattgcaggaagaatgaggattggtattatctttctaaaactctatc 686 Query: 191 agagcgtgaggcttttgcttatgcagcgaaaactgggatggatgttgtagctattctacc 250 || |||||||||||||||| |||||| ||| | ||| || |||||||| ||||| || Sbjct: 687 cgaacgtgaggcttttgcttttgcagcaaaatcggggctgaatgttgtaactatttgccc 746 Query: 251 atcatt-ggtacttggccccttgatgcagccaacagtgaatgcgagcagtaaaattctcc 309 || || |||| |||| |||||||||||| | | ||| ||| ||| ||||||| | |||| Sbjct: 747 gtccttgggtatttgggcccttgatgcagtctatagtaaatacgaacagtaaagtactcc 806 Query: 310 tcaaatatctcaaaggagaacatgagactgtagaaaatagattctggaatctagtggatg 369 | || ||| |||||||||| | ||||||||| ||||| ||| || | ||| | ||||||| Sbjct: 807 ttaattatttcaaaggagatcgtgagactgttgaaaacagactcagaaatat-gtggatg 865 Query: 370 tccgtgatgttgccgatgctcttcttctggcatatgaaaatccagaggcatctggacggt 429 | ||||||||||| ||| ||| | |||| || || ||||||| ||| ||||||||||| | Sbjct: 866 ttcgtgatgttgctgat-ctcctgttct-gcttacgaaaatcaagaagcatctggacgat 923 Query: 430 acatctgcag 439 |||||||||| Sbjct: 924 acatctgcag 933
>gb|AY103770.1| Zea mays PCO100327 mRNA sequence Length = 1333 Score = 115 bits (58), Expect = 2e-22 Identities = 312/396 (78%), Gaps = 3/396 (0%) Strand = Plus / Plus Query: 119 tgaagacagctggtcagacgaggatctgtgcagaaagggtgaggattggtatttgctttc 178 ||||||| |||||||||| |||||| ||||| ||| |||||||||||||| |||| Sbjct: 556 tgaagactgctggtcagatgaggattactgcaggaagaaggaggattggtatttagtttc 615 Query: 179 caaaacgcgcgcagagcgtgaggcttttgcttatgcagcgaaaactgggatggatgttgt 238 |||||| | | || || || ||| |||||| |||||| ||||| ||| |||| ||||| Sbjct: 616 caaaacactgtcggaacgagaagctcttgcttttgcagcaaaaacagggctggacgttgt 675 Query: 239 agctattctaccatcattggtacttggccccttgatgcagccaacagtgaatgcgagcag 298 | || || || ||||| ||| |||| |||||||||||||| ||||| ||| |||||| Sbjct: 676 aactgtttgtccgtcattagtatttggacccttgatgcagcctacagtaaatttgagcag 735 Query: 299 taaaattctcctcaaatatctcaaaggagaacatgagactgtagaaaatagattctggaa 358 |||| |||| |||||| |||||| | | |||||||| |||||| | || | || Sbjct: 736 cgaaatgatccttaaatatttcaaag---atctcgagactgttgaaaatgtactcagtaa 792 Query: 359 tctagtggatgtccgtgatgttgccgatgctcttcttctggcatatgaaaatccagaggc 418 | | |||||| | ||||||||||| ||||||||||||||| | || ||||| ||||| || Sbjct: 793 tatggtggatattcgtgatgttgctgatgctcttcttctgacttacgaaaagccagaagc 852 Query: 419 atctggacggtacatctgcagtccagtacgaataaaagtttctgatgtcataaacattct 478 |||||||| |||||||||||| || ||||||| |||||||| | |||||||| || Sbjct: 853 gtctggacgatacatctgcagttcacatgcaataaaaatttctgatatgataaacatact 912 Query: 479 gaagaccttatatccaacatacacttatcccaaaaa 514 ||||||| | ||||| | ||| ||||||||||||| Sbjct: 913 gaagaccatgtatccgtcttacccttatcccaaaaa 948 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 11 caatgtgttgaaggcttgcaacgaggcaaaagttaagcgagttgtcatagtgtcttcatg 70 ||||||||| ||||||||| | ||||||||||||| ||||||||| | ||||||||||| Sbjct: 449 caatgtgttaaaggcttgctatgaggcaaaagttaggcgagttgtggtggtgtcttcatg 508 Query: 71 tgctgctgtgt 81 || ||||||| Sbjct: 509 tggagctgtgt 519 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 549 tctgagaaacttcagaagctagggtggaccttcaggcctgtagag 593 ||||||||||| |||||||| ||||||||||||| |||| ||||| Sbjct: 983 tctgagaaactgcagaagctggggtggaccttcaagcctatagag 1027
>gb|BT017666.1| Zea mays clone EL01N0441F03.c mRNA sequence Length = 869 Score = 99.6 bits (50), Expect = 1e-17 Identities = 310/396 (78%), Gaps = 3/396 (0%) Strand = Plus / Plus Query: 119 tgaagacagctggtcagacgaggatctgtgcagaaagggtgaggattggtatttgctttc 178 ||||||| |||||||||| |||||| ||||| ||| |||||||||||||| |||| Sbjct: 76 tgaagactgctggtcagatgaggattactgcaggaagaaggaggattggtatttagtttc 135 Query: 179 caaaacgcgcgcagagcgtgaggcttttgcttatgcagcgaaaactgggatggatgttgt 238 |||||| | | || || || ||| |||||| || || ||||| ||| |||| ||||| Sbjct: 136 caaaacactgtcggaacgagaagctcttgcttttggggcaaaaacagggctggacgttgt 195 Query: 239 agctattctaccatcattggtacttggccccttgatgcagccaacagtgaatgcgagcag 298 | || || || ||||| ||| |||| |||||||||||||| ||||| ||| |||||| Sbjct: 196 aactgtttgtccgtcattagtatttggacccttgatgcagcctacagtaaatttgagcag 255 Query: 299 taaaattctcctcaaatatctcaaaggagaacatgagactgtagaaaatagattctggaa 358 |||| |||| |||||| |||||| | | |||||||| |||||| | || | || Sbjct: 256 cgaaatgatccttaaatatttcaaag---atctcgagactgttgaaaatgtactcagtaa 312 Query: 359 tctagtggatgtccgtgatgttgccgatgctcttcttctggcatatgaaaatccagaggc 418 | | |||||| | ||||||||||| ||||||||||||||| | || ||||| ||||| || Sbjct: 313 tatggtggatattcgtgatgttgctgatgctcttcttctgacttacgaaaagccagaagc 372 Query: 419 atctggacggtacatctgcagtccagtacgaataaaagtttctgatgtcataaacattct 478 |||||||| |||||||||||| || ||||||| |||||||| | |||||||| || Sbjct: 373 gtctggacgatacatctgcagttcacatgcaataaaaatttctgatatgataaacatact 432 Query: 479 gaagaccttatatccaacatacacttatcccaaaaa 514 ||||||| | ||||| | ||| ||||||||||||| Sbjct: 433 gaagaccatgtatccgtcttacccttatcccaaaaa 468 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Plus Query: 549 tctgagaaacttcagaagctagggtggaccttca 582 ||||||||||| |||||||| |||||| |||||| Sbjct: 503 tctgagaaactgcagaagctggggtggcccttca 536
>gb|AY111471.1| Zea mays CL42025_1 mRNA sequence Length = 830 Score = 73.8 bits (37), Expect = 6e-10 Identities = 151/191 (79%) Strand = Plus / Minus Query: 75 gctgtgttcaacaatcctaactggcccaagggcaaagtatttactgaagacagctggtca 134 ||||||||||| |||||| ||||||| |||||| | | |||||||| || ||||||||| Sbjct: 779 gctgtgttcaataatcctgactggcctaagggcgaggcctttactgaggatagctggtca 720 Query: 135 gacgaggatctgtgcagaaagggtgaggattggtatttgctttccaaaacgcgcgcagag 194 || | ||| ||||| |||||| |||||||| ||||| ||||| ||||| Sbjct: 719 gatggggaatattgcagnnnnnntgaggaatggtatttcctttctaaaacattggcagaa 660 Query: 195 cgtgaggcttttgcttatgcagcgaaaactgggatggatgttgtagctattctaccatca 254 | ||||||||||||||||||||| ||||||||| | || ||||| ||||| |||||| Sbjct: 659 catgaggcttttgcttatgcagccaaaactgggctagacattgtaactatttgcccatca 600 Query: 255 ttggtacttgg 265 |||||| |||| Sbjct: 599 ttggtaattgg 589 Score = 61.9 bits (31), Expect = 2e-06 Identities = 115/143 (80%) Strand = Plus / Minus Query: 363 gtggatgtccgtgatgttgccgatgctcttcttctggcatatgaaaatccagaggcatct 422 |||||||| |||||||| || | ||| ||||| |||| || ||||||| ||||||| Sbjct: 491 gtggatgttcgtgatgtcgctggtgcccttctgttggcttacgaaaatctgcaggcatca 432 Query: 423 ggacggtacatctgcagtccagtacgaataaaagtttctgatgtcataaacattctgaag 482 ||||| ||| |||||||| || | ||||| ||| |||||| | ||||||| |||||| Sbjct: 431 ggacgatacctctgcagttcaccagcaataagagtctctgatattgtaaacatactgaag 372 Query: 483 accttatatccaacatacactta 505 ||| |||||||||||||||||| Sbjct: 371 accgaatatccaacatacactta 349
>gb|AC108762.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone OSJNBb0052C07, complete sequence Length = 154528 Score = 50.1 bits (25), Expect = 0.008 Identities = 41/45 (91%), Gaps = 1/45 (2%) Strand = Plus / Plus Query: 363 gtggatgtccgtgatgttgccgatgctcttcttctggcatatgaa 407 ||||||||||||||||| || |||||||| ||||| ||||||||| Sbjct: 24107 gtggatgtccgtgatgtcgctgatgctctacttct-gcatatgaa 24150 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 366 gatgtccgtgatgttgccgatgctcttcttctggcata 403 ||||||||||||||||| |||||| | ||||| ||||| Sbjct: 19396 gatgtccgtgatgttgctgatgctttacttctagcata 19433 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 361 tagtggatgtccgtgatgttgccgatgc 388 |||| |||||||||||||| |||||||| Sbjct: 11187 tagtcgatgtccgtgatgtggccgatgc 11214
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 546 agttctgagaaacttcagaagctagggtggaccttcaggcc 586 ||||| ||||| ||| |||||||||| |||||||||||||| Sbjct: 4891741 agttcagagaagcttgagaagctaggttggaccttcaggcc 4891701 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Minus Query: 189 gcagagcgtgaggcttttgcttatgcagcgaaaactgggatgga 232 ||||||||||||||||||| || || || |||||||||||||| Sbjct: 4892663 gcagagcgtgaggcttttgagtacgcggcaaaaactgggatgga 4892620 Score = 42.1 bits (21), Expect = 2.0 Identities = 72/89 (80%) Strand = Plus / Minus Query: 12 aatgtgttgaaggcttgcaacgaggcaaaagttaagcgagttgtcatagtgtcttcatgt 71 |||||||||| ||| || |||| |||||||| ||||||||||| | || |||||| | Sbjct: 4893235 aatgtgttgagagctagccacgaagcaaaagtgaagcgagttgtggtggtttcttcagtt 4893176 Query: 72 gctgctgtgttcaacaatcctaactggcc 100 | || |||||||| ||||| |||||||| Sbjct: 4893175 gtcgcagtgttcaataatcccaactggcc 4893147 Score = 42.1 bits (21), Expect = 2.0 Identities = 63/77 (81%) Strand = Plus / Minus Query: 364 tggatgtccgtgatgttgccgatgctcttcttctggcatatgaaaatccagaggcatctg 423 ||||||| || ||||||||||||||| ||||| | | |||||||| ||| || ||||| Sbjct: 4892036 tggatgttcgcgatgttgccgatgctattcttttagtctatgaaaactcagggggatctg 4891977 Query: 424 gacggtacatctgcagt 440 ||| ||||| |||||| Sbjct: 4891976 aacgatacatatgcagt 4891960
>dbj|AP004646.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1122_A12 Length = 149011 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 546 agttctgagaaacttcagaagctagggtggaccttcaggcc 586 ||||| ||||| ||| |||||||||| |||||||||||||| Sbjct: 50995 agttcagagaagcttgagaagctaggttggaccttcaggcc 50955 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Minus Query: 189 gcagagcgtgaggcttttgcttatgcagcgaaaactgggatgga 232 ||||||||||||||||||| || || || |||||||||||||| Sbjct: 51917 gcagagcgtgaggcttttgagtacgcggcaaaaactgggatgga 51874 Score = 42.1 bits (21), Expect = 2.0 Identities = 72/89 (80%) Strand = Plus / Minus Query: 12 aatgtgttgaaggcttgcaacgaggcaaaagttaagcgagttgtcatagtgtcttcatgt 71 |||||||||| ||| || |||| |||||||| ||||||||||| | || |||||| | Sbjct: 52489 aatgtgttgagagctagccacgaagcaaaagtgaagcgagttgtggtggtttcttcagtt 52430 Query: 72 gctgctgtgttcaacaatcctaactggcc 100 | || |||||||| ||||| |||||||| Sbjct: 52429 gtcgcagtgttcaataatcccaactggcc 52401 Score = 42.1 bits (21), Expect = 2.0 Identities = 63/77 (81%) Strand = Plus / Minus Query: 364 tggatgtccgtgatgttgccgatgctcttcttctggcatatgaaaatccagaggcatctg 423 ||||||| || ||||||||||||||| ||||| | | |||||||| ||| || ||||| Sbjct: 51290 tggatgttcgcgatgttgccgatgctattcttttagtctatgaaaactcagggggatctg 51231 Query: 424 gacggtacatctgcagt 440 ||| ||||| |||||| Sbjct: 51230 aacgatacatatgcagt 51214
>dbj|AP005440.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0056D04 Length = 158118 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 546 agttctgagaaacttcagaagctagggtggaccttcaggcc 586 ||||| ||||| ||| |||||||||| |||||||||||||| Sbjct: 96535 agttcagagaagcttgagaagctaggttggaccttcaggcc 96495 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Minus Query: 189 gcagagcgtgaggcttttgcttatgcagcgaaaactgggatgga 232 ||||||||||||||||||| || || || |||||||||||||| Sbjct: 97457 gcagagcgtgaggcttttgagtacgcggcaaaaactgggatgga 97414 Score = 42.1 bits (21), Expect = 2.0 Identities = 72/89 (80%) Strand = Plus / Minus Query: 12 aatgtgttgaaggcttgcaacgaggcaaaagttaagcgagttgtcatagtgtcttcatgt 71 |||||||||| ||| || |||| |||||||| ||||||||||| | || |||||| | Sbjct: 98029 aatgtgttgagagctagccacgaagcaaaagtgaagcgagttgtggtggtttcttcagtt 97970 Query: 72 gctgctgtgttcaacaatcctaactggcc 100 | || |||||||| ||||| |||||||| Sbjct: 97969 gtcgcagtgttcaataatcccaactggcc 97941 Score = 42.1 bits (21), Expect = 2.0 Identities = 63/77 (81%) Strand = Plus / Minus Query: 364 tggatgtccgtgatgttgccgatgctcttcttctggcatatgaaaatccagaggcatctg 423 ||||||| || ||||||||||||||| ||||| | | |||||||| ||| || ||||| Sbjct: 96830 tggatgttcgcgatgttgccgatgctattcttttagtctatgaaaactcagggggatctg 96771 Query: 424 gacggtacatctgcagt 440 ||| ||||| |||||| Sbjct: 96770 aacgatacatatgcagt 96754
>dbj|AK073641.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033052J24, full insert sequence Length = 1232 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 363 gtggatgtccgtgatgttgccgatgctcttctt 395 ||||||||| | ||||||||||||||||||||| Sbjct: 706 gtggatgtcagggatgttgccgatgctcttctt 738 Score = 40.1 bits (20), Expect = 8.1 Identities = 44/52 (84%) Strand = Plus / Plus Query: 249 ccatcattggtacttggccccttgatgcagccaacagtgaatgcgagcagta 300 ||||| ||||| |||| || ||| |||| ||||| |||||||||||||||| Sbjct: 595 ccatcgttggtgattggacctttgctgcaaccaactgtgaatgcgagcagta 646
>dbj|AK063958.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-G03, full insert sequence Length = 1737 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 363 gtggatgtccgtgatgttgccgatgctcttctt 395 ||||||||| | ||||||||||||||||||||| Sbjct: 1153 gtggatgtcagggatgttgccgatgctcttctt 1185 Score = 40.1 bits (20), Expect = 8.1 Identities = 44/52 (84%) Strand = Plus / Plus Query: 249 ccatcattggtacttggccccttgatgcagccaacagtgaatgcgagcagta 300 ||||| ||||| |||| || ||| |||| ||||| |||||||||||||||| Sbjct: 1042 ccatcgttggtgattggacctttgctgcaaccaactgtgaatgcgagcagta 1093
>ref|XM_480400.1| Oryza sativa (japonica cultivar-group), mRNA Length = 690 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Plus Query: 189 gcagagcgtgaggcttttgcttatgcagcgaaaactgggatgga 232 ||||||||||||||||||| || || || |||||||||||||| Sbjct: 547 gcagagcgtgaggcttttgagtacgcggcaaaaactgggatgga 590 Score = 42.1 bits (21), Expect = 2.0 Identities = 72/89 (80%) Strand = Plus / Plus Query: 12 aatgtgttgaaggcttgcaacgaggcaaaagttaagcgagttgtcatagtgtcttcatgt 71 |||||||||| ||| || |||| |||||||| ||||||||||| | || |||||| | Sbjct: 364 aatgtgttgagagctagccacgaagcaaaagtgaagcgagttgtggtggtttcttcagtt 423 Query: 72 gctgctgtgttcaacaatcctaactggcc 100 | || |||||||| ||||| |||||||| Sbjct: 424 gtcgcagtgttcaataatcccaactggcc 452
>emb|BX883042.1| Rattus norvegicus chromosome 20, major histocompatibility complex, assembled from 40 BACs, strain Brown Norway (BN/ssNHsd), RT1n haplotype; segment 1/11 Length = 348780 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 405 gaaaatccagaggcatctggacg 427 ||||||||||||||||||||||| Sbjct: 73525 gaaaatccagaggcatctggacg 73547
>dbj|AK062287.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-E03, full insert sequence Length = 1272 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 366 gatgtccgtgatgttgccgatgctcttcttctggcata 403 ||||||||||||||||| |||||| | ||||| ||||| Sbjct: 771 gatgtccgtgatgttgctgatgctttacttctagcata 808
>gb|AC136221.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0077J17, complete sequence Length = 141598 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 491 tccaacatacacttatcccaaaaac 515 ||||| ||||||||||||||||||| Sbjct: 103800 tccaaaatacacttatcccaaaaac 103824
>gb|AC118710.7| Mus musculus chromosome 15, clone RP24-121C9, complete sequence Length = 175437 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 325 gagaacatgagactgtagaaa 345 ||||||||||||||||||||| Sbjct: 53619 gagaacatgagactgtagaaa 53599
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 491 tccaacatacacttatcccaaaaac 515 ||||| ||||||||||||||||||| Sbjct: 16463363 tccaaaatacacttatcccaaaaac 16463387
>gb|AC087902.43| Mus musculus strain C57BL/6J chromosome 15 clone rp23-343o3, complete sequence Length = 220173 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 gagaacatgagactgtagaaa 345 ||||||||||||||||||||| Sbjct: 32337 gagaacatgagactgtagaaa 32357
>gb|AC011235.4| Homo sapiens BAC clone RP11-295A19 from 2, complete sequence Length = 184042 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 545 gagttctgagaaacttcagaa 565 ||||||||||||||||||||| Sbjct: 162379 gagttctgagaaacttcagaa 162359
>gb|AC167466.6| Mus musculus chromosome 7, clone RP24-220N8, complete sequence Length = 163721 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 494 aacatacacttatcccaaaa 513 |||||||||||||||||||| Sbjct: 121940 aacatacacttatcccaaaa 121959
>ref|NM_196521.1| Oryza sativa (japonica cultivar-group) putative polyprotein (OSJNBa0006I13.8), mRNA Length = 1305 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 524 ggtggaagaaggtaaagtta 543 |||||||||||||||||||| Sbjct: 444 ggtggaagaaggtaaagtta 463
>gb|AC110214.7| Mus musculus chromosome 8, clone RP24-485L5, complete sequence Length = 213387 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 571 ggtggaccttcaggcctgta 590 |||||||||||||||||||| Sbjct: 169561 ggtggaccttcaggcctgta 169542
>gb|AC127189.4| Rattus norvegicus 1 BAC CH230-266M16 (Children's Hospital Oakland Research Institute) complete sequence Length = 222423 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 aaaatccagaggcatctgga 425 |||||||||||||||||||| Sbjct: 45042 aaaatccagaggcatctgga 45023
>gb|AC161767.4| Pan troglodytes BAC clone CH251-365K8 from chromosome 7, complete sequence Length = 148248 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 521 ggaggtggaagaaggtaaagttat 544 |||||||||| ||||||||||||| Sbjct: 26431 ggaggtggaaaaaggtaaagttat 26454
>gb|AC161280.2| Pan troglodytes BAC clone CH251-392H4 from chromosome 7, complete sequence Length = 190939 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 521 ggaggtggaagaaggtaaagttat 544 |||||||||| ||||||||||||| Sbjct: 170607 ggaggtggaaaaaggtaaagttat 170630
>gb|AC123876.5| Mus musculus BAC clone RP23-270P19 from chromosome 3, complete sequence Length = 203639 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 301 aaattctcctcaaatatctcaaag 324 |||||| ||||||||||||||||| Sbjct: 68983 aaattcccctcaaatatctcaaag 69006
>gb|AC124672.9| Mus musculus chromosome 1, clone RP23-328G14, complete sequence Length = 249008 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 aagggtgaggattggtattt 172 |||||||||||||||||||| Sbjct: 185876 aagggtgaggattggtattt 185895
>gb|AC110554.10| Mus musculus chromosome 8, clone RP23-249H16, complete sequence Length = 170361 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 571 ggtggaccttcaggcctgta 590 |||||||||||||||||||| Sbjct: 105644 ggtggaccttcaggcctgta 105663
>gb|AC161413.5| Mus musculus chromosome 19, clone RP23-106D17, complete sequence Length = 215356 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 494 aacatacacttatcccaaaa 513 |||||||||||||||||||| Sbjct: 139374 aacatacacttatcccaaaa 139393
>ref|NM_001007895.1| Xenopus tropicalis grhpr protein (grhpr), mRNA Length = 1306 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 cttcatgtgctgctgtgttc 83 |||||||||||||||||||| Sbjct: 68 cttcatgtgctgctgtgttc 49
>gb|BC080331.1| Xenopus tropicalis grhpr protein, mRNA (cDNA clone MGC:79548 IMAGE:6978272), complete cds Length = 1306 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 cttcatgtgctgctgtgttc 83 |||||||||||||||||||| Sbjct: 68 cttcatgtgctgctgtgttc 49
>gb|AC104164.2| Homo sapiens chromosome 3 clone RP11-641C17, complete sequence Length = 197483 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 agttctgagaaacttcagaa 565 |||||||||||||||||||| Sbjct: 143638 agttctgagaaacttcagaa 143657
>gb|AC118231.9| Mus musculus chromosome 5, clone RP23-462J24, complete sequence Length = 186083 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 329 acatgagactgtagaaaata 348 |||||||||||||||||||| Sbjct: 57269 acatgagactgtagaaaata 57250
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 aggcttgcaacgaggcaaaa 41 |||||||||||||||||||| Sbjct: 6219595 aggcttgcaacgaggcaaaa 6219576 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 aggcttgcaacgaggcaaaa 41 |||||||||||||||||||| Sbjct: 4931132 aggcttgcaacgaggcaaaa 4931151 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 aggcttgcaacgaggcaaaa 41 |||||||||||||||||||| Sbjct: 3892006 aggcttgcaacgaggcaaaa 3892025 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 aggcttgcaacgaggcaaaa 41 |||||||||||||||||||| Sbjct: 2169730 aggcttgcaacgaggcaaaa 2169749 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 aggcttgcaacgaggcaaaa 41 |||||||||||||||||||| Sbjct: 1973865 aggcttgcaacgaggcaaaa 1973884 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 aggcttgcaacgaggcaaaa 41 |||||||||||||||||||| Sbjct: 1550875 aggcttgcaacgaggcaaaa 1550856 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 aggcttgcaacgaggcaaaa 41 |||||||||||||||||||| Sbjct: 600768 aggcttgcaacgaggcaaaa 600787
>ref|NM_001027182.1| Caenorhabditis elegans T23B7.2 (T23B7.2) mRNA, complete cds Length = 507 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 tgaggcttttgcttatgcag 216 |||||||||||||||||||| Sbjct: 224 tgaggcttttgcttatgcag 205
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 524 ggtggaagaaggtaaagtta 543 |||||||||||||||||||| Sbjct: 14219449 ggtggaagaaggtaaagtta 14219468
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 tgggatggatgttgtagcta 243 |||||||||||||||||||| Sbjct: 33064588 tgggatggatgttgtagcta 33064607
>gb|AC093381.5| Homo sapiens BAC clone RP11-436J10 from 2, complete sequence Length = 121777 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 480 aagaccttatatccaacata 499 |||||||||||||||||||| Sbjct: 44517 aagaccttatatccaacata 44536
>dbj|AP003368.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1100D10 Length = 152997 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 tgggatggatgttgtagcta 243 |||||||||||||||||||| Sbjct: 1498 tgggatggatgttgtagcta 1517
>gb|AC027658.1| Oryza sativa (japonica cultivar-group) BAC nbxb0006I13 chromosome 10, complete sequence Length = 142737 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 524 ggtggaagaaggtaaagtta 543 |||||||||||||||||||| Sbjct: 91522 ggtggaagaaggtaaagtta 91541
>dbj|AP003224.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0010B10 Length = 155263 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 tgggatggatgttgtagcta 243 |||||||||||||||||||| Sbjct: 130816 tgggatggatgttgtagcta 130835
>gb|AC003991.1|AC003991 Human BAC clone CTB-167B5 from 7q21, complete sequence Length = 118313 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 521 ggaggtggaagaaggtaaagttat 544 |||||||||| ||||||||||||| Sbjct: 83705 ggaggtggaaaaaggtaaagttat 83728
>dbj|AK099316.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023145C18, full insert sequence Length = 1334 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 524 ggtggaagaaggtaaagtta 543 |||||||||||||||||||| Sbjct: 525 ggtggaagaaggtaaagtta 544
>dbj|AK064344.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-H09, full insert sequence Length = 1355 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 524 ggtggaagaaggtaaagtta 543 |||||||||||||||||||| Sbjct: 540 ggtggaagaaggtaaagtta 559
>emb|CR760190.2| Xenopus tropicalis finished cDNA, clone TNeu118d21 Length = 1291 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 cttcatgtgctgctgtgttc 83 |||||||||||||||||||| Sbjct: 65 cttcatgtgctgctgtgttc 46
>gb|AC091332.8| Mus musculus chromosome 17, clone RP23-12K1, complete sequence Length = 216370 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 cttcatgtgctgctgtgttc 83 |||||||||||||||||||| Sbjct: 22743 cttcatgtgctgctgtgttc 22724
>gb|U66722.1|HSU66722 Human chromosome 3p14.2 fragile site FRA3B sequence Length = 110434 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 546 agttctgagaaacttcagaa 565 |||||||||||||||||||| Sbjct: 48192 agttctgagaaacttcagaa 48173
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 524 ggtggaagaaggtaaagtta 543 |||||||||||||||||||| Sbjct: 14227691 ggtggaagaaggtaaagtta 14227710 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,557,611 Number of Sequences: 3902068 Number of extensions: 5557611 Number of successful extensions: 109443 Number of sequences better than 10.0: 51 Number of HSP's better than 10.0 without gapping: 52 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 109111 Number of HSP's gapped (non-prelim): 317 length of query: 593 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 570 effective length of database: 17,143,297,704 effective search space: 9771679691280 effective search space used: 9771679691280 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
