ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags4i20 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 928 bits (468), Expect = 0.0 Identities = 482/489 (98%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117815 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 117756 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117755 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 117696 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117695 gggggggcccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 117636 Query: 181 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117635 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 117576 Query: 241 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117575 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 117516 Query: 301 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117515 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 117456 Query: 361 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117455 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 117396 Query: 421 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117395 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 117336 Query: 481 gtcggctct 489 ||||||||| Sbjct: 117335 gtcggctct 117327 Score = 928 bits (468), Expect = 0.0 Identities = 482/489 (98%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97341 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 97400 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97401 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 97460 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97461 gggggggcccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 97520 Query: 181 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97521 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 97580 Query: 241 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97581 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 97640 Query: 301 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97641 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 97700 Query: 361 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97701 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 97760 Query: 421 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97761 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 97820 Query: 481 gtcggctct 489 ||||||||| Sbjct: 97821 gtcggctct 97829
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 928 bits (468), Expect = 0.0 Identities = 482/489 (98%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117815 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 117756 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117755 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 117696 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117695 gggggggcccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 117636 Query: 181 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117635 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 117576 Query: 241 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117575 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 117516 Query: 301 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117515 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 117456 Query: 361 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117455 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 117396 Query: 421 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117395 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 117336 Query: 481 gtcggctct 489 ||||||||| Sbjct: 117335 gtcggctct 117327 Score = 928 bits (468), Expect = 0.0 Identities = 482/489 (98%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97341 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 97400 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97401 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 97460 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97461 gggggggcccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 97520 Query: 181 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97521 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 97580 Query: 241 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97581 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 97640 Query: 301 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97641 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 97700 Query: 361 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97701 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 97760 Query: 421 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97761 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 97820 Query: 481 gtcggctct 489 ||||||||| Sbjct: 97821 gtcggctct 97829
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 928 bits (468), Expect = 0.0 Identities = 482/489 (98%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117764 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 117705 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117704 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 117645 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117644 gggggggcccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 117585 Query: 181 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117584 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 117525 Query: 241 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117524 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 117465 Query: 301 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117464 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 117405 Query: 361 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117404 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 117345 Query: 421 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117344 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 117285 Query: 481 gtcggctct 489 ||||||||| Sbjct: 117284 gtcggctct 117276 Score = 928 bits (468), Expect = 0.0 Identities = 482/489 (98%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97286 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 97345 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97346 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 97405 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97406 gggggggcccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 97465 Query: 181 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97466 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 97525 Query: 241 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97526 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 97585 Query: 301 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97586 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 97645 Query: 361 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97646 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 97705 Query: 421 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97706 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 97765 Query: 481 gtcggctct 489 ||||||||| Sbjct: 97766 gtcggctct 97774
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 928 bits (468), Expect = 0.0 Identities = 482/489 (98%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509919 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 31509978 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509979 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 31510038 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31510039 gggggggcccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 31510098 Query: 181 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31510099 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 31510158 Query: 241 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31510159 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 31510218 Query: 301 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31510219 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 31510278 Query: 361 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31510279 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 31510338 Query: 421 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31510339 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 31510398 Query: 481 gtcggctct 489 ||||||||| Sbjct: 31510399 gtcggctct 31510407 Score = 500 bits (252), Expect = e-138 Identities = 252/252 (100%) Strand = Plus / Plus Query: 238 tcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcg 297 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31511288 tcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcg 31511347 Query: 298 agtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtc 357 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31511348 agtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtc 31511407 Query: 358 ggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttact 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31511408 ggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttact 31511467 Query: 418 ctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctc 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31511468 ctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctc 31511527 Query: 478 gatgtcggctct 489 |||||||||||| Sbjct: 31511528 gatgtcggctct 31511539 Score = 178 bits (90), Expect = 1e-41 Identities = 142/158 (89%), Gaps = 1/158 (0%) Strand = Plus / Minus Query: 254 aggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaag 313 ||||||||||||||||||| |||| | | |||||||||||||| ||| ||||||||||| Sbjct: 4318151 aggcgtgcaaaggtttccttgggcta-atggacattggtcctcaagtacaaaggcagaaa 4318093 Query: 314 ggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccga 373 ||||||||||||||||||||| | |||||||| ||||||||||||||||| ||||||||| Sbjct: 4318092 ggagcttgactgcaagactcatctgtcgagcaaagacgaaagtcggccttggtgatccga 4318033 Query: 374 cggtgccgagtggaagggccgtcgctcaacggataaaa 411 || ||| |||||||| ||| ||||||||| |||||||| Sbjct: 4318032 cgatgctgagtggaaaggctgtcgctcaatggataaaa 4317995 Score = 60.0 bits (30), Expect = 7e-06 Identities = 30/30 (100%) Strand = Plus / Minus Query: 11 ggactacctgcacctggacagaaagaccct 40 |||||||||||||||||||||||||||||| Sbjct: 3507532 ggactacctgcacctggacagaaagaccct 3507503 Score = 44.1 bits (22), Expect = 0.42 Identities = 52/62 (83%) Strand = Plus / Plus Query: 417 tctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacct 476 |||||| |||||| | |||||||| | |||| | |||||| || ||||| |||||||||| Sbjct: 7254590 tctaggaataacaaggtgatcttctctaagaattcacatctacaggaagttttggcacct 7254649 Query: 477 cg 478 || Sbjct: 7254650 cg 7254651
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 928 bits (468), Expect = 0.0 Identities = 482/489 (98%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82677 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 82618 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82617 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 82558 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82557 gggggggcccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 82498 Query: 181 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82497 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 82438 Query: 241 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82437 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 82378 Query: 301 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82377 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 82318 Query: 361 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82317 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 82258 Query: 421 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82257 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 82198 Query: 481 gtcggctct 489 ||||||||| Sbjct: 82197 gtcggctct 82189 Score = 500 bits (252), Expect = e-138 Identities = 252/252 (100%) Strand = Plus / Minus Query: 238 tcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcg 297 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 81308 tcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcg 81249 Query: 298 agtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtc 357 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 81248 agtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtc 81189 Query: 358 ggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttact 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 81188 ggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttact 81129 Query: 418 ctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctc 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 81128 ctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctc 81069 Query: 478 gatgtcggctct 489 |||||||||||| Sbjct: 81068 gatgtcggctct 81057
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 928 bits (468), Expect = 0.0 Identities = 482/489 (98%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16108 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 16167 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16168 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 16227 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16228 gggggggcccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 16287 Query: 181 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16288 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 16347 Query: 241 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16348 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 16407 Query: 301 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16408 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 16467 Query: 361 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16468 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 16527 Query: 421 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16528 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 16587 Query: 481 gtcggctct 489 ||||||||| Sbjct: 16588 gtcggctct 16596 Score = 920 bits (464), Expect = 0.0 Identities = 481/489 (98%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124382 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 124441 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124442 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 124501 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124502 gggggggcccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 124561 Query: 181 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124562 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 124621 Query: 241 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124622 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 124681 Query: 301 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 360 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 124682 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagatgaaagtcggc 124741 Query: 361 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124742 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 124801 Query: 421 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124802 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 124861 Query: 481 gtcggctct 489 ||||||||| Sbjct: 124862 gtcggctct 124870
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 928 bits (468), Expect = 0.0 Identities = 482/489 (98%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142916 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 142975 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142976 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 143035 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 143036 gggggggcccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 143095 Query: 181 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 143096 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 143155 Query: 241 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 143156 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 143215 Query: 301 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 143216 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 143275 Query: 361 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 143276 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 143335 Query: 421 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 143336 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 143395 Query: 481 gtcggctct 489 ||||||||| Sbjct: 143396 gtcggctct 143404
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 928 bits (468), Expect = 0.0 Identities = 482/489 (98%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9270268 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 9270327 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9270328 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 9270387 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9270388 gggggggcccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 9270447 Query: 181 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9270448 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 9270507 Query: 241 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9270508 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 9270567 Query: 301 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9270568 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 9270627 Query: 361 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9270628 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 9270687 Query: 421 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9270688 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 9270747 Query: 481 gtcggctct 489 ||||||||| Sbjct: 9270748 gtcggctct 9270756 Score = 928 bits (468), Expect = 0.0 Identities = 482/489 (98%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9058182 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 9058241 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9058242 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 9058301 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9058302 gggggggcccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 9058361 Query: 181 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9058362 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 9058421 Query: 241 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9058422 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 9058481 Query: 301 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9058482 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 9058541 Query: 361 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9058542 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 9058601 Query: 421 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9058602 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 9058661 Query: 481 gtcggctct 489 ||||||||| Sbjct: 9058662 gtcggctct 9058670 Score = 920 bits (464), Expect = 0.0 Identities = 481/489 (98%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9229768 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 9229827 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9229828 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 9229887 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9229888 gggggggcccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 9229947 Query: 181 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9229948 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 9230007 Query: 241 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9230008 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 9230067 Query: 301 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 360 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 9230068 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagatgaaagtcggc 9230127 Query: 361 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9230128 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 9230187 Query: 421 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9230188 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 9230247 Query: 481 gtcggctct 489 ||||||||| Sbjct: 9230248 gtcggctct 9230256 Score = 920 bits (464), Expect = 0.0 Identities = 481/489 (98%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9166356 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 9166415 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9166416 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 9166475 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9166476 gggggggcccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 9166535 Query: 181 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9166536 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 9166595 Query: 241 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9166596 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 9166655 Query: 301 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 360 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 9166656 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagatgaaagtcggc 9166715 Query: 361 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9166716 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 9166775 Query: 421 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9166776 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 9166835 Query: 481 gtcggctct 489 ||||||||| Sbjct: 9166836 gtcggctct 9166844 Score = 391 bits (197), Expect = e-105 Identities = 214/222 (96%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 23632928 gtgaagatgcggactacctgcacctagacagaaagaccctatgaagctttactgttccct 23632869 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23632868 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 23632809 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23632808 gggggggcccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 23632749 Query: 181 tcagacccgcgggccaagggacagtctcaggtagacagtttc 222 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 23632748 tcagacccgcgggccaagggacagtctcaggtagacagtttc 23632707
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 928 bits (468), Expect = 0.0 Identities = 482/489 (98%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31600435 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 31600494 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31600495 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 31600554 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31600555 gggggggcccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 31600614 Query: 181 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31600615 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 31600674 Query: 241 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31600675 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 31600734 Query: 301 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31600735 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 31600794 Query: 361 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31600795 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 31600854 Query: 421 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31600855 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 31600914 Query: 481 gtcggctct 489 ||||||||| Sbjct: 31600915 gtcggctct 31600923 Score = 500 bits (252), Expect = e-138 Identities = 252/252 (100%) Strand = Plus / Plus Query: 238 tcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcg 297 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31601804 tcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcg 31601863 Query: 298 agtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtc 357 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31601864 agtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtc 31601923 Query: 358 ggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttact 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31601924 ggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttact 31601983 Query: 418 ctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctc 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31601984 ctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctc 31602043 Query: 478 gatgtcggctct 489 |||||||||||| Sbjct: 31602044 gatgtcggctct 31602055 Score = 178 bits (90), Expect = 1e-41 Identities = 142/158 (89%), Gaps = 1/158 (0%) Strand = Plus / Minus Query: 254 aggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaag 313 ||||||||||||||||||| |||| | | |||||||||||||| ||| ||||||||||| Sbjct: 4318266 aggcgtgcaaaggtttccttgggcta-atggacattggtcctcaagtacaaaggcagaaa 4318208 Query: 314 ggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccga 373 ||||||||||||||||||||| | |||||||| ||||||||||||||||| ||||||||| Sbjct: 4318207 ggagcttgactgcaagactcatctgtcgagcaaagacgaaagtcggccttggtgatccga 4318148 Query: 374 cggtgccgagtggaagggccgtcgctcaacggataaaa 411 || ||| |||||||| ||| ||||||||| |||||||| Sbjct: 4318147 cgatgctgagtggaaaggctgtcgctcaatggataaaa 4318110 Score = 60.0 bits (30), Expect = 7e-06 Identities = 30/30 (100%) Strand = Plus / Minus Query: 11 ggactacctgcacctggacagaaagaccct 40 |||||||||||||||||||||||||||||| Sbjct: 3507643 ggactacctgcacctggacagaaagaccct 3507614 Score = 44.1 bits (22), Expect = 0.42 Identities = 52/62 (83%) Strand = Plus / Plus Query: 417 tctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacct 476 |||||| |||||| | |||||||| | |||| | |||||| || ||||| |||||||||| Sbjct: 7252485 tctaggaataacaaggtgatcttctctaagaattcacatctacaggaagttttggcacct 7252544 Query: 477 cg 478 || Sbjct: 7252545 cg 7252546
>dbj|AK119524.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E06, full insert sequence Length = 1809 Score = 928 bits (468), Expect = 0.0 Identities = 482/489 (98%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 774 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 833 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 834 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 893 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 894 gggggggcccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 953 Query: 181 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 954 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 1013 Query: 241 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1014 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 1073 Query: 301 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1074 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 1133 Query: 361 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1134 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 1193 Query: 421 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1194 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 1253 Query: 481 gtcggctct 489 ||||||||| Sbjct: 1254 gtcggctct 1262
>dbj|AK108459.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-143-D06, full insert sequence Length = 1449 Score = 928 bits (468), Expect = 0.0 Identities = 482/489 (98%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 68 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 69 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 128 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129 gggggggcccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 188 Query: 181 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 189 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 248 Query: 241 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 249 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 308 Query: 301 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 309 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 368 Query: 361 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 369 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 428 Query: 421 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 429 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 488 Query: 481 gtcggctct 489 ||||||||| Sbjct: 489 gtcggctct 497
>dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E02, full insert sequence Length = 2146 Score = 928 bits (468), Expect = 0.0 Identities = 482/489 (98%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1190 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 1249 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1250 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 1309 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1310 gggggggcccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 1369 Query: 181 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1370 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 1429 Query: 241 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1430 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 1489 Query: 301 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1490 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 1549 Query: 361 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1550 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 1609 Query: 421 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1610 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 1669 Query: 481 gtcggctct 489 ||||||||| Sbjct: 1670 gtcggctct 1678
>dbj|AK060344.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-E03, full insert sequence Length = 1200 Score = 928 bits (468), Expect = 0.0 Identities = 482/489 (98%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 286 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 345 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 346 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 405 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 406 gggggggcccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 465 Query: 181 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 466 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 525 Query: 241 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 526 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 585 Query: 301 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 586 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 645 Query: 361 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 646 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 705 Query: 421 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 706 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 765 Query: 481 gtcggctct 489 ||||||||| Sbjct: 766 gtcggctct 774
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 928 bits (468), Expect = 0.0 Identities = 482/489 (98%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117758 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 117699 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117698 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 117639 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117638 gggggggcccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 117579 Query: 181 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117578 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 117519 Query: 241 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117518 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 117459 Query: 301 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117458 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 117399 Query: 361 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117398 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 117339 Query: 421 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117338 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 117279 Query: 481 gtcggctct 489 ||||||||| Sbjct: 117278 gtcggctct 117270 Score = 928 bits (468), Expect = 0.0 Identities = 482/489 (98%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97281 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 97340 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97341 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 97400 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97401 gggggggcccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 97460 Query: 181 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97461 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 97520 Query: 241 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97521 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 97580 Query: 301 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97581 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 97640 Query: 361 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97641 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 97700 Query: 421 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97701 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 97760 Query: 481 gtcggctct 489 ||||||||| Sbjct: 97761 gtcggctct 97769
>gb|U49840.1|OSU49840 Oryza sativa subsp. indica large ribosomal RNA gene, chloroplast gene encoding chloroplast rRNA, partial sequence Length = 1130 Score = 928 bits (468), Expect = 0.0 Identities = 482/489 (98%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 423 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 424 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 483 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 484 gggggggcccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 543 Query: 181 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 544 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 603 Query: 241 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 604 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 663 Query: 301 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 664 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 723 Query: 361 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 724 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 783 Query: 421 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 784 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 843 Query: 481 gtcggctct 489 ||||||||| Sbjct: 844 gtcggctct 852
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 920 bits (464), Expect = 0.0 Identities = 481/489 (98%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 42774 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 42715 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 42714 gggattggctttgggcttttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 42655 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 42654 gggggggcccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 42595 Query: 181 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 42594 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 42535 Query: 241 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 42534 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 42475 Query: 301 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 42474 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 42415 Query: 361 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 42414 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 42355 Query: 421 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 42354 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 42295 Query: 481 gtcggctct 489 ||||||||| Sbjct: 42294 gtcggctct 42286 Score = 920 bits (464), Expect = 0.0 Identities = 481/489 (98%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22343 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 22402 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22403 gggattggctttgggcttttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 22462 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22463 gggggggcccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 22522 Query: 181 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22523 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 22582 Query: 241 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22583 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 22642 Query: 301 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22643 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 22702 Query: 361 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22703 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 22762 Query: 421 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22763 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 22822 Query: 481 gtcggctct 489 ||||||||| Sbjct: 22823 gtcggctct 22831
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 920 bits (464), Expect = 0.0 Identities = 481/489 (98%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121614 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 121555 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121554 gggattggctttgggcttttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 121495 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121494 gggggggcccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 121435 Query: 181 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121434 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 121375 Query: 241 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121374 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 121315 Query: 301 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121314 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 121255 Query: 361 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121254 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 121195 Query: 421 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121194 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 121135 Query: 481 gtcggctct 489 ||||||||| Sbjct: 121134 gtcggctct 121126 Score = 920 bits (464), Expect = 0.0 Identities = 481/489 (98%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101223 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 101282 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101283 gggattggctttgggcttttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 101342 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101343 gggggggcccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 101402 Query: 181 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101403 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 101462 Query: 241 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101463 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 101522 Query: 301 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101523 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 101582 Query: 361 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101583 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 101642 Query: 421 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101643 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 101702 Query: 481 gtcggctct 489 ||||||||| Sbjct: 101703 gtcggctct 101711
>dbj|AK059717.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-G05, full insert sequence Length = 1555 Score = 920 bits (464), Expect = 0.0 Identities = 481/489 (98%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 69 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 70 gggattggctttgggcctttcctgcgcagcttaggtgggaggcgaagaaggcccccttcc 129 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130 gggggggcccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 189 Query: 181 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 190 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 249 Query: 241 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 250 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 309 Query: 301 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 310 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 369 Query: 361 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 370 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 429 Query: 421 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 430 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 489 Query: 481 gtcggctct 489 ||||||||| Sbjct: 490 gtcggctct 498
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 920 bits (464), Expect = 0.0 Identities = 481/489 (98%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122331 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 122272 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122271 gggattggctttgggcttttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 122212 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122211 gggggggcccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 122152 Query: 181 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122151 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 122092 Query: 241 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122091 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 122032 Query: 301 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122031 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 121972 Query: 361 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121971 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 121912 Query: 421 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121911 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 121852 Query: 481 gtcggctct 489 ||||||||| Sbjct: 121851 gtcggctct 121843 Score = 920 bits (464), Expect = 0.0 Identities = 481/489 (98%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101900 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 101959 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101960 gggattggctttgggcttttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 102019 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102020 gggggggcccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 102079 Query: 181 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102080 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 102139 Query: 241 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102140 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 102199 Query: 301 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102200 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 102259 Query: 361 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102260 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 102319 Query: 421 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102320 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 102379 Query: 481 gtcggctct 489 ||||||||| Sbjct: 102380 gtcggctct 102388
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 920 bits (464), Expect = 0.0 Identities = 481/489 (98%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 117950 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgtttcct 117891 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117890 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 117831 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117830 gggggggcccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 117771 Query: 181 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117770 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 117711 Query: 241 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117710 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 117651 Query: 301 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117650 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 117591 Query: 361 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117590 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 117531 Query: 421 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117530 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 117471 Query: 481 gtcggctct 489 ||||||||| Sbjct: 117470 gtcggctct 117462 Score = 920 bits (464), Expect = 0.0 Identities = 481/489 (98%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 96944 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgtttcct 97003 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97004 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 97063 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97064 gggggggcccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 97123 Query: 181 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97124 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 97183 Query: 241 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97184 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 97243 Query: 301 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97244 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 97303 Query: 361 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97304 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 97363 Query: 421 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97364 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 97423 Query: 481 gtcggctct 489 ||||||||| Sbjct: 97424 gtcggctct 97432
>dbj|AK059370.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-E12, full insert sequence Length = 1741 Score = 918 bits (463), Expect = 0.0 Identities = 477/484 (98%) Strand = Plus / Plus Query: 6 gatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccctgggat 65 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccctgggat 60 Query: 66 tggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttccnnnnn 125 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttccggggg 120 Query: 126 nncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtgtcaga 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ggcccgagccatcagtgagataccactctggaagagctcggattctaaccttgtgtcaga 180 Query: 186 cccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaa 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaa 240 Query: 246 ggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaa 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaa 300 Query: 306 ggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggccttag 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggccttag 360 Query: 366 tgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactctagggat 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 tgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactctagggat 420 Query: 426 aacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgatgtcgg 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 aacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgatgtcgg 480 Query: 486 ctct 489 |||| Sbjct: 481 ctct 484
>dbj|AK061169.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-B02, full insert sequence Length = 1006 Score = 914 bits (461), Expect = 0.0 Identities = 482/490 (98%), Gaps = 1/490 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 49 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 108 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 168 Query: 121 nnnnnnn-cccgagccatcagtgagataccactctggaagagctcggattctaaccttgt 179 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 169 ggggggggcccgagccatcagtgagataccactctggaagagctcggattctaaccttgt 228 Query: 180 gtcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 229 gtcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 288 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 289 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 348 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 349 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 408 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 409 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 468 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 469 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 528 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 529 tgtcggctct 538
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 912 bits (460), Expect = 0.0 Identities = 480/489 (98%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95512 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 95571 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95572 gtgattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 95631 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95632 gggggggcccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 95691 Query: 181 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95692 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 95751 Query: 241 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95752 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 95811 Query: 301 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95812 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 95871 Query: 361 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95872 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 95931 Query: 421 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 480 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 95932 gggataacaggctgatctttcccaagagtccacatcgacgggaaggtttggcacctcgat 95991 Query: 481 gtcggctct 489 ||||||||| Sbjct: 95992 gtcggctct 96000
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 912 bits (460), Expect = 0.0 Identities = 480/489 (98%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29576 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 29635 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29636 gtgattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 29695 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29696 gggggggcccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 29755 Query: 181 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29756 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 29815 Query: 241 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29816 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 29875 Query: 301 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29876 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 29935 Query: 361 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29936 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 29995 Query: 421 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 480 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 29996 gggataacaggctgatctttcccaagagtccacatcgacgggaaggtttggcacctcgat 30055 Query: 481 gtcggctct 489 ||||||||| Sbjct: 30056 gtcggctct 30064
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 912 bits (460), Expect = 0.0 Identities = 480/489 (98%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10389120 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 10389179 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10389180 gtgattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 10389239 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10389240 gggggggcccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 10389299 Query: 181 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10389300 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 10389359 Query: 241 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10389360 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 10389419 Query: 301 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10389420 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 10389479 Query: 361 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10389480 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 10389539 Query: 421 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 480 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 10389540 gggataacaggctgatctttcccaagagtccacatcgacgggaaggtttggcacctcgat 10389599 Query: 481 gtcggctct 489 ||||||||| Sbjct: 10389600 gtcggctct 10389608 Score = 906 bits (457), Expect = 0.0 Identities = 482/492 (97%), Gaps = 3/492 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19940253 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 19940312 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19940313 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 19940372 Query: 121 nnnnnnn---cccgagccatcagtgagataccactctggaagagctcggattctaacctt 177 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19940373 ggggggggggcccgagccatcagtgagataccactctggaagagctcggattctaacctt 19940432 Query: 178 gtgtcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcc 237 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19940433 gtgtcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcc 19940492 Query: 238 tcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcg 297 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19940493 tcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcg 19940552 Query: 298 agtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtc 357 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19940553 agtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtc 19940612 Query: 358 ggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttact 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19940613 ggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttact 19940672 Query: 418 ctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctc 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19940673 ctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctc 19940732 Query: 478 gatgtcggctct 489 |||||||||||| Sbjct: 19940733 gatgtcggctct 19940744 Score = 357 bits (180), Expect = 2e-95 Identities = 207/218 (94%), Gaps = 4/218 (1%) Strand = Plus / Minus Query: 73 gggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttccnnnnnnncccga 132 |||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 10274988 gggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttccgggggggcccga 10274929 Query: 133 gccatcagtgagataccactctggaagagctcggattctaaccttgtgtcagaccc---- 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10274928 gccatcagtgagataccactctggaagagctcggattctaaccttgtgtcagacccaccc 10274869 Query: 189 gcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggt 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10274868 gcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggt 10274809 Query: 249 aacggaggcgtgcaaaggtttcctcgggccagacggac 286 |||||||||||||||||||||||||||||||||||||| Sbjct: 10274808 aacggaggcgtgcaaaggtttcctcgggccagacggac 10274771 Score = 321 bits (162), Expect = 1e-84 Identities = 185/195 (94%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 10275178 gtgaagatgcggactacctgcatctggacataaagaccctatgaagctttactgttccct 10275119 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 10275118 gggattggctttgggcctttcctgcgcagcttaggtggaagacgaagaaggcccccttcc 10275059 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10275058 gggggggcccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 10274999 Query: 181 tcagacccgcgggcc 195 ||||||||||||||| Sbjct: 10274998 tcagacccgcgggcc 10274984 Score = 105 bits (53), Expect = 1e-19 Identities = 74/81 (91%) Strand = Plus / Minus Query: 291 gtcctcgagtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagac 350 ||||| ||||||||||||| || ||||||||||||||||||||| ||||||| |||||| Sbjct: 15630999 gtccttgagtgcaaaggcaaaaaggagcttgactgcaagactcaaccgtcgaaaagagac 15630940 Query: 351 gaaagtcggccttagtgatcc 371 ||||||| ||||||||||||| Sbjct: 15630939 gaaagtcagccttagtgatcc 15630919 Score = 83.8 bits (42), Expect = 5e-13 Identities = 42/42 (100%) Strand = Plus / Minus Query: 228 ggcgtaggcctcccaaaaggtaacggaggcgtgcaaaggttt 269 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 4266217 ggcgtaggcctcccaaaaggtaacggaggcgtgcaaaggttt 4266176
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 912 bits (460), Expect = 0.0 Identities = 480/489 (98%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240013 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 9239954 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 9239953 gggattggctttgggcctttcctacgcagcttaggtggaaggcgaagaaggcccccttcc 9239894 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9239893 gggggggcccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 9239834 Query: 181 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9239833 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 9239774 Query: 241 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 300 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9239773 caaaaggtaatggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 9239714 Query: 301 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9239713 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 9239654 Query: 361 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9239653 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 9239594 Query: 421 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9239593 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 9239534 Query: 481 gtcggctct 489 ||||||||| Sbjct: 9239533 gtcggctct 9239525
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 912 bits (460), Expect = 0.0 Identities = 480/489 (98%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51226 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 51167 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 51166 gggattggctttgggcctttcctacgcagcttaggtggaaggcgaagaaggcccccttcc 51107 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51106 gggggggcccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 51047 Query: 181 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51046 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 50987 Query: 241 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 300 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50986 caaaaggtaatggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 50927 Query: 301 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50926 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 50867 Query: 361 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50866 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 50807 Query: 421 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50806 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 50747 Query: 481 gtcggctct 489 ||||||||| Sbjct: 50746 gtcggctct 50738
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 912 bits (460), Expect = 0.0 Identities = 480/489 (98%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10395159 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 10395218 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10395219 gtgattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 10395278 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10395279 gggggggcccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 10395338 Query: 181 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10395339 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 10395398 Query: 241 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10395399 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 10395458 Query: 301 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10395459 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 10395518 Query: 361 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10395519 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 10395578 Query: 421 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 480 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 10395579 gggataacaggctgatctttcccaagagtccacatcgacgggaaggtttggcacctcgat 10395638 Query: 481 gtcggctct 489 ||||||||| Sbjct: 10395639 gtcggctct 10395647 Score = 906 bits (457), Expect = 0.0 Identities = 482/492 (97%), Gaps = 3/492 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19951529 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 19951588 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19951589 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 19951648 Query: 121 nnnnnnn---cccgagccatcagtgagataccactctggaagagctcggattctaacctt 177 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19951649 ggggggggggcccgagccatcagtgagataccactctggaagagctcggattctaacctt 19951708 Query: 178 gtgtcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcc 237 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19951709 gtgtcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcc 19951768 Query: 238 tcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcg 297 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19951769 tcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcg 19951828 Query: 298 agtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtc 357 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19951829 agtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtc 19951888 Query: 358 ggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttact 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19951889 ggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttact 19951948 Query: 418 ctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctc 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19951949 ctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctc 19952008 Query: 478 gatgtcggctct 489 |||||||||||| Sbjct: 19952009 gatgtcggctct 19952020 Score = 357 bits (180), Expect = 2e-95 Identities = 207/218 (94%), Gaps = 4/218 (1%) Strand = Plus / Minus Query: 73 gggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttccnnnnnnncccga 132 |||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 10281027 gggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttccgggggggcccga 10280968 Query: 133 gccatcagtgagataccactctggaagagctcggattctaaccttgtgtcagaccc---- 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10280967 gccatcagtgagataccactctggaagagctcggattctaaccttgtgtcagacccaccc 10280908 Query: 189 gcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggt 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10280907 gcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggt 10280848 Query: 249 aacggaggcgtgcaaaggtttcctcgggccagacggac 286 |||||||||||||||||||||||||||||||||||||| Sbjct: 10280847 aacggaggcgtgcaaaggtttcctcgggccagacggac 10280810 Score = 321 bits (162), Expect = 1e-84 Identities = 185/195 (94%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 10281217 gtgaagatgcggactacctgcatctggacataaagaccctatgaagctttactgttccct 10281158 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 10281157 gggattggctttgggcctttcctgcgcagcttaggtggaagacgaagaaggcccccttcc 10281098 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10281097 gggggggcccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 10281038 Query: 181 tcagacccgcgggcc 195 ||||||||||||||| Sbjct: 10281037 tcagacccgcgggcc 10281023 Score = 105 bits (53), Expect = 1e-19 Identities = 74/81 (91%) Strand = Plus / Minus Query: 291 gtcctcgagtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagac 350 ||||| ||||||||||||| || ||||||||||||||||||||| ||||||| |||||| Sbjct: 15639240 gtccttgagtgcaaaggcaaaaaggagcttgactgcaagactcaaccgtcgaaaagagac 15639181 Query: 351 gaaagtcggccttagtgatcc 371 ||||||| ||||||||||||| Sbjct: 15639180 gaaagtcagccttagtgatcc 15639160 Score = 83.8 bits (42), Expect = 5e-13 Identities = 42/42 (100%) Strand = Plus / Minus Query: 228 ggcgtaggcctcccaaaaggtaacggaggcgtgcaaaggttt 269 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 4267038 ggcgtaggcctcccaaaaggtaacggaggcgtgcaaaggttt 4266997
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 906 bits (457), Expect = 0.0 Identities = 482/492 (97%), Gaps = 3/492 (0%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 45790 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 45731 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 45730 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 45671 Query: 121 nnnnnnn---cccgagccatcagtgagataccactctggaagagctcggattctaacctt 177 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 45670 ggggggggggcccgagccatcagtgagataccactctggaagagctcggattctaacctt 45611 Query: 178 gtgtcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcc 237 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 45610 gtgtcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcc 45551 Query: 238 tcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcg 297 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 45550 tcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcg 45491 Query: 298 agtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtc 357 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 45490 agtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtc 45431 Query: 358 ggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttact 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 45430 ggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttact 45371 Query: 418 ctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctc 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 45370 ctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctc 45311 Query: 478 gatgtcggctct 489 |||||||||||| Sbjct: 45310 gatgtcggctct 45299
>dbj|AK059311.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-G08, full insert sequence Length = 2105 Score = 896 bits (452), Expect = 0.0 Identities = 479/489 (97%), Gaps = 1/489 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 67 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 127 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128 gggggggcccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 187 Query: 181 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 188 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 247 Query: 241 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 300 |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 248 caaa-ggtaacggaggcgtgcaaaggtttcctcgggccagacagacattggtcctcgagt 306 Query: 301 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 307 gcaaaggcagaagggagcttgactgcgagactcacccgtcgagcagagacgaaagtcggc 366 Query: 361 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 426 Query: 421 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 427 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 486 Query: 481 gtcggctct 489 ||||||||| Sbjct: 487 gtcggctct 495
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 892 bits (450), Expect = 0.0 Identities = 480/490 (97%), Gaps = 3/490 (0%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117786 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 117727 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 117726 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggccc--ttcc 117669 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117668 gggggggcccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 117609 Query: 181 tca-gacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117608 tcaagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 117549 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117548 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 117489 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117488 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 117429 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117428 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 117369 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117368 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 117309 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 117308 tgtcggctct 117299 Score = 892 bits (450), Expect = 0.0 Identities = 480/490 (97%), Gaps = 3/490 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97332 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 97391 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 97392 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggccc--ttcc 97449 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97450 gggggggcccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 97509 Query: 181 tca-gacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97510 tcaagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 97569 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97570 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 97629 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97630 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 97689 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97690 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 97749 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97750 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 97809 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 97810 tgtcggctct 97819
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 890 bits (449), Expect = 0.0 Identities = 480/490 (97%), Gaps = 2/490 (0%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121557 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 121498 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121497 gggattggctttgggcttttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 121438 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctc-ggattctaaccttgt 179 || |||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121437 gggggggcc-gagccatcagtgagataccactctggaagagctcaggattctaaccttgt 121379 Query: 180 gtcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121378 gtcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 121319 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121318 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 121259 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121258 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 121199 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121198 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 121139 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121138 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 121079 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 121078 tgtcggctct 121069 Score = 890 bits (449), Expect = 0.0 Identities = 480/490 (97%), Gaps = 2/490 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101180 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 101239 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101240 gggattggctttgggcttttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 101299 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctc-ggattctaaccttgt 179 || |||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 101300 gggggggcc-gagccatcagtgagataccactctggaagagctcaggattctaaccttgt 101358 Query: 180 gtcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101359 gtcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 101418 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101419 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 101478 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101479 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 101538 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101539 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 101598 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101599 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 101658 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 101659 tgtcggctct 101668
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 890 bits (449), Expect = 0.0 Identities = 480/490 (97%), Gaps = 2/490 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7533 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 7592 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7593 gggattggctttgggcttttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 7652 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctc-ggattctaaccttgt 179 || |||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 7653 gggggggcc-gagccatcagtgagataccactctggaagagctcaggattctaaccttgt 7711 Query: 180 gtcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7712 gtcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 7771 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7772 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 7831 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7832 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 7891 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7892 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 7951 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7952 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 8011 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 8012 tgtcggctct 8021
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 890 bits (449), Expect = 0.0 Identities = 480/490 (97%), Gaps = 2/490 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2121 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 2180 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2181 gggattggctttgggcttttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 2240 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctc-ggattctaaccttgt 179 || |||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 2241 gggggggcc-gagccatcagtgagataccactctggaagagctcaggattctaaccttgt 2299 Query: 180 gtcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2300 gtcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 2359 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2360 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 2419 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2420 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 2479 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2480 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 2539 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2540 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 2599 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 2600 tgtcggctct 2609
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 888 bits (448), Expect = 0.0 Identities = 477/489 (97%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 5633719 gtgaagatgtggactacctgcacctagacagaaagaccctatgaagctttactgttccct 5633660 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 5633659 gggattggctttgggcctttcctgtgcagcttaggtggaaggcgaagaaggcccccttcc 5633600 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5633599 gggggggcccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 5633540 Query: 181 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5633539 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 5633480 Query: 241 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5633479 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 5633420 Query: 301 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 360 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 5633419 gcaaaggcagaagggagcttgactgcaagactcacccatcgagcagagacgaaagtcggc 5633360 Query: 361 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 5633359 cttagtgatccgacggtgccgagtggaaggtccgtcgctcaacggataaaagttactcta 5633300 Query: 421 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5633299 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 5633240 Query: 481 gtcggctct 489 ||||||||| Sbjct: 5633239 gtcggctct 5633231 Score = 119 bits (60), Expect = 9e-24 Identities = 60/60 (100%) Strand = Plus / Minus Query: 430 ggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgatgtcggctct 489 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24715347 ggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgatgtcggctct 24715288 Score = 85.7 bits (43), Expect = 1e-13 Identities = 122/147 (82%), Gaps = 1/147 (0%) Strand = Plus / Plus Query: 338 gtcgagcagagacgaaagtcggccttagtgatccgacggtgccgagtggaagggccgtcg 397 |||||||||||||||||||| ||| |||||||||| || ||| |||||||||| ||| Sbjct: 8526274 gtcgagcagagacgaaagtcagccatagtgatccgggagtcccgtgtggaagggctctcg 8526333 Query: 398 ctcaacggataaaagttactctagggataacaggctgatcttccccaagagtccacatcg 457 |||||||||| |||| ||| | |||||||||||||||| | |||||||| | |||| Sbjct: 8526334 ctcaacggatcaaaggtacgc-ggggataacaggctgatgattcccaagagctcttatcg 8526392 Query: 458 acgggaaggtttggcacctcgatgtcg 484 |||| ||||||||||||||||||| Sbjct: 8526393 acggagtcgtttggcacctcgatgtcg 8526419 Score = 83.8 bits (42), Expect = 5e-13 Identities = 42/42 (100%) Strand = Plus / Minus Query: 79 ttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 13451568 ttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 13451527 Score = 54.0 bits (27), Expect = 4e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 338 gtcgagcagagacgaaagtcggccttagtgatccgacggtgccgagtggaagggccgtcg 397 ||||| || ||||||||||||||| |||||||||| || ||| |||||| ||| ||| Sbjct: 13397703 gtcgaacaaagacgaaagtcggccatagtgatccgggagtcccgtgtggaatggctctcg 13397644 Query: 398 ctcaacggataaaag 412 |||||||||| |||| Sbjct: 13397643 ctcaacggatcaaag 13397629
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 888 bits (448), Expect = 0.0 Identities = 477/489 (97%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 5633708 gtgaagatgtggactacctgcacctagacagaaagaccctatgaagctttactgttccct 5633649 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 5633648 gggattggctttgggcctttcctgtgcagcttaggtggaaggcgaagaaggcccccttcc 5633589 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5633588 gggggggcccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 5633529 Query: 181 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5633528 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 5633469 Query: 241 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5633468 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 5633409 Query: 301 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 360 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 5633408 gcaaaggcagaagggagcttgactgcaagactcacccatcgagcagagacgaaagtcggc 5633349 Query: 361 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 5633348 cttagtgatccgacggtgccgagtggaaggtccgtcgctcaacggataaaagttactcta 5633289 Query: 421 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5633288 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 5633229 Query: 481 gtcggctct 489 ||||||||| Sbjct: 5633228 gtcggctct 5633220 Score = 119 bits (60), Expect = 9e-24 Identities = 60/60 (100%) Strand = Plus / Minus Query: 430 ggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgatgtcggctct 489 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24643553 ggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgatgtcggctct 24643494 Score = 85.7 bits (43), Expect = 1e-13 Identities = 122/147 (82%), Gaps = 1/147 (0%) Strand = Plus / Plus Query: 338 gtcgagcagagacgaaagtcggccttagtgatccgacggtgccgagtggaagggccgtcg 397 |||||||||||||||||||| ||| |||||||||| || ||| |||||||||| ||| Sbjct: 8526157 gtcgagcagagacgaaagtcagccatagtgatccgggagtcccgtgtggaagggctctcg 8526216 Query: 398 ctcaacggataaaagttactctagggataacaggctgatcttccccaagagtccacatcg 457 |||||||||| |||| ||| | |||||||||||||||| | |||||||| | |||| Sbjct: 8526217 ctcaacggatcaaaggtacgc-ggggataacaggctgatgattcccaagagctcttatcg 8526275 Query: 458 acgggaaggtttggcacctcgatgtcg 484 |||| ||||||||||||||||||| Sbjct: 8526276 acggagtcgtttggcacctcgatgtcg 8526302 Score = 83.8 bits (42), Expect = 5e-13 Identities = 42/42 (100%) Strand = Plus / Minus Query: 79 ttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 13405842 ttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 13405801 Score = 54.0 bits (27), Expect = 4e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 338 gtcgagcagagacgaaagtcggccttagtgatccgacggtgccgagtggaagggccgtcg 397 ||||| || ||||||||||||||| |||||||||| || ||| |||||| ||| ||| Sbjct: 13351977 gtcgaacaaagacgaaagtcggccatagtgatccgggagtcccgtgtggaatggctctcg 13351918 Query: 398 ctcaacggataaaag 412 |||||||||| |||| Sbjct: 13351917 ctcaacggatcaaag 13351903
>emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC OSJNBa0021D06 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 139684 Score = 888 bits (448), Expect = 0.0 Identities = 477/489 (97%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 19166 gtgaagatgtggactacctgcacctagacagaaagaccctatgaagctttactgttccct 19225 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 19226 gggattggctttgggcctttcctgtgcagcttaggtggaaggcgaagaaggcccccttcc 19285 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19286 gggggggcccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 19345 Query: 181 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19346 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 19405 Query: 241 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19406 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 19465 Query: 301 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 360 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 19466 gcaaaggcagaagggagcttgactgcaagactcacccatcgagcagagacgaaagtcggc 19525 Query: 361 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 19526 cttagtgatccgacggtgccgagtggaaggtccgtcgctcaacggataaaagttactcta 19585 Query: 421 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19586 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 19645 Query: 481 gtcggctct 489 ||||||||| Sbjct: 19646 gtcggctct 19654
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 848 bits (428), Expect = 0.0 Identities = 472/489 (96%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||| Sbjct: 814903 gtgaagatgcggactacctacacctagacagaaaaaccctatgaagctttactgttccct 814962 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 814963 gggattggctttgggcctttcctgcgcagcttaggtggaaagcgaagaaggcccccttcc 815022 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 815023 gggggggcccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 815082 Query: 181 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 815083 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 815142 Query: 241 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 300 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 815143 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtccttgagt 815202 Query: 301 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 360 ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct: 815203 gcaaaggcagaagggagcttgactgcaagactcacccatcgagcagagatgaaagtcggc 815262 Query: 361 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 420 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 815263 cttagtgatctgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 815322 Query: 421 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 480 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 815323 gggataacatgctgatcttccccaagagtccacatcgacaggaaggtttggcacctcgat 815382 Query: 481 gtcggctct 489 ||||||||| Sbjct: 815383 gtcggctct 815391
>dbj|AP004121.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1442_E05 Length = 162407 Score = 848 bits (428), Expect = 0.0 Identities = 472/489 (96%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||| Sbjct: 24111 gtgaagatgcggactacctacacctagacagaaaaaccctatgaagctttactgttccct 24170 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 24171 gggattggctttgggcctttcctgcgcagcttaggtggaaagcgaagaaggcccccttcc 24230 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24231 gggggggcccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 24290 Query: 181 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24291 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 24350 Query: 241 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 300 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 24351 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtccttgagt 24410 Query: 301 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 360 ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct: 24411 gcaaaggcagaagggagcttgactgcaagactcacccatcgagcagagatgaaagtcggc 24470 Query: 361 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 420 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24471 cttagtgatctgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 24530 Query: 421 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 480 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 24531 gggataacatgctgatcttccccaagagtccacatcgacaggaaggtttggcacctcgat 24590 Query: 481 gtcggctct 489 ||||||||| Sbjct: 24591 gtcggctct 24599
>dbj|AP004867.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0036E06 Length = 137926 Score = 848 bits (428), Expect = 0.0 Identities = 472/489 (96%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||| Sbjct: 93034 gtgaagatgcggactacctacacctagacagaaaaaccctatgaagctttactgttccct 93093 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 93094 gggattggctttgggcctttcctgcgcagcttaggtggaaagcgaagaaggcccccttcc 93153 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93154 gggggggcccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 93213 Query: 181 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93214 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 93273 Query: 241 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 300 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 93274 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtccttgagt 93333 Query: 301 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 360 ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct: 93334 gcaaaggcagaagggagcttgactgcaagactcacccatcgagcagagatgaaagtcggc 93393 Query: 361 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 420 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93394 cttagtgatctgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 93453 Query: 421 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 480 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 93454 gggataacatgctgatcttccccaagagtccacatcgacaggaaggtttggcacctcgat 93513 Query: 481 gtcggctct 489 ||||||||| Sbjct: 93514 gtcggctct 93522
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 827 bits (417), Expect = 0.0 Identities = 471/490 (96%), Gaps = 1/490 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2537 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 2596 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2597 gggattggctttgggcttttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 2656 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 |||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 2657 gggggggcccgagccatcagtgagataccactctggaagagctagaattctaaccttgtg 2716 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 2717 tcaggacctgcgggccaagggacagtctcaggtagacagttcctatggggcgtaggcctc 2776 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 ||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| Sbjct: 2777 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccggacggagattggccctcgag 2836 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 2837 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 2896 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2897 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 2956 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 2957 agggataacaggctgatcttccccaagagttcacatcgacgggaaggtttggcacctcga 3016 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 3017 tgtcggctct 3026
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 827 bits (417), Expect = 0.0 Identities = 471/490 (96%), Gaps = 1/490 (0%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132181 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 132122 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132121 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 132062 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 |||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 132061 gggggggcccgagccatcagtgagataccactctggaagagctagaattctaaccttgtg 132002 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132001 tcaggacctacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 131942 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 ||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| Sbjct: 131941 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccggacggagattggccctcgag 131882 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 131881 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 131822 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131821 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 131762 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 131761 agggataacaggctgatcttccccaagagatcacatcgacgggaaggtttggcacctcga 131702 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 131701 tgtcggctct 131692 Score = 827 bits (417), Expect = 0.0 Identities = 471/490 (96%), Gaps = 1/490 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105790 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 105849 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105850 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 105909 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 |||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 105910 gggggggcccgagccatcagtgagataccactctggaagagctagaattctaaccttgtg 105969 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105970 tcaggacctacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 106029 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 ||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| Sbjct: 106030 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccggacggagattggccctcgag 106089 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 106090 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 106149 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106150 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 106209 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 106210 agggataacaggctgatcttccccaagagatcacatcgacgggaaggtttggcacctcga 106269 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 106270 tgtcggctct 106279
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 827 bits (417), Expect = 0.0 Identities = 471/490 (96%), Gaps = 1/490 (0%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137667 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 137608 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 137607 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcctccttcc 137548 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 |||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 137547 gggggggcccgagccatcagtgagataccactctggaagagctagaattctaaccttgtg 137488 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137487 tcaggacctacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 137428 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 ||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| Sbjct: 137427 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccggacggagattggccctcgag 137368 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 137367 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 137308 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137307 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 137248 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 137247 agggataacaggctgatcttccccaagagttcacatcgacgggaaggtttggcacctcga 137188 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 137187 tgtcggctct 137178 Score = 827 bits (417), Expect = 0.0 Identities = 471/490 (96%), Gaps = 1/490 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111632 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 111691 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 111692 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcctccttcc 111751 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 |||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 111752 gggggggcccgagccatcagtgagataccactctggaagagctagaattctaaccttgtg 111811 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111812 tcaggacctacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 111871 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 ||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| Sbjct: 111872 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccggacggagattggccctcgag 111931 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 111932 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 111991 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111992 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 112051 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 112052 agggataacaggctgatcttccccaagagttcacatcgacgggaaggtttggcacctcga 112111 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 112112 tgtcggctct 112121
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 819 bits (413), Expect = 0.0 Identities = 470/490 (95%), Gaps = 1/490 (0%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 133859 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgttccct 133800 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133799 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcg 133740 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 |||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 133739 gggggggcccgagccatcagtgagataccactctggaagagctagaattctaaccttgtg 133680 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133679 tcaggacctacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 133620 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 133619 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggagattggccctcgag 133560 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 133559 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 133500 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133499 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 133440 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 133439 agggataacaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcga 133380 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 133379 tgtcggctct 133370 Score = 819 bits (413), Expect = 0.0 Identities = 470/490 (95%), Gaps = 1/490 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 108047 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgttccct 108106 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108107 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcg 108166 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 |||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 108167 gggggggcccgagccatcagtgagataccactctggaagagctagaattctaaccttgtg 108226 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108227 tcaggacctacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 108286 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 108287 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggagattggccctcgag 108346 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 108347 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 108406 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108407 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 108466 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 108467 agggataacaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcga 108526 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 108527 tgtcggctct 108536
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 819 bits (413), Expect = 0.0 Identities = 470/490 (95%), Gaps = 1/490 (0%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140060 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 140001 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 140000 gggattggctttgggcctttcctgcgcagcttaggtggagggcgaagaaggcctccttcc 139941 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 |||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 139940 gggggggcccgagccatcagtgagataccactctggaagagctagaattctaaccttgtg 139881 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139880 tcaggacctacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 139821 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 ||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| Sbjct: 139820 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccggacggagattggccctcgag 139761 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 139760 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 139701 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139700 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 139641 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 139640 agggataacaggctgatcttccccaagagttcacatcgacgggaaggtttggcacctcga 139581 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 139580 tgtcggctct 139571 Score = 819 bits (413), Expect = 0.0 Identities = 470/490 (95%), Gaps = 1/490 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113597 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 113656 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 113657 gggattggctttgggcctttcctgcgcagcttaggtggagggcgaagaaggcctccttcc 113716 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 |||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 113717 gggggggcccgagccatcagtgagataccactctggaagagctagaattctaaccttgtg 113776 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113777 tcaggacctacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 113836 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 ||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| Sbjct: 113837 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccggacggagattggccctcgag 113896 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 113897 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 113956 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113957 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 114016 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 114017 agggataacaggctgatcttccccaagagttcacatcgacgggaaggtttggcacctcga 114076 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 114077 tgtcggctct 114086
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 819 bits (413), Expect = 0.0 Identities = 470/490 (95%), Gaps = 1/490 (0%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129750 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 129691 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129690 gggattggctttgggcttttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 129631 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 |||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 129630 gggggggcccgagccatcagtgagataccactctggaagagctagaattctaaccttgtg 129571 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 129570 tcaggacctacgggccaagggacattctcaggtagacagtttctatggggcgtaggcctc 129511 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 ||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| Sbjct: 129510 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccggacggagattggccctcgag 129451 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 129450 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 129391 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129390 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 129331 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 129330 agggataacaggctgatcttccccaagagttcacatcgacgggaaggtttggcacctcga 129271 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 129270 tgtcggctct 129261 Score = 819 bits (413), Expect = 0.0 Identities = 470/490 (95%), Gaps = 1/490 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103695 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 103754 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103755 gggattggctttgggcttttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 103814 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 |||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 103815 gggggggcccgagccatcagtgagataccactctggaagagctagaattctaaccttgtg 103874 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 103875 tcaggacctacgggccaagggacattctcaggtagacagtttctatggggcgtaggcctc 103934 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 ||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| Sbjct: 103935 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccggacggagattggccctcgag 103994 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 103995 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 104054 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104055 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 104114 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 104115 agggataacaggctgatcttccccaagagttcacatcgacgggaaggtttggcacctcga 104174 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 104175 tgtcggctct 104184
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 819 bits (413), Expect = 0.0 Identities = 470/490 (95%), Gaps = 1/490 (0%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 134138 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgttccct 134079 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134078 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcg 134019 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 |||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 134018 gggggggcccgagccatcagtgagataccactctggaagagctagaattctaaccttgtg 133959 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133958 tcaggacctacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 133899 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 133898 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggagattggccctcgag 133839 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 133838 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 133779 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133778 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 133719 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 133718 agggataacaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcga 133659 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 133658 tgtcggctct 133649 Score = 819 bits (413), Expect = 0.0 Identities = 470/490 (95%), Gaps = 1/490 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 108269 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgttccct 108328 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108329 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcg 108388 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 |||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 108389 gggggggcccgagccatcagtgagataccactctggaagagctagaattctaaccttgtg 108448 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108449 tcaggacctacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 108508 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 108509 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggagattggccctcgag 108568 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 108569 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 108628 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108629 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 108688 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 108689 agggataacaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcga 108748 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 108749 tgtcggctct 108758
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 811 bits (409), Expect = 0.0 Identities = 469/490 (95%), Gaps = 1/490 (0%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137537 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 137478 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 137477 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcctccttcc 137418 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 |||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 137417 gggggggcccgagccatcagtgagataccactctggaagagctagaattctaaccttgtg 137358 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 ||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 137357 ccaggacctacgggccaagggacagtctcaggcagacagtttctatggggcgtaggcctc 137298 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 ||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| Sbjct: 137297 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccggacggagattggccctcgag 137238 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 137237 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 137178 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137177 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 137118 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 137117 agggataacaggctgatcttccccaagagttcacatcgacgggaaggtttggcacctcga 137058 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 137057 tgtcggctct 137048 Score = 811 bits (409), Expect = 0.0 Identities = 469/490 (95%), Gaps = 1/490 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112408 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 112467 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 112468 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcctccttcc 112527 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 |||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 112528 gggggggcccgagccatcagtgagataccactctggaagagctagaattctaaccttgtg 112587 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 ||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 112588 ccaggacctacgggccaagggacagtctcaggcagacagtttctatggggcgtaggcctc 112647 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 ||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| Sbjct: 112648 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccggacggagattggccctcgag 112707 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 112708 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 112767 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112768 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 112827 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 112828 agggataacaggctgatcttccccaagagttcacatcgacgggaaggtttggcacctcga 112887 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 112888 tgtcggctct 112897
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 811 bits (409), Expect = 0.0 Identities = 469/490 (95%), Gaps = 1/490 (0%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 131917 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgttccct 131858 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131857 gggattggctttgggcttttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 131798 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 |||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 131797 gggggggcccgagccatcagtgagataccactctggaagagctagaattctaaccttgtg 131738 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131737 tcaggacctacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 131678 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 ||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| Sbjct: 131677 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccggacggagattggccctcgag 131618 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 131617 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 131558 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131557 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 131498 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 131497 agggataacaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcga 131438 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 131437 tgtcggctct 131428 Score = 811 bits (409), Expect = 0.0 Identities = 469/490 (95%), Gaps = 1/490 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106732 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgttccct 106791 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106792 gggattggctttgggcttttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 106851 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 |||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 106852 gggggggcccgagccatcagtgagataccactctggaagagctagaattctaaccttgtg 106911 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106912 tcaggacctacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 106971 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 ||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| Sbjct: 106972 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccggacggagattggccctcgag 107031 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 107032 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 107091 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107092 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 107151 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 107152 agggataacaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcga 107211 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 107212 tgtcggctct 107221
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 803 bits (405), Expect = 0.0 Identities = 468/490 (95%), Gaps = 1/490 (0%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 134258 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgttccct 134199 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 134198 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcctccttcc 134139 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 |||||||||||||||||||||||||||||||| ||| | |||||||||||||| Sbjct: 134138 gggggggcccgagccatcagtgagataccactctggaagggctagaattctaaccttgtg 134079 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134078 tcaggacctacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 134019 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 ||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| Sbjct: 134018 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccggacggagattggccctcgag 133959 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 133958 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 133899 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133898 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 133839 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 133838 agggataacaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcga 133779 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 133778 tgtcggctct 133769 Score = 803 bits (405), Expect = 0.0 Identities = 468/490 (95%), Gaps = 1/490 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 108372 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgttccct 108431 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 108432 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcctccttcc 108491 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 |||||||||||||||||||||||||||||||| ||| | |||||||||||||| Sbjct: 108492 gggggggcccgagccatcagtgagataccactctggaagggctagaattctaaccttgtg 108551 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108552 tcaggacctacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 108611 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 ||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| Sbjct: 108612 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccggacggagattggccctcgag 108671 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 108672 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 108731 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108732 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 108791 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 108792 agggataacaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcga 108851 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 108852 tgtcggctct 108861
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 803 bits (405), Expect = 0.0 Identities = 468/490 (95%), Gaps = 1/490 (0%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 138316 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgttccct 138257 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 138256 gggattggctttgggcctttcctgcgcagcttaggtggagggcgaagaaggcctccttcc 138197 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 |||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 138196 gggggggcccgagccatcagtgagataccactctggaagagctagaattctaaccttgtg 138137 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138136 tcaggacctacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 138077 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 ||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| Sbjct: 138076 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccggacggagattggccctcgag 138017 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 138016 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 137957 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137956 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 137897 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 137896 agggataacaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcga 137837 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 137836 tgtcggctct 137827 Score = 803 bits (405), Expect = 0.0 Identities = 468/490 (95%), Gaps = 1/490 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 111744 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgttccct 111803 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 111804 gggattggctttgggcctttcctgcgcagcttaggtggagggcgaagaaggcctccttcc 111863 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 |||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 111864 gggggggcccgagccatcagtgagataccactctggaagagctagaattctaaccttgtg 111923 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111924 tcaggacctacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 111983 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 ||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| Sbjct: 111984 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccggacggagattggccctcgag 112043 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 112044 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 112103 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112104 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 112163 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 112164 agggataacaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcga 112223 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 112224 tgtcggctct 112233
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 803 bits (405), Expect = 0.0 Identities = 468/490 (95%), Gaps = 1/490 (0%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 132945 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgttccct 132886 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 132885 gggattggctttgggcctttcctgcgcagcttaggtggagggcgaagaaggcctccttcc 132826 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 |||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 132825 gggggggcccgagccatcagtgagataccactctggaagagctagaattctaaccttgtg 132766 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132765 tcaggacctacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 132706 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 ||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| Sbjct: 132705 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccggacggagattggccctcgag 132646 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 132645 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 132586 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 132585 ccttagtgatccgacggtgccgagtggaagggccgtcgcccaacggataaaagttactct 132526 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 132525 agggataacaggctgatcttccccaagagttcacatcgacgggaaggtttggcacctcga 132466 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 132465 tgtcggctct 132456 Score = 803 bits (405), Expect = 0.0 Identities = 468/490 (95%), Gaps = 1/490 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 107337 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgttccct 107396 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 107397 gggattggctttgggcctttcctgcgcagcttaggtggagggcgaagaaggcctccttcc 107456 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 |||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 107457 gggggggcccgagccatcagtgagataccactctggaagagctagaattctaaccttgtg 107516 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107517 tcaggacctacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 107576 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 ||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| Sbjct: 107577 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccggacggagattggccctcgag 107636 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 107637 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 107696 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 107697 ccttagtgatccgacggtgccgagtggaagggccgtcgcccaacggataaaagttactct 107756 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 107757 agggataacaggctgatcttccccaagagttcacatcgacgggaaggtttggcacctcga 107816 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 107817 tgtcggctct 107826
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 803 bits (405), Expect = 0.0 Identities = 468/490 (95%), Gaps = 1/490 (0%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 133503 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgttccct 133444 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 133443 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcctccttcc 133384 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 |||||||||||||||||||||||||||||||| ||| | |||||||||||||| Sbjct: 133383 gggggggcccgagccatcagtgagataccactctggaagggctagaattctaaccttgtg 133324 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133323 tcaggacctacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 133264 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 ||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| Sbjct: 133263 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccggacggagattggccctcgag 133204 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 133203 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 133144 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133143 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 133084 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 133083 agggataacaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcga 133024 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 133023 tgtcggctct 133014 Score = 803 bits (405), Expect = 0.0 Identities = 468/490 (95%), Gaps = 1/490 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 107533 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgttccct 107592 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 107593 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcctccttcc 107652 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 |||||||||||||||||||||||||||||||| ||| | |||||||||||||| Sbjct: 107653 gggggggcccgagccatcagtgagataccactctggaagggctagaattctaaccttgtg 107712 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107713 tcaggacctacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 107772 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 ||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| Sbjct: 107773 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccggacggagattggccctcgag 107832 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 107833 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 107892 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107893 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 107952 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 107953 agggataacaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcga 108012 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 108013 tgtcggctct 108022
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 803 bits (405), Expect = 0.0 Identities = 468/490 (95%), Gaps = 1/490 (0%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 130956 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgttccct 130897 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 130896 gggattggctttgggcttttcctgcgcagcttaggtggaaggcgaagaaggcctccttcc 130837 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 |||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 130836 gggggggcccgagccatcagtgagataccactctggaagagctagaattctaaccttgtg 130777 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130776 tcaggacctacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 130717 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 ||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| Sbjct: 130716 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccggacggagattggccctcgag 130657 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 130656 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 130597 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130596 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 130537 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 130536 agggataacaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcga 130477 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 130476 tgtcggctct 130467 Score = 803 bits (405), Expect = 0.0 Identities = 468/490 (95%), Gaps = 1/490 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 105808 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgttccct 105867 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 105868 gggattggctttgggcttttcctgcgcagcttaggtggaaggcgaagaaggcctccttcc 105927 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 |||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 105928 gggggggcccgagccatcagtgagataccactctggaagagctagaattctaaccttgtg 105987 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105988 tcaggacctacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 106047 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 ||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| Sbjct: 106048 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccggacggagattggccctcgag 106107 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 106108 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 106167 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106168 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 106227 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 106228 agggataacaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcga 106287 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 106288 tgtcggctct 106297
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 803 bits (405), Expect = 0.0 Identities = 468/490 (95%), Gaps = 1/490 (0%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 134550 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgttccct 134491 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 134490 gggattggctttgggcctttcctgcgcagcttaggtggagggcgaagaaggcctccttcc 134431 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 |||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 134430 gggggggcccgagccatcagtgagataccactctggaagagctagaattctaaccttgtg 134371 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134370 tcaggacctacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 134311 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 ||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| Sbjct: 134310 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccggacggagattggccctcgag 134251 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 134250 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 134191 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134190 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 134131 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 134130 agggataacaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcga 134071 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 134070 tgtcggctct 134061 Score = 803 bits (405), Expect = 0.0 Identities = 468/490 (95%), Gaps = 1/490 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 107875 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgttccct 107934 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 107935 gggattggctttgggcctttcctgcgcagcttaggtggagggcgaagaaggcctccttcc 107994 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 |||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 107995 gggggggcccgagccatcagtgagataccactctggaagagctagaattctaaccttgtg 108054 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108055 tcaggacctacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 108114 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 ||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| Sbjct: 108115 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccggacggagattggccctcgag 108174 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 108175 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 108234 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108235 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 108294 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 108295 agggataacaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcga 108354 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 108355 tgtcggctct 108364
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 803 bits (405), Expect = 0.0 Identities = 468/490 (95%), Gaps = 1/490 (0%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 133639 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgttccct 133580 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 133579 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcctccttcc 133520 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 |||||||||||||||||||||||||||||||| ||| | |||||||||||||| Sbjct: 133519 gggggggcccgagccatcagtgagataccactctggaagggctagaattctaaccttgtg 133460 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133459 tcaggacctacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 133400 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 ||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| Sbjct: 133399 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccggacggagattggccctcgag 133340 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 133339 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 133280 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133279 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 133220 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 133219 agggataacaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcga 133160 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 133159 tgtcggctct 133150 Score = 803 bits (405), Expect = 0.0 Identities = 468/490 (95%), Gaps = 1/490 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 107704 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgttccct 107763 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 107764 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcctccttcc 107823 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 |||||||||||||||||||||||||||||||| ||| | |||||||||||||| Sbjct: 107824 gggggggcccgagccatcagtgagataccactctggaagggctagaattctaaccttgtg 107883 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107884 tcaggacctacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 107943 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 ||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| Sbjct: 107944 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccggacggagattggccctcgag 108003 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 108004 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 108063 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108064 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 108123 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 108124 agggataacaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcga 108183 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 108184 tgtcggctct 108193
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 803 bits (405), Expect = 0.0 Identities = 468/490 (95%), Gaps = 1/490 (0%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 133637 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgttccct 133578 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 133577 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcctccttcc 133518 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 |||||||||||||||||||||||||||||||| ||| | |||||||||||||| Sbjct: 133517 gggggggcccgagccatcagtgagataccactctggaagggctagaattctaaccttgtg 133458 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133457 tcaggacctacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 133398 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 ||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| Sbjct: 133397 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccggacggagattggccctcgag 133338 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 133337 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 133278 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133277 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 133218 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 133217 agggataacaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcga 133158 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 133157 tgtcggctct 133148 Score = 803 bits (405), Expect = 0.0 Identities = 468/490 (95%), Gaps = 1/490 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 107701 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgttccct 107760 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 107761 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcctccttcc 107820 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 |||||||||||||||||||||||||||||||| ||| | |||||||||||||| Sbjct: 107821 gggggggcccgagccatcagtgagataccactctggaagggctagaattctaaccttgtg 107880 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107881 tcaggacctacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 107940 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 ||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| Sbjct: 107941 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccggacggagattggccctcgag 108000 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 108001 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 108060 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108061 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 108120 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 108121 agggataacaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcga 108180 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 108181 tgtcggctct 108190
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 803 bits (405), Expect = 0.0 Identities = 468/490 (95%), Gaps = 1/490 (0%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 133549 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgttccct 133490 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 133489 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcctccttcc 133430 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 |||||||||||||||||||||||||||||||| ||| | |||||||||||||| Sbjct: 133429 gggggggcccgagccatcagtgagataccactctggaagggctagaattctaaccttgtg 133370 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133369 tcaggacctacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 133310 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 ||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| Sbjct: 133309 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccggacggagattggccctcgag 133250 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 133249 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 133190 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133189 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 133130 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 133129 agggataacaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcga 133070 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 133069 tgtcggctct 133060 Score = 803 bits (405), Expect = 0.0 Identities = 468/490 (95%), Gaps = 1/490 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 107579 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgttccct 107638 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 107639 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcctccttcc 107698 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 |||||||||||||||||||||||||||||||| ||| | |||||||||||||| Sbjct: 107699 gggggggcccgagccatcagtgagataccactctggaagggctagaattctaaccttgtg 107758 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107759 tcaggacctacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 107818 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 ||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| Sbjct: 107819 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccggacggagattggccctcgag 107878 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 107879 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 107938 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107939 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 107998 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 107999 agggataacaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcga 108058 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 108059 tgtcggctct 108068
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 803 bits (405), Expect = 0.0 Identities = 468/490 (95%), Gaps = 1/490 (0%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 134256 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgttccct 134197 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 134196 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcctccttcc 134137 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 |||||||||||||||||||||||||||||||| ||| | |||||||||||||| Sbjct: 134136 gggggggcccgagccatcagtgagataccactctggaagggctagaattctaaccttgtg 134077 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134076 tcaggacctacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 134017 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 ||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| Sbjct: 134016 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccggacggagattggccctcgag 133957 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 133956 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 133897 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133896 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 133837 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 133836 agggataacaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcga 133777 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 133776 tgtcggctct 133767 Score = 803 bits (405), Expect = 0.0 Identities = 468/490 (95%), Gaps = 1/490 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 108370 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgttccct 108429 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 108430 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcctccttcc 108489 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 |||||||||||||||||||||||||||||||| ||| | |||||||||||||| Sbjct: 108490 gggggggcccgagccatcagtgagataccactctggaagggctagaattctaaccttgtg 108549 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108550 tcaggacctacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 108609 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 ||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| Sbjct: 108610 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccggacggagattggccctcgag 108669 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 108670 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 108729 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108730 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 108789 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 108790 agggataacaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcga 108849 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 108850 tgtcggctct 108859
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 803 bits (405), Expect = 0.0 Identities = 468/490 (95%), Gaps = 1/490 (0%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 133987 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgttccct 133928 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 133927 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcctccttcc 133868 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 |||||||||||||||||||||||||||||||| ||| | |||||||||||||| Sbjct: 133867 gggggggcccgagccatcagtgagataccactctggaagggctagaattctaaccttgtg 133808 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133807 tcaggacctacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 133748 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 ||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| Sbjct: 133747 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccggacggagattggccctcgag 133688 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 133687 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 133628 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133627 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 133568 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 133567 agggataacaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcga 133508 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 133507 tgtcggctct 133498 Score = 803 bits (405), Expect = 0.0 Identities = 468/490 (95%), Gaps = 1/490 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 108151 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgttccct 108210 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 108211 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcctccttcc 108270 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 |||||||||||||||||||||||||||||||| ||| | |||||||||||||| Sbjct: 108271 gggggggcccgagccatcagtgagataccactctggaagggctagaattctaaccttgtg 108330 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108331 tcaggacctacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 108390 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 ||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| Sbjct: 108391 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccggacggagattggccctcgag 108450 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 108451 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 108510 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108511 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 108570 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 108571 agggataacaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcga 108630 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 108631 tgtcggctct 108640
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 803 bits (405), Expect = 0.0 Identities = 468/490 (95%), Gaps = 1/490 (0%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 133516 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgttccct 133457 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 133456 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcctccttcc 133397 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 |||||||||||||||||||||||||||||||| ||| | |||||||||||||| Sbjct: 133396 gggggggcccgagccatcagtgagataccactctggaagggctagaattctaaccttgtg 133337 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133336 tcaggacctacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 133277 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 ||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| Sbjct: 133276 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccggacggagattggccctcgag 133217 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 133216 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 133157 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133156 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 133097 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 133096 agggataacaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcga 133037 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 133036 tgtcggctct 133027 Score = 803 bits (405), Expect = 0.0 Identities = 468/490 (95%), Gaps = 1/490 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 107546 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgttccct 107605 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 107606 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcctccttcc 107665 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 |||||||||||||||||||||||||||||||| ||| | |||||||||||||| Sbjct: 107666 gggggggcccgagccatcagtgagataccactctggaagggctagaattctaaccttgtg 107725 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107726 tcaggacctacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 107785 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 ||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| Sbjct: 107786 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccggacggagattggccctcgag 107845 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 107846 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 107905 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107906 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 107965 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 107966 agggataacaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcga 108025 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 108026 tgtcggctct 108035
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 803 bits (405), Expect = 0.0 Identities = 468/490 (95%), Gaps = 1/490 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 2043 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgttccct 2102 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 2103 gggattggctttgggcctttcctgcgcagcttaggtggagggcgaagaaggcctccttcc 2162 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 |||||||| ||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 2163 gggggggcccgagccgtcagtgagataccactctggaagagctagaattctaaccttgtg 2222 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2223 tcaggacctacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 2282 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 2283 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggagattggccctcgag 2342 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 2343 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 2402 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2403 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 2462 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 2463 agggataacaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcga 2522 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 2523 tgtcggctct 2532
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 795 bits (401), Expect = 0.0 Identities = 467/490 (95%), Gaps = 1/490 (0%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| Sbjct: 137462 gtgaagatgcggactacccgcacctggacagaaagaccctatgaagcttcactgttccct 137403 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 137402 gggattggctttgggcttttcctgcgcagcttaggtggaaggcgaagaaggcctccttcc 137343 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 |||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 137342 gggggggcccgagccatcagtgagataccactctggaagagctagaattctaaccttgtg 137283 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137282 tcaggacctacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 137223 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 ||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| Sbjct: 137222 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccggacggagattggccctcgag 137163 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 137162 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 137103 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137102 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 137043 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 137042 agggataacaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcga 136983 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 136982 tgtcggctct 136973 Score = 795 bits (401), Expect = 0.0 Identities = 467/490 (95%), Gaps = 1/490 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| Sbjct: 111635 gtgaagatgcggactacccgcacctggacagaaagaccctatgaagcttcactgttccct 111694 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 111695 gggattggctttgggcttttcctgcgcagcttaggtggaaggcgaagaaggcctccttcc 111754 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 |||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 111755 gggggggcccgagccatcagtgagataccactctggaagagctagaattctaaccttgtg 111814 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111815 tcaggacctacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 111874 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 ||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| Sbjct: 111875 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccggacggagattggccctcgag 111934 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 111935 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 111994 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111995 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 112054 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 112055 agggataacaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcga 112114 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 112115 tgtcggctct 112124
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 795 bits (401), Expect = 0.0 Identities = 467/490 (95%), Gaps = 1/490 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 3815 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgttccct 3874 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3875 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 3934 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 |||||||| ||||||||||||||||||||||| || | |||||||||||||| Sbjct: 3935 gggggggcccgagccgtcagtgagataccactctggaagggcaagaattctaaccttgtg 3994 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3995 tcaggacctacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 4054 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 ||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| Sbjct: 4055 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccggacggagattggccctcgag 4114 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 4115 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 4174 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4175 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 4234 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 4235 agggataacaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcga 4294 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 4295 tgtcggctct 4304
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 795 bits (401), Expect = 0.0 Identities = 467/490 (95%), Gaps = 1/490 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 2136 gtgaagatgcggactacctgcacctagacagaaagaccctatgaagcttcactgttccct 2195 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 2196 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcctccttcc 2255 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 |||||||||||||||||||||||||||||||| ||| | |||||||||||||| Sbjct: 2256 gggggggcccgagccatcagtgagataccactctggaagggctagaattctaaccttgtg 2315 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2316 tcaggacctacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 2375 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 ||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| Sbjct: 2376 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccggacggagattggccctcgag 2435 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 2436 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 2495 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2496 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 2555 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 2556 agggataacaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcga 2615 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 2616 tgtcggctct 2625
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 787 bits (397), Expect = 0.0 Identities = 466/490 (95%), Gaps = 1/490 (0%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 130733 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgttccct 130674 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 130673 gggattggctttgggcttttcctgcgcagcttaggtggaaggcgaagaaggcctccttcc 130614 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 130613 gggggggtccgagccatcagtgagataccactctggaagagctagaattctaaccttgtg 130554 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130553 tcaggacgtacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 130494 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 ||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| Sbjct: 130493 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccggacggagattggccctcgag 130434 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 130433 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 130374 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130373 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 130314 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 130313 agggataacaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcga 130254 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 130253 tgtcggctct 130244 Score = 787 bits (397), Expect = 0.0 Identities = 466/490 (95%), Gaps = 1/490 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106145 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgttccct 106204 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 106205 gggattggctttgggcttttcctgcgcagcttaggtggaaggcgaagaaggcctccttcc 106264 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 106265 gggggggtccgagccatcagtgagataccactctggaagagctagaattctaaccttgtg 106324 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106325 tcaggacgtacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 106384 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 ||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| Sbjct: 106385 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccggacggagattggccctcgag 106444 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 106445 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 106504 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106505 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 106564 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 106565 agggataacaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcga 106624 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 106625 tgtcggctct 106634
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 787 bits (397), Expect = 0.0 Identities = 466/490 (95%), Gaps = 1/490 (0%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 130726 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgttccct 130667 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 130666 gggattggctttgggcttttcctgcgcagcttaggtggaaggcgaagaaggcctccttcc 130607 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 130606 gggggggtccgagccatcagtgagataccactctggaagagctagaattctaaccttgtg 130547 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130546 tcaggacgtacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 130487 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 ||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| Sbjct: 130486 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccggacggagattggccctcgag 130427 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 130426 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 130367 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130366 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 130307 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 130306 agggataacaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcga 130247 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 130246 tgtcggctct 130237 Score = 787 bits (397), Expect = 0.0 Identities = 466/490 (95%), Gaps = 1/490 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106143 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgttccct 106202 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 106203 gggattggctttgggcttttcctgcgcagcttaggtggaaggcgaagaaggcctccttcc 106262 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 106263 gggggggtccgagccatcagtgagataccactctggaagagctagaattctaaccttgtg 106322 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106323 tcaggacgtacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 106382 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 ||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| Sbjct: 106383 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccggacggagattggccctcgag 106442 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 106443 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 106502 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106503 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 106562 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 106563 agggataacaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcga 106622 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 106623 tgtcggctct 106632
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 781 bits (394), Expect = 0.0 Identities = 467/491 (95%), Gaps = 2/491 (0%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 129625 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgttccct 129566 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 129565 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcctccttcc 129506 Query: 121 nnnnnnnc-ccgagccatcagtgagataccactctggaagagctcggattctaaccttgt 179 ||||||||||||||||||||||||||||||||||| | ||||||||||||| Sbjct: 129505 ggggggggtccgagccatcagtgagataccactctggaagagctagaattctaaccttgt 129446 Query: 180 gtcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcct 238 ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129445 gtcaggacgtacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcct 129386 Query: 239 cccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcga 298 |||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||| Sbjct: 129385 cccaaaaggtaacggaggcgtgcaaaggtttcctcgggccggacggagattggccctcga 129326 Query: 299 gtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcg 358 ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 129325 gtgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcg 129266 Query: 359 gccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactc 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129265 gccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactc 129206 Query: 419 tagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcg 478 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 129205 tagggataacaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcg 129146 Query: 479 atgtcggctct 489 ||||||||||| Sbjct: 129145 atgtcggctct 129135 Score = 781 bits (394), Expect = 0.0 Identities = 467/491 (95%), Gaps = 2/491 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 105010 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgttccct 105069 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 105070 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcctccttcc 105129 Query: 121 nnnnnnnc-ccgagccatcagtgagataccactctggaagagctcggattctaaccttgt 179 ||||||||||||||||||||||||||||||||||| | ||||||||||||| Sbjct: 105130 ggggggggtccgagccatcagtgagataccactctggaagagctagaattctaaccttgt 105189 Query: 180 gtcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcct 238 ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105190 gtcaggacgtacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcct 105249 Query: 239 cccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcga 298 |||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||| Sbjct: 105250 cccaaaaggtaacggaggcgtgcaaaggtttcctcgggccggacggagattggccctcga 105309 Query: 299 gtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcg 358 ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 105310 gtgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcg 105369 Query: 359 gccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactc 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105370 gccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactc 105429 Query: 419 tagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcg 478 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 105430 tagggataacaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcg 105489 Query: 479 atgtcggctct 489 ||||||||||| Sbjct: 105490 atgtcggctct 105500
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 781 bits (394), Expect = 0.0 Identities = 468/493 (94%), Gaps = 4/493 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 2080 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgttccct 2139 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2140 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 2199 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaacc---tt 177 || |||||||||||||||||||||||||||||||| | ||||||||| || Sbjct: 2200 gggggggtccaagccatcagtgagataccactctggaagagctagaattctaaccctctt 2259 Query: 178 gtgtcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggc 236 ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2260 gtgtcaggacctacgggccaagggacagtctcaggtagacagtttctatggggcgtaggc 2319 Query: 237 ctcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctc 296 |||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||| Sbjct: 2320 ctcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccggacggagattggccctc 2379 Query: 297 gagtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagt 356 ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 2380 gagtgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagt 2439 Query: 357 cggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttac 416 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2440 cggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttac 2499 Query: 417 tctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacct 476 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 2500 tctagggataacaggctgatcttccccaagagctcacatcgacgggaaggtttggcacct 2559 Query: 477 cgatgtcggctct 489 ||||||||||||| Sbjct: 2560 cgatgtcggctct 2572
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 779 bits (393), Expect = 0.0 Identities = 466/490 (95%), Gaps = 2/490 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 2092 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgttccct 2151 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2152 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 2211 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 || |||||||||||||||||||||||||||||||| | ||||||||||||| Sbjct: 2212 gggggggtccaagccatcagtgagataccactctggaagagctagaattctaaccttgtt 2271 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2272 tcaggacctacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 2331 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 |||||||||||||||||||||||||| |||||||||||| |||||| ||||| ||||||| Sbjct: 2332 ccaaaaggtaacggaggcgtgcaaag-tttcctcgggccggacggagattggccctcgag 2390 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 2391 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 2450 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2451 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 2510 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 2511 agggataacaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcga 2570 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 2571 tgtcggctct 2580
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 779 bits (393), Expect = 0.0 Identities = 465/490 (94%), Gaps = 1/490 (0%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125825 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 125766 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| | Sbjct: 125765 gggattggctttgggcctttcctgcgcagcttaggtggagggcgaagaaggcctccttgc 125706 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 |||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 125705 gggggggcccgagccatcagtgagataccactctggaagagctagaattctaaccttgtg 125646 Query: 181 tcagacccg-cgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125645 tcagaacctacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 125586 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 ||||||||||||||||||| ||||||||||||||||||| |||||| ||||| ||||||| Sbjct: 125585 ccaaaaggtaacggaggcgcgcaaaggtttcctcgggccggacggagattggccctcgag 125526 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 || || |||| ||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 125525 tgtaagggcataagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 125466 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125465 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 125406 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 125405 agggataacaggctgatcttccccaagagttcacatcgacgggaaggtttggcacctcga 125346 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 125345 tgtcggctct 125336 Score = 779 bits (393), Expect = 0.0 Identities = 465/490 (94%), Gaps = 1/490 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109097 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 109156 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| | Sbjct: 109157 gggattggctttgggcctttcctgcgcagcttaggtggagggcgaagaaggcctccttgc 109216 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 |||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 109217 gggggggcccgagccatcagtgagataccactctggaagagctagaattctaaccttgtg 109276 Query: 181 tcagacccg-cgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109277 tcagaacctacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 109336 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 ||||||||||||||||||| ||||||||||||||||||| |||||| ||||| ||||||| Sbjct: 109337 ccaaaaggtaacggaggcgcgcaaaggtttcctcgggccggacggagattggccctcgag 109396 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 || || |||| ||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 109397 tgtaagggcataagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 109456 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109457 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 109516 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 109517 agggataacaggctgatcttccccaagagttcacatcgacgggaaggtttggcacctcga 109576 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 109577 tgtcggctct 109586
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 771 bits (389), Expect = 0.0 Identities = 465/490 (94%), Gaps = 2/490 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 2063 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgttccct 2122 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2123 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 2182 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 || |||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 2183 gggggggtccaagccatcagtgagataccactctggaagagctagaattctaaccttgtg 2242 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| ||| ||||||||||||||||||||| | |||||||||||||||||||||||||| Sbjct: 2243 tcaggacctacgggccaagggacagtctcagttggacagtttctatggggcgtaggcctc 2302 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 |||||||||||||||||||||||||| |||||||||||| |||||| ||||| ||||||| Sbjct: 2303 ccaaaaggtaacggaggcgtgcaaag-tttcctcgggccggacggagattggccctcgag 2361 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 2362 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 2421 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2422 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 2481 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 2482 agggataacaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcga 2541 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 2542 tgtcggctct 2551
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 771 bits (389), Expect = 0.0 Identities = 464/490 (94%), Gaps = 1/490 (0%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 128487 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgttccct 128428 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 128427 gggattggctttgggcttttcctgcgcagcttaggtggagggcgaagaaggcctccttcc 128368 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 128367 gggggggtccgagccatcagtgagataccactctggaagagctagaattctaaccttgtg 128308 Query: 181 tcagacccg-cgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| || ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128307 ccagaacctacggaccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 128248 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 || ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 128247 cccaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggagattggccctcgag 128188 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 128187 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 128128 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128127 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 128068 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 128067 agggataacaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcga 128008 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 128007 tgtcggctct 127998 Score = 771 bits (389), Expect = 0.0 Identities = 464/490 (94%), Gaps = 1/490 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 103969 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgttccct 104028 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 104029 gggattggctttgggcttttcctgcgcagcttaggtggagggcgaagaaggcctccttcc 104088 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 104089 gggggggtccgagccatcagtgagataccactctggaagagctagaattctaaccttgtg 104148 Query: 181 tcagacccg-cgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| || ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104149 ccagaacctacggaccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 104208 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 || ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 104209 cccaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggagattggccctcgag 104268 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 104269 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 104328 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104329 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 104388 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 104389 agggataacaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcga 104448 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 104449 tgtcggctct 104458
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 767 bits (387), Expect = 0.0 Identities = 467/492 (94%), Gaps = 3/492 (0%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 134896 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgttccct 134837 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 134836 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcctccttcc 134777 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 |||||||||||||||||||||||||||||||| ||| | |||||||||||||| Sbjct: 134776 gggggggcccgagccatcagtgagataccactctggaagggctagaattctaaccttgtg 134717 Query: 181 tcag-acccgcgg-gccaagggacagtctcaggtagacagtttctatggggcgtaggcct 238 |||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134716 tcaggacctacggtgccaagggacagtctcaggtagacagtttctatggggcgtaggcct 134657 Query: 239 cccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcga 298 |||||||||||||||||||| ||||||||||||||||||| |||||| ||||| |||||| Sbjct: 134656 cccaaaaggtaacggaggcgagcaaaggtttcctcgggccggacggagattggccctcga 134597 Query: 299 gtgcaaaggcag-aagggagcttgactgcaagactcacccgtcgagcagagacgaaagtc 357 |||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 134596 gtgcaaaggcaggaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtc 134537 Query: 358 ggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttact 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134536 ggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttact 134477 Query: 418 ctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctc 477 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 134476 ctagggataacaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctc 134417 Query: 478 gatgtcggctct 489 |||||||||||| Sbjct: 134416 gatgtcggctct 134405 Score = 767 bits (387), Expect = 0.0 Identities = 467/492 (94%), Gaps = 3/492 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 108661 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgttccct 108720 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 108721 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcctccttcc 108780 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 |||||||||||||||||||||||||||||||| ||| | |||||||||||||| Sbjct: 108781 gggggggcccgagccatcagtgagataccactctggaagggctagaattctaaccttgtg 108840 Query: 181 tcag-acccgcgg-gccaagggacagtctcaggtagacagtttctatggggcgtaggcct 238 |||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108841 tcaggacctacggtgccaagggacagtctcaggtagacagtttctatggggcgtaggcct 108900 Query: 239 cccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcga 298 |||||||||||||||||||| ||||||||||||||||||| |||||| ||||| |||||| Sbjct: 108901 cccaaaaggtaacggaggcgagcaaaggtttcctcgggccggacggagattggccctcga 108960 Query: 299 gtgcaaaggcag-aagggagcttgactgcaagactcacccgtcgagcagagacgaaagtc 357 |||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 108961 gtgcaaaggcaggaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtc 109020 Query: 358 ggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttact 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109021 ggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttact 109080 Query: 418 ctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctc 477 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 109081 ctagggataacaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctc 109140 Query: 478 gatgtcggctct 489 |||||||||||| Sbjct: 109141 gatgtcggctct 109152
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 763 bits (385), Expect = 0.0 Identities = 465/490 (94%), Gaps = 3/490 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 2074 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgttccct 2133 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2134 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 2193 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 || |||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 2194 gggggggtccaagccatcagtgagataccactctggaagagctagaattctaaccttgtg 2253 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| ||| |||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct: 2254 tcaggacctacgggccaagggacagtctcaggtagacagtttgtatggggcgtag-cctc 2312 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 |||||||||||||||||||||||||| |||||||||||| |||||| ||||| ||||||| Sbjct: 2313 ccaaaaggtaacggaggcgtgcaaag-tttcctcgggccggacggagattggccctcgag 2371 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 2372 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 2431 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2432 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 2491 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 2492 agggataacaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcga 2551 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 2552 tgtcggctct 2561
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 757 bits (382), Expect = 0.0 Identities = 465/491 (94%), Gaps = 3/491 (0%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 140837 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgttccct 140778 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 ||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||| Sbjct: 140777 gggattgtctttgggcccttcctgcgcagcttaggtggaaggcgaagaaggcctccttcc 140718 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 || ||||||||||||||||||||||||||||| ||| | |||||||||| ||| Sbjct: 140717 gggggggcctgagccatcagtgagataccactctggaagggctagaattctaacct-gtg 140659 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140658 tcaggacctacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 140599 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcggg-ccagacggacattggtcctcga 298 ||||||||||||||||| ||||||||||||||||||| || |||||| ||||| |||||| Sbjct: 140598 ccaaaaggtaacggaggtgtgcaaaggtttcctcggggccggacggagattggccctcga 140539 Query: 299 gtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcg 358 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 140538 gtgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagagacgaaagtcg 140479 Query: 359 gccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactc 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140478 gccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactc 140419 Query: 419 tagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcg 478 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 140418 tagggataacaggctgatcttccccaagagttcacatcgacgggaaggtttggcacctcg 140359 Query: 479 atgtcggctct 489 ||||||||||| Sbjct: 140358 atgtcggctct 140348 Score = 757 bits (382), Expect = 0.0 Identities = 465/491 (94%), Gaps = 3/491 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 112491 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgttccct 112550 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 ||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||| Sbjct: 112551 gggattgtctttgggcccttcctgcgcagcttaggtggaaggcgaagaaggcctccttcc 112610 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 || ||||||||||||||||||||||||||||| ||| | |||||||||| ||| Sbjct: 112611 gggggggcctgagccatcagtgagataccactctggaagggctagaattctaacct-gtg 112669 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112670 tcaggacctacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 112729 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcggg-ccagacggacattggtcctcga 298 ||||||||||||||||| ||||||||||||||||||| || |||||| ||||| |||||| Sbjct: 112730 ccaaaaggtaacggaggtgtgcaaaggtttcctcggggccggacggagattggccctcga 112789 Query: 299 gtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcg 358 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 112790 gtgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagagacgaaagtcg 112849 Query: 359 gccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactc 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112850 gccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactc 112909 Query: 419 tagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcg 478 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 112910 tagggataacaggctgatcttccccaagagttcacatcgacgggaaggtttggcacctcg 112969 Query: 479 atgtcggctct 489 ||||||||||| Sbjct: 112970 atgtcggctct 112980
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 755 bits (381), Expect = 0.0 Identities = 462/490 (94%), Gaps = 1/490 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88295 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 88354 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 ||||||| ||||||| ||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 88355 gggattgtctttgggttcttcttgcgcagcttaggtggagggcgaagaaggcccccttcc 88414 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 || |||||| |||||||||||||||||||||||||| | |||||||||||| | Sbjct: 88415 gggggggcctgagccaccagtgagataccactctggaagagctagaattctaaccttgcg 88474 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88475 tcaggacctacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 88534 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 ||||||||||||||||||||||||||||||||||||||| |||||| || || ||||||| Sbjct: 88535 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccggacggaaatcggccctcgag 88594 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 88595 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 88654 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88655 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 88714 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 88715 agggataacaggctgatcttccccaagagttcacatcgacgggaaggtttggcacctcga 88774 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 88775 tgtcggctct 88784
>dbj|AK060185.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-C09, full insert sequence Length = 886 Score = 755 bits (381), Expect = 0.0 Identities = 395/402 (98%) Strand = Plus / Plus Query: 88 agcttaggtggaaggcgaagaaggcccccttccnnnnnnncccgagccatcagtgagata 147 ||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2 agcttaggtggaaggcgaagaaggcccccttccgggggggcccgagccatcagtgagata 61 Query: 148 ccactctggaagagctcggattctaaccttgtgtcagacccgcgggccaagggacagtct 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 ccactctggaagagctcggattctaaccttgtgtcagacccgcgggccaagggacagtct 121 Query: 208 caggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcgtgcaaaggt 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122 caggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcgtgcaaaggt 181 Query: 268 ttcctcgggccagacggacattggtcctcgagtgcaaaggcagaagggagcttgactgca 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 ttcctcgggccagacggacattggtcctcgagtgcaaaggcagaagggagcttgactgca 241 Query: 328 agactcacccgtcgagcagagacgaaagtcggccttagtgatccgacggtgccgagtgga 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 agactcacccgtcgagcagagacgaaagtcggccttagtgatccgacggtgccgagtgga 301 Query: 388 agggccgtcgctcaacggataaaagttactctagggataacaggctgatcttccccaaga 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 302 agggccgtcgctcaacggataaaagttactctagggataacaggctgatcttccccaaga 361 Query: 448 gtccacatcgacgggaaggtttggcacctcgatgtcggctct 489 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 362 gtccacatcgacgggaaggtttggcacctcgatgtcggctct 403
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 755 bits (381), Expect = 0.0 Identities = 462/490 (94%), Gaps = 1/490 (0%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 129825 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgtttcct 129766 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||| |||||||||||||||||||||| ||| ||||||||| ||||| Sbjct: 129765 gggattggctttgggcttttcctgcgcagcttaggtggagggcaaagaaggcctccttct 129706 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 || ||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 129705 gggggggccagagccatcagtgagataccactctggaagagctagaattctaaccttgtg 129646 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 ||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129645 ccaggacctacgggccgagggacagtctcaggtagacagtttctatggggcgtaggcctc 129586 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 129585 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggagattggccctcgag 129526 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 129525 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 129466 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129465 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 129406 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 129405 agggataacaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcga 129346 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 129345 tgtcggctct 129336 Score = 755 bits (381), Expect = 0.0 Identities = 462/490 (94%), Gaps = 1/490 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 105569 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgtttcct 105628 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||| |||||||||||||||||||||| ||| ||||||||| ||||| Sbjct: 105629 gggattggctttgggcttttcctgcgcagcttaggtggagggcaaagaaggcctccttct 105688 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 || ||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 105689 gggggggccagagccatcagtgagataccactctggaagagctagaattctaaccttgtg 105748 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 ||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105749 ccaggacctacgggccgagggacagtctcaggtagacagtttctatggggcgtaggcctc 105808 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 105809 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggagattggccctcgag 105868 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 105869 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 105928 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105929 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 105988 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 105989 agggataacaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcga 106048 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 106049 tgtcggctct 106058
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 755 bits (381), Expect = 0.0 Identities = 462/490 (94%), Gaps = 1/490 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90383 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 90442 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 ||||||| ||||||| ||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 90443 gggattgtctttgggttcttcttgcgcagcttaggtggagggcgaagaaggcccccttcc 90502 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 || |||||| |||||||||||||||||||||||||| | |||||||||||| | Sbjct: 90503 gggggggcctgagccaccagtgagataccactctggaagagctagaattctaaccttgcg 90562 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90563 tcaggacctacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 90622 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 ||||||||||||||||||||||||||||||||||||||| |||||| || || ||||||| Sbjct: 90623 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccggacggaaatcggccctcgag 90682 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 90683 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 90742 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90743 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 90802 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 90803 agggataacaggctgatcttccccaagagttcacatcgacgggaaggtttggcacctcga 90862 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 90863 tgtcggctct 90872
>emb|X06235.1|MIOBRRNP Oenothera berteriana mitDNA with part of plastid rRNA operon Length = 2900 Score = 753 bits (380), Expect = 0.0 Identities = 462/490 (94%), Gaps = 5/490 (1%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1651 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 1710 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 1711 gggattggctttgggcctttcctgcgcaccttaggtggaaggcgaagaaggcctccttcc 1770 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 |||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 1771 gggggggcccgagccatcagtgagataccactctggaagagctagaattctaaccttgtg 1830 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1831 tcaggacctacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 1890 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 | ||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| Sbjct: 1891 cg----ggtaacggaggcgtgcaaaggtttcctcgggccggacggagattggccctcgag 1946 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 1947 tgcaaaggcagaagggtgcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 2006 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 2007 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagtgactct 2066 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 2067 agggataacaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcga 2126 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 2127 tgtcggctct 2136
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 749 bits (378), Expect = 0.0 Identities = 460/489 (94%), Gaps = 3/489 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 6263 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgttccct 6322 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 ||||||||||||| || |||||||||||||||||||||||||| ||||||||| |||||| Sbjct: 6323 gggattggctttgagcttttcctgcgcagcttaggtggaaggcaaagaaggcctccttcc 6382 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 | |||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 6383 gggggggctcgagccatcagtgagataccactctggaagagctagaattctaaccttgtg 6442 Query: 181 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 240 ||| | | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6443 ccagtacaga---ccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 6499 Query: 241 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 300 ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 6500 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggagattggccctcgagt 6559 Query: 301 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 360 ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| Sbjct: 6560 gcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcggc 6619 Query: 361 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6620 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 6679 Query: 421 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 480 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 6680 gggataacaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcgat 6739 Query: 481 gtcggctct 489 ||||||||| Sbjct: 6740 gtcggctct 6748
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 749 bits (378), Expect = 0.0 Identities = 458/483 (94%), Gaps = 3/483 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 2058 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgttccct 2117 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||| Sbjct: 2118 gggattggctttgggcctttcctgcg-agcttaggtggagggcgaagatggcccccttcc 2176 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 || ||||| ||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 2177 gggggggcctgagccgtcagtgagataccactctggaagagctagaattctaaccttgtg 2236 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2237 tcaggacctacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 2296 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 2297 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggagattggccctcgag 2356 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 2357 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 2416 Query: 360 ccttagtgatccgacggtgccgag-tggaagggccgtcgctcaacggataaaagttactc 418 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 2417 ccttagtgatccgacggtgccgagttggaagggccgtcgctcaacggataaaagttactc 2476 Query: 419 tagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcg 478 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 2477 tagggataacaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcg 2536 Query: 479 atg 481 ||| Sbjct: 2537 atg 2539
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 749 bits (378), Expect = 0.0 Identities = 460/489 (94%), Gaps = 3/489 (0%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 21662 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgttccct 21603 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 ||||||||||||| || |||||||||||||||||||||||||| ||||||||| |||||| Sbjct: 21602 gggattggctttgagcttttcctgcgcagcttaggtggaaggcaaagaaggcctccttcc 21543 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 | |||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 21542 gggggggctcgagccatcagtgagataccactctggaagagctagaattctaaccttgtg 21483 Query: 181 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 240 ||| | | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21482 ccagtacaga---ccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 21426 Query: 241 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 300 ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 21425 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggagattggccctcgagt 21366 Query: 301 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 360 ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| Sbjct: 21365 gcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcggc 21306 Query: 361 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21305 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 21246 Query: 421 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 480 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 21245 gggataacaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcgat 21186 Query: 481 gtcggctct 489 ||||||||| Sbjct: 21185 gtcggctct 21177
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 749 bits (378), Expect = 0.0 Identities = 463/491 (94%), Gaps = 2/491 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2084 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 2143 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2144 gggattggctttgggcttttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 2203 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 |||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 2204 gggggggcccgagccatcagtgagataccactctggaagagctagaattctaaccttgtg 2263 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 2264 tcaggacctacgggccaagggacagtctcaggtagacagtttctatggggggtaggcctc 2323 Query: 240 ccaaaaggtaacggaggcgtgcaaa-ggtttcctcgggccagacggacattggtcctcga 298 ||||||||||||| || || |||| |||||||||||||| |||||| ||||| ||| || Sbjct: 2324 ccaaaaggtaacgatggagtccaaaaggtttcctcgggccggacggagattggccctaga 2383 Query: 299 gtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcg 358 ||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||| Sbjct: 2384 gtgcaaaggcagaagggagcttgactgcaagacccacccttcgagcagggacgaaagtcg 2443 Query: 359 gccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactc 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2444 gccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactc 2503 Query: 419 tagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcg 478 |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| Sbjct: 2504 tagggataacaggctgatgttccccaagagttcacatcgacgggaaggtttggcacctcg 2563 Query: 479 atgtcggctct 489 ||||||||||| Sbjct: 2564 atgtcggctct 2574
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 747 bits (377), Expect = 0.0 Identities = 464/490 (94%), Gaps = 4/490 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 2105 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgttccct 2164 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2165 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 2224 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 || |||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 2225 gggggggtccaagccatcagtgagataccactctggaagagctagaattctaaccttgtg 2284 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| ||| ||||||||||||||||||||| ||||||||||||||||||||||| | || Sbjct: 2285 tcaggacctacgggccaagggacagtctcag-tagacagtttctatggggcgtag-cttc 2342 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 |||||||||||||||||||||||||| |||||||||||| |||||| ||||| ||||||| Sbjct: 2343 ccaaaaggtaacggaggcgtgcaaag-tttcctcgggccggacggagattggccctcgag 2401 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 2402 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 2461 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2462 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 2521 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 2522 agggataacaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcga 2581 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 2582 tgtcggctct 2591
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 745 bits (376), Expect = 0.0 Identities = 462/490 (94%), Gaps = 6/490 (1%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 6549 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgttccct 6608 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| Sbjct: 6609 gggattggctttgggcttttcctgcgcagcttaggtggaaggcaaagaaggcccccttcc 6668 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 | |||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 6669 gggggggctcgagccatcagtgagataccactctggaagagctagaattctaaccttgtg 6728 Query: 181 tca-gacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 || ||| | ||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 6729 ccaagaca----gaccaagggacagtctcaggtagacagtttctatggggcgtaggc-tc 6783 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 6784 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggagattggccctcgag 6843 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 6844 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 6903 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6904 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 6963 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 6964 agggataacaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcga 7023 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 7024 tgtcggctct 7033
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 745 bits (376), Expect = 0.0 Identities = 462/490 (94%), Gaps = 6/490 (1%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 6549 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgttccct 6608 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| Sbjct: 6609 gggattggctttgggcttttcctgcgcagcttaggtggaaggcaaagaaggcccccttcc 6668 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 | |||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 6669 gggggggctcgagccatcagtgagataccactctggaagagctagaattctaaccttgtg 6728 Query: 181 tca-gacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 || ||| | ||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 6729 ccaagaca----gaccaagggacagtctcaggtagacagtttctatggggcgtaggc-tc 6783 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 6784 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggagattggccctcgag 6843 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 6844 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 6903 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6904 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 6963 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 6964 agggataacaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcga 7023 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 7024 tgtcggctct 7033
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 724 bits (365), Expect = 0.0 Identities = 458/490 (93%), Gaps = 1/490 (0%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 144497 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 144438 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 144437 gggattggctttgggctcttcttgcgcagcttaggtggaaggcgaggaaggcccccttcc 144378 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 | |||||||||||||| |||||||||| |||||||| | |||||||||||||| Sbjct: 144377 gggggggctcgagccatcagtgaaataccactctagaagagctagaattctaaccttgtg 144318 Query: 181 tca-gacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 ||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 144317 tcaagacttacgggccaagggacagtcttaggtagacagtttctatggggcgtaggcctc 144258 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 |||||||||||||||||||||||||||||||||| ||| |||||| || | ||||||| Sbjct: 144257 ccaaaaggtaacggaggcgtgcaaaggtttcctcaggctggacggaaatcagccctcgag 144198 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 144197 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 144138 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 144137 ccttagtgatccgacggtgccaagtggaagggccgtcgctcaacggataaaagttactct 144078 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 144077 agggataacaggctgatcttccccaagagttcacatcgacgggaaggtttggcacctcga 144018 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 144017 tgtcggctct 144008 Score = 724 bits (365), Expect = 0.0 Identities = 458/490 (93%), Gaps = 1/490 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113965 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 114024 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 114025 gggattggctttgggctcttcttgcgcagcttaggtggaaggcgaggaaggcccccttcc 114084 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 | |||||||||||||| |||||||||| |||||||| | |||||||||||||| Sbjct: 114085 gggggggctcgagccatcagtgaaataccactctagaagagctagaattctaaccttgtg 114144 Query: 181 tca-gacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 ||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 114145 tcaagacttacgggccaagggacagtcttaggtagacagtttctatggggcgtaggcctc 114204 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 |||||||||||||||||||||||||||||||||| ||| |||||| || | ||||||| Sbjct: 114205 ccaaaaggtaacggaggcgtgcaaaggtttcctcaggctggacggaaatcagccctcgag 114264 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 114265 tgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 114324 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 114325 ccttagtgatccgacggtgccaagtggaagggccgtcgctcaacggataaaagttactct 114384 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 114385 agggataacaggctgatcttccccaagagttcacatcgacgggaaggtttggcacctcga 114444 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 114445 tgtcggctct 114454
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 716 bits (361), Expect = 0.0 Identities = 457/490 (93%), Gaps = 1/490 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2053 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 2112 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 2113 gggattggctttgggctcttcttgcgcagcttaggtggaaggcgaagaaggcccccttcc 2172 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 | |||||||||||||| |||||||||| |||||||| | |||||||||||||| Sbjct: 2173 gggggggctcgagccatcagtgaaataccactctagaagagctagaattctaaccttgtg 2232 Query: 181 tca-gacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2233 tcaagacttacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 2292 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 |||||||||||||||||||||||||||||||||| ||| |||||| || | | ||||| Sbjct: 2293 ccaaaaggtaacggaggcgtgcaaaggtttcctcaggctggacggaaatcagccttcgag 2352 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 || ||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 2353 tgtaaaggcaaaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcgg 2412 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 2413 ccttagtgatccgacggtgccaagtggaagggccgtcgctcaacggataaaagttactct 2472 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 2473 agggataacaggctgatcttccccaagagttcacatcgacgggaaggtttggcacctcga 2532 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 2533 tgtcggctct 2542
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 714 bits (360), Expect = 0.0 Identities = 463/493 (93%), Gaps = 5/493 (1%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2114 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 2173 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2174 gggattggctttgggcttttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 2233 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 |||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 2234 gggggggcccgagccatcagtgagataccactctggaagagctagaattctaaccttgtg 2293 Query: 181 tcag-acccgcgggccaagggacagtct-caggtagacagtttctatggggcgtaggcc- 237 |||| ||| |||||||||||||||||| |||||||||||||| || |||||||||||| Sbjct: 2294 tcaggacctacgggccaagggacagtcttcaggtagacagtttgta-ggggcgtaggccc 2352 Query: 238 tcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcg 297 ||||||||||||||||||||||| ||||||||| ||||||| |||||| ||||| ||| | Sbjct: 2353 tcccaaaaggtaacggaggcgtgaaaaggtttcatcgggccggacggagattggccctag 2412 Query: 298 agtgcaaaggcagaaggg-agcttgactgcaagactcacccgtcgagcagagacgaaagt 356 |||||||||||||||||| |||||||||||||||| |||||||||||||| || |||||| Sbjct: 2413 agtgcaaaggcagaaggggagcttgactgcaagacccacccgtcgagcagggaagaaagt 2472 Query: 357 cggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttac 416 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2473 cggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttac 2532 Query: 417 tctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacct 476 | ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 2533 tatagggataacaggctgatcttccccaagagttcacatcgacgggaaggtttggcacct 2592 Query: 477 cgatgtcggctct 489 |||||||||||| Sbjct: 2593 ggatgtcggctct 2605
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 710 bits (358), Expect = 0.0 Identities = 361/362 (99%) Strand = Plus / Plus Query: 128 cccgagccatcagtgagataccactctggaagagctcggattctaaccttgtgtcagacc 187 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33580908 cccgagccatcagtgagataccactctggaagagctcggattctaaccttgtgtcagacc 33580967 Query: 188 cgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaagg 247 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33580968 cgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaagg 33581027 Query: 248 taacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaagg 307 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 33581028 taacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcaagtgcaaagg 33581087 Query: 308 cagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtg 367 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33581088 cagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtg 33581147 Query: 368 atccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactctagggataa 427 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33581148 atccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactctagggataa 33581207 Query: 428 caggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgatgtcggct 487 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33581208 caggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgatgtcggct 33581267 Query: 488 ct 489 || Sbjct: 33581268 ct 33581269 Score = 85.7 bits (43), Expect = 1e-13 Identities = 85/99 (85%) Strand = Plus / Minus Query: 338 gtcgagcagagacgaaagtcggccttagtgatccgacggtgccgagtggaagggccgtcg 397 ||||| |||||||||||||||||| |||||||||| || ||| |||||||||| ||| Sbjct: 33580329 gtcgaacagagacgaaagtcggccatagtgatccgggagtcccgtgtggaagggctctcg 33580270 Query: 398 ctcaacggataaaagttactctagggataacaggctgat 436 |||||||||| |||| ||| | |||||||||||||||| Sbjct: 33580269 ctcaacggatcaaaggtacgccggggataacaggctgat 33580231
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 710 bits (358), Expect = 0.0 Identities = 361/362 (99%) Strand = Plus / Plus Query: 128 cccgagccatcagtgagataccactctggaagagctcggattctaaccttgtgtcagacc 187 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126105 cccgagccatcagtgagataccactctggaagagctcggattctaaccttgtgtcagacc 126164 Query: 188 cgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaagg 247 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126165 cgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaagg 126224 Query: 248 taacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaagg 307 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 126225 taacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcaagtgcaaagg 126284 Query: 308 cagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtg 367 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126285 cagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtg 126344 Query: 368 atccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactctagggataa 427 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126345 atccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactctagggataa 126404 Query: 428 caggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgatgtcggct 487 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126405 caggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgatgtcggct 126464 Query: 488 ct 489 || Sbjct: 126465 ct 126466 Score = 85.7 bits (43), Expect = 1e-13 Identities = 85/99 (85%) Strand = Plus / Minus Query: 338 gtcgagcagagacgaaagtcggccttagtgatccgacggtgccgagtggaagggccgtcg 397 ||||| |||||||||||||||||| |||||||||| || ||| |||||||||| ||| Sbjct: 125526 gtcgaacagagacgaaagtcggccatagtgatccgggagtcccgtgtggaagggctctcg 125467 Query: 398 ctcaacggataaaagttactctagggataacaggctgat 436 |||||||||| |||| ||| | |||||||||||||||| Sbjct: 125466 ctcaacggatcaaaggtacgccggggataacaggctgat 125428
>gb|AY251296.1| Stellaria longipes 23S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 480 Score = 690 bits (348), Expect = 0.0 Identities = 412/433 (95%), Gaps = 2/433 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 49 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 108 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 168 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||| ||||||||||||||||||||||| | |||||||||||||| Sbjct: 169 gggggggcccgagccatctgtgagataccactctggaagagcaagaattctaaccttgtg 228 Query: 181 tcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 229 tcaggacctacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 288 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 ||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| Sbjct: 289 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccggacggagattggccctcgag 348 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||| ||||||||| |||| ||||||| Sbjct: 349 tgcaaaggcagaagggagcttgactgcaagacccaccagtcgagcagggacg-aagtcgg 407 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 408 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 467 Query: 420 agggataacaggc 432 ||||||||||||| Sbjct: 468 agggataacaggc 480
>dbj|AK059158.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-D02, full insert sequence Length = 1502 Score = 690 bits (348), Expect = 0.0 Identities = 348/348 (100%) Strand = Plus / Plus Query: 142 gagataccactctggaagagctcggattctaaccttgtgtcagacccgcgggccaaggga 201 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gagataccactctggaagagctcggattctaaccttgtgtcagacccgcgggccaaggga 60 Query: 202 cagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcgtgc 261 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcgtgc 120 Query: 262 aaaggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaagggagcttg 321 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 aaaggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaagggagcttg 180 Query: 322 actgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacggtgccg 381 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 actgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacggtgccg 240 Query: 382 agtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatcttcc 441 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 agtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatcttcc 300 Query: 442 ccaagagtccacatcgacgggaaggtttggcacctcgatgtcggctct 489 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ccaagagtccacatcgacgggaaggtttggcacctcgatgtcggctct 348
>dbj|AK063570.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-G05, full insert sequence Length = 1023 Score = 686 bits (346), Expect = 0.0 Identities = 346/346 (100%) Strand = Plus / Plus Query: 144 gataccactctggaagagctcggattctaaccttgtgtcagacccgcgggccaagggaca 203 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gataccactctggaagagctcggattctaaccttgtgtcagacccgcgggccaagggaca 60 Query: 204 gtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcgtgcaa 263 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcgtgcaa 120 Query: 264 aggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaagggagcttgac 323 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 aggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaagggagcttgac 180 Query: 324 tgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacggtgccgag 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacggtgccgag 240 Query: 384 tggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatcttcccc 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 tggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatcttcccc 300 Query: 444 aagagtccacatcgacgggaaggtttggcacctcgatgtcggctct 489 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 aagagtccacatcgacgggaaggtttggcacctcgatgtcggctct 346
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 684 bits (345), Expect = 0.0 Identities = 453/490 (92%), Gaps = 1/490 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5941 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 6000 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 6001 gggattggctttgggcttttcctgcgcagcttaggtggaaggcgaagaaggcctccttct 6060 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 | |||||||||||||| |||||||||| |||||||| | |||||||||||||| Sbjct: 6061 gggggggctcgagccatcagtgaaataccactctagaagagctagaattctaaccttgtg 6120 Query: 181 tca-gacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 ||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6121 tcaagacttacgggctaagggacagtctcaggtagacagtttctatggggcgtaggcctc 6180 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 | |||||||||||||||||||||||||||||||| ||| |||||| || | | ||||| Sbjct: 6181 ctaaaaggtaacggaggcgtgcaaaggtttcctcaggctggacggaaatcagccttcgag 6240 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| || ||||||||| |||||||||||| Sbjct: 6241 tgcaaaggcagaagggagcttgactgcaagacctacttgtcgagcagggacgaaagtcgg 6300 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 6301 ccttagtgatccgacggtgccaagtggaagggccgtcgctcaacggataaaagttactct 6360 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| Sbjct: 6361 agggataacaggctgatctttcccaagagttcacatcgacgggaaggtttggcacctcga 6420 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 6421 tgtcggctct 6430
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 684 bits (345), Expect = 0.0 Identities = 453/490 (92%), Gaps = 1/490 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2051 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 2110 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 2111 gggattggctttgggcttttcctgcgcagcttaggtggaaggcgaagaaggcctccttct 2170 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 | |||||||||||||| |||||||||| |||||||| | |||||||||||||| Sbjct: 2171 gggggggctcgagccatcagtgaaataccactctagaagagctagaattctaaccttgtg 2230 Query: 181 tca-gacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 ||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2231 tcaagacttacgggctaagggacagtctcaggtagacagtttctatggggcgtaggcctc 2290 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 | |||||||||||||||||||||||||||||||| ||| |||||| || | | ||||| Sbjct: 2291 ctaaaaggtaacggaggcgtgcaaaggtttcctcaggctggacggaaatcagccttcgag 2350 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| || ||||||||| |||||||||||| Sbjct: 2351 tgcaaaggcagaagggagcttgactgcaagacctacttgtcgagcagggacgaaagtcgg 2410 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 2411 ccttagtgatccgacggtgccaagtggaagggccgtcgctcaacggataaaagttactct 2470 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| Sbjct: 2471 agggataacaggctgatctttcccaagagttcacatcgacgggaaggtttggcacctcga 2530 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 2531 tgtcggctct 2540
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 684 bits (345), Expect = 0.0 Identities = 453/490 (92%), Gaps = 1/490 (0%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149194 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 149135 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 149134 gggattggctttgggcttttcctgcgcagcttaggtggaaggcgaagaaggcctccttct 149075 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 | |||||||||||||| |||||||||| |||||||| | |||||||||||||| Sbjct: 149074 gggggggctcgagccatcagtgaaataccactctagaagagctagaattctaaccttgtg 149015 Query: 181 tca-gacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 ||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149014 tcaagacttacgggctaagggacagtctcaggtagacagtttctatggggcgtaggcctc 148955 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 | |||||||||||||||||||||||||||||||| ||| |||||| || | | ||||| Sbjct: 148954 ctaaaaggtaacggaggcgtgcaaaggtttcctcaggctggacggaaatcagccttcgag 148895 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| || ||||||||| |||||||||||| Sbjct: 148894 tgcaaaggcagaagggagcttgactgcaagacctacttgtcgagcagggacgaaagtcgg 148835 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 148834 ccttagtgatccgacggtgccaagtggaagggccgtcgctcaacggataaaagttactct 148775 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| Sbjct: 148774 agggataacaggctgatctttcccaagagttcacatcgacgggaaggtttggcacctcga 148715 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 148714 tgtcggctct 148705 Score = 684 bits (345), Expect = 0.0 Identities = 453/490 (92%), Gaps = 1/490 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119472 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 119531 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 119532 gggattggctttgggcttttcctgcgcagcttaggtggaaggcgaagaaggcctccttct 119591 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 | |||||||||||||| |||||||||| |||||||| | |||||||||||||| Sbjct: 119592 gggggggctcgagccatcagtgaaataccactctagaagagctagaattctaaccttgtg 119651 Query: 181 tca-gacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 ||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119652 tcaagacttacgggctaagggacagtctcaggtagacagtttctatggggcgtaggcctc 119711 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 | |||||||||||||||||||||||||||||||| ||| |||||| || | | ||||| Sbjct: 119712 ctaaaaggtaacggaggcgtgcaaaggtttcctcaggctggacggaaatcagccttcgag 119771 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| || ||||||||| |||||||||||| Sbjct: 119772 tgcaaaggcagaagggagcttgactgcaagacctacttgtcgagcagggacgaaagtcgg 119831 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119832 ccttagtgatccgacggtgccaagtggaagggccgtcgctcaacggataaaagttactct 119891 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| Sbjct: 119892 agggataacaggctgatctttcccaagagttcacatcgacgggaaggtttggcacctcga 119951 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 119952 tgtcggctct 119961
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 684 bits (345), Expect = 0.0 Identities = 453/490 (92%), Gaps = 1/490 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2051 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 2110 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 2111 gggattggctttgggcttttcctgcgcagcttaggtggaaggcgaagaaggcctccttct 2170 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 | |||||||||||||| |||||||||| |||||||| | |||||||||||||| Sbjct: 2171 gggggggctcgagccatcagtgaaataccactctagaagagctagaattctaaccttgtg 2230 Query: 181 tca-gacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 ||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2231 tcaagacttacgggctaagggacagtctcaggtagacagtttctatggggcgtaggcctc 2290 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 | |||||||||||||||||||||||||||||||| ||| |||||| || | | ||||| Sbjct: 2291 ctaaaaggtaacggaggcgtgcaaaggtttcctcaggctggacggaaatcagccttcgag 2350 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| || ||||||||| |||||||||||| Sbjct: 2351 tgcaaaggcagaagggagcttgactgcaagacctacttgtcgagcagggacgaaagtcgg 2410 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 2411 ccttagtgatccgacggtgccaagtggaagggccgtcgctcaacggataaaagttactct 2470 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| Sbjct: 2471 agggataacaggctgatctttcccaagagttcacatcgacgggaaggtttggcacctcga 2530 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 2531 tgtcggctct 2540
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 682 bits (344), Expect = 0.0 Identities = 452/489 (92%), Gaps = 1/489 (0%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 116098 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 116039 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 116038 gggattggctttgggctcttcttgcgcagcttaggtggaaggcgaagaaggcccccttcc 115979 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 | |||||||||||||| |||||||||| |||||||| | |||||||||||||| Sbjct: 115978 gggggggctcgagccatcagtgaaataccactctagaagagctagaattctaaccttgtg 115919 Query: 181 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 240 ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115918 tca-atttacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 115860 Query: 241 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 300 ||||||||||||||||||||||||||||||||| ||| |||||| || | | |||||| Sbjct: 115859 caaaaggtaacggaggcgtgcaaaggtttcctcaggctggacggaaatcagccttcgagt 115800 Query: 301 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 360 | ||||||| ||||||||||||||||||||| ||| ||||||||| ||||||||||||| Sbjct: 115799 gtaaaggcaaaagggagcttgactgcaagacctaccagtcgagcagggacgaaagtcggc 115740 Query: 361 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 420 ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 115739 cttagtgatccgacggtaccaagtggaagggccgtcgctcaacggataaaagttactcta 115680 Query: 421 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 480 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 115679 gggataacaggctgatcttccccaagagttcacatcgacgggaaggtttggcacctcgat 115620 Query: 481 gtcggctct 489 ||||||||| Sbjct: 115619 gtcggctct 115611 Score = 682 bits (344), Expect = 0.0 Identities = 452/489 (92%), Gaps = 1/489 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92004 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 92063 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 92064 gggattggctttgggctcttcttgcgcagcttaggtggaaggcgaagaaggcccccttcc 92123 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 | |||||||||||||| |||||||||| |||||||| | |||||||||||||| Sbjct: 92124 gggggggctcgagccatcagtgaaataccactctagaagagctagaattctaaccttgtg 92183 Query: 181 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 240 ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92184 tca-atttacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 92242 Query: 241 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 300 ||||||||||||||||||||||||||||||||| ||| |||||| || | | |||||| Sbjct: 92243 caaaaggtaacggaggcgtgcaaaggtttcctcaggctggacggaaatcagccttcgagt 92302 Query: 301 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 360 | ||||||| ||||||||||||||||||||| ||| ||||||||| ||||||||||||| Sbjct: 92303 gtaaaggcaaaagggagcttgactgcaagacctaccagtcgagcagggacgaaagtcggc 92362 Query: 361 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 420 ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 92363 cttagtgatccgacggtaccaagtggaagggccgtcgctcaacggataaaagttactcta 92422 Query: 421 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 480 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 92423 gggataacaggctgatcttccccaagagttcacatcgacgggaaggtttggcacctcgat 92482 Query: 481 gtcggctct 489 ||||||||| Sbjct: 92483 gtcggctct 92491
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 678 bits (342), Expect = 0.0 Identities = 451/489 (92%), Gaps = 3/489 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2051 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 2110 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 2111 gggattggctttgggctcttcttgcgcagcttaggtggaaggcgaagaaggccctcttcc 2170 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 | |||||||||||||| |||||||||| |||||||| | ||||||||||||| Sbjct: 2171 gggagggctcgagccatcagtgaaataccactctagaagagctagaattctaaccttgta 2230 Query: 181 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 240 ||| | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2231 tcaatac---gggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 2287 Query: 241 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 300 ||||||||||||||||||||||||||||||||| ||| |||||| || | | |||||| Sbjct: 2288 caaaaggtaacggaggcgtgcaaaggtttcctcaggctggacggaaatcagccttcgagt 2347 Query: 301 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 360 | ||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 2348 gtaaaggcaaaagggagcttgactgcaagacctacccgtcgagcagggacgaaagtcggc 2407 Query: 361 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 420 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 2408 cttagtgatccgacggtaccgagtggaagggccgtcgctcaacggataaaagttactcta 2467 Query: 421 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 480 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 2468 gggataacaggctgatcttccccaagagttcacatcgacgggaaggtttggcacctcgat 2527 Query: 481 gtcggctct 489 ||||||||| Sbjct: 2528 gtcggctct 2536
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 628 bits (317), Expect = e-177 Identities = 445/489 (91%), Gaps = 2/489 (0%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 137213 gtgaagatgcggactacccgcacccggacagaaagaccctatgaagctttactgttccct 137154 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 | ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 137153 gagattggctttgggcccttcctgcgcagcttaggtggaaggcgaagaaggtccccttcc 137094 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 | |||||||||||||| |||||||||| | ||||| |||||||| ||| | Sbjct: 137093 gggggggctcgagccatcagtgaaataccactctaggagagccaaaattctaactttgcg 137034 Query: 181 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 240 ||| | | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137033 tca--ctcacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 136976 Query: 241 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 300 ||| ||||||||||||| ||||||||| ||| |||| |||||| || | | || ||| Sbjct: 136975 taaagggtaacggaggcgcgcaaaggttcccttgggctggacggaaatcagccttcaagt 136916 Query: 301 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 360 |||||||| |||||||||| ||||||||||| |||||||||||||| ||||||||||||| Sbjct: 136915 gcaaaggcggaagggagctcgactgcaagacccacccgtcgagcagggacgaaagtcggc 136856 Query: 361 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136855 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 136796 Query: 421 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 480 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 136795 gggataacaggctgatcttccccaagagttcacatcgacgggaaggtttggcacctcgat 136736 Query: 481 gtcggctct 489 ||||||||| Sbjct: 136735 gtcggctct 136727 Score = 628 bits (317), Expect = e-177 Identities = 445/489 (91%), Gaps = 2/489 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 84664 gtgaagatgcggactacccgcacccggacagaaagaccctatgaagctttactgttccct 84723 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 | ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 84724 gagattggctttgggcccttcctgcgcagcttaggtggaaggcgaagaaggtccccttcc 84783 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 | |||||||||||||| |||||||||| | ||||| |||||||| ||| | Sbjct: 84784 gggggggctcgagccatcagtgaaataccactctaggagagccaaaattctaactttgcg 84843 Query: 181 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 240 ||| | | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84844 tca--ctcacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 84901 Query: 241 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 300 ||| ||||||||||||| ||||||||| ||| |||| |||||| || | | || ||| Sbjct: 84902 taaagggtaacggaggcgcgcaaaggttcccttgggctggacggaaatcagccttcaagt 84961 Query: 301 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 360 |||||||| |||||||||| ||||||||||| |||||||||||||| ||||||||||||| Sbjct: 84962 gcaaaggcggaagggagctcgactgcaagacccacccgtcgagcagggacgaaagtcggc 85021 Query: 361 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85022 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 85081 Query: 421 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 480 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 85082 gggataacaggctgatcttccccaagagttcacatcgacgggaaggtttggcacctcgat 85141 Query: 481 gtcggctct 489 ||||||||| Sbjct: 85142 gtcggctct 85150
>dbj|AK105825.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-E01, full insert sequence Length = 1345 Score = 618 bits (312), Expect = e-174 Identities = 326/333 (97%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 994 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 1053 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1054 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 1113 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1114 gggggggcccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 1173 Query: 181 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1174 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 1233 Query: 241 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1234 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 1293 Query: 301 gcaaaggcagaagggagcttgactgcaagactc 333 ||||||||||||||||||||||||||||||||| Sbjct: 1294 gcaaaggcagaagggagcttgactgcaagactc 1326
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 613 bits (309), Expect = e-172 Identities = 444/490 (90%), Gaps = 1/490 (0%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| Sbjct: 126396 gtgaagatgcggactacccgcacctggacagaaagaccctatgaagcttcactgttccct 126337 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 | |||||||||||||| ||||||||||||||||||| |||||||||||||||| |||| Sbjct: 126336 gagattggctttgggctcctcctgcgcagcttaggtgggaggcgaagaaggcccctttcc 126277 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 |||||||||||||| |||||||||| || | ||| | ||||||||| || | Sbjct: 126276 gggggggttcgagccatcagtgaaataccactctagaggggctagaattctaaccctgcg 126217 Query: 181 tca-gacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 ||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 126216 tcaagactgacgggccaagggacagtttcaggtagacagtttctatggggcgtaggcctc 126157 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 |||||||||||||||||||||||||||||||||| || |||||| || | | ||| Sbjct: 126156 ccaaaaggtaacggaggcgtgcaaaggtttcctcaagctggacggaaatcagcttttgag 126097 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||||| Sbjct: 126096 tgcaaaggcagaagggagcttgactgcaagacccaccagtcgagcagggacgaaagtcgg 126037 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 126036 ccttagtgatccgacggtgccaagtggaagggccgtcgctcaacggataaaagttactct 125977 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 125976 agggataacaggctgatcttccccaagagtccacattgacgggaaggtttggcacctcga 125917 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 125916 tgtcggctct 125907 Score = 613 bits (309), Expect = e-172 Identities = 444/490 (90%), Gaps = 1/490 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| Sbjct: 97051 gtgaagatgcggactacccgcacctggacagaaagaccctatgaagcttcactgttccct 97110 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 | |||||||||||||| ||||||||||||||||||| |||||||||||||||| |||| Sbjct: 97111 gagattggctttgggctcctcctgcgcagcttaggtgggaggcgaagaaggcccctttcc 97170 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 |||||||||||||| |||||||||| || | ||| | ||||||||| || | Sbjct: 97171 gggggggttcgagccatcagtgaaataccactctagaggggctagaattctaaccctgcg 97230 Query: 181 tca-gacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 ||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 97231 tcaagactgacgggccaagggacagtttcaggtagacagtttctatggggcgtaggcctc 97290 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 |||||||||||||||||||||||||||||||||| || |||||| || | | ||| Sbjct: 97291 ccaaaaggtaacggaggcgtgcaaaggtttcctcaagctggacggaaatcagcttttgag 97350 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 |||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||||| Sbjct: 97351 tgcaaaggcagaagggagcttgactgcaagacccaccagtcgagcagggacgaaagtcgg 97410 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 97411 ccttagtgatccgacggtgccaagtggaagggccgtcgctcaacggataaaagttactct 97470 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 97471 agggataacaggctgatcttccccaagagtccacattgacgggaaggtttggcacctcga 97530 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 97531 tgtcggctct 97540
>emb|AJ864703.1| Fragaria vesca partial chloroplast 23S rRNA gene Length = 500 Score = 611 bits (308), Expect = e-172 Identities = 348/360 (96%), Gaps = 1/360 (0%) Strand = Plus / Minus Query: 131 gagccatcagtgagataccactctggaagagctcggattctaaccttgtgtcag-acccg 189 ||||||||||||||||||||||||||||||||| | |||||||||||||||||| ||| Sbjct: 419 gagccatcagtgagataccactctggaagagctagaattctaaccttgtgtcaggaccta 360 Query: 190 cgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggta 249 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 359 cgggccaagggacattctcaggtagacagtttctatggggcgtaggcctcccaaaaggta 300 Query: 250 acggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaaggca 309 |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 299 acggaggcgtgcaaaggtttcctcgggccagacggagattggccctcgagtgcaaaggca 240 Query: 310 gaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgat 369 |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct: 239 gaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcggccttagtgat 180 Query: 370 ccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactctagggataaca 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 179 ccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactctagggataaca 120 Query: 430 ggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgatgtcggctct 489 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 119 ggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcgatgtcggctct 60
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 603 bits (304), Expect = e-169 Identities = 449/493 (91%), Gaps = 5/493 (1%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 4511 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgtttcct 4452 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttc- 119 ||||||| ||||||| |||| |||||| |||||||| ||||| ||||| ||||| Sbjct: 4451 gggattgagtttgggcttttcttgcgcacgttaggtggggggcgagaaaggctccctttg 4392 Query: 120 cnnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgt 179 | || |||||||||||||||||||||||| |||| || | | |||||||||| Sbjct: 4391 cgggggggccagagccatcagtgagataccactctagaagtgccagaactctaaccttgc 4332 Query: 180 gtcagacccg-cgggccaagggacagtctcaggtagacagtttctatggggcgtaggcct 238 |||||| || ||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 4331 gtcagaacctacgggccaagggacagtctcaggtagacagtttctatggggcgtaggc-t 4273 Query: 239 cccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagac-ggacattggtcctcg 297 |||||||||||||||||||||||||||||||||||||||| || || | | |||||||| Sbjct: 4272 cccaaaaggtaacggaggcgtgcaaaggtttcctcgggccgtactggccgtcggtcctcg 4213 Query: 298 agtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtc 357 |||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 4212 agtgtaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtc 4153 Query: 358 ggccttagtga-tccgacggtgccgagtggaagggccgtcgctcaacggataaaagttac 416 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4152 ggccttagtgaatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttac 4093 Query: 417 tctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacct 476 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 4092 tctagggataacaggctgatcttccccaagagttcacatcgacgggaaggtttggcacct 4033 Query: 477 cgatgtcggctct 489 ||||||||||||| Sbjct: 4032 cgatgtcggctct 4020
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 591 bits (298), Expect = e-166 Identities = 441/489 (90%), Gaps = 4/489 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2057 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 2116 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 ||||||||||| ||| ||| ||||||||||||||||||||| ||||||| ||| ||| Sbjct: 2117 gggattggcttcgggttcttcttgcgcagcttaggtggaaggcaaagaaggtccc--tcc 2174 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 | ||||| ||||||| ||||||||||||||||||| | |||||||||| | | Sbjct: 2175 cggggggctagagccgtcagtgaaataccactctggaagagctagaattctaacctcgcg 2234 Query: 181 tcagacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcc 240 ||| | || |||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2235 tcattcacg--ggccaaggaacagtctcaggtagacagtttctatggggcgtaggcctcc 2292 Query: 241 caaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagt 300 |||||||||||||||| | |||||||||||||| || ||||| || | | |||||| Sbjct: 2293 caaaaggtaacggaggtgcgcaaaggtttcctcaggttggacgggaatcagccttcgagt 2352 Query: 301 gcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggc 360 ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 2353 gcaaaggcagaagggagcttgactgcaagacatacccgtcgagcagggacgaaagtcggc 2412 Query: 361 cttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactcta 420 ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 2413 cttagtgatccgacggtaccaagtggaagggccgtcgctcaacggataaaagttactcta 2472 Query: 421 gggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgat 480 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 2473 gggataacaggctgatcttccccaagagttcacatcgacgggaaggtttggcacctcgat 2532 Query: 481 gtcggctct 489 ||||||||| Sbjct: 2533 gtcggctct 2541
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 579 bits (292), Expect = e-162 Identities = 301/304 (99%) Strand = Plus / Minus Query: 186 cccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaa 245 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 474825 cccgtgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaa 474766 Query: 246 ggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaa 305 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 474765 ggtaacggaggcgtgcaaaggtttcctcgggccagacgggcattggtcctcgagtgcaaa 474706 Query: 306 ggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggccttag 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 474705 ggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggccttag 474646 Query: 366 tgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactctagggat 425 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 474645 tgatccgacggtgccgagtggaagggccgtcgctcaacggatcaaagttactctagggat 474586 Query: 426 aacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgatgtcgg 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 474585 aacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgatgtcgg 474526 Query: 486 ctct 489 |||| Sbjct: 474525 ctct 474522 Score = 85.7 bits (43), Expect = 1e-13 Identities = 85/99 (85%) Strand = Plus / Plus Query: 338 gtcgagcagagacgaaagtcggccttagtgatccgacggtgccgagtggaagggccgtcg 397 ||||| |||||||||||||||||| |||||||||| || ||| |||||||||| ||| Sbjct: 403248 gtcgaacagagacgaaagtcggccatagtgatccgggagtcccgtgtggaagggctctcg 403307 Query: 398 ctcaacggataaaagttactctagggataacaggctgat 436 |||||||||| |||| ||| | |||||||||||||||| Sbjct: 403308 ctcaacggatcaaaggtacgccggggataacaggctgat 403346 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Minus Query: 289 tggtcctcgagtgcaaaggcagaaggga 316 |||||||||||||||| ||||||||||| Sbjct: 147554 tggtcctcgagtgcaagggcagaaggga 147527
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 579 bits (292), Expect = e-162 Identities = 301/304 (99%) Strand = Plus / Plus Query: 186 cccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaa 245 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 469171 cccgtgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaa 469230 Query: 246 ggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaa 305 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 469231 ggtaacggaggcgtgcaaaggtttcctcgggccagacgggcattggtcctcgagtgcaaa 469290 Query: 306 ggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggccttag 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 469291 ggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggccttag 469350 Query: 366 tgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactctagggat 425 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 469351 tgatccgacggtgccgagtggaagggccgtcgctcaacggatcaaagttactctagggat 469410 Query: 426 aacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgatgtcgg 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 469411 aacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgatgtcgg 469470 Query: 486 ctct 489 |||| Sbjct: 469471 ctct 469474 Score = 85.7 bits (43), Expect = 1e-13 Identities = 85/99 (85%) Strand = Plus / Minus Query: 338 gtcgagcagagacgaaagtcggccttagtgatccgacggtgccgagtggaagggccgtcg 397 ||||| |||||||||||||||||| |||||||||| || ||| |||||||||| ||| Sbjct: 281171 gtcgaacagagacgaaagtcggccatagtgatccgggagtcccgtgtggaagggctctcg 281112 Query: 398 ctcaacggataaaagttactctagggataacaggctgat 436 |||||||||| |||| ||| | |||||||||||||||| Sbjct: 281111 ctcaacggatcaaaggtacgccggggataacaggctgat 281073 Score = 85.7 bits (43), Expect = 1e-13 Identities = 85/99 (85%) Strand = Plus / Minus Query: 338 gtcgagcagagacgaaagtcggccttagtgatccgacggtgccgagtggaagggccgtcg 397 ||||| |||||||||||||||||| |||||||||| || ||| |||||||||| ||| Sbjct: 152479 gtcgaacagagacgaaagtcggccatagtgatccgggagtcccgtgtggaagggctctcg 152420 Query: 398 ctcaacggataaaagttactctagggataacaggctgat 436 |||||||||| |||| ||| | |||||||||||||||| Sbjct: 152419 ctcaacggatcaaaggtacgccggggataacaggctgat 152381 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Minus Query: 289 tggtcctcgagtgcaaaggcagaaggga 316 |||||||||||||||| ||||||||||| Sbjct: 488542 tggtcctcgagtgcaagggcagaaggga 488515
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 579 bits (292), Expect = e-162 Identities = 301/304 (99%) Strand = Plus / Minus Query: 186 cccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaa 245 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184343 cccgtgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaa 184284 Query: 246 ggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaa 305 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 184283 ggtaacggaggcgtgcaaaggtttcctcgggccagacgggcattggtcctcgagtgcaaa 184224 Query: 306 ggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggccttag 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184223 ggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggccttag 184164 Query: 366 tgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactctagggat 425 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 184163 tgatccgacggtgccgagtggaagggccgtcgctcaacggatcaaagttactctagggat 184104 Query: 426 aacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgatgtcgg 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184103 aacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgatgtcgg 184044 Query: 486 ctct 489 |||| Sbjct: 184043 ctct 184040 Score = 85.7 bits (43), Expect = 1e-13 Identities = 85/99 (85%) Strand = Plus / Plus Query: 338 gtcgagcagagacgaaagtcggccttagtgatccgacggtgccgagtggaagggccgtcg 397 ||||| |||||||||||||||||| |||||||||| || ||| |||||||||| ||| Sbjct: 295887 gtcgaacagagacgaaagtcggccatagtgatccgggagtcccgtgtggaagggctctcg 295946 Query: 398 ctcaacggataaaagttactctagggataacaggctgat 436 |||||||||| |||| ||| | |||||||||||||||| Sbjct: 295947 ctcaacggatcaaaggtacgccggggataacaggctgat 295985 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Minus Query: 289 tggtcctcgagtgcaaaggcagaaggga 316 |||||||||||||||| ||||||||||| Sbjct: 502198 tggtcctcgagtgcaagggcagaaggga 502171
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 579 bits (292), Expect = e-162 Identities = 301/304 (99%) Strand = Plus / Minus Query: 186 cccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaa 245 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 500848 cccgtgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaa 500789 Query: 246 ggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaa 305 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 500788 ggtaacggaggcgtgcaaaggtttcctcgggccagacgggcattggtcctcgagtgcaaa 500729 Query: 306 ggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggccttag 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 500728 ggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggccttag 500669 Query: 366 tgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactctagggat 425 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 500668 tgatccgacggtgccgagtggaagggccgtcgctcaacggatcaaagttactctagggat 500609 Query: 426 aacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgatgtcgg 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 500608 aacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgatgtcgg 500549 Query: 486 ctct 489 |||| Sbjct: 500548 ctct 500545 Score = 85.7 bits (43), Expect = 1e-13 Identities = 85/99 (85%) Strand = Plus / Plus Query: 338 gtcgagcagagacgaaagtcggccttagtgatccgacggtgccgagtggaagggccgtcg 397 ||||| |||||||||||||||||| |||||||||| || ||| |||||||||| ||| Sbjct: 268722 gtcgaacagagacgaaagtcggccatagtgatccgggagtcccgtgtggaagggctctcg 268781 Query: 398 ctcaacggataaaagttactctagggataacaggctgat 436 |||||||||| |||| ||| | |||||||||||||||| Sbjct: 268782 ctcaacggatcaaaggtacgccggggataacaggctgat 268820 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Minus Query: 289 tggtcctcgagtgcaaaggcagaaggga 316 |||||||||||||||| ||||||||||| Sbjct: 156328 tggtcctcgagtgcaagggcagaaggga 156301
>gb|M36716.1|MZEMTCPAA Maize mitochondrion with chloroplast insert containing rRNAs Length = 1986 Score = 577 bits (291), Expect = e-161 Identities = 298/299 (99%), Gaps = 1/299 (0%) Strand = Plus / Plus Query: 192 ggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaac 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 402 ggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaac 461 Query: 252 ggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaaggcaga 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 462 ggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaaggcaga 521 Query: 312 a-gggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatc 370 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 522 aagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatc 581 Query: 371 cgacggtgccgagtggaagggccgtcgctcaacggataaaagttactctagggataacag 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 582 cgacggtgccgagtggaagggccgtcgctcaacggataaaagttactctagggataacag 641 Query: 431 gctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgatgtcggctct 489 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 642 gctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgatgtcggctct 700
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 567 bits (286), Expect = e-158 Identities = 341/358 (95%), Gaps = 1/358 (0%) Strand = Plus / Minus Query: 128 cccgagccatcagtgagataccactctggaagagctcggattctaaccttgtgtcag-ac 186 |||||||||||||||||||||||||||||||||||| | |||||||||||||||||| || Sbjct: 50522 cccgagccatcagtgagataccactctggaagagctagaattctaaccttgtgtcaggac 50463 Query: 187 ccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaag 246 | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50462 ctacgggccgcgggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaag 50403 Query: 247 gtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaag 306 |||||||||||||||||||||||||||||||| | |||| ||||| |||||||||||||| Sbjct: 50402 gtaacggaggcgtgcaaaggtttcctcgggccgggcggagattggccctcgagtgcaaag 50343 Query: 307 gcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggccttagt 366 ||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 50342 gcataagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcggccttagt 50283 Query: 367 gatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactctagggata 426 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50282 gatccgacggtaccgagtggaagggccgtcgctcaacggataaaagttactctagggata 50223 Query: 427 acaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgatgtcg 484 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 50222 acaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcgatgtcg 50165 Score = 567 bits (286), Expect = e-158 Identities = 341/358 (95%), Gaps = 1/358 (0%) Strand = Plus / Plus Query: 128 cccgagccatcagtgagataccactctggaagagctcggattctaaccttgtgtcag-ac 186 |||||||||||||||||||||||||||||||||||| | |||||||||||||||||| || Sbjct: 39306 cccgagccatcagtgagataccactctggaagagctagaattctaaccttgtgtcaggac 39365 Query: 187 ccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaag 246 | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 39366 ctacgggccgcgggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaag 39425 Query: 247 gtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaag 306 |||||||||||||||||||||||||||||||| | |||| ||||| |||||||||||||| Sbjct: 39426 gtaacggaggcgtgcaaaggtttcctcgggccgggcggagattggccctcgagtgcaaag 39485 Query: 307 gcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggccttagt 366 ||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 39486 gcataagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcggccttagt 39545 Query: 367 gatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactctagggata 426 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 39546 gatccgacggtaccgagtggaagggccgtcgctcaacggataaaagttactctagggata 39605 Query: 427 acaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgatgtcg 484 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 39606 acaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcgatgtcg 39663 Score = 198 bits (100), Expect = 1e-47 Identities = 109/112 (97%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50640 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 50581 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggc 112 ||||||| ||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 50580 gggattgagtttgggcttttcctgcgcagcttaggtggaaggcgaagaaggc 50529 Score = 198 bits (100), Expect = 1e-47 Identities = 109/112 (97%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 39188 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 39247 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggc 112 ||||||| ||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 39248 gggattgagtttgggcttttcctgcgcagcttaggtggaaggcgaagaaggc 39299
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 567 bits (286), Expect = e-158 Identities = 341/358 (95%), Gaps = 1/358 (0%) Strand = Plus / Plus Query: 128 cccgagccatcagtgagataccactctggaagagctcggattctaaccttgtgtcag-ac 186 |||||||||||||||||||||||||||||||||||| | |||||||||||||||||| || Sbjct: 6234 cccgagccatcagtgagataccactctggaagagctagaattctaaccttgtgtcaggac 6293 Query: 187 ccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaag 246 | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6294 ctacgggccgcgggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaag 6353 Query: 247 gtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaag 306 |||||||||||||||||||||||||||||||| | |||| ||||| |||||||||||||| Sbjct: 6354 gtaacggaggcgtgcaaaggtttcctcgggccgggcggagattggccctcgagtgcaaag 6413 Query: 307 gcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggccttagt 366 ||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 6414 gcataagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcggccttagt 6473 Query: 367 gatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactctagggata 426 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6474 gatccgacggtaccgagtggaagggccgtcgctcaacggataaaagttactctagggata 6533 Query: 427 acaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgatgtcg 484 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 6534 acaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcgatgtcg 6591 Score = 198 bits (100), Expect = 1e-47 Identities = 109/112 (97%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6116 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 6175 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggc 112 ||||||| ||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 6176 gggattgagtttgggcttttcctgcgcagcttaggtggaaggcgaagaaggc 6227
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 565 bits (285), Expect = e-158 Identities = 438/490 (89%), Gaps = 1/490 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| Sbjct: 145962 gtgaagatgcggactacccgcacctggacagaaagaccctatgaagcttcactgttccct 146021 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 | |||||| || |||| ||| ||||||||||||||||||||| |||| ||| || |||| Sbjct: 146022 gcgattggattcgggctcttcttgcgcagcttaggtggaaggcaaagagggctcctttcc 146081 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 || |||||||||||||||||||||||| ||||| || | |||||||||||||| Sbjct: 146082 ggaggggcctgagccatcagtgagataccactctagaagaactagaattctaaccttgtg 146141 Query: 181 tca-gacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 ||| || ||| ||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 146142 tcaagaattacggaccaagagacagtcccaggtagacagtttctatggggcgtaggcctc 146201 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 ||||| |||||||||||| |||||||||||||| ||| |||||| || | | |||| Sbjct: 146202 ccaaagagtaacggaggcgcgcaaaggtttcctcaggctggacggaaatcagcctacgag 146261 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 ||||||||||||||||||||||||||| |||| ||| ||||||||| |||||||||||| Sbjct: 146262 tgcaaaggcagaagggagcttgactgcgagacctaccagtcgagcagggacgaaagtcgg 146321 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 146322 ccttagtgatccgacggttccaagtggaagggccgtcgctcaacggataaaagttactct 146381 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 146382 agggataacaggctgatcttccccaagagttcacatcgacgggaaggtttggcacctcga 146441 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 146442 tgtcggctct 146451 Score = 565 bits (285), Expect = e-158 Identities = 438/490 (89%), Gaps = 1/490 (0%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| Sbjct: 86889 gtgaagatgcggactacccgcacctggacagaaagaccctatgaagcttcactgttccct 86830 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 | |||||| || |||| ||| ||||||||||||||||||||| |||| ||| || |||| Sbjct: 86829 gcgattggattcgggctcttcttgcgcagcttaggtggaaggcaaagagggctcctttcc 86770 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 || |||||||||||||||||||||||| ||||| || | |||||||||||||| Sbjct: 86769 ggaggggcctgagccatcagtgagataccactctagaagaactagaattctaaccttgtg 86710 Query: 181 tca-gacccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctc 239 ||| || ||| ||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 86709 tcaagaattacggaccaagagacagtcccaggtagacagtttctatggggcgtaggcctc 86650 Query: 240 ccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgag 299 ||||| |||||||||||| |||||||||||||| ||| |||||| || | | |||| Sbjct: 86649 ccaaagagtaacggaggcgcgcaaaggtttcctcaggctggacggaaatcagcctacgag 86590 Query: 300 tgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcgg 359 ||||||||||||||||||||||||||| |||| ||| ||||||||| |||||||||||| Sbjct: 86589 tgcaaaggcagaagggagcttgactgcgagacctaccagtcgagcagggacgaaagtcgg 86530 Query: 360 ccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactct 419 |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 86529 ccttagtgatccgacggttccaagtggaagggccgtcgctcaacggataaaagttactct 86470 Query: 420 agggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 86469 agggataacaggctgatcttccccaagagttcacatcgacgggaaggtttggcacctcga 86410 Query: 480 tgtcggctct 489 |||||||||| Sbjct: 86409 tgtcggctct 86400
>emb|AJ001025.1|CLPACHLLN Picea abies chloroplast DNA for chlL, trnR, trnH, trnN, 23S rRNA, 4.5S rRNA and 5S rRNA genes Length = 4027 Score = 555 bits (280), Expect = e-155 Identities = 314/324 (96%), Gaps = 1/324 (0%) Strand = Plus / Plus Query: 167 attctaaccttgtgtcag-acccgcgggccaagggacagtctcaggtagacagtttctat 225 |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 3 attctaaccttgtgtcaggacctacgggccaagggacagtctcaggtagacagtttctat 62 Query: 226 ggggcgtaggcctcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacgga 285 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 63 ggggcgtaggcctcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccggacgga 122 Query: 286 cattggtcctcgagtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagca 345 || || ||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 123 aatcggccctcgagtgcaaaggcagaagggagcttgactgcaagacccacccgtcgagca 182 Query: 346 gagacgaaagtcggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacgg 405 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 183 gggacgaaagtcggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacgg 242 Query: 406 ataaaagttactctagggataacaggctgatcttccccaagagtccacatcgacgggaag 465 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 243 ataaaagttactctagggataacaggctgatcttccccaagagttcacatcgacgggaag 302 Query: 466 gtttggcacctcgatgtcggctct 489 |||||||||||||||||||||||| Sbjct: 303 gtttggcacctcgatgtcggctct 326
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 519 bits (262), Expect = e-144 Identities = 340/362 (93%), Gaps = 3/362 (0%) Strand = Plus / Plus Query: 129 ccgagccatcagtgagataccactctggaagagctcggattctaaccttgtgtcag-acc 187 ||||||||||||||||||||||||||||||||||| ||||||||||||||| || ||| Sbjct: 2172 ccgagccatcagtgagataccactctggaagagctataattctaaccttgtgttaggacc 2231 Query: 188 cgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaagg 247 ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 2232 aacgggcgc-gggacagtctcaggtagacagtttctatggggcgtaggc-tcccaaaagg 2289 Query: 248 taacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaagg 307 ||||||||||||||||||||||||||||||| | ||| ||||| ||||||||||||||| Sbjct: 2290 taacggaggcgtgcaaaggtttcctcgggccgggcggggattggccctcgagtgcaaagg 2349 Query: 308 cagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtg 367 ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 2350 cagaagggagcttgactgcaagactcacccgtcgagcagggacgaaactcggccttagtg 2409 Query: 368 atccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactctagggataa 427 |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2410 atccgacggtaccaagtggaagggccgtcgctcaacggataaaagttactctagggataa 2469 Query: 428 caggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgatgtcggct 487 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 2470 caggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcgatgtcggct 2529 Query: 488 ct 489 || Sbjct: 2530 ct 2531 Score = 161 bits (81), Expect = 3e-36 Identities = 107/113 (94%), Gaps = 2/113 (1%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactg-ttccc 59 ||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||| Sbjct: 2053 gtgaagatgcggactacctgcacctggacagaaagaccctacgaagctt-actggttccc 2111 Query: 60 tgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggc 112 ||||||||| ||||||||||||||| ||||||||||||||||||| ||||||| Sbjct: 2112 tgggattgggtttgggcctttcctgtgcagcttaggtggaaggcggagaaggc 2164
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 513 bits (259), Expect = e-142 Identities = 336/359 (93%), Gaps = 2/359 (0%) Strand = Plus / Plus Query: 132 agccatcagtgagataccactct-ggaagagctcggattctaaccttgtgtcagacccgc 190 ||||||| ||||| ||||||| | ||| ||||| | ||| |||||||||||||| | | Sbjct: 2188 agccatccgtgagttaccacttttggaggagctagaattttaaccttgtgtcaggactac 2247 Query: 191 gggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaa 250 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||| Sbjct: 2248 gggccaagggacattctcaggtagacagtttttatggggcgtaggcctcccaaaagttaa 2307 Query: 251 cggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaaggcag 310 ||||||||||||||| |||||||||||| |||||| ||||| |||||||||||||||||| Sbjct: 2308 cggaggcgtgcaaag-tttcctcgggccggacggagattggccctcgagtgcaaaggcag 2366 Query: 311 aagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatc 370 ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 2367 aagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcggccttagtgatc 2426 Query: 371 cgacggtgccgagtggaagggccgtcgctcaacggataaaagttactctagggataacag 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2427 cgacggtgccgagtggaagggccgtcgctcaacggataaaagttactctagggataacag 2486 Query: 431 gctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgatgtcggctct 489 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 2487 gctgatcttccccaagagctcacatcgacgggaaggtttggcacctcgatgtcggctct 2545 Score = 48.1 bits (24), Expect = 0.027 Identities = 36/40 (90%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccct 40 |||||||||||| ||||||||||| ||||||||||||| Sbjct: 2060 gtgaagatgcggggtacctgcacctttacagaaagaccct 2099
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 492 bits (248), Expect = e-136 Identities = 330/356 (92%), Gaps = 1/356 (0%) Strand = Plus / Minus Query: 135 catcagtgagataccactctggaagagctcggattctaaccttgtgtcagacccg-cggg 193 ||||||||| |||||||||| |||||||| | ||||||||||||||||| | |||| Sbjct: 114031 catcagtgaaataccactctagaagagctagaattctaaccttgtgtcaaaatttacggg 113972 Query: 194 ccaagggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacgg 253 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113971 ccaagggacattctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacgg 113912 Query: 254 aggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaag 313 ||| |||||||||||||||| ||| |||||| || | | ||||||||||||||||||| Sbjct: 113911 aggtgtgcaaaggtttcctcaggctggacggaaatcagccttcgagtgcaaaggcagaag 113852 Query: 314 ggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccga 373 |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| Sbjct: 113851 ggagcttgactgcaagacatacccgtcgagcagggacgaaagtcggccttagtgatccga 113792 Query: 374 cggtgccgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggct 433 |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113791 cggtaccaagtggaagggccgtcgctcaacggataaaagttactctagggataacaggct 113732 Query: 434 gatcttccccaagagtccacatcgacgggaaggtttggcacctcgatgtcggctct 489 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 113731 gatcttccccaagagttcacatcgacgggaaggtttggcacctcgatgtcggctct 113676 Score = 492 bits (248), Expect = e-136 Identities = 330/356 (92%), Gaps = 1/356 (0%) Strand = Plus / Plus Query: 135 catcagtgagataccactctggaagagctcggattctaaccttgtgtcagacccg-cggg 193 ||||||||| |||||||||| |||||||| | ||||||||||||||||| | |||| Sbjct: 88089 catcagtgaaataccactctagaagagctagaattctaaccttgtgtcaaaatttacggg 88148 Query: 194 ccaagggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacgg 253 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88149 ccaagggacattctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacgg 88208 Query: 254 aggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaag 313 ||| |||||||||||||||| ||| |||||| || | | ||||||||||||||||||| Sbjct: 88209 aggtgtgcaaaggtttcctcaggctggacggaaatcagccttcgagtgcaaaggcagaag 88268 Query: 314 ggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccga 373 |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| Sbjct: 88269 ggagcttgactgcaagacatacccgtcgagcagggacgaaagtcggccttagtgatccga 88328 Query: 374 cggtgccgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggct 433 |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88329 cggtaccaagtggaagggccgtcgctcaacggataaaagttactctagggataacaggct 88388 Query: 434 gatcttccccaagagtccacatcgacgggaaggtttggcacctcgatgtcggctct 489 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 88389 gatcttccccaagagttcacatcgacgggaaggtttggcacctcgatgtcggctct 88444 Score = 196 bits (99), Expect = 5e-47 Identities = 111/115 (96%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 114162 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 114103 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccc 115 ||||||||||||||| |||| ||||||||||||||||||||| ||||||||||| Sbjct: 114102 gggattggctttgggtttttcttgcgcagcttaggtggaaggcaaagaaggcccc 114048 Score = 196 bits (99), Expect = 5e-47 Identities = 111/115 (96%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87958 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 88017 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccc 115 ||||||||||||||| |||| ||||||||||||||||||||| ||||||||||| Sbjct: 88018 gggattggctttgggtttttcttgcgcagcttaggtggaaggcaaagaaggcccc 88072
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 468 bits (236), Expect = e-129 Identities = 330/360 (91%), Gaps = 1/360 (0%) Strand = Plus / Plus Query: 131 gagccatcagtgagataccactctggaagagctcggattctaaccttgtgtcag-acccg 189 ||||||||||||| |||||||||| |||||||| | |||||||||| |||||| | Sbjct: 2136 gagccatcagtgaaataccactctagaagagctagaattctaacctcgtgtcaatattta 2195 Query: 190 cgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggta 249 |||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 2196 cgggccgaggaacagtcccaggtagacagtttctatggggcgtaggcctcccaaaaggta 2255 Query: 250 acggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaaggca 309 ||||||| |||||||||||||||| ||| |||||| || | | ||||||||||||||| Sbjct: 2256 acggaggtgtgcaaaggtttcctcaggctggacggaaatcagccttcgagtgcaaaggca 2315 Query: 310 gaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgat 369 |||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||| Sbjct: 2316 gaagggagcttgactgcaagacatacctgtcgagcagggacgaaagtcggccttagtgat 2375 Query: 370 ccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactctagggataaca 429 |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2376 ccgacggtaccaagtggaagggccgtcgctcaacggataaaagttactctagggataaca 2435 Query: 430 ggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgatgtcggctct 489 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 2436 ggctgatcttccccaagagttcacatcgacgggaaggtttggcacctcgatgtcggctct 2495 Score = 161 bits (81), Expect = 3e-36 Identities = 102/109 (93%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2008 gtgaagatgcggactacccgcacctggacagaaagaccctatgaagctttactgttccct 2067 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaa 109 ||||||||||| ||| ||| ||||||||||||||||||||| ||||| Sbjct: 2068 gggattggcttcgggttcttcttgcgcagcttaggtggaaggcaaagaa 2116
>emb|AJ005357.1|ATA005357 Aesculus turbinata microsatellite DNA, locus AT3D6 Length = 744 Score = 464 bits (234), Expect = e-127 Identities = 293/314 (93%), Gaps = 2/314 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 49 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgttccct 108 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 109 gggattggctttgggcttttcctgcgcagcttaggtggaaggcgaagaaggcctccttcc 168 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 |||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 169 gggggggcccgagccatcagtgagataccactctggaagagctagaattctaaccttgtg 228 Query: 181 tcagaccc--gcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcct 238 |||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 229 tcaggacctaacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcct 288 Query: 239 cccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcga 298 |||||||||||||||||||||||||||||||| ||||||| |||||| ||||| |||||| Sbjct: 289 cccaaaaggtaacggaggcgtgcaaaggtttcttcgggccggacggagattggccctcga 348 Query: 299 gtgcaaaggcagaa 312 |||||||||||||| Sbjct: 349 gtgcaaaggcagaa 362
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 460 bits (232), Expect = e-126 Identities = 277/292 (94%) Strand = Plus / Plus Query: 198 gggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggc 257 |||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 2561 gggacattcccaggtagacagtttctatggggcgtaggcctcctaaaaggtaacggaggc 2620 Query: 258 gtgcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaagggag 317 |||||||||||||||| ||| |||||| || | |||||||||||||||||||||| || Sbjct: 2621 gtgcaaaggtttcctcaggctggacggaaatcagccctcgagtgcaaaggcagaaggaag 2680 Query: 318 cttgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacggt 377 ||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||| Sbjct: 2681 cttgactgcaagacttacacgtcgagcagggacgaaagtcggccttagtgatccgacggt 2740 Query: 378 gccgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2741 gccgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatc 2800 Query: 438 ttccccaagagtccacatcgacgggaaggtttggcacctcgatgtcggctct 489 |||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 2801 ttccccaagagttcacatcgacgggaaggtttggcacctcgatgtcggctct 2852 Score = 186 bits (94), Expect = 5e-44 Identities = 106/110 (96%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2365 gtgaagatgcggactacctacacctggacagaaagaccctatgaagctttactgttccct 2424 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaag 110 |||||||| |||||||||||| |||||||||||||||| ||||||||||| Sbjct: 2425 gggattgggtttgggcctttcttgcgcagcttaggtgggaggcgaagaag 2474
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 460 bits (232), Expect = e-126 Identities = 277/292 (94%) Strand = Plus / Plus Query: 198 gggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggc 257 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 2397 gggacagtcccaggtagacagtttctatggggcgtaggcctcccaaagggtaacggaggc 2456 Query: 258 gtgcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaagggag 317 |||||||||||||||| ||| |||||| || | | ||||||||||||||||||||||| Sbjct: 2457 gtgcaaaggtttcctcaggctggacggaaatcagccttcgagtgcaaaggcagaagggag 2516 Query: 318 cttgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacggt 377 |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 2517 cttgactgcaagacctacccgtcgagcagggacgaaagtcggccttagtgatccgacggt 2576 Query: 378 gccgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatc 437 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2577 tccgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatc 2636 Query: 438 ttccccaagagtccacatcgacgggaaggtttggcacctcgatgtcggctct 489 |||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 2637 ttccccaagagttcacatcgacgggaaggtttggcacctcgatgtcggctct 2688 Score = 159 bits (80), Expect = 1e-35 Identities = 101/108 (93%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2201 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 2260 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 108 ||||| || |||||||| ||| ||||||| ||||||| ||||||||| Sbjct: 2261 gggatggggtttgggcccttcttgcgcagtctaggtgggaggcgaaga 2308
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 452 bits (228), Expect = e-124 Identities = 276/292 (94%) Strand = Plus / Plus Query: 198 gggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggc 257 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 2270 gggacagtcccaggtagacagtttctatggggcgtaggcctcccaaagggtaacggaggc 2329 Query: 258 gtgcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaagggag 317 |||||||||||||||| ||| |||||| || | | ||||||||||||||||||||||| Sbjct: 2330 gtgcaaaggtttcctcaggctggacggaaatcagccttcgagtgcaaaggcagaagggag 2389 Query: 318 cttgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacggt 377 |||||||||||||| || |||||||||| |||||||||||||||||||||||||||||| Sbjct: 2390 cttgactgcaagacctacacgtcgagcagggacgaaagtcggccttagtgatccgacggt 2449 Query: 378 gccgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatc 437 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2450 tccgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatc 2509 Query: 438 ttccccaagagtccacatcgacgggaaggtttggcacctcgatgtcggctct 489 |||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 2510 ttccccaagagttcacatcgacgggaaggtttggcacctcgatgtcggctct 2561 Score = 167 bits (84), Expect = 4e-38 Identities = 102/108 (94%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2074 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 2133 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 108 ||||| ||||||||||| ||| ||||||| ||||||| ||||||||| Sbjct: 2134 gggatgggctttgggcccttcttgcgcagtctaggtgggaggcgaaga 2181
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 452 bits (228), Expect = e-124 Identities = 276/292 (94%) Strand = Plus / Plus Query: 198 gggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggc 257 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 2283 gggacagtcccaggtagacagtttctatggggcgtaggcctcccaaagggtaacggaggc 2342 Query: 258 gtgcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaagggag 317 |||||||||||||||| ||| |||||| || | | ||||||||||||||||||||||| Sbjct: 2343 gtgcaaaggtttcctcaggctggacggaaatcagccttcgagtgcaaaggcagaagggag 2402 Query: 318 cttgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacggt 377 |||||||||||||| || |||||||||| |||||||||||||||||||||||||||||| Sbjct: 2403 cttgactgcaagacctacacgtcgagcagggacgaaagtcggccttagtgatccgacggt 2462 Query: 378 gccgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatc 437 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2463 tccgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatc 2522 Query: 438 ttccccaagagtccacatcgacgggaaggtttggcacctcgatgtcggctct 489 |||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 2523 ttccccaagagttcacatcgacgggaaggtttggcacctcgatgtcggctct 2574 Score = 167 bits (84), Expect = 4e-38 Identities = 102/108 (94%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2087 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 2146 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 108 ||||| ||||||||||| ||| ||||||| ||||||| ||||||||| Sbjct: 2147 gggatgggctttgggcccttcttgcgcagtctaggtgggaggcgaaga 2194
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 446 bits (225), Expect = e-122 Identities = 270/285 (94%) Strand = Plus / Plus Query: 205 tctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcgtgcaaa 264 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 2156 tctcaggtagacagtttctatggggcgtaggcctcctaaagagtaacggaggcgtgcaaa 2215 Query: 265 ggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaagggagcttgact 324 |||| |||||||| |||||| || ||| |||||||||||||||||||||||||||||| Sbjct: 2216 ggttccctcgggctggacggaaatcagtcttcgagtgcaaaggcagaagggagcttgact 2275 Query: 325 gcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacggtgccgagt 384 |||||||| || |||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 2276 gcaagacttacacgtcgagcagggacgaaagtcggccttagtgatccgacggtaccgagt 2335 Query: 385 ggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatcttcccca 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2336 ggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatcttcccca 2395 Query: 445 agagtccacatcgacgggaaggtttggcacctcgatgtcggctct 489 ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 2396 agagttcacatcgacgggaaggtttggcacctcgatgtcggctct 2440 Score = 155 bits (78), Expect = 2e-34 Identities = 93/98 (94%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1952 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 2011 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtgg 98 |||||||| ||||||||| | ||||||| |||||||| Sbjct: 2012 gggattgggtttgggcctcttttgcgcagtttaggtgg 2049
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 444 bits (224), Expect = e-121 Identities = 275/292 (94%) Strand = Plus / Plus Query: 198 gggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggc 257 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 2208 gggacagtctcaggtagacagtttctatggggcgtaggcctcccaaagggtaacggaggc 2267 Query: 258 gtgcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaagggag 317 ||||||||||| |||| || |||||| || | ||||||||||||||||||||||| Sbjct: 2268 gtgcaaaggttccctcaggttggacggaaatcaaccttcgagtgcaaaggcagaagggag 2327 Query: 318 cttgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacggt 377 |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 2328 cttgactgcaagactcacacgtcgagcagggacgaaagtcggccttagtgatccgacggt 2387 Query: 378 gccgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatc 437 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2388 tccgtgtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatc 2447 Query: 438 ttccccaagagtccacatcgacgggaaggtttggcacctcgatgtcggctct 489 |||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 2448 ttccccaagagttcacatcgacgggaaggtttggcacctcgatgtcggctct 2499 Score = 180 bits (91), Expect = 3e-42 Identities = 106/111 (95%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2014 gtgaagatgcggactagctgcacctggacagaaagaccctatgaagctttactgttccct 2073 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaagg 111 |||||||||||||||| | || |||||||||||||||| |||||||||||| Sbjct: 2074 gggattggctttgggcttctcttgcgcagcttaggtgggaggcgaagaagg 2124
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 444 bits (224), Expect = e-121 Identities = 275/292 (94%) Strand = Plus / Minus Query: 198 gggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggc 257 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 123057 gggacagtctcaggtagacagtttctatggggcgtaggcctcccaaagggtaacggaggc 122998 Query: 258 gtgcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaagggag 317 ||||||||||| |||| || |||||| || | ||||||||||||||||||||||| Sbjct: 122997 gtgcaaaggttccctcaggttggacggaaatcaaccttcgagtgcaaaggcagaagggag 122938 Query: 318 cttgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacggt 377 |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 122937 cttgactgcaagactcacacgtcgagcagggacgaaagtcggccttagtgatccgacggt 122878 Query: 378 gccgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatc 437 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122877 tccgtgtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatc 122818 Query: 438 ttccccaagagtccacatcgacgggaaggtttggcacctcgatgtcggctct 489 |||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 122817 ttccccaagagttcacatcgacgggaaggtttggcacctcgatgtcggctct 122766 Score = 444 bits (224), Expect = e-121 Identities = 275/292 (94%) Strand = Plus / Plus Query: 198 gggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggc 257 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 96809 gggacagtctcaggtagacagtttctatggggcgtaggcctcccaaagggtaacggaggc 96868 Query: 258 gtgcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaagggag 317 ||||||||||| |||| || |||||| || | ||||||||||||||||||||||| Sbjct: 96869 gtgcaaaggttccctcaggttggacggaaatcaaccttcgagtgcaaaggcagaagggag 96928 Query: 318 cttgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacggt 377 |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 96929 cttgactgcaagactcacacgtcgagcagggacgaaagtcggccttagtgatccgacggt 96988 Query: 378 gccgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatc 437 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96989 tccgtgtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatc 97048 Query: 438 ttccccaagagtccacatcgacgggaaggtttggcacctcgatgtcggctct 489 |||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 97049 ttccccaagagttcacatcgacgggaaggtttggcacctcgatgtcggctct 97100 Score = 180 bits (91), Expect = 3e-42 Identities = 106/111 (95%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123251 gtgaagatgcggactagctgcacctggacagaaagaccctatgaagctttactgttccct 123192 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaagg 111 |||||||||||||||| | || |||||||||||||||| |||||||||||| Sbjct: 123191 gggattggctttgggcttctcttgcgcagcttaggtgggaggcgaagaagg 123141 Score = 180 bits (91), Expect = 3e-42 Identities = 106/111 (95%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96615 gtgaagatgcggactagctgcacctggacagaaagaccctatgaagctttactgttccct 96674 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaagg 111 |||||||||||||||| | || |||||||||||||||| |||||||||||| Sbjct: 96675 gggattggctttgggcttctcttgcgcagcttaggtgggaggcgaagaagg 96725
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 442 bits (223), Expect = e-121 Identities = 330/363 (90%), Gaps = 17/363 (4%) Strand = Plus / Plus Query: 128 cccgagccatcagtgagataccactctggaagagctcggattctaaccttgtgtcag-ac 186 ||||||||||||||||||||||||||| |||||| | |||||||||||||||||| || Sbjct: 2215 cccgagccatcagtgagataccactcttccagagctagaattctaaccttgtgtcaggac 2274 Query: 187 ccgcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaag 246 | |||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||| Sbjct: 2275 ctacgggccaagggacagtctcaggtaaacagtttct--ggggcgtag-cctcccaaaag 2331 Query: 247 gtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaag 306 ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 2332 gtaacggaggcgtgcaaaggtttcctcgggccagacggagattggccctcgagtgcaaag 2391 Query: 307 gcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggccttagt 366 ||||||||||||||||||||||||| ||||| ||||||||||||||||||| Sbjct: 2392 gcagaagggagcttgactgcaagaccgacccg---------gacgaaagtcggccttagt 2442 Query: 367 gatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactctagggata 426 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 2443 gatccgacggtgccgagtggaagggccgtcgctcaacggataaaagtgactctagggata 2502 Query: 427 acaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgatgtcggc 486 | |||||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 2503 agaggctgatcttccccaagagctcacat----gggaaggtttggcacctcgatgtcggc 2558 Query: 487 tct 489 ||| Sbjct: 2559 tct 2561 Score = 180 bits (91), Expect = 3e-42 Identities = 109/115 (94%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||| |||||||||||||||||||||||||||||||| ||||| ||| |||||| Sbjct: 2087 gtgaagatggggactacctgcacctggacagaaagaccctattcagcttcactcttccct 2146 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccc 115 |||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 2147 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaagccccc 2201 Score = 63.9 bits (32), Expect = 5e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacaga 32 |||||||||||||||||||||||||||||||| Sbjct: 1500 gtgaagatgcggactacctgcacctggacaga 1531
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 428 bits (216), Expect = e-117 Identities = 273/292 (93%) Strand = Plus / Plus Query: 198 gggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggc 257 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2132 gggacagtcccaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggc 2191 Query: 258 gtgcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaagggag 317 ||||||||||| |||| ||| |||||| || | | |||||| ||||||||||||||| Sbjct: 2192 gtgcaaaggttccctcaggctggacggaaatcagccatcgagtataaaggcagaagggag 2251 Query: 318 cttgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacggt 377 |||||||||||||| || ||||||||| |||||||||||||||||||||||||||||| Sbjct: 2252 cttgactgcaagacggacatgtcgagcagggacgaaagtcggccttagtgatccgacggt 2311 Query: 378 gccgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatc 437 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2312 tccgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatc 2371 Query: 438 ttccccaagagtccacatcgacgggaaggtttggcacctcgatgtcggctct 489 |||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 2372 ttccccaagagttcacatcgacgggaaggtttggcacctcgatgtcggctct 2423 Score = 167 bits (84), Expect = 4e-38 Identities = 102/108 (94%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1936 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttcctt 1995 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 108 ||||| |||||||||| | || ||||||||||||||||||||| |||| Sbjct: 1996 gggatgggctttgggcttctcttgcgcagcttaggtggaaggcaaaga 2043
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 422 bits (213), Expect = e-115 Identities = 314/347 (90%), Gaps = 3/347 (0%) Strand = Plus / Plus Query: 131 gagccatcagtgagataccactctggaagagctcggattctaaccttgtgtcagacccgc 190 |||||||||||||||||||||||| || |||| | ||||||||||| |||| ||| Sbjct: 6190 gagccatcagtgagataccactcttgagaagctagaattctaaccttatgtcgtttccg- 6248 Query: 191 gggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaa 250 || |||||| |||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 6249 --gctaagggaaagtctcaggtagacagtttctatggggcgtaggcctcccaaagggtaa 6306 Query: 251 cggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaaggcag 310 |||||||||||||||||| |||| ||| |||||| || | | | ||||| ||||||| Sbjct: 6307 cggaggcgtgcaaaggttccctcaggctggacggaaatcagccattgagtgtaaaggcaa 6366 Query: 311 aagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatc 370 |||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||| Sbjct: 6367 aagggagcttgactgcaagactgactcgtcgagcagggacgaaagtcggccttagtgatc 6426 Query: 371 cgacggtgccgagtggaagggccgtcgctcaacggataaaagttactctagggataacag 430 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6427 cgacggtaccgagtggaagggccgtcgctcaacggataaaagttactctagggataacag 6486 Query: 431 gctgatcttccccaagagtccacatcgacgggaaggtttggcacctc 477 ||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 6487 gctgatcttccccaagagttcacatcgacgggaaggtttggcacctc 6533 Score = 188 bits (95), Expect = 1e-44 Identities = 101/103 (98%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6060 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 6119 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggc 103 |||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 6120 gggattgggtttgggcttttcctgcgcagcttaggtggaaggc 6162
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 414 bits (209), Expect = e-112 Identities = 313/347 (90%), Gaps = 3/347 (0%) Strand = Plus / Plus Query: 131 gagccatcagtgagataccactctggaagagctcggattctaaccttgtgtcagacccgc 190 |||||||||||||||||||||||| || |||| | ||||||||||| |||| ||| Sbjct: 2157 gagccatcagtgagataccactcttgagaagctagaattctaaccttatgtcgtttccg- 2215 Query: 191 gggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaa 250 || |||| | |||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 2216 --gctaaggaaaagtctcaggtagacagtttctatggggcgtaggcctcccaaagggtaa 2273 Query: 251 cggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaaggcag 310 |||||||||||||||||| |||| ||| |||||| || | | | ||||| ||||||| Sbjct: 2274 cggaggcgtgcaaaggttccctcaggctggacggaaatcagccattgagtgtaaaggcaa 2333 Query: 311 aagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatc 370 |||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||| Sbjct: 2334 aagggagcttgactgcaagactgactcgtcgagcagggacgaaagtcggccttagtgatc 2393 Query: 371 cgacggtgccgagtggaagggccgtcgctcaacggataaaagttactctagggataacag 430 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2394 cgacggtaccgagtggaagggccgtcgctcaacggataaaagttactctagggataacag 2453 Query: 431 gctgatcttccccaagagtccacatcgacgggaaggtttggcacctc 477 ||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 2454 gctgatcttccccaagagttcacatcgacgggaaggtttggcacctc 2500 Score = 188 bits (95), Expect = 1e-44 Identities = 101/103 (98%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2027 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 2086 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggc 103 |||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 2087 gggattgggtttgggcttttcctgcgcagcttaggtggaaggc 2129
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 414 bits (209), Expect = e-112 Identities = 313/347 (90%), Gaps = 3/347 (0%) Strand = Plus / Plus Query: 131 gagccatcagtgagataccactctggaagagctcggattctaaccttgtgtcagacccgc 190 |||||||||||||||||||||||| || |||| | ||||||||||| |||| ||| Sbjct: 2157 gagccatcagtgagataccactcttgagaagctagaattctaaccttatgtcgtttccg- 2215 Query: 191 gggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaa 250 || |||| | |||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 2216 --gctaaggaaaagtctcaggtagacagtttctatggggcgtaggcctcccaaagggtaa 2273 Query: 251 cggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaaggcag 310 |||||||||||||||||| |||| ||| |||||| || | | | ||||| ||||||| Sbjct: 2274 cggaggcgtgcaaaggttccctcaggctggacggaaatcagccattgagtgtaaaggcaa 2333 Query: 311 aagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatc 370 |||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||| Sbjct: 2334 aagggagcttgactgcaagactgactcgtcgagcagggacgaaagtcggccttagtgatc 2393 Query: 371 cgacggtgccgagtggaagggccgtcgctcaacggataaaagttactctagggataacag 430 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2394 cgacggtaccgagtggaagggccgtcgctcaacggataaaagttactctagggataacag 2453 Query: 431 gctgatcttccccaagagtccacatcgacgggaaggtttggcacctc 477 ||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 2454 gctgatcttccccaagagttcacatcgacgggaaggtttggcacctc 2500 Score = 188 bits (95), Expect = 1e-44 Identities = 101/103 (98%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2027 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 2086 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggc 103 |||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 2087 gggattgggtttgggcttttcctgcgcagcttaggtggaaggc 2129
>emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022F23, complete sequence Length = 130273 Score = 391 bits (197), Expect = e-105 Identities = 214/222 (96%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 75609 gtgaagatgcggactacctgcacctagacagaaagaccctatgaagctttactgttccct 75550 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75549 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 75490 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75489 gggggggcccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 75430 Query: 181 tcagacccgcgggccaagggacagtctcaggtagacagtttc 222 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 75429 tcagacccgcgggccaagggacagtctcaggtagacagtttc 75388
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 391 bits (197), Expect = e-105 Identities = 310/347 (89%), Gaps = 3/347 (0%) Strand = Plus / Plus Query: 131 gagccatcagtgagataccactctggaagagctcggattctaaccttgtgtcagacccgc 190 ||||||| |||||||||||||||| ||| |||| | || |||||||| ||||| ||| Sbjct: 2152 gagccattagtgagataccactcttgaatagctagaatcctaaccttatgtcatctccg- 2210 Query: 191 gggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaa 250 || |||| | |||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 2211 --gctaaggaaaagtctcaggtagacagtttctatggggcgtaggcctcccaaagggtaa 2268 Query: 251 cggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaaggcag 310 |||||||||||||||||| |||| ||| |||||| || | | ||||| ||||||| Sbjct: 2269 cggaggcgtgcaaaggttccctcaggctggacggaaatcagctattgagtgtaaaggcaa 2328 Query: 311 aagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatc 370 ||||||||||||||| |||||| || ||||||||| ||||||||||||||||||||||| Sbjct: 2329 aagggagcttgactgaaagactgactagtcgagcagggacgaaagtcggccttagtgatc 2388 Query: 371 cgacggtgccgagtggaagggccgtcgctcaacggataaaagttactctagggataacag 430 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2389 cgacggttccgagtggaagggccgtcgctcaacggataaaagttactctagggataacag 2448 Query: 431 gctgatcttccccaagagtccacatcgacgggaaggtttggcacctc 477 ||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 2449 gctgatcttccccaagagttcacatcgacgggaaggtttggcacctc 2495 Score = 165 bits (83), Expect = 2e-37 Identities = 98/103 (95%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2022 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 2081 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggc 103 | |||||| ||||||| ||| ||||||||||||||||||||| Sbjct: 2082 gagattgggtttgggctcttcttgcgcagcttaggtggaaggc 2124
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 377 bits (190), Expect = e-101 Identities = 268/292 (91%), Gaps = 4/292 (1%) Strand = Plus / Plus Query: 199 ggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcg 258 |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 2223 ggacagtctcaggtagacagtttctatggggcgtaggcctcctaaaaagtaacggaggcg 2282 Query: 259 tgcaaa-ggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaagggag 317 |||||| |||||||| ||||| | || || || | | ||||||||||||||||||||| Sbjct: 2283 tgcaaaaggtttcctggggccgg---gagataggccattgagtgcaaaggcagaagggag 2339 Query: 318 cttgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacggt 377 ||||| |||||||| |||||||||||||| ||| ||||| ||||||||||||||| || | Sbjct: 2340 cttgattgcaagacccacccgtcgagcagggactaaagttggccttagtgatccggcgat 2399 Query: 378 gccgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatc 437 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2400 accgagtggaagggtcgtcgctcaacggataaaagttactctagggataacaggctgatc 2459 Query: 438 ttccccaagagtccacatcgacgggaaggtttggcacctcgatgtcggctct 489 ||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 2460 ttccccaagagctcacatcgacgggaaggtttggcacctcgatgtcggctct 2511 Score = 137 bits (69), Expect = 4e-29 Identities = 104/113 (92%), Gaps = 2/113 (1%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaa-gaccctatgaagcttt-actgttcc 58 ||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||| Sbjct: 2035 gtgaagatgcggactactcacacctggacagaaatgaccctatgaagcttttactgttcc 2094 Query: 59 ctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaagg 111 ||||||||| ||| ||||||||||||||||| |||| |||||||||||||||| Sbjct: 2095 ctgggattgacttggggcctttcctgcgcagtttagatggaaggcgaagaagg 2147 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Plus Query: 131 gagccatcagtgagataccactctggaa 158 ||||||| |||||||||||||||||||| Sbjct: 2163 gagccataagtgagataccactctggaa 2190
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 367 bits (185), Expect = 2e-98 Identities = 263/289 (91%) Strand = Plus / Plus Query: 201 acagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcgtg 260 ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2201 acagtttcagatagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcgtg 2260 Query: 261 caaaggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaagggagctt 320 |||||||| ||| | |||||| || || ||||||| ||||||| ||| |||||| Sbjct: 2261 caaaggttctctcagattggacggaaatcaatcttcgagtgtaaaggcaaaagagagctt 2320 Query: 321 gactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacggtgcc 380 |||||||||| || |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2321 gactgcaagaaatacaattcgagcagggacgaaagtcggccttagtgatccgacggtgcc 2380 Query: 381 gagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatcttc 440 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2381 gtgtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatcttc 2440 Query: 441 cccaagagtccacatcgacgggaaggtttggcacctcgatgtcggctct 489 ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 2441 cccaagagttcacatcgacgggaaggtttggcacctcgatgtcggctct 2489 Score = 133 bits (67), Expect = 6e-28 Identities = 94/103 (91%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 2004 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttcttt 2063 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggc 103 | |||||||||||| | || |||||||||||||||| |||| Sbjct: 2064 gaaattggctttgggtttctcttgcgcagcttaggtgggaggc 2106
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 367 bits (185), Expect = 2e-98 Identities = 263/289 (91%) Strand = Plus / Plus Query: 201 acagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcgtg 260 ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5235 acagtttcagatagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcgtg 5294 Query: 261 caaaggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaagggagctt 320 |||||||| ||| | |||||| || || ||||||| ||||||| ||| |||||| Sbjct: 5295 caaaggttctctcagattggacggaaatcaatcttcgagtgtaaaggcaaaagagagctt 5354 Query: 321 gactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacggtgcc 380 |||||||||| || |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 5355 gactgcaagaaatacaattcgagcagggacgaaagtcggccttagtgatccgacggtgcc 5414 Query: 381 gagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatcttc 440 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5415 gtgtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatcttc 5474 Query: 441 cccaagagtccacatcgacgggaaggtttggcacctcgatgtcggctct 489 ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 5475 cccaagagttcacatcgacgggaaggtttggcacctcgatgtcggctct 5523 Score = 125 bits (63), Expect = 1e-25 Identities = 93/103 (90%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 5038 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttcttt 5097 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggc 103 | |||||||||||| | || || ||||||||||||| |||| Sbjct: 5098 gaaattggctttgggtttctcttgtgcagcttaggtgggaggc 5140
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 357 bits (180), Expect = 2e-95 Identities = 207/218 (94%), Gaps = 4/218 (1%) Strand = Plus / Minus Query: 73 gggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttccnnnnnnncccga 132 |||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 116541 gggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttccgggggggcccga 116482 Query: 133 gccatcagtgagataccactctggaagagctcggattctaaccttgtgtcagaccc---- 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 116481 gccatcagtgagataccactctggaagagctcggattctaaccttgtgtcagacccaccc 116422 Query: 189 gcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggt 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 116421 gcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggt 116362 Query: 249 aacggaggcgtgcaaaggtttcctcgggccagacggac 286 |||||||||||||||||||||||||||||||||||||| Sbjct: 116361 aacggaggcgtgcaaaggtttcctcgggccagacggac 116324 Score = 321 bits (162), Expect = 1e-84 Identities = 185/195 (94%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 116731 gtgaagatgcggactacctgcatctggacataaagaccctatgaagctttactgttccct 116672 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 116671 gggattggctttgggcctttcctgcgcagcttaggtggaagacgaagaaggcccccttcc 116612 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 116611 gggggggcccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 116552 Query: 181 tcagacccgcgggcc 195 ||||||||||||||| Sbjct: 116551 tcagacccgcgggcc 116537
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 357 bits (180), Expect = 2e-95 Identities = 419/495 (84%), Gaps = 18/495 (3%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||| ||||| | |||||||||||||||||||||| ||||| ||| |||||| Sbjct: 1919 gtgaagatgcaaactacttacacctggacagaaagaccctattcagcttcactcttccct 1860 Query: 61 gggattggctttgggcctttcctgcgcagctta------ggtggaaggcgaagaaggccc 114 ||||||||||||||||||||| ||| |||| | |||| |||| ||||||||||| Sbjct: 1859 gggattggctttgggcctttcttgcacagcccatggagcggtgaaaggtgaagaaggccc 1800 Query: 115 ccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaac 174 |||||| ||||||||||||||||||||||||||| |||||| | ||||||| Sbjct: 1799 ccttccgggggg-cccgagccatcagtgagataccactcttctagagcttgaattctaat 1741 Query: 175 cttgtgtcag-acccgcgggccaagggacagtctcaggtagacagtttctatggggcgta 233 |||||||||| ||| | |||||| |||||||||||||||||| |||| |||||||||| Sbjct: 1740 cttgtgtcaggacctacaagccaagcgacagtctcaggtagacaatttccatggggcgta 1681 Query: 234 ggcctccc-aaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggt 292 |||||||| ||||||||| |||||||| ||||||||||||| ||||||| ||| ||||| Sbjct: 1680 ggcctccccaaaaggtaatggaggcgtacaaaggtttcctcaggccagatggagattggc 1621 Query: 293 cctcgagtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacga 352 ||||||||| ||||||| |||| ||||| ||| |||||| ||||| | ||| || || Sbjct: 1620 cctcgagtgtaaaggcaaaaggaagcttaactacaagacccaccc----aacagggatga 1565 Query: 353 aagtcggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaag 412 |||||||||||||||||| || ||||||||||||||||| | |||||||||||||||||| Sbjct: 1564 aagtcggccttagtgatctgatggtgccgagtggaagggtcatcgctcaacggataaaag 1505 Query: 413 ttactctagggataacaggctgatctt-ccccaagagtccacatcgacgggaaggtttgg 471 | |||||||| |||| ||||||||||| ||||||||| ||||| |||||||||||| Sbjct: 1504 tgactctaggaataagaggctgatcttcccccaagagctcacat----gggaaggtttgg 1449 Query: 472 cacctcgatgtcggc 486 |||||||| |||||| Sbjct: 1448 cacctcgacgtcggc 1434
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 357 bits (180), Expect = 2e-95 Identities = 207/218 (94%), Gaps = 4/218 (1%) Strand = Plus / Minus Query: 73 gggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttccnnnnnnncccga 132 |||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 56313 gggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttccgggggggcccga 56254 Query: 133 gccatcagtgagataccactctggaagagctcggattctaaccttgtgtcagaccc---- 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 56253 gccatcagtgagataccactctggaagagctcggattctaaccttgtgtcagacccaccc 56194 Query: 189 gcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggt 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 56193 gcgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggt 56134 Query: 249 aacggaggcgtgcaaaggtttcctcgggccagacggac 286 |||||||||||||||||||||||||||||||||||||| Sbjct: 56133 aacggaggcgtgcaaaggtttcctcgggccagacggac 56096 Score = 321 bits (162), Expect = 1e-84 Identities = 185/195 (94%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 56503 gtgaagatgcggactacctgcatctggacataaagaccctatgaagctttactgttccct 56444 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 56443 gggattggctttgggcctttcctgcgcagcttaggtggaagacgaagaaggcccccttcc 56384 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 56383 gggggggcccgagccatcagtgagataccactctggaagagctcggattctaaccttgtg 56324 Query: 181 tcagacccgcgggcc 195 ||||||||||||||| Sbjct: 56323 tcagacccgcgggcc 56309
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 353 bits (178), Expect = 3e-94 Identities = 235/254 (92%) Strand = Plus / Plus Query: 235 gcctcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcc 294 |||||| ||||||||||||||||||||||||||| |||| ||| |||||| || | | Sbjct: 2299 gcctcctaaaaggtaacggaggcgtgcaaaggttccctcaggctggacggaaatcagccg 2358 Query: 295 tcgagtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaa 354 | ||||| ||||||||||||||||||||||||||||||||| ||||||||| | ||||| Sbjct: 2359 tagagtgtaaaggcagaagggagcttgactgcaagactcacaagtcgagcaggggcgaaa 2418 Query: 355 gtcggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagtt 414 | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 2419 gccggccttagtgatccgacggtaccgagtggaagggccgtcgctcaacggataaaagtt 2478 Query: 415 actctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcac 474 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 2479 actctagggataacaggctgatcttccccaagagttcacatcgacgggaaggtttggcac 2538 Query: 475 ctcgatgtcggctc 488 |||||||||||||| Sbjct: 2539 ctcgatgtcggctc 2552 Score = 119 bits (60), Expect = 9e-24 Identities = 93/104 (89%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 2066 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttgactgtagcct 2125 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcg 104 || ||||| ||||||| ||| ||||||| ||||||| ||||| Sbjct: 2126 ggaattgggtttgggctcttcttgcgcagactaggtgggaggcg 2169 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 131 gagccatcagtgagataccactctggaagagctcggattctaa 173 ||||||||||||||| ||||||||||||||||| | ||||||| Sbjct: 2196 gagccatcagtgagagaccactctggaagagctagaattctaa 2238
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 351 bits (177), Expect = 1e-93 Identities = 261/289 (90%) Strand = Plus / Plus Query: 201 acagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcgtg 260 ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2201 acagtttcagatagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcgtg 2260 Query: 261 caaaggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaagggagctt 320 |||||||| ||| | |||||| || || |||||| ||||||| ||| |||||| Sbjct: 2261 caaaggttctctcagattggacggaaatcaatctccgagtgtaaaggcataagagagctt 2320 Query: 321 gactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacggtgcc 380 |||||||||| || |||||||| |||||||||||||||||||||||||||||| || Sbjct: 2321 gactgcaagaaatacaattcgagcagggacgaaagtcggccttagtgatccgacggtacc 2380 Query: 381 gagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatcttc 440 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2381 gtgtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatcttc 2440 Query: 441 cccaagagtccacatcgacgggaaggtttggcacctcgatgtcggctct 489 ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 2441 cccaagagttcacatcgacgggaaggtttggcacctcgatgtcggctct 2489 Score = 133 bits (67), Expect = 6e-28 Identities = 100/111 (90%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 2004 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttcttt 2063 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaagg 111 | |||||||||||| | || |||||||||||||||| | || ||||||| Sbjct: 2064 gaaattggctttgggtttctcttgcgcagcttaggtgggaagcaaagaagg 2114
>gb|L43538.1|CRECPRRNLA Chlamydomonas peterfii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3498 Score = 345 bits (174), Expect = 8e-92 Identities = 255/282 (90%) Strand = Plus / Plus Query: 207 tcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcgtgcaaagg 266 |||||| | |||||| | ||||||| | |||||||||||||||||||||||||||||||| Sbjct: 2305 tcaggtgggcagtttatttggggcgaatgcctcccaaaaggtaacggaggcgtgcaaagg 2364 Query: 267 tttcctcgggccagacggacattggtcctcgagtgcaaaggcagaagggagcttgactgc 326 || |||| | | |||||| || | | | ||||||||||||| |||||||||||||||| Sbjct: 2365 ttccctcagtctggacggaaatcagacattgagtgcaaaggcaaaagggagcttgactgc 2424 Query: 327 aagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacggtgccgagtgg 386 ||||| || ||||||||| | |||||| ||||||||||||||||||||||||| |||| Sbjct: 2425 aagacctacaagtcgagcaggggcgaaagccggccttagtgatccgacggtgccgtgtgg 2484 Query: 387 aagggccgtcgctcaacggataaaagttactctagggataacaggctgatcttccccaag 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2485 aagggccgtcgctcaacggataaaagttactctagggataacaggctgatcttccccaag 2544 Query: 447 agtccacatcgacgggaaggtttggcacctcgatgtcggctc 488 ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 2545 agttcacatcgacgggaaggtttggcacctcgatgtcggctc 2586 Score = 109 bits (55), Expect = 9e-21 Identities = 91/103 (88%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||| | ||||||||||||||||||||||||||||| ||||| | | Sbjct: 2100 gtgaagatgcggactacttacacctggacagaaagaccctatgaagcttgactgtatctt 2159 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggc 103 || ||||| ||||||| |||| |||||||| ||||||| |||| Sbjct: 2160 ggaattgggtttgggcttttcttgcgcagcctaggtgggaggc 2202 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 131 gagccatcagtgagataccactctggaagagct 163 ||||| ||| ||||| ||||||||||||||||| Sbjct: 2230 gagccgtcattgagagaccactctggaagagct 2262
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 345 bits (174), Expect = 8e-92 Identities = 234/254 (92%) Strand = Plus / Plus Query: 235 gcctcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcc 294 |||||||||||||||||||||||||||||||||| |||| ||| |||||| || ||| Sbjct: 2303 gcctcccaaaaggtaacggaggcgtgcaaaggttccctcaggctggacggaaatcagtcg 2362 Query: 295 tcgagtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaa 354 | |||| ||||||||||||||||||||||||||||| || ||||||||| ||||||| Sbjct: 2363 tagagtataaaggcagaagggagcttgactgcaagacctacaagtcgagcagggacgaaa 2422 Query: 355 gtcggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagtt 414 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 2423 gtcggccttagtgatccgacggtgccgtgtggaagggccgtcgctcaacggataaaagtt 2482 Query: 415 actctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcac 474 |||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||| Sbjct: 2483 actctagggataacaggctgatctcccccaagagttcacatcgacggggaggtttggcac 2542 Query: 475 ctcgatgtcggctc 488 |||||||||||||| Sbjct: 2543 ctcgatgtcggctc 2556 Score = 141 bits (71), Expect = 2e-30 Identities = 95/103 (92%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 2070 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgtagcct 2129 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggc 103 || ||||| || |||| ||| ||||||||||||||||||||| Sbjct: 2130 ggaattggtttcgggctcttcttgcgcagcttaggtggaaggc 2172 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Plus Query: 131 gagccatcagtgagataccactctggaagagct 163 ||||||||||||||||||||||||||||||||| Sbjct: 2200 gagccatcagtgagataccactctggaagagct 2232
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 345 bits (174), Expect = 8e-92 Identities = 234/254 (92%) Strand = Plus / Plus Query: 235 gcctcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcc 294 |||||||||||||||||||||||||||||||||| |||| ||| |||||| || ||| Sbjct: 4072 gcctcccaaaaggtaacggaggcgtgcaaaggttccctcaggctggacggaaatcagtcg 4131 Query: 295 tcgagtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaa 354 | |||| ||||||||||||||||||||||||||||| || ||||||||| ||||||| Sbjct: 4132 tagagtataaaggcagaagggagcttgactgcaagacctacaagtcgagcagggacgaaa 4191 Query: 355 gtcggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagtt 414 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 4192 gtcggccttagtgatccgacggtgccgtgtggaagggccgtcgctcaacggataaaagtt 4251 Query: 415 actctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcac 474 |||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||| Sbjct: 4252 actctagggataacaggctgatctcccccaagagttcacatcgacggggaggtttggcac 4311 Query: 475 ctcgatgtcggctc 488 |||||||||||||| Sbjct: 4312 ctcgatgtcggctc 4325 Score = 141 bits (71), Expect = 2e-30 Identities = 95/103 (92%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 3839 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgtagcct 3898 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggc 103 || ||||| || |||| ||| ||||||||||||||||||||| Sbjct: 3899 ggaattggtttcgggctcttcttgcgcagcttaggtggaaggc 3941 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Plus Query: 131 gagccatcagtgagataccactctggaagagct 163 ||||||||||||||||||||||||||||||||| Sbjct: 3969 gagccatcagtgagataccactctggaagagct 4001
>emb|X68887.1|CHCPRRNL1 Chloroplast Chlamydomonas peterfii rrnL gene, exon 1 Length = 2668 Score = 345 bits (174), Expect = 8e-92 Identities = 255/282 (90%) Strand = Plus / Plus Query: 207 tcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcgtgcaaagg 266 |||||| | |||||| | ||||||| | |||||||||||||||||||||||||||||||| Sbjct: 2305 tcaggtgggcagtttatttggggcgaatgcctcccaaaaggtaacggaggcgtgcaaagg 2364 Query: 267 tttcctcgggccagacggacattggtcctcgagtgcaaaggcagaagggagcttgactgc 326 || |||| | | |||||| || | | | ||||||||||||| |||||||||||||||| Sbjct: 2365 ttccctcagtctggacggaaatcagacattgagtgcaaaggcaaaagggagcttgactgc 2424 Query: 327 aagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacggtgccgagtgg 386 ||||| || ||||||||| | |||||| ||||||||||||||||||||||||| |||| Sbjct: 2425 aagacctacaagtcgagcaggggcgaaagccggccttagtgatccgacggtgccgtgtgg 2484 Query: 387 aagggccgtcgctcaacggataaaagttactctagggataacaggctgatcttccccaag 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2485 aagggccgtcgctcaacggataaaagttactctagggataacaggctgatcttccccaag 2544 Query: 447 agtccacatcgacgggaaggtttggcacctcgatgtcggctc 488 ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 2545 agttcacatcgacgggaaggtttggcacctcgatgtcggctc 2586 Score = 109 bits (55), Expect = 9e-21 Identities = 91/103 (88%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||| | ||||||||||||||||||||||||||||| ||||| | | Sbjct: 2100 gtgaagatgcggactacttacacctggacagaaagaccctatgaagcttgactgtatctt 2159 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggc 103 || ||||| ||||||| |||| |||||||| ||||||| |||| Sbjct: 2160 ggaattgggtttgggcttttcttgcgcagcctaggtgggaggc 2202 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 131 gagccatcagtgagataccactctggaagagct 163 ||||| ||| ||||| ||||||||||||||||| Sbjct: 2230 gagccgtcattgagagaccactctggaagagct 2262
>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2604 Score = 341 bits (172), Expect = 1e-90 Identities = 253/280 (90%) Strand = Plus / Plus Query: 208 caggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcgtgcaaaggt 267 |||| ||||||||||| |||||| |||||||||||| |||| |||||||||||||||| Sbjct: 2215 caggcagacagtttctctggggcagaggcctcccaaagagtaatggaggcgtgcaaaggt 2274 Query: 268 ttcctcgggccagacggacattggtcctcgagtgcaaaggcagaagggagcttgactgca 327 | |||| ||| ||||| || || | ||||| ||||||||||||||||||||||||| Sbjct: 2275 tccctcaggctggacgggaatcagttgtagagtgtaaaggcagaagggagcttgactgca 2334 Query: 328 agactcacccgtcgagcagagacgaaagtcggccttagtgatccgacggtgccgagtgga 387 |||| || ||||||||| |||||||||||||||||||||||||||||||||| ||||| Sbjct: 2335 agaccaacaagtcgagcagggacgaaagtcggccttagtgatccgacggtgccgcgtgga 2394 Query: 388 agggccgtcgctcaacggataaaagttactctagggataacaggctgatcttccccaaga 447 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2395 agggccgtcgcttatcggataaaagttactctagggataacaggctgatcttccccaaga 2454 Query: 448 gtccacatcgacgggaaggtttggcacctcgatgtcggct 487 |||||||||||||||||||||||||||||||||||||||| Sbjct: 2455 gtccacatcgacgggaaggtttggcacctcgatgtcggct 2494 Score = 109 bits (55), Expect = 9e-21 Identities = 91/103 (88%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 2010 gtgaagatgcgggctacctccactgggacagaaagaccctatgaagctttactgttccct 2069 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggc 103 || ||||| | | |||| | |||||||||| ||||||| |||| Sbjct: 2070 ggcattgggtctcggccctccctgcgcagcctaggtgggaggc 2112
>gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2901 Score = 341 bits (172), Expect = 1e-90 Identities = 253/280 (90%) Strand = Plus / Plus Query: 208 caggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcgtgcaaaggt 267 |||| ||||||||||| |||||| |||||||||||| |||| |||||||||||||||| Sbjct: 2230 caggcagacagtttctctggggcagaggcctcccaaagagtaatggaggcgtgcaaaggt 2289 Query: 268 ttcctcgggccagacggacattggtcctcgagtgcaaaggcagaagggagcttgactgca 327 | |||| ||| ||||| || || | ||||| ||||||||||||||||||||||||| Sbjct: 2290 tccctcaggctggacgggaatcagttgtagagtgtaaaggcagaagggagcttgactgca 2349 Query: 328 agactcacccgtcgagcagagacgaaagtcggccttagtgatccgacggtgccgagtgga 387 |||| || ||||||||| |||||||||||||||||||||||||||||||||| ||||| Sbjct: 2350 agaccaacaagtcgagcagggacgaaagtcggccttagtgatccgacggtgccgcgtgga 2409 Query: 388 agggccgtcgctcaacggataaaagttactctagggataacaggctgatcttccccaaga 447 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2410 agggccgtcgcttatcggataaaagttactctagggataacaggctgatcttccccaaga 2469 Query: 448 gtccacatcgacgggaaggtttggcacctcgatgtcggct 487 |||||||||||||||||||||||||||||||||||||||| Sbjct: 2470 gtccacatcgacgggaaggtttggcacctcgatgtcggct 2509 Score = 109 bits (55), Expect = 9e-21 Identities = 91/103 (88%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 2024 gtgaagatgcgggctacctccactgggacagaaagaccctatgaagctttactgttccct 2083 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggc 103 || ||||| | | |||| | |||||||||| ||||||| |||| Sbjct: 2084 ggcattgggtctcggccctccctgcgcagcctaggtgggaggc 2126
>gb|AF393598.1| Klebsormidium flaccidum small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and 5S ribosomal RNA (rrf) gene, partial sequence; chloroplast genes for chloroplast products Length = 7627 Score = 341 bits (172), Expect = 1e-90 Identities = 253/280 (90%) Strand = Plus / Plus Query: 208 caggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcgtgcaaaggt 267 |||| ||||||||||| |||||| |||||||||||| |||| |||||||||||||||| Sbjct: 6803 caggcagacagtttctctggggcagaggcctcccaaagagtaatggaggcgtgcaaaggt 6862 Query: 268 ttcctcgggccagacggacattggtcctcgagtgcaaaggcagaagggagcttgactgca 327 | |||| ||| ||||| || || | ||||| ||||||||||||||||||||||||| Sbjct: 6863 tccctcaggctggacgggaatcagttgtagagtgtaaaggcagaagggagcttgactgca 6922 Query: 328 agactcacccgtcgagcagagacgaaagtcggccttagtgatccgacggtgccgagtgga 387 |||| || ||||||||| |||||||||||||||||||||||||||||||||| ||||| Sbjct: 6923 agaccaacaagtcgagcagggacgaaagtcggccttagtgatccgacggtgccgcgtgga 6982 Query: 388 agggccgtcgctcaacggataaaagttactctagggataacaggctgatcttccccaaga 447 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6983 agggccgtcgcttatcggataaaagttactctagggataacaggctgatcttccccaaga 7042 Query: 448 gtccacatcgacgggaaggtttggcacctcgatgtcggct 487 |||||||||||||||||||||||||||||||||||||||| Sbjct: 7043 gtccacatcgacgggaaggtttggcacctcgatgtcggct 7082 Score = 109 bits (55), Expect = 9e-21 Identities = 91/103 (88%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 6597 gtgaagatgcgggctacctccactgggacagaaagaccctatgaagctttactgttccct 6656 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggc 103 || ||||| | | |||| | |||||||||| ||||||| |||| Sbjct: 6657 ggcattgggtctcggccctccctgcgcagcctaggtgggaggc 6699
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 341 bits (172), Expect = 1e-90 Identities = 259/288 (89%) Strand = Plus / Plus Query: 200 gacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcgt 259 ||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| Sbjct: 2171 gacagtctcaggtagacagtttcactggggcagtggcctcccaaaaggtaatggaggcgt 2230 Query: 260 gcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaagggagct 319 ||||||||| |||| ||| |||||| || || ||||||||| ||||||||||||| Sbjct: 2231 gcaaaggttccctcaggctggacggaaatcagttgaggagtgcaaaagcagaagggagct 2290 Query: 320 tgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacggtgc 379 ||||||| ||||| || ||| ||||| ||||||||||||| |||||||||||||||| | Sbjct: 2291 tgactgcgagacttacaagtcaagcagggacgaaagtcggctttagtgatccgacggttc 2350 Query: 380 cgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatctt 439 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2351 catgtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatctt 2410 Query: 440 ccccaagagtccacatcgacgggaaggtttggcacctcgatgtcggct 487 |||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 2411 ccccaagagttcacatcgacgggaaggtttggcacctcgatgtcggct 2458 Score = 139 bits (70), Expect = 1e-29 Identities = 91/98 (92%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 1979 gtgaagatgcggactacctccacctggacagaaagaccctatgaagcttgactgttccct 2038 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtgg 98 ||||| || ||||||| || ||||||||||||||||| Sbjct: 2039 gggatggggtttgggctctttctgcgcagcttaggtgg 2076
>gb|L49148.1|CRECPRGOLF Chlamydomonas mexicana chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4181 Score = 337 bits (170), Expect = 2e-89 Identities = 254/282 (90%) Strand = Plus / Plus Query: 207 tcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcgtgcaaagg 266 |||||| | |||||| | ||||||| | |||||| ||||||||||||||||||||||||| Sbjct: 3034 tcaggtgggcagtttatttggggcgaatgcctcctaaaaggtaacggaggcgtgcaaagg 3093 Query: 267 tttcctcgggccagacggacattggtcctcgagtgcaaaggcagaagggagcttgactgc 326 || |||| | | |||||| || | | | ||||||||||||| |||||||||||||||| Sbjct: 3094 ttccctcagtctggacggaaatcagacattgagtgcaaaggcaaaagggagcttgactgc 3153 Query: 327 aagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacggtgccgagtgg 386 ||||| || ||||||||| | |||||| ||||||||||||||||||||||||| |||| Sbjct: 3154 aagacctacaagtcgagcaggggcgaaagccggccttagtgatccgacggtgccgcgtgg 3213 Query: 387 aagggccgtcgctcaacggataaaagttactctagggataacaggctgatcttccccaag 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3214 aagggccgtcgctcaacggataaaagttactctagggataacaggctgatcttccccaag 3273 Query: 447 agtccacatcgacgggaaggtttggcacctcgatgtcggctc 488 ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 3274 agttcacatcgacgggaaggtttggcacctcgatgtcggctc 3315 Score = 109 bits (55), Expect = 9e-21 Identities = 91/103 (88%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| | | Sbjct: 2829 gtgaagatgcggactacttgcacctggacagaaagaccctatgaagcttgactgtatctt 2888 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggc 103 || ||||| || |||| |||| |||||||| ||||||| |||| Sbjct: 2889 ggaattgggttcgggcttttcttgcgcagcctaggtgggaggc 2931 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 131 gagccatcagtgagataccactctggaagagct 163 ||||| ||| ||||| ||||||||||||||||| Sbjct: 2959 gagccgtcattgagagaccactctggaagagct 2991
>emb|X68911.1|CHCMRRNL2 Chloroplast Chlamydomonas mexicana rrnL gene, exon 2 Length = 664 Score = 337 bits (170), Expect = 2e-89 Identities = 254/282 (90%) Strand = Plus / Plus Query: 207 tcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcgtgcaaagg 266 |||||| | |||||| | ||||||| | |||||| ||||||||||||||||||||||||| Sbjct: 302 tcaggtgggcagtttatttggggcgaatgcctcctaaaaggtaacggaggcgtgcaaagg 361 Query: 267 tttcctcgggccagacggacattggtcctcgagtgcaaaggcagaagggagcttgactgc 326 || |||| | | |||||| || | | | ||||||||||||| |||||||||||||||| Sbjct: 362 ttccctcagtctggacggaaatcagacattgagtgcaaaggcaaaagggagcttgactgc 421 Query: 327 aagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacggtgccgagtgg 386 ||||| || ||||||||| | |||||| ||||||||||||||||||||||||| |||| Sbjct: 422 aagacctacaagtcgagcaggggcgaaagccggccttagtgatccgacggtgccgcgtgg 481 Query: 387 aagggccgtcgctcaacggataaaagttactctagggataacaggctgatcttccccaag 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 482 aagggccgtcgctcaacggataaaagttactctagggataacaggctgatcttccccaag 541 Query: 447 agtccacatcgacgggaaggtttggcacctcgatgtcggctc 488 ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 542 agttcacatcgacgggaaggtttggcacctcgatgtcggctc 583 Score = 109 bits (55), Expect = 9e-21 Identities = 91/103 (88%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| | | Sbjct: 97 gtgaagatgcggactacttgcacctggacagaaagaccctatgaagcttgactgtatctt 156 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggc 103 || ||||| || |||| |||| |||||||| ||||||| |||| Sbjct: 157 ggaattgggttcgggcttttcttgcgcagcctaggtgggaggc 199 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 131 gagccatcagtgagataccactctggaagagct 163 ||||| ||| ||||| ||||||||||||||||| Sbjct: 227 gagccgtcattgagagaccactctggaagagct 259
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 335 bits (169), Expect = 8e-89 Identities = 259/289 (89%) Strand = Plus / Plus Query: 200 gacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcgt 259 |||||| |||||| | |||||| | ||||||| | ||||| |||||||||||||||||| Sbjct: 2437 gacagtttcaggtgggcagtttttctggggcggaaacctcctaaaaggtaacggaggcgt 2496 Query: 260 gcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaagggagct 319 ||||||||| |||| | | |||||| || | | ||||| ||||||||||||||||| Sbjct: 2497 gcaaaggttccctcagtctggacggaaatcagacgaagagtgtaaaggcagaagggagct 2556 Query: 320 tgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacggtgc 379 |||||||||||| || ||||||||| | |||||| ||||||||||||||||||||| | Sbjct: 2557 tgactgcaagacctacaagtcgagcaggggcgaaagccggccttagtgatccgacggtac 2616 Query: 380 cgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatctt 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2617 cgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatctt 2676 Query: 440 ccccaagagtccacatcgacgggaaggtttggcacctcgatgtcggctc 488 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2677 ccccaagagtccacatcgacgggaaggtttggcacctcgatgtcggctc 2725 Score = 113 bits (57), Expect = 6e-22 Identities = 93/105 (88%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||| ||| Sbjct: 2239 gtgaagatgcggacttcctacacctggacagaaagaccctatgaagcttgactgtagcct 2298 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcga 105 || ||||| ||||||| ||| |||||||| ||||||| |||||| Sbjct: 2299 ggaattgggtttgggctcttcttgcgcagcctaggtgggaggcga 2343 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 131 gagccatcagtgagataccactctggaagagctcggattctaa 173 ||||||||||||||| ||||||||||||||||| | ||||||| Sbjct: 2369 gagccatcagtgagagaccactctggaagagctagaattctaa 2411
>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome Length = 203828 Score = 335 bits (169), Expect = 8e-89 Identities = 259/289 (89%) Strand = Plus / Minus Query: 200 gacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcgt 259 |||||| |||||| | |||||| | ||||||| | |||||| |||||||||||||||||| Sbjct: 150141 gacagtttcaggtgggcagtttatttggggcgaatgcctcctaaaaggtaacggaggcgt 150082 Query: 260 gcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaagggagct 319 ||||||||| |||| | | |||||| || | | | ||||| ||||||| ||||||||| Sbjct: 150081 gcaaaggttccctcagtctggacggaaatcagacattgagtgtaaaggcaaaagggagct 150022 Query: 320 tgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacggtgc 379 |||||||||||| || ||||||||| | |||||| ||||||||||||||||||||||| Sbjct: 150021 tgactgcaagacctacaagtcgagcaggggcgaaagccggccttagtgatccgacggtgc 149962 Query: 380 cgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatctt 439 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149961 cgcgtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatctt 149902 Query: 440 ccccaagagtccacatcgacgggaaggtttggcacctcgatgtcggctc 488 |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 149901 ccccaagagttcacatcgacgggaaggtttggcacctcgatgtcggctc 149853 Score = 335 bits (169), Expect = 8e-89 Identities = 259/289 (89%) Strand = Plus / Plus Query: 200 gacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcgt 259 |||||| |||||| | |||||| | ||||||| | |||||| |||||||||||||||||| Sbjct: 44062 gacagtttcaggtgggcagtttatttggggcgaatgcctcctaaaaggtaacggaggcgt 44121 Query: 260 gcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaagggagct 319 ||||||||| |||| | | |||||| || | | | ||||| ||||||| ||||||||| Sbjct: 44122 gcaaaggttccctcagtctggacggaaatcagacattgagtgtaaaggcaaaagggagct 44181 Query: 320 tgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacggtgc 379 |||||||||||| || ||||||||| | |||||| ||||||||||||||||||||||| Sbjct: 44182 tgactgcaagacctacaagtcgagcaggggcgaaagccggccttagtgatccgacggtgc 44241 Query: 380 cgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatctt 439 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44242 cgcgtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatctt 44301 Query: 440 ccccaagagtccacatcgacgggaaggtttggcacctcgatgtcggctc 488 |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 44302 ccccaagagttcacatcgacgggaaggtttggcacctcgatgtcggctc 44350 Score = 117 bits (59), Expect = 4e-23 Identities = 92/103 (89%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| | | Sbjct: 150339 gtgaagatgcggactacctacacctggacagaaagaccctatgaagcttgactgtatctt 150280 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggc 103 || ||||| ||||||| |||| |||||||| ||||||| |||| Sbjct: 150279 ggaattgggtttgggcttttcttgcgcagcctaggtgggaggc 150237 Score = 117 bits (59), Expect = 4e-23 Identities = 92/103 (89%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| | | Sbjct: 43864 gtgaagatgcggactacctacacctggacagaaagaccctatgaagcttgactgtatctt 43923 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggc 103 || ||||| ||||||| |||| |||||||| ||||||| |||| Sbjct: 43924 ggaattgggtttgggcttttcttgcgcagcctaggtgggaggc 43966 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 131 gagccatcagtgagataccactctggaagagct 163 ||||| ||| ||||| ||||||||||||||||| Sbjct: 150209 gagccgtcattgagagaccactctggaagagct 150177 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 131 gagccatcagtgagataccactctggaagagct 163 ||||| ||| ||||| ||||||||||||||||| Sbjct: 43994 gagccgtcattgagagaccactctggaagagct 44026
>emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and 23S rRNA Length = 2603 Score = 335 bits (169), Expect = 8e-89 Identities = 259/289 (89%) Strand = Plus / Plus Query: 200 gacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcgt 259 |||||| |||||| | |||||| | ||||||| | |||||| |||||||||||||||||| Sbjct: 2234 gacagtttcaggtgggcagtttatttggggcgaatgcctcctaaaaggtaacggaggcgt 2293 Query: 260 gcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaagggagct 319 ||||||||| |||| | | |||||| || | | | ||||| ||||||| ||||||||| Sbjct: 2294 gcaaaggttccctcagtctggacggaaatcagacattgagtgtaaaggcaaaagggagct 2353 Query: 320 tgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacggtgc 379 |||||||||||| || ||||||||| | |||||| ||||||||||||||||||||||| Sbjct: 2354 tgactgcaagacctacaagtcgagcaggggcgaaagccggccttagtgatccgacggtgc 2413 Query: 380 cgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatctt 439 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2414 cgcgtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatctt 2473 Query: 440 ccccaagagtccacatcgacgggaaggtttggcacctcgatgtcggctc 488 |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 2474 ccccaagagttcacatcgacgggaaggtttggcacctcgatgtcggctc 2522 Score = 117 bits (59), Expect = 4e-23 Identities = 92/103 (89%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| | | Sbjct: 2036 gtgaagatgcggactacctacacctggacagaaagaccctatgaagcttgactgtatctt 2095 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggc 103 || ||||| ||||||| |||| |||||||| ||||||| |||| Sbjct: 2096 ggaattgggtttgggcttttcttgcgcagcctaggtgggaggc 2138 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 131 gagccatcagtgagataccactctggaagagct 163 ||||| ||| ||||| ||||||||||||||||| Sbjct: 2166 gagccgtcattgagagaccactctggaagagct 2198
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 335 bits (169), Expect = 8e-89 Identities = 259/289 (89%) Strand = Plus / Plus Query: 200 gacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcgt 259 |||||| |||||| | |||||| | ||||||| | |||||| |||||||||||||||||| Sbjct: 2245 gacagtttcaggtgggcagtttatttggggcgaatgcctcctaaaaggtaacggaggcgt 2304 Query: 260 gcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaagggagct 319 ||||||||| |||| | | |||||| || | | | ||||| ||||||| ||||||||| Sbjct: 2305 gcaaaggttccctcagtctggacggaaatcagacattgagtgtaaaggcaaaagggagct 2364 Query: 320 tgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacggtgc 379 |||||||||||| || ||||||||| | |||||| ||||||||||||||||||||||| Sbjct: 2365 tgactgcaagacctacaagtcgagcaggggcgaaagccggccttagtgatccgacggtgc 2424 Query: 380 cgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatctt 439 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2425 cgcgtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatctt 2484 Query: 440 ccccaagagtccacatcgacgggaaggtttggcacctcgatgtcggctc 488 |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 2485 ccccaagagttcacatcgacgggaaggtttggcacctcgatgtcggctc 2533 Score = 117 bits (59), Expect = 4e-23 Identities = 92/103 (89%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| | | Sbjct: 2047 gtgaagatgcggactacctacacctggacagaaagaccctatgaagcttgactgtatctt 2106 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggc 103 || ||||| ||||||| |||| |||||||| ||||||| |||| Sbjct: 2107 ggaattgggtttgggcttttcttgcgcagcctaggtgggaggc 2149
>gb|AF041468.1| Guillardia theta complete plastid genome Length = 121524 Score = 329 bits (166), Expect = 5e-87 Identities = 232/254 (91%) Strand = Plus / Minus Query: 235 gcctcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcc 294 |||||| ||||||||||||||||||||||||||| |||| ||| | |||||| ||| Sbjct: 38203 gcctcctaaaaggtaacggaggcgtgcaaaggttccctcaggctggttggacatcagtcg 38144 Query: 295 tcgagtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaa 354 ||||| ||||||| |||||||||||||||| |||| ||| ||||||||||||||||| Sbjct: 38143 aagagtgtaaaggcataagggagcttgactgcgagacccacaagtcgagcagagacgaaa 38084 Query: 355 gtcggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagtt 414 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 38083 gtcggccttagtgatccgacggttccgagtggaagggccgtcgctcaacggataaaagtt 38024 Query: 415 actctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcac 474 |||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||| Sbjct: 38023 actctagggataacaggctgatctcccccaagagttcacatcgacggggaggtttggcac 37964 Query: 475 ctcgatgtcggctc 488 |||||||||||||| Sbjct: 37963 ctcgatgtcggctc 37950 Score = 329 bits (166), Expect = 5e-87 Identities = 232/254 (91%) Strand = Plus / Plus Query: 235 gcctcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcc 294 |||||| ||||||||||||||||||||||||||| |||| ||| | |||||| ||| Sbjct: 21197 gcctcctaaaaggtaacggaggcgtgcaaaggttccctcaggctggttggacatcagtcg 21256 Query: 295 tcgagtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaa 354 ||||| ||||||| |||||||||||||||| |||| ||| ||||||||||||||||| Sbjct: 21257 aagagtgtaaaggcataagggagcttgactgcgagacccacaagtcgagcagagacgaaa 21316 Query: 355 gtcggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagtt 414 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 21317 gtcggccttagtgatccgacggttccgagtggaagggccgtcgctcaacggataaaagtt 21376 Query: 415 actctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcac 474 |||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||| Sbjct: 21377 actctagggataacaggctgatctcccccaagagttcacatcgacggggaggtttggcac 21436 Query: 475 ctcgatgtcggctc 488 |||||||||||||| Sbjct: 21437 ctcgatgtcggctc 21450 Score = 109 bits (55), Expect = 9e-21 Identities = 55/55 (100%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgt 55 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 38435 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgt 38381 Score = 109 bits (55), Expect = 9e-21 Identities = 55/55 (100%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgt 55 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20965 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgt 21019
>gb|L43354.1|CRECPRRNLE Chlamydomonas iyengarii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3923 Score = 327 bits (165), Expect = 2e-86 Identities = 258/289 (89%) Strand = Plus / Plus Query: 200 gacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcgt 259 |||||| |||||| | |||||| | ||||||| | ||||| ||||||||||||||| || Sbjct: 2307 gacagtttcaggtgggcagtttatttggggcgaatacctcctaaaaggtaacggaggtgt 2366 Query: 260 gcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaagggagct 319 ||||||||| |||| | | |||||| || | | | ||||| ||||||| ||||||||| Sbjct: 2367 gcaaaggttccctcagtctggacggaaatcagacattgagtgtaaaggcaaaagggagct 2426 Query: 320 tgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacggtgc 379 |||||||||||| || ||||||||| | |||||| ||||||||||||||||||||||| Sbjct: 2427 tgactgcaagacctacaagtcgagcaggggcgaaagccggccttagtgatccgacggtgc 2486 Query: 380 cgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatctt 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2487 cgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatctt 2546 Query: 440 ccccaagagtccacatcgacgggaaggtttggcacctcgatgtcggctc 488 |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 2547 ccccaagagttcacatcgacgggaaggtttggcacctcgatgtcggctc 2595 Score = 111 bits (56), Expect = 2e-21 Identities = 92/104 (88%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| | | Sbjct: 2109 gtgaagatgcggactacctacacctggacagaaagaccctatgaagcttgactgtatctt 2168 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcg 104 || ||||| || |||| |||| |||||||| ||||||| ||||| Sbjct: 2169 ggaattgggttcgggcttttcttgcgcagcctaggtgggaggcg 2212 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 131 gagccatcagtgagataccactctggaagagct 163 ||||||||||||||| ||||||||||||||||| Sbjct: 2239 gagccatcagtgagagaccactctggaagagct 2271
>emb|X68885.1|CHCIRRNL1 Chloroplast Chlamydomonas iyengarii rrnL gene, exon 1 Length = 2676 Score = 327 bits (165), Expect = 2e-86 Identities = 258/289 (89%) Strand = Plus / Plus Query: 200 gacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcgt 259 |||||| |||||| | |||||| | ||||||| | ||||| ||||||||||||||| || Sbjct: 2307 gacagtttcaggtgggcagtttatttggggcgaatacctcctaaaaggtaacggaggtgt 2366 Query: 260 gcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaagggagct 319 ||||||||| |||| | | |||||| || | | | ||||| ||||||| ||||||||| Sbjct: 2367 gcaaaggttccctcagtctggacggaaatcagacattgagtgtaaaggcaaaagggagct 2426 Query: 320 tgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacggtgc 379 |||||||||||| || ||||||||| | |||||| ||||||||||||||||||||||| Sbjct: 2427 tgactgcaagacctacaagtcgagcaggggcgaaagccggccttagtgatccgacggtgc 2486 Query: 380 cgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatctt 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2487 cgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatctt 2546 Query: 440 ccccaagagtccacatcgacgggaaggtttggcacctcgatgtcggctc 488 |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 2547 ccccaagagttcacatcgacgggaaggtttggcacctcgatgtcggctc 2595 Score = 111 bits (56), Expect = 2e-21 Identities = 92/104 (88%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| | | Sbjct: 2109 gtgaagatgcggactacctacacctggacagaaagaccctatgaagcttgactgtatctt 2168 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcg 104 || ||||| || |||| |||| |||||||| ||||||| ||||| Sbjct: 2169 ggaattgggttcgggcttttcttgcgcagcctaggtgggaggcg 2212 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 131 gagccatcagtgagataccactctggaagagct 163 ||||||||||||||| ||||||||||||||||| Sbjct: 2239 gagccatcagtgagagaccactctggaagagct 2271
>gb|L42862.1|PNFCPRGOL Pycnococcus sp. CCMP 1203 large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2664 Score = 325 bits (164), Expect = 8e-86 Identities = 257/288 (89%) Strand = Plus / Plus Query: 201 acagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcgtg 260 |||||||||||||| |||||| ||||||| |||||| ||||||||||||||||||| Sbjct: 2268 acagtctcaggtaggcagtttgactggggcggtcgcctcctaaaaggtaacggaggcgtg 2327 Query: 261 caaaggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaagggagctt 320 |||||||| |||| ||| |||||| || ||| | |||| |||||||||||||||||| Sbjct: 2328 caaaggttccctcaggctggacggaaatcagtcgtagagtataaaggcagaagggagctt 2387 Query: 321 gactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacggtgcc 380 |||||| ||||| || |||| ||||| | |||||| ||||||||||||||||||||| || Sbjct: 2388 gactgcgagactgacacgtcaagcaggggcgaaagccggccttagtgatccgacggttcc 2447 Query: 381 gagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatcttc 440 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 2448 gtgtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatctcc 2507 Query: 441 cccaagagtccacatcgacgggaaggtttggcacctcgatgtcggctc 488 ||||||||| |||||||||||| ||||||||||||||||||||||||| Sbjct: 2508 cccaagagttcacatcgacggggaggtttggcacctcgatgtcggctc 2555 Score = 117 bits (59), Expect = 4e-23 Identities = 92/103 (89%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | | Sbjct: 2070 gtgaagatgcggactacctgcacttggacagaaagaccctatgaagctttactgtagctt 2129 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggc 103 | |||||| | |||| |||| |||||||||||||||| |||| Sbjct: 2130 gagattgggctcgggcttttcttgcgcagcttaggtgggaggc 2172 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 131 gagccatcagtgagataccactct 154 ||||| |||||||||||||||||| Sbjct: 2200 gagccgtcagtgagataccactct 2223
>emb|AM084276.1| Compsopogon coeruleus chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 36.94 Length = 4420 Score = 325 bits (164), Expect = 8e-86 Identities = 257/288 (89%) Strand = Plus / Plus Query: 201 acagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcgtg 260 |||||||| ||||| |||||| ||||||| |||||| ||||||||||||||||||| Sbjct: 3882 acagtctctggtaggcagtttgactggggcggtcgcctcctaaaaggtaacggaggcgtg 3941 Query: 261 caaaggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaagggagctt 320 |||||||| |||| | | | |||| || ||| | ||||| ||||| | |||||||||| Sbjct: 3942 caaaggttccctcagactggtcggaaatcagtcgtagagtgtaaaggtataagggagctt 4001 Query: 321 gactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacggtgcc 380 ||||||||||| || |||||||||||||||||||||||||||||||||||||||| || Sbjct: 4002 gactgcaagacctacaagtcgagcagagacgaaagtcggccttagtgatccgacggttcc 4061 Query: 381 gagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatcttc 440 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 4062 gagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatctcc 4121 Query: 441 cccaagagtccacatcgacgggaaggtttggcacctcgatgtcggctc 488 ||||||||| |||||||||||| ||||||||||||||||||||||||| Sbjct: 4122 cccaagagttcacatcgacggggaggtttggcacctcgatgtcggctc 4169 Score = 117 bits (59), Expect = 4e-23 Identities = 92/103 (89%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct: 3684 gtgaagatgcggactacctgcaccaggacagaaagaccctatgaagctttactgtagctt 3743 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggc 103 | |||||| || |||| |||| |||||||| ||||||| |||| Sbjct: 3744 gagattgggttcgggcttttcttgcgcagcataggtgggaggc 3786 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 131 gagccatcagtgagataccactctggaagagct 163 |||| ||||||||||||||||||| ||| |||| Sbjct: 3814 gagctatcagtgagataccactctagaaaagct 3846
>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2632 Score = 321 bits (162), Expect = 1e-84 Identities = 231/254 (90%) Strand = Plus / Plus Query: 235 gcctcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcc 294 |||||| ||||||||||||||||||||||||||| |||| ||| |||||| || | | Sbjct: 2273 gcctcctaaaaggtaacggaggcgtgcaaaggttccctcaggctggacggaaatcagccg 2332 Query: 295 tcgagtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaa 354 | ||||| |||||||||||||||||||||||| |||| || ||||||||| | ||||| Sbjct: 2333 tagagtgtaaaggcagaagggagcttgactgcgagacctacaagtcgagcaggggcgaaa 2392 Query: 355 gtcggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagtt 414 | ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 2393 gccggccttagtgatccgacggttccgtgtggaagggccgtcgctcaacggataaaagtt 2452 Query: 415 actctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcac 474 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 2453 actctagggataacaggctgatcttccccaagagttcacatcgacgggaaggtttggcac 2512 Query: 475 ctcgatgtcggctc 488 |||||||||||||| Sbjct: 2513 ctcgatgtcggctc 2526 Score = 103 bits (52), Expect = 5e-19 Identities = 91/104 (87%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||| |||||||| ||||||||||||||||||||||||||||||| ||| | | | Sbjct: 2040 gtgaagatccggactacttgcacctggacagaaagaccctatgaagcttgactataactt 2099 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcg 104 |||||||| |||||||| ||| ||||||| ||||||| ||||| Sbjct: 2100 gggattgggtttgggcccttcttgcgcagtctaggtgggaggcg 2143 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 131 gagccatcagtgagataccactctggaag 159 ||||||||||||||| ||||||||||||| Sbjct: 2170 gagccatcagtgagagaccactctggaag 2198
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 321 bits (162), Expect = 1e-84 Identities = 231/254 (90%) Strand = Plus / Plus Query: 235 gcctcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcc 294 |||||| ||||||||||||||||||||||||||| |||| ||| |||||| || | Sbjct: 2209 gcctcctaaaaggtaacggaggcgtgcaaaggttccctccggctggacggaaatcagctg 2268 Query: 295 tcgagtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaa 354 | ||||| |||||||||||||||||||||||| |||| || ||||||||| ||||||| Sbjct: 2269 tagagtgtaaaggcagaagggagcttgactgcgagacctacaagtcgagcagggacgaaa 2328 Query: 355 gtcggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagtt 414 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 2329 gtcggccttagtgatccgacggtgccgtgtggaagggccgtcgctcaacggataaaagtt 2388 Query: 415 actctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcac 474 |||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||| Sbjct: 2389 actctagggataacaggctgatctcccccaagagttcacatcgacggggaggtttggcac 2448 Query: 475 ctcgatgtcggctc 488 |||||||||||||| Sbjct: 2449 ctcgatgtcggctc 2462 Score = 143 bits (72), Expect = 6e-31 Identities = 96/104 (92%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1978 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgtagcct 2037 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcg 104 || ||||| || |||| ||| |||||||||||||||||||||| Sbjct: 2038 ggaattgggttcgggctcttcttgcgcagcttaggtggaaggcg 2081 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 131 gagccatcagtgagataccactctggaagagctcggattctaa 173 |||||| |||||||||||||||||||||||||| | ||||||| Sbjct: 2108 gagccaccagtgagataccactctggaagagctagaattctaa 2150
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 321 bits (162), Expect = 1e-84 Identities = 231/254 (90%) Strand = Plus / Plus Query: 235 gcctcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcc 294 |||||| ||||||||||||||||||||||||||| | || ||| |||||| || | | Sbjct: 2237 gcctcctaaaaggtaacggaggcgtgcaaaggttccttcaggctggacggaaatcagccg 2296 Query: 295 tcgagtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaa 354 | |||| ||||| ||||||||||||||||||||||| ||| ||||||||| ||||||| Sbjct: 2297 tagagtataaaggtagaagggagcttgactgcaagacccacaagtcgagcagggacgaaa 2356 Query: 355 gtcggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagtt 414 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 2357 gtcggccttagtgatccgacggtaccgagtggaagggccgtcgctcaacggataaaagtt 2416 Query: 415 actctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcac 474 |||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||| Sbjct: 2417 actctagggataacaggctgatctcccccaagagttcacatcgacggggaggtttggcac 2476 Query: 475 ctcgatgtcggctc 488 |||||||||||||| Sbjct: 2477 ctcgatgtcggctc 2490 Score = 163 bits (82), Expect = 7e-37 Identities = 141/163 (86%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 2005 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgtaacct 2064 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 || ||||| ||||||| ||| |||||||||||||||||||||| ||||| |||||| Sbjct: 2065 ggaattgggtttgggctcttcttgcgcagcttaggtggaaggcgttgaaggtatccttcc 2124 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagct 163 | |||||| |||||||||||||||||||||||||| Sbjct: 2125 ggggatactggagccaacagtgagataccactctggaagagct 2167
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 321 bits (162), Expect = 1e-84 Identities = 231/254 (90%) Strand = Plus / Minus Query: 235 gcctcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcc 294 |||||| ||||||||||||||||||||||||||| | || ||| |||||| || | | Sbjct: 113426 gcctcctaaaaggtaacggaggcgtgcaaaggttccttcaggctggacggaaatcagccg 113367 Query: 295 tcgagtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaa 354 | |||| ||||| ||||||||||||||||||||||| ||| ||||||||| ||||||| Sbjct: 113366 tagagtataaaggtagaagggagcttgactgcaagacccacaagtcgagcagggacgaaa 113307 Query: 355 gtcggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagtt 414 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 113306 gtcggccttagtgatccgacggtaccgagtggaagggccgtcgctcaacggataaaagtt 113247 Query: 415 actctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcac 474 |||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||| Sbjct: 113246 actctagggataacaggctgatctcccccaagagttcacatcgacggggaggtttggcac 113187 Query: 475 ctcgatgtcggctc 488 |||||||||||||| Sbjct: 113186 ctcgatgtcggctc 113173 Score = 321 bits (162), Expect = 1e-84 Identities = 231/254 (90%) Strand = Plus / Plus Query: 235 gcctcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcc 294 |||||| ||||||||||||||||||||||||||| | || ||| |||||| || | | Sbjct: 88562 gcctcctaaaaggtaacggaggcgtgcaaaggttccttcaggctggacggaaatcagccg 88621 Query: 295 tcgagtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaa 354 | |||| ||||| ||||||||||||||||||||||| ||| ||||||||| ||||||| Sbjct: 88622 tagagtataaaggtagaagggagcttgactgcaagacccacaagtcgagcagggacgaaa 88681 Query: 355 gtcggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagtt 414 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 88682 gtcggccttagtgatccgacggtaccgagtggaagggccgtcgctcaacggataaaagtt 88741 Query: 415 actctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcac 474 |||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||| Sbjct: 88742 actctagggataacaggctgatctcccccaagagttcacatcgacggggaggtttggcac 88801 Query: 475 ctcgatgtcggctc 488 |||||||||||||| Sbjct: 88802 ctcgatgtcggctc 88815 Score = 163 bits (82), Expect = 7e-37 Identities = 141/163 (86%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 113658 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgtaacct 113599 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 || ||||| ||||||| ||| |||||||||||||||||||||| ||||| |||||| Sbjct: 113598 ggaattgggtttgggctcttcttgcgcagcttaggtggaaggcgttgaaggtatccttcc 113539 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagct 163 | |||||| |||||||||||||||||||||||||| Sbjct: 113538 ggggatactggagccaacagtgagataccactctggaagagct 113496 Score = 163 bits (82), Expect = 7e-37 Identities = 141/163 (86%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 88330 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgtaacct 88389 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 || ||||| ||||||| ||| |||||||||||||||||||||| ||||| |||||| Sbjct: 88390 ggaattgggtttgggctcttcttgcgcagcttaggtggaaggcgttgaaggtatccttcc 88449 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagct 163 | |||||| |||||||||||||||||||||||||| Sbjct: 88450 ggggatactggagccaacagtgagataccactctggaagagct 88492
>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; chloroplast genes for chloroplast products Length = 5057 Score = 321 bits (162), Expect = 1e-84 Identities = 231/254 (90%) Strand = Plus / Plus Query: 235 gcctcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcc 294 |||||| ||||||||||||||||||||||||||| |||| ||| |||||| || | | Sbjct: 4156 gcctcctaaaaggtaacggaggcgtgcaaaggttccctcaggctggacggaaatcagccg 4215 Query: 295 tcgagtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaa 354 | ||||| |||||||||||||||||||||||| |||| || ||||||||| | ||||| Sbjct: 4216 tagagtgtaaaggcagaagggagcttgactgcgagacctacaagtcgagcaggggcgaaa 4275 Query: 355 gtcggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagtt 414 | ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 4276 gccggccttagtgatccgacggttccgtgtggaagggccgtcgctcaacggataaaagtt 4335 Query: 415 actctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcac 474 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 4336 actctagggataacaggctgatcttccccaagagttcacatcgacgggaaggtttggcac 4395 Query: 475 ctcgatgtcggctc 488 |||||||||||||| Sbjct: 4396 ctcgatgtcggctc 4409 Score = 103 bits (52), Expect = 5e-19 Identities = 91/104 (87%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||| |||||||| ||||||||||||||||||||||||||||||| ||| | | | Sbjct: 3923 gtgaagatccggactacttgcacctggacagaaagaccctatgaagcttgactataactt 3982 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcg 104 |||||||| |||||||| ||| ||||||| ||||||| ||||| Sbjct: 3983 gggattgggtttgggcccttcttgcgcagtctaggtgggaggcg 4026 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 131 gagccatcagtgagataccactctggaag 159 ||||||||||||||| ||||||||||||| Sbjct: 4053 gagccatcagtgagagaccactctggaag 4081
>gb|L42860.1|CGZCPRGOL Chlorogonium elongatum chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CelI gene Length = 3779 Score = 319 bits (161), Expect = 5e-84 Identities = 257/289 (88%) Strand = Plus / Plus Query: 200 gacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcgt 259 |||||| |||||| | |||||| | ||||||| | |||||| ||||||||||||||| || Sbjct: 3385 gacagtttcaggtgggcagtttatctggggcggatgcctcctaaaaggtaacggaggtgt 3444 Query: 260 gcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaagggagct 319 ||||||||| |||| | | |||||| || | | | ||||| ||||||| ||||||||| Sbjct: 3445 gcaaaggttccctcagcctggacggaaatcaggcattgagtgtaaaggcaaaagggagct 3504 Query: 320 tgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacggtgc 379 |||||||||||| || ||||||||| | |||||| ||||||||||||||||||||| | Sbjct: 3505 tgactgcaagacctacaagtcgagcaggggcgaaagccggccttagtgatccgacggtac 3564 Query: 380 cgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatctt 439 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3565 cgtgtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatctt 3624 Query: 440 ccccaagagtccacatcgacgggaaggtttggcacctcgatgtcggctc 488 |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 3625 ccccaagagttcacatcgacgggaaggtttggcacctcgatgtcggctc 3673 Score = 131 bits (66), Expect = 2e-27 Identities = 137/163 (84%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||| Sbjct: 3187 gtgaagatgcggactacctgcaccaggacagaaagaccctatgaagcttgactgtatcct 3246 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 || ||||| || |||| |||| |||||||| ||||||| |||| | ||||| ||||||| Sbjct: 3247 ggaattgggttcgggcttttcttgcgcagcctaggtgggaggctatgaaggttcccttcc 3306 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagct 163 | ||||||||| ||||| ||||||||||||||||| Sbjct: 3307 gggggaacatgagccatcattgagagaccactctggaagagct 3349
>gb|L42850.1|PMKCPRGOL Pleurastrum terrestre large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2786 Score = 319 bits (161), Expect = 5e-84 Identities = 257/289 (88%) Strand = Plus / Plus Query: 200 gacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcgt 259 ||||||||||||| | |||||||| ||||||| || ||||| ||||||||||||||| || Sbjct: 2392 gacagtctcaggtgggcagtttctttggggcgaagacctcctaaaaggtaacggaggtgt 2451 Query: 260 gcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaagggagct 319 ||||||||| | || ||| |||||| || ||| ||||| |||| | ||||||||| Sbjct: 2452 gcaaaggttccttcaggctggacggaaatcagtcgaagagtgtaaagatataagggagct 2511 Query: 320 tgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacggtgc 379 |||||||||||| || ||||||||| | |||||| ||||||||||||||||||||| | Sbjct: 2512 tgactgcaagacctacaagtcgagcaggggcgaaagccggccttagtgatccgacggttc 2571 Query: 380 cgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatctt 439 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2572 cgtgtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatctt 2631 Query: 440 ccccaagagtccacatcgacgggaaggtttggcacctcgatgtcggctc 488 |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 2632 ccccaagagttcacatcgacgggaaggtttggcacctcgatgtcggctc 2680 Score = 85.7 bits (43), Expect = 1e-13 Identities = 52/55 (94%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgt 55 ||||||||||||||| || |||||||||||||||||||||||||||||| ||||| Sbjct: 2194 gtgaagatgcggacttcccgcacctggacagaaagaccctatgaagcttgactgt 2248 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 131 gagccatcagtgagataccactctggaagagctcggattctaa 173 ||||||||||||||| ||||||||||| ||||| | ||||||| Sbjct: 2324 gagccatcagtgagagaccactctggacgagctagaattctaa 2366
>gb|L42986.1|RTCCPRGOLA Carteria lunzensis Length = 4448 Score = 313 bits (158), Expect = 3e-82 Identities = 251/282 (89%) Strand = Plus / Plus Query: 207 tcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcgtgcaaagg 266 |||||| | |||||| | ||||||| | ||||| |||||||||| |||||||||||||| Sbjct: 3273 tcaggtgggcagtttatttggggcgaatgcctcataaaaggtaactgaggcgtgcaaagg 3332 Query: 267 tttcctcgggccagacggacattggtcctcgagtgcaaaggcagaagggagcttgactgc 326 || ||| ||| |||||| || | | | ||||||||| ||||||| |||||||||||| Sbjct: 3333 ttctctcaggctggacggaaatcagccgtggagtgcaaaagcagaagagagcttgactgc 3392 Query: 327 aagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacggtgccgagtgg 386 ||||| || ||||||||| |||||||| ||| ||||||||||||||||||||||||| Sbjct: 3393 aagacctacaagtcgagcaggtacgaaagtaggctttagtgatccgacggtgccgagtgg 3452 Query: 387 aagggccgtcgctcaacggataaaagttactctagggataacaggctgatcttccccaag 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3453 aagggccgtcgctcaacggataaaagttactctagggataacaggctgatcttccccaag 3512 Query: 447 agtccacatcgacgggaaggtttggcacctcgatgtcggctc 488 ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 3513 agttcacatcgacgggaaggtttggcacctcgatgtcggctc 3554 Score = 109 bits (55), Expect = 9e-21 Identities = 91/103 (88%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 3068 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttgactgtatcct 3127 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggc 103 || || || ||||||| || |||||||| ||||||| |||| Sbjct: 3128 ggaatagggtttgggctcatcttgcgcagcctaggtgggaggc 3170 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 131 gagccatcagtgagataccactctggaagagct 163 ||||||||| ||||| ||||||||||||||||| Sbjct: 3198 gagccatcattgagagaccactctggaagagct 3230
>gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4038 Score = 313 bits (158), Expect = 3e-82 Identities = 248/278 (89%) Strand = Plus / Plus Query: 200 gacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcgt 259 |||||| |||||| | |||||| | ||||||| | |||||| |||||||||||||||||| Sbjct: 2296 gacagtttcaggtgggcagtttatttggggcgaatgcctcctaaaaggtaacggaggcgt 2355 Query: 260 gcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaagggagct 319 ||||||||| |||| | | |||||| || | | | ||||| ||||||| ||||||||| Sbjct: 2356 gcaaaggttccctcagtctggacggaaatcagacattgagtgtaaaggcaaaagggagct 2415 Query: 320 tgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacggtgc 379 |||||||||||| || ||||||||| | |||||| ||||||||||||||||||||||| Sbjct: 2416 tgactgcaagacctacaagtcgagcaggggcgaaagccggccttagtgatccgacggtgc 2475 Query: 380 cgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatctt 439 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2476 cgtgtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatctt 2535 Query: 440 ccccaagagtccacatcgacgggaaggtttggcacctc 477 |||||||||| ||||||||||||||||||||||||||| Sbjct: 2536 ccccaagagttcacatcgacgggaaggtttggcacctc 2573 Score = 119 bits (60), Expect = 9e-24 Identities = 93/104 (89%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| | | Sbjct: 2098 gtgaagatgcggactacctacacctggacagaaagaccctatgaagcttgactgtatctt 2157 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcg 104 || ||||| ||||||| |||| |||||||| ||||||| ||||| Sbjct: 2158 ggaattgggtttgggcttttcttgcgcagcctaggtgggaggcg 2201 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 131 gagccatcagtgagataccactctggaagagct 163 ||||||||| ||||| ||||||||||||||||| Sbjct: 2228 gagccatcattgagagaccactctggaagagct 2260
>gb|L42988.1|CRECPRGOLB Chlamydomonas applanata large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2863 Score = 313 bits (158), Expect = 3e-82 Identities = 251/282 (89%) Strand = Plus / Plus Query: 207 tcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcgtgcaaagg 266 |||||| | |||||| | ||||||| | |||||| ||| |||||||||| ||||||||| Sbjct: 2232 tcaggtgggcagtttatctggggcggatgcctcctaaagtgtaacggaggtgtgcaaagg 2291 Query: 267 tttcctcgggccagacggacattggtcctcgagtgcaaaggcagaagggagcttgactgc 326 || |||| | | |||||| || | ||| ||||| ||||||| |||||||||||||||| Sbjct: 2292 ttccctcagcctggacggaaatcaggccttgagtgtaaaggcaaaagggagcttgactgc 2351 Query: 327 aagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacggtgccgagtgg 386 ||||| || ||||||||| | |||||| ||||||||||||||||||||||||| |||| Sbjct: 2352 aagacctacaagtcgagcaggggcgaaagccggccttagtgatccgacggtgccgtgtgg 2411 Query: 387 aagggccgtcgctcaacggataaaagttactctagggataacaggctgatcttccccaag 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2412 aagggccgtcgctcaacggataaaagttactctagggataacaggctgatcttccccaag 2471 Query: 447 agtccacatcgacgggaaggtttggcacctcgatgtcggctc 488 ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 2472 agttcacatcgacgggaaggtttggcacctcgatgtcggctc 2513 Score = 117 bits (59), Expect = 4e-23 Identities = 92/103 (89%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 2027 gtgaagatgcggactacttgcacctggacagaaagaccctatgaagcttgactgtatcct 2086 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggc 103 || ||||| || |||| |||| |||||||| ||||||| |||| Sbjct: 2087 ggaattggtttcgggcttttcttgcgcagcctaggtgggaggc 2129
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 313 bits (158), Expect = 3e-82 Identities = 230/254 (90%) Strand = Plus / Plus Query: 235 gcctcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcc 294 |||||| ||||||||||||||||||||||||||| |||| ||| |||||| || | | Sbjct: 2260 gcctcctaaaaggtaacggaggcgtgcaaaggttccctcaggctggacggaaatcagcct 2319 Query: 295 tcgagtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaa 354 ||||| |||||||||||||||||||||||||||||| || ||| ||||| | ||||| Sbjct: 2320 aagagtgtaaaggcagaagggagcttgactgcaagacttacaagtcaagcaggggcgaaa 2379 Query: 355 gtcggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagtt 414 | ||||||||||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 2380 gccggccttagtgatccgacggtaccccgtggaagggccgtcgctcaacggataaaagtt 2439 Query: 415 actctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcac 474 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 2440 actctagggataacaggctgatcttccccaagagttcacatcgacgggaaggtttggcac 2499 Query: 475 ctcgatgtcggctc 488 |||||||||||||| Sbjct: 2500 ctcgatgtcggctc 2513 Score = 117 bits (59), Expect = 4e-23 Identities = 92/103 (89%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 2027 gtgaagatgcggacttcctgcacctggacagaaagaccctatgaagctttactgtagcct 2086 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggc 103 || ||||| ||||||| || |||||||| ||||||| |||| Sbjct: 2087 ggaattgggtttgggctctttttgcgcagcctaggtgggaggc 2129 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 131 gagccatcagtgagataccactctggaagagct 163 ||||||||||||||| |||||||| ||||||| Sbjct: 2157 gagccatcagtgagagaccactctaaaagagct 2189
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 313 bits (158), Expect = 3e-82 Identities = 230/254 (90%) Strand = Plus / Minus Query: 235 gcctcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcc 294 |||||| ||| ||||||||||||| ||||||||| |||| ||| | |||| || | | Sbjct: 2332592 gcctcctaaatggtaacggaggcgcgcaaaggttccctcaggctggtcggaaatcagccg 2332533 Query: 295 tcgagtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaa 354 | ||||||||||||| ||||||||||||||||||||| || ||||||||||||||||| Sbjct: 2332532 tagagtgcaaaggcataagggagcttgactgcaagacctacaagtcgagcagagacgaaa 2332473 Query: 355 gtcggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagtt 414 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 2332472 gtcggccttagtgatccgacggttccgcgtggaagggccgtcgctcaacggataaaagtt 2332413 Query: 415 actctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcac 474 |||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||| Sbjct: 2332412 actctagggataacaggctgatctcccccaagagttcacatcgacggggaggtttggcac 2332353 Query: 475 ctcgatgtcggctc 488 |||||||||||||| Sbjct: 2332352 ctcgatgtcggctc 2332339 Score = 107 bits (54), Expect = 3e-20 Identities = 87/98 (88%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| Sbjct: 2332824 gtgaagatgcggactacctgcacccggacagaaagaccctatgaagctttactgtagcct 2332765 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtgg 98 || ||||| || |||| || | ||||||| ||||||| Sbjct: 2332764 ggaattgggttcgggctttgcttgcgcaggataggtgg 2332727 Score = 40.1 bits (20), Expect = 6.6 Identities = 35/40 (87%) Strand = Plus / Minus Query: 138 cagtgagataccactctggaagagctcggattctaacctt 177 ||||||||||||||||||| | ||| | ||||||||||| Sbjct: 2332687 cagtgagataccactctggcaaggctagaattctaacctt 2332648
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 311 bits (157), Expect = 1e-81 Identities = 229/253 (90%) Strand = Plus / Plus Query: 236 cctcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcct 295 ||||| ||||||||||||||| ||||||||||| |||| ||| |||||| || | | | Sbjct: 2252 cctcctaaaaggtaacggaggtgtgcaaaggttccctcaggctggacggaaatcagccgt 2311 Query: 296 cgagtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaag 355 ||||| ||||||||||||||||||||||||||||| || ||||||||| | |||||| Sbjct: 2312 agagtgtaaaggcagaagggagcttgactgcaagacctacaagtcgagcaggggcgaaag 2371 Query: 356 tcggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagtta 415 ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 2372 ccggccttagtgatccgacggttccatgtggaagggccgtcgctcaacggataaaagtta 2431 Query: 416 ctctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacc 475 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 2432 ctctagggataacaggctgatcttccccaagagttcacatcgacgggaaggtttggcacc 2491 Query: 476 tcgatgtcggctc 488 ||||||||||||| Sbjct: 2492 tcgatgtcggctc 2504 Score = 111 bits (56), Expect = 2e-21 Identities = 92/104 (88%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | | Sbjct: 2018 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttgactgtagctt 2077 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcg 104 || ||||| || |||| ||| |||||||| ||||||| ||||| Sbjct: 2078 ggaattgggttcgggctcttcttgcgcagcctaggtgggaggcg 2121 Score = 46.1 bits (23), Expect = 0.11 Identities = 38/43 (88%) Strand = Plus / Plus Query: 131 gagccatcagtgagataccactctggaagagctcggattctaa 173 |||||| |||||||| ||||||||||| ||||| | ||||||| Sbjct: 2148 gagccaacagtgagagaccactctggaggagctagaattctaa 2190
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 311 bits (157), Expect = 1e-81 Identities = 229/253 (90%) Strand = Plus / Plus Query: 236 cctcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcct 295 ||||| ||||||||||||||| ||||||||||| |||| ||| |||||| || | | | Sbjct: 27061 cctcctaaaaggtaacggaggtgtgcaaaggttccctcaggctggacggaaatcagccgt 27120 Query: 296 cgagtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaag 355 ||||| ||||||||||||||||||||||||||||| || ||||||||| | |||||| Sbjct: 27121 agagtgtaaaggcagaagggagcttgactgcaagacctacaagtcgagcaggggcgaaag 27180 Query: 356 tcggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagtta 415 ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 27181 ccggccttagtgatccgacggttccatgtggaagggccgtcgctcaacggataaaagtta 27240 Query: 416 ctctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacc 475 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 27241 ctctagggataacaggctgatcttccccaagagttcacatcgacgggaaggtttggcacc 27300 Query: 476 tcgatgtcggctc 488 ||||||||||||| Sbjct: 27301 tcgatgtcggctc 27313 Score = 111 bits (56), Expect = 2e-21 Identities = 92/104 (88%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | | Sbjct: 26827 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttgactgtagctt 26886 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcg 104 || ||||| || |||| ||| |||||||| ||||||| ||||| Sbjct: 26887 ggaattgggttcgggctcttcttgcgcagcctaggtgggaggcg 26930 Score = 46.1 bits (23), Expect = 0.11 Identities = 38/43 (88%) Strand = Plus / Plus Query: 131 gagccatcagtgagataccactctggaagagctcggattctaa 173 |||||| |||||||| ||||||||||| ||||| | ||||||| Sbjct: 26957 gagccaacagtgagagaccactctggaggagctagaattctaa 26999
>emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene, exon 1 Length = 2572 Score = 311 bits (157), Expect = 1e-81 Identities = 247/277 (89%) Strand = Plus / Plus Query: 200 gacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcgt 259 |||||| |||||| | |||||| | ||||||| | |||||| |||||||||||||||||| Sbjct: 2296 gacagtttcaggtgggcagtttatttggggcgaatgcctcctaaaaggtaacggaggcgt 2355 Query: 260 gcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaagggagct 319 ||||||||| |||| | | |||||| || | | | ||||| ||||||| ||||||||| Sbjct: 2356 gcaaaggttccctcagtctggacggaaatcagacattgagtgtaaaggcaaaagggagct 2415 Query: 320 tgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacggtgc 379 |||||||||||| || ||||||||| | |||||| ||||||||||||||||||||||| Sbjct: 2416 tgactgcaagacctacaagtcgagcaggggcgaaagccggccttagtgatccgacggtgc 2475 Query: 380 cgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatctt 439 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2476 cgtgtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatctt 2535 Query: 440 ccccaagagtccacatcgacgggaaggtttggcacct 476 |||||||||| |||||||||||||||||||||||||| Sbjct: 2536 ccccaagagttcacatcgacgggaaggtttggcacct 2572 Score = 119 bits (60), Expect = 9e-24 Identities = 93/104 (89%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| | | Sbjct: 2098 gtgaagatgcggactacctacacctggacagaaagaccctatgaagcttgactgtatctt 2157 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcg 104 || ||||| ||||||| |||| |||||||| ||||||| ||||| Sbjct: 2158 ggaattgggtttgggcttttcttgcgcagcctaggtgggaggcg 2201 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 131 gagccatcagtgagataccactctggaagagct 163 ||||||||| ||||| ||||||||||||||||| Sbjct: 2228 gagccatcattgagagaccactctggaagagct 2260
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 309 bits (156), Expect = 5e-81 Identities = 260/293 (88%), Gaps = 5/293 (1%) Strand = Plus / Plus Query: 199 ggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcg 258 ||||||||| |||||||||||||||||||||||||||||||| |||| | ||||||||| Sbjct: 2158 ggacagtcttaggtagacagtttctatggggcgtaggcctcctaaaaagcaacggaggca 2217 Query: 259 tgcaaa--ggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaaggga 316 |||||| |||||||| ||||||| || || || | | ||||||||||||| |||||| Sbjct: 2218 tgcaaaaaggtttcctggggccaggcg---ataggccattgagtgcaaaggcataaggga 2274 Query: 317 gcttgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacgg 376 |||||| ||||||||||| ||||||||||| ||| ||||| ||||||||||||||| || Sbjct: 2275 gcttgattgcaagactcatccgtcgagcagggactaaagttggccttagtgatccggcga 2334 Query: 377 tgccgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgat 436 | | |||||| |||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2335 tactgagtgggagggtcgttgctcaacggataaaagttactctagggataacaggctgat 2394 Query: 437 cttccccaagagtccacatcgacgggaaggtttggcacctcgatgtcggctct 489 |||||||||||| |||| ||||||||||||||||||||||||||||| |||| Sbjct: 2395 cttccccaagagctcacaccgacgggaaggtttggcacctcgatgtcgactct 2447 Score = 99.6 bits (50), Expect = 8e-18 Identities = 78/86 (90%), Gaps = 1/86 (1%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttt-actgttccc 59 |||||||||| |||||| |||||||||| ||||||||||||||||||| ||||||||| Sbjct: 1979 gtgaagatgcagactactcacacctggacaaaaagaccctatgaagcttttactgttccc 2038 Query: 60 tgggattggctttgggcctttcctgc 85 |||||||| ||| ||||||||||||| Sbjct: 2039 tgggattgacttggggcctttcctgc 2064 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 agtgagataccactctggaa 158 |||||||||||||||||||| Sbjct: 2106 agtgagataccactctggaa 2125
>gb|L43504.1|CRECPRRNLM Chlamydomonas starrii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3455 Score = 309 bits (156), Expect = 5e-81 Identities = 249/280 (88%) Strand = Plus / Plus Query: 200 gacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcgt 259 |||||| |||||| | |||||| | ||||||| | ||||| ||||||||||||||| || Sbjct: 2473 gacagtttcaggtgggcagtttatttggggcgaatacctcctaaaaggtaacggaggtgt 2532 Query: 260 gcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaagggagct 319 ||||||||| |||| | | |||||| || | | | ||||| ||||||| ||||||||| Sbjct: 2533 gcaaaggttccctcagtctggacggaaatcagacattgagtgtaaaggcaaaagggagct 2592 Query: 320 tgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacggtgc 379 |||||||||||| || ||||||||| | |||||| ||||||||||||||||||||||| Sbjct: 2593 tgactgcaagacctacaagtcgagcaggggcgaaagccggccttagtgatccgacggtgc 2652 Query: 380 cgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatctt 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2653 cgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatctt 2712 Query: 440 ccccaagagtccacatcgacgggaaggtttggcacctcga 479 |||||||||| ||||||||||||||||||||||||||||| Sbjct: 2713 ccccaagagttcacatcgacgggaaggtttggcacctcga 2752 Score = 111 bits (56), Expect = 2e-21 Identities = 92/104 (88%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| | | Sbjct: 2275 gtgaagatgcggactacctacacctggacagaaagaccctatgaagcttgactgtatctt 2334 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcg 104 || ||||| || |||| |||| |||||||| ||||||| ||||| Sbjct: 2335 ggaattgggttcgggcttttcttgcgcagcctaggtgggaggcg 2378 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 131 gagccatcagtgagataccactctggaagagctcggattctaa 173 ||||||||||||||| ||||||||||||||||| | ||||||| Sbjct: 2405 gagccatcagtgagagaccactctggaagagctagaattctaa 2447
>gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2704 Score = 309 bits (156), Expect = 5e-81 Identities = 228/252 (90%) Strand = Plus / Plus Query: 237 ctcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctc 296 |||| |||||||||||||| ||||||||||| |||| ||| |||||| || | | Sbjct: 2344 ctcctaaaaggtaacggagatgtgcaaaggttccctcaggctggacggaaatcagccgaa 2403 Query: 297 gagtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagt 356 ||||| ||||||||||||||||||||||||||||| || ||||||||| | |||||| Sbjct: 2404 gagtgtaaaggcagaagggagcttgactgcaagacctacaagtcgagcaggggcgaaagc 2463 Query: 357 cggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttac 416 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 2464 cggccttagtgatccgacggtaccgagtggaagggccgtcgctcaacggataaaagttac 2523 Query: 417 tctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacct 476 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 2524 tctagggataacaggctgatcttccccaagagttcacatcgacgggaaggtttggcacct 2583 Query: 477 cgatgtcggctc 488 |||||||||||| Sbjct: 2584 cgatgtcggctc 2595 Score = 95.6 bits (48), Expect = 1e-16 Identities = 69/76 (90%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 2109 gtgaagatgcggacttcctacacctggacagaaagaccctatgaagctttactgtagcct 2168 Query: 61 gggattggctttgggc 76 | ||||| ||||||| Sbjct: 2169 gaaattgggtttgggc 2184 Score = 46.1 bits (23), Expect = 0.11 Identities = 38/43 (88%) Strand = Plus / Plus Query: 131 gagccatcagtgagataccactctggaagagctcggattctaa 173 ||||||||||||||| ||||||||| | ||||| | ||||||| Sbjct: 2239 gagccatcagtgagagaccactctgaaggagctagaattctaa 2281
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 307 bits (155), Expect = 2e-80 Identities = 224/247 (90%) Strand = Plus / Plus Query: 242 aaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagtg 301 ||||||||||||||||||||||||||| |||| | | |||||| || | | | ||||| Sbjct: 5326 aaaaggtaacggaggcgtgcaaaggttccctcagtctggacggaaatcagacattgagtg 5385 Query: 302 caaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggcc 361 ||||||| ||||| ||||||||||||||| || ||||||||| | |||||| ||||| Sbjct: 5386 taaaggcaaaagggggcttgactgcaagacctacaagtcgagcaggggcgaaagccggcc 5445 Query: 362 ttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactctag 421 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 5446 ttagtgatccgacggtgccgcgtggaagggccgtcgctcaacggataaaagttactctag 5505 Query: 422 ggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgatg 481 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 5506 ggataacaggctgatcttccccaagagttcacatcgacgggaaggtttggcacctcgatg 5565 Query: 482 tcggctc 488 ||||||| Sbjct: 5566 tcggctc 5572 Score = 117 bits (59), Expect = 4e-23 Identities = 92/103 (89%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| | | Sbjct: 4666 gtgaagatgcggactacctacacctggacagaaagaccctatgaagcttgactgtatctt 4725 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggc 103 || ||||| ||||||| |||| |||||||| ||||||| |||| Sbjct: 4726 ggaattgggtttgggcttttcttgcgcagcctaggtgggaggc 4768 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 131 gagccatcagtgagataccactctggaagagct 163 ||||| ||| ||||| ||||||||||||||||| Sbjct: 4796 gagccgtcattgagagaccactctggaagagct 4828
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 305 bits (154), Expect = 7e-80 Identities = 229/254 (90%) Strand = Plus / Minus Query: 235 gcctcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcc 294 |||||| ||||||||||||||||||||||||||| |||| ||| |||||| || | Sbjct: 169205 gcctcctaaaaggtaacggaggcgtgcaaaggttccctcaggctggacggaaatcagctg 169146 Query: 295 tcgagtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaa 354 ||||| ||||||| ||||||||||||||||||||| || ||||||||| ||||||| Sbjct: 169145 gcgagtataaaggcataagggagcttgactgcaagacctacaagtcgagcagggacgaaa 169086 Query: 355 gtcggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagtt 414 ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 169085 gtcggtcttagtgatccgacggtgccgcgtggaagggccgtcgctcaacggataaaagtt 169026 Query: 415 actctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcac 474 |||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||| Sbjct: 169025 actctagggataacaggctgatctcccccaagagttcacatcgacggggaggtttggcac 168966 Query: 475 ctcgatgtcggctc 488 |||||||||||||| Sbjct: 168965 ctcgatgtcggctc 168952 Score = 305 bits (154), Expect = 7e-80 Identities = 229/254 (90%) Strand = Plus / Plus Query: 235 gcctcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcc 294 |||||| ||||||||||||||||||||||||||| |||| ||| |||||| || | Sbjct: 123721 gcctcctaaaaggtaacggaggcgtgcaaaggttccctcaggctggacggaaatcagctg 123780 Query: 295 tcgagtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaa 354 ||||| ||||||| ||||||||||||||||||||| || ||||||||| ||||||| Sbjct: 123781 gcgagtataaaggcataagggagcttgactgcaagacctacaagtcgagcagggacgaaa 123840 Query: 355 gtcggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagtt 414 ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 123841 gtcggtcttagtgatccgacggtgccgcgtggaagggccgtcgctcaacggataaaagtt 123900 Query: 415 actctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcac 474 |||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||| Sbjct: 123901 actctagggataacaggctgatctcccccaagagttcacatcgacggggaggtttggcac 123960 Query: 475 ctcgatgtcggctc 488 |||||||||||||| Sbjct: 123961 ctcgatgtcggctc 123974 Score = 127 bits (64), Expect = 4e-26 Identities = 94/104 (90%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 169437 gtgaagatgcggactaccttcacctggacagaaagaccctatgaagctttactgtagcct 169378 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcg 104 | ||||| ||||||| || |||||||||||||||||||||| Sbjct: 169377 gacattgggtttgggctcgtcttgcgcagcttaggtggaaggcg 169334 Score = 127 bits (64), Expect = 4e-26 Identities = 94/104 (90%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 123489 gtgaagatgcggactaccttcacctggacagaaagaccctatgaagctttactgtagcct 123548 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcg 104 | ||||| ||||||| || |||||||||||||||||||||| Sbjct: 123549 gacattgggtttgggctcgtcttgcgcagcttaggtggaaggcg 123592
>gb|AY673996.1| Gracilaria tenuistipitata var. liui chloroplast, complete genome Length = 183883 Score = 305 bits (154), Expect = 7e-80 Identities = 229/254 (90%) Strand = Plus / Minus Query: 235 gcctcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcc 294 |||||| ||||||||||||||||| |||||||||||||| ||| | |||| || ||| Sbjct: 25590 gcctcctaaaaggtaacggaggcgcgcaaaggtttcctcaggctggtcggaaatcagtcg 25531 Query: 295 tcgagtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaa 354 | ||||| ||||||| |||| |||||||||||||||| ||| ||||||||||||||||| Sbjct: 25530 tagagtgtaaaggcataaggaagcttgactgcaagacccacaagtcgagcagagacgaaa 25471 Query: 355 gtcggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagtt 414 |||||||||||||||||||| || | |||||||| ||| ||||||||||||||||||||| Sbjct: 25470 gtcggccttagtgatccgacagtactgagtggaaaggctgtcgctcaacggataaaagtt 25411 Query: 415 actctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcac 474 |||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||| Sbjct: 25410 actctagggataacaggctgatctcccccaagagttcacatcgacggggaggtttggcac 25351 Query: 475 ctcgatgtcggctc 488 |||||||||||||| Sbjct: 25350 ctcgatgtcggctc 25337 Score = 109 bits (55), Expect = 9e-21 Identities = 55/55 (100%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgt 55 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 25824 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgt 25770
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 305 bits (154), Expect = 7e-80 Identities = 229/254 (90%) Strand = Plus / Minus Query: 235 gcctcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcc 294 |||||| ||||||||||||||||| ||||||||| |||| ||| | ||| || | | Sbjct: 2049695 gcctcctaaaaggtaacggaggcgcgcaaaggttccctcaggctggttggaaatcagccg 2049636 Query: 295 tcgagtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaa 354 | ||||||||||||||||||||||||||||||||||| || |||| |||| ||||||| Sbjct: 2049635 tagagtgcaaaggcagaagggagcttgactgcaagacctacaagtcgcgcagggacgaaa 2049576 Query: 355 gtcggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagtt 414 |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| Sbjct: 2049575 gtcggccttagtgatccgacggcgctgagtggaagggccgtcgctcaacggataaaagtt 2049516 Query: 415 actctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcac 474 |||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||| Sbjct: 2049515 actctagggataacaggctgatctcccccaagagttcacatcgacggggaggtttggcac 2049456 Query: 475 ctcgatgtcggctc 488 |||||||||||||| Sbjct: 2049455 ctcgatgtcggctc 2049442 Score = 305 bits (154), Expect = 7e-80 Identities = 229/254 (90%) Strand = Plus / Plus Query: 235 gcctcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcc 294 |||||| ||||||||||||||||| ||||||||| |||| ||| | ||| || | | Sbjct: 1451806 gcctcctaaaaggtaacggaggcgcgcaaaggttccctcaggctggttggaaatcagccg 1451865 Query: 295 tcgagtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaa 354 | ||||||||||||||||||||||||||||||||||| || |||| |||| ||||||| Sbjct: 1451866 tagagtgcaaaggcagaagggagcttgactgcaagacctacaagtcgcgcagggacgaaa 1451925 Query: 355 gtcggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagtt 414 |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| Sbjct: 1451926 gtcggccttagtgatccgacggcgctgagtggaagggccgtcgctcaacggataaaagtt 1451985 Query: 415 actctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcac 474 |||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||| Sbjct: 1451986 actctagggataacaggctgatctcccccaagagttcacatcgacggggaggtttggcac 1452045 Query: 475 ctcgatgtcggctc 488 |||||||||||||| Sbjct: 1452046 ctcgatgtcggctc 1452059 Score = 123 bits (62), Expect = 6e-25 Identities = 89/98 (90%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 2049928 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgtagcct 2049869 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtgg 98 |||||||| || |||| || | ||||||| ||||||| Sbjct: 2049868 gggattgggttcgggctttgcttgcgcaggataggtgg 2049831 Score = 109 bits (55), Expect = 9e-21 Identities = 55/55 (100%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgt 55 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1451573 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgt 1451627 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 140 gtgagataccactctggaagagctcggattctaac 174 ||||||||||||||||| |||||| | |||||||| Sbjct: 1451712 gtgagataccactctggcagagctagaattctaac 1451746
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 305 bits (154), Expect = 7e-80 Identities = 229/254 (90%) Strand = Plus / Plus Query: 235 gcctcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcc 294 |||||| ||||||||||||||||| ||||||||| |||| | | | ||| || ||| Sbjct: 2314457 gcctcctaaaaggtaacggaggcgcgcaaaggttccctcagactggttggaaatcagtcg 2314516 Query: 295 tcgagtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaa 354 | ||||||||||||| ||||||||||||||||||||| || ||||||||| ||||||| Sbjct: 2314517 tagagtgcaaaggcataagggagcttgactgcaagacctacaagtcgagcagggacgaaa 2314576 Query: 355 gtcggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagtt 414 |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| Sbjct: 2314577 gtcggccttagtgatccgacggcgctgagtggaagggccgtcgctcaacggataaaagtt 2314636 Query: 415 actctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcac 474 |||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||| Sbjct: 2314637 actctagggataacaggctgatctcccccaagagttcacatcgacggggaggtttggcac 2314696 Query: 475 ctcgatgtcggctc 488 |||||||||||||| Sbjct: 2314697 ctcgatgtcggctc 2314710 Score = 305 bits (154), Expect = 7e-80 Identities = 229/254 (90%) Strand = Plus / Minus Query: 235 gcctcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcc 294 |||||| ||||||||||||||||| ||||||||| |||| | | | ||| || ||| Sbjct: 1107390 gcctcctaaaaggtaacggaggcgcgcaaaggttccctcagactggttggaaatcagtcg 1107331 Query: 295 tcgagtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaa 354 | ||||||||||||| ||||||||||||||||||||| || ||||||||| ||||||| Sbjct: 1107330 tagagtgcaaaggcataagggagcttgactgcaagacctacaagtcgagcagggacgaaa 1107271 Query: 355 gtcggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagtt 414 |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| Sbjct: 1107270 gtcggccttagtgatccgacggcgctgagtggaagggccgtcgctcaacggataaaagtt 1107211 Query: 415 actctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcac 474 |||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||| Sbjct: 1107210 actctagggataacaggctgatctcccccaagagttcacatcgacggggaggtttggcac 1107151 Query: 475 ctcgatgtcggctc 488 |||||||||||||| Sbjct: 1107150 ctcgatgtcggctc 1107137 Score = 123 bits (62), Expect = 6e-25 Identities = 89/98 (90%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 2314224 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgtagcct 2314283 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtgg 98 || ||||| || ||||||| | ||||||| ||||||| Sbjct: 2314284 ggaattgggttcgggccttgcttgcgcaggataggtgg 2314321 Score = 123 bits (62), Expect = 6e-25 Identities = 89/98 (90%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1107623 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgtagcct 1107564 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtgg 98 || ||||| || ||||||| | ||||||| ||||||| Sbjct: 1107563 ggaattgggttcgggccttgcttgcgcaggataggtgg 1107526
>gb|L42991.1|CRECPRGOLE Chlamydomonas radiata chloroplast large subunit ribosomal RNA (rrnL) gene Length = 2792 Score = 305 bits (154), Expect = 7e-80 Identities = 250/282 (88%) Strand = Plus / Plus Query: 207 tcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcgtgcaaagg 266 |||||| | |||||| | ||||||| | ||||| ||| ||||||||||||| ||||||| Sbjct: 2405 tcaggtgggcagtttttctggggcggaaacctcctaaagggtaacggaggcgcgcaaagg 2464 Query: 267 tttcctcgggccagacggacattggtcctcgagtgcaaaggcagaagggagcttgactgc 326 || |||| | | || ||| || | | | ||||| |||||||||||||||||||| ||| Sbjct: 2465 ttccctcagtctggatggaaatcagacattgagtgtaaaggcagaagggagcttgattgc 2524 Query: 327 aagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacggtgccgagtgg 386 ||||| || |||||||| | |||||| |||||||||||||||||||||||||||||| Sbjct: 2525 aagacctacaagtcgagcaagggcgaaagccggccttagtgatccgacggtgccgagtgg 2584 Query: 387 aagggccgtcgctcaacggataaaagttactctagggataacaggctgatcttccccaag 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2585 aagggccgtcgctcaacggataaaagttactctagggataacaggctgatcttccccaag 2644 Query: 447 agtccacatcgacgggaaggtttggcacctcgatgtcggctc 488 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 2645 agtccacatcgacgggaaggtttggcacctcgatgtcggctc 2686 Score = 101 bits (51), Expect = 2e-18 Identities = 90/103 (87%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||| Sbjct: 2200 gtgaagatgcggactacctacacctggacagaaagaccctatgaagcttgactgtatcct 2259 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggc 103 || ||||| ||| || |||| ||||||| ||||||| |||| Sbjct: 2260 ggaattgggtttcggtttttcttgcgcagtctaggtgggaggc 2302 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 131 gagccatcagtgagataccactctggaaga 160 ||||||||||||||| |||||||||||||| Sbjct: 2330 gagccatcagtgagagaccactctggaaga 2359
>gb|L42859.1|CRECPRGOL Chlamydomonas mutabilis chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmuI gene Length = 3744 Score = 305 bits (154), Expect = 7e-80 Identities = 250/282 (88%) Strand = Plus / Plus Query: 207 tcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcgtgcaaagg 266 |||||| | |||||| | ||||||| | ||||| ||| ||||||||||||| ||||||| Sbjct: 3357 tcaggtgggcagtttttctggggcggaaacctcctaaagggtaacggaggcgcgcaaagg 3416 Query: 267 tttcctcgggccagacggacattggtcctcgagtgcaaaggcagaagggagcttgactgc 326 || |||| | | || ||| || | | | ||||| |||||||||||||||||||| ||| Sbjct: 3417 ttccctcagtctggatggaaatcagacattgagtgtaaaggcagaagggagcttgattgc 3476 Query: 327 aagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacggtgccgagtgg 386 ||||| || |||||||| | |||||| |||||||||||||||||||||||||||||| Sbjct: 3477 aagacctacaagtcgagcaagggcgaaagccggccttagtgatccgacggtgccgagtgg 3536 Query: 387 aagggccgtcgctcaacggataaaagttactctagggataacaggctgatcttccccaag 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3537 aagggccgtcgctcaacggataaaagttactctagggataacaggctgatcttccccaag 3596 Query: 447 agtccacatcgacgggaaggtttggcacctcgatgtcggctc 488 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 3597 agtccacatcgacgggaaggtttggcacctcgatgtcggctc 3638 Score = 87.7 bits (44), Expect = 3e-14 Identities = 62/68 (91%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||| Sbjct: 3152 gtgaagatgcggactaccatcacctggacagaaagaccctatgaagcttgactgtatcct 3211 Query: 61 gggattgg 68 || ||||| Sbjct: 3212 ggaattgg 3219 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 131 gagccatcagtgagataccactctgga 157 ||||||||||||||| ||||||||||| Sbjct: 3282 gagccatcagtgagagaccactctgga 3308
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 305 bits (154), Expect = 7e-80 Identities = 229/254 (90%) Strand = Plus / Plus Query: 235 gcctcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcc 294 |||||| ||||||||||||||||||||||||||| |||| ||| |||||| || | Sbjct: 2312 gcctcctaaaaggtaacggaggcgtgcaaaggttccctcaggctggacggaaatcagctg 2371 Query: 295 tcgagtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaa 354 ||||| ||||||| ||||||||||||||||||||| || ||||||||| ||||||| Sbjct: 2372 gcgagtataaaggcataagggagcttgactgcaagacctacaagtcgagcagggacgaaa 2431 Query: 355 gtcggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagtt 414 ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 2432 gtcggtcttagtgatccgacggtgccgcgtggaagggccgtcgctcaacggataaaagtt 2491 Query: 415 actctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcac 474 |||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||| Sbjct: 2492 actctagggataacaggctgatctcccccaagagttcacatcgacggggaggtttggcac 2551 Query: 475 ctcgatgtcggctc 488 |||||||||||||| Sbjct: 2552 ctcgatgtcggctc 2565 Score = 127 bits (64), Expect = 4e-26 Identities = 94/104 (90%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 2080 gtgaagatgcggactaccttcacctggacagaaagaccctatgaagctttactgtagcct 2139 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcg 104 | ||||| ||||||| || |||||||||||||||||||||| Sbjct: 2140 gacattgggtttgggctcgtcttgcgcagcttaggtggaaggcg 2183
>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94 Length = 4290 Score = 305 bits (154), Expect = 7e-80 Identities = 229/254 (90%) Strand = Plus / Plus Query: 235 gcctcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcc 294 |||||| ||||||||||||||||||||||||||| |||| ||| | |||| || ||| Sbjct: 3781 gcctcctaaaaggtaacggaggcgtgcaaaggttccctcaggctggtcggaaatcagtcg 3840 Query: 295 tcgagtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaa 354 | ||||| ||||| | ||||||||||||||||||||| || ||||||||||||||||| Sbjct: 3841 tagagtgtaaaggtataagggagcttgactgcaagacctacaagtcgagcagagacgaaa 3900 Query: 355 gtcggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagtt 414 |||||||||||||||||| | || |||||||||||||| ||||||||||||||||||||| Sbjct: 3901 gtcggccttagtgatccggcagtaccgagtggaagggctgtcgctcaacggataaaagtt 3960 Query: 415 actctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcac 474 |||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||| Sbjct: 3961 actctagggataacaggctgatctcccccaagagttcacatcgacggggaggtttggcac 4020 Query: 475 ctcgatgtcggctc 488 |||||||||||||| Sbjct: 4021 ctcgatgtcggctc 4034 Score = 109 bits (55), Expect = 9e-21 Identities = 55/55 (100%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgt 55 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3547 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgt 3601 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Plus Query: 131 gagccatcagtgagataccactct 154 |||||||||||||||||||||||| Sbjct: 3677 gagccatcagtgagataccactct 3700
>gb|L43353.1|CRECPRRNLD Chlamydomonas geitleri chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4406 Score = 303 bits (153), Expect = 3e-79 Identities = 255/289 (88%) Strand = Plus / Plus Query: 200 gacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcgt 259 |||||| |||||| | |||||| | ||||||| | |||||| ||| ||||||||||||| Sbjct: 3744 gacagtttcaggtgggcagtttatctggggcggatgcctcctaaagcgtaacggaggcgt 3803 Query: 260 gcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaagggagct 319 ||||||||| ||| | | |||||| || | | | ||||||||||||| ||| ||||| Sbjct: 3804 gcaaaggttctctcagtctggacggaaatcagacattgagtgcaaaggcaaaagagagct 3863 Query: 320 tgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacggtgc 379 |||||| ||||| || ||||||||| | |||||| ||||||||||||||||||||||| Sbjct: 3864 tgactgtaagaccaacaagtcgagcaggggcgaaagccggccttagtgatccgacggtgc 3923 Query: 380 cgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatctt 439 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3924 cgtgtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatctt 3983 Query: 440 ccccaagagtccacatcgacgggaaggtttggcacctcgatgtcggctc 488 |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 3984 ccccaagagttcacatcgacgggaaggtttggcacctcgatgtcggctc 4032 Score = 123 bits (62), Expect = 6e-25 Identities = 136/163 (83%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||| Sbjct: 3546 gtgaagatgcggactacctacacctggacagaaagaccctatgaagcttgactgtatcct 3605 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 || ||||| || |||| |||| |||||||| ||||||| |||| | ||||| ||||||| Sbjct: 3606 ggaattgggttcgggcttttcttgcgcagcctaggtgggaggctatgaaggttcccttcc 3665 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagct 163 ||||||||| ||||| ||||||||||||||||| Sbjct: 3666 gggggaatttgagccatcattgagagaccactctggaagagct 3708
>emb|X68892.1|CHCGRRNL2 Chloroplast Chlamydomonas geitleri rrnL gene, exon 2 Length = 957 Score = 303 bits (153), Expect = 3e-79 Identities = 255/289 (88%) Strand = Plus / Plus Query: 200 gacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcgt 259 |||||| |||||| | |||||| | ||||||| | |||||| ||| ||||||||||||| Sbjct: 295 gacagtttcaggtgggcagtttatctggggcggatgcctcctaaagcgtaacggaggcgt 354 Query: 260 gcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaagggagct 319 ||||||||| ||| | | |||||| || | | | ||||||||||||| ||| ||||| Sbjct: 355 gcaaaggttctctcagtctggacggaaatcagacattgagtgcaaaggcaaaagagagct 414 Query: 320 tgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacggtgc 379 |||||| ||||| || ||||||||| | |||||| ||||||||||||||||||||||| Sbjct: 415 tgactgtaagaccaacaagtcgagcaggggcgaaagccggccttagtgatccgacggtgc 474 Query: 380 cgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatctt 439 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 475 cgtgtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatctt 534 Query: 440 ccccaagagtccacatcgacgggaaggtttggcacctcgatgtcggctc 488 |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 535 ccccaagagttcacatcgacgggaaggtttggcacctcgatgtcggctc 583 Score = 123 bits (62), Expect = 6e-25 Identities = 136/163 (83%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||| Sbjct: 97 gtgaagatgcggactacctacacctggacagaaagaccctatgaagcttgactgtatcct 156 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 || ||||| || |||| |||| |||||||| ||||||| |||| | ||||| ||||||| Sbjct: 157 ggaattgggttcgggcttttcttgcgcagcctaggtgggaggctatgaaggttcccttcc 216 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagct 163 ||||||||| ||||| ||||||||||||||||| Sbjct: 217 gggggaatttgagccatcattgagagaccactctggaagagct 259
>emb|X68889.1|CHCSRRNL1 Chloroplast Chlamydomonas starrii rrnL gene, exon 1 Length = 2749 Score = 303 bits (153), Expect = 3e-79 Identities = 246/277 (88%) Strand = Plus / Plus Query: 200 gacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcgt 259 |||||| |||||| | |||||| | ||||||| | ||||| ||||||||||||||| || Sbjct: 2473 gacagtttcaggtgggcagtttatttggggcgaatacctcctaaaaggtaacggaggtgt 2532 Query: 260 gcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaagggagct 319 ||||||||| |||| | | |||||| || | | | ||||| ||||||| ||||||||| Sbjct: 2533 gcaaaggttccctcagtctggacggaaatcagacattgagtgtaaaggcaaaagggagct 2592 Query: 320 tgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacggtgc 379 |||||||||||| || ||||||||| | |||||| ||||||||||||||||||||||| Sbjct: 2593 tgactgcaagacctacaagtcgagcaggggcgaaagccggccttagtgatccgacggtgc 2652 Query: 380 cgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatctt 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2653 cgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatctt 2712 Query: 440 ccccaagagtccacatcgacgggaaggtttggcacct 476 |||||||||| |||||||||||||||||||||||||| Sbjct: 2713 ccccaagagttcacatcgacgggaaggtttggcacct 2749 Score = 111 bits (56), Expect = 2e-21 Identities = 92/104 (88%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| | | Sbjct: 2275 gtgaagatgcggactacctacacctggacagaaagaccctatgaagcttgactgtatctt 2334 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcg 104 || ||||| || |||| |||| |||||||| ||||||| ||||| Sbjct: 2335 ggaattgggttcgggcttttcttgcgcagcctaggtgggaggcg 2378 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 131 gagccatcagtgagataccactctggaagagctcggattctaa 173 ||||||||||||||| ||||||||||||||||| | ||||||| Sbjct: 2405 gagccatcagtgagagaccactctggaagagctagaattctaa 2447
>emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA gene Length = 4870 Score = 303 bits (153), Expect = 3e-79 Identities = 261/297 (87%) Strand = Plus / Plus Query: 192 ggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaac 251 |||||||| ||||| |||||| | |||||| ||||||| |||||| |||| ||||| Sbjct: 3943 ggccaaggaacagtttcaggtgggcagtttgactggggcggtcgcctcctaaaaagtaac 4002 Query: 252 ggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaaggcaga 311 ||||||||||||||||| |||| ||| | ||| || ||| | ||||| ||||||| | Sbjct: 4003 ggaggcgtgcaaaggttccctcaggctggttggaaatcagtcgtagagtgtaaaggcata 4062 Query: 312 agggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatcc 371 |||||||||||||||||||| || |||||||||||||||||||||||||||||||||| Sbjct: 4063 agggagcttgactgcaagacctacaagtcgagcagagacgaaagtcggccttagtgatcc 4122 Query: 372 gacggtgccgagtggaagggccgtcgctcaacggataaaagttactctagggataacagg 431 ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 4123 gacagtgccgagtggaaggcgtgtcgctcaacggataaaagttactctagggataacagg 4182 Query: 432 ctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgatgtcggctc 488 ||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||| Sbjct: 4183 ctgatctcccccaagagttcacatcgacggggaggtttggcacctcgatgtcggctc 4239 Score = 111 bits (56), Expect = 2e-21 Identities = 80/88 (90%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct: 3752 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgtaactt 3811 Query: 61 gggattggctttgggcctttcctgcgca 88 || ||||| |||| || |||| |||||| Sbjct: 3812 ggaattgggtttgagcttttcttgcgca 3839 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 131 gagccatcagtgagataccactctggaagagctcggattctaaccttg 178 |||| ||||||||||||||||||||||| |||| | |||||||||||| Sbjct: 3882 gagctatcagtgagataccactctggaaaagctagaattctaaccttg 3929
>emb|X01977.1|CHCRN23S Chlamydomonas reinhardtii chloroplast 23S rRNA gene intron Length = 1623 Score = 303 bits (153), Expect = 3e-79 Identities = 256/289 (88%), Gaps = 1/289 (0%) Strand = Plus / Plus Query: 200 gacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcgt 259 |||||| |||||| | |||||| | ||||||| | |||||| |||||||||||||||||| Sbjct: 21 gacagtttcaggtgggcagtttatttggggcgaatgcctcctaaaaggtaacggaggcgt 80 Query: 260 gcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaagggagct 319 ||||||||| |||| | | |||||| || | | | ||||| ||||||| ||||||||| Sbjct: 81 gcaaaggttccctcagtctggacggaaatcagacattgagtgtaaaggcaaaagggagct 140 Query: 320 tgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacggtgc 379 |||||||||||| || ||||||||| | |||||| |||||||||||||||||||||| Sbjct: 141 tgactgcaagacctacaagtcgagcaggggcgaaaga-ggccttagtgatccgacggtgc 199 Query: 380 cgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatctt 439 || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 200 cgcgtggaagggccgtcgctcaacggataaaagttactcccgggataacaggctgatctt 259 Query: 440 ccccaagagtccacatcgacgggaaggtttggcacctcgatgtcggctc 488 |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 260 ccccaagagttcacatcgacgggaaggtttggcacctcgatgtcggctc 308
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 299 bits (151), Expect = 4e-78 Identities = 181/191 (94%) Strand = Plus / Plus Query: 298 agtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtc 357 |||||||||||| |||||||||||||||||||| ||| | |||||||| |||||||||| Sbjct: 1925 agtgcaaaggcataagggagcttgactgcaagagccacacctcgagcagggacgaaagtc 1984 Query: 358 ggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttact 417 ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| Sbjct: 1985 ggccttagtgatccgacggcgctgagtggaagggccgtcgctcaacggataaaagttact 2044 Query: 418 ctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctc 477 ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 2045 ctagggataacaggctgatctcccccaagagtccacatcgacggggaggtttggcacctc 2104 Query: 478 gatgtcggctc 488 ||||||||||| Sbjct: 2105 gatgtcggctc 2115 Score = 95.6 bits (48), Expect = 1e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||| Sbjct: 1629 gtgaagatacggactacctgcacttggacagaaagaccctatgaagctttactgtagcct 1688 Query: 61 gggattgg 68 || ||||| Sbjct: 1689 ggaattgg 1696 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 235 gcctcccaaaaggtaacggaggcgtgcaaaggtttcctc 273 |||||| ||||||||||||||||| ||||||||| |||| Sbjct: 1861 gcctcctaaaaggtaacggaggcgcgcaaaggttccctc 1899
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 299 bits (151), Expect = 4e-78 Identities = 257/289 (88%), Gaps = 5/289 (1%) Strand = Plus / Plus Query: 203 agtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcgtgca 262 |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 2211 agtctcaggtagacagtttctatggggcgtaggcctcctaaaaagtaacggaggcgtgca 2270 Query: 263 aa-ggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaagggagcttg 321 || |||||| | ||||| | || || || | | ||||||| ||||||||||||||||| Sbjct: 2271 aaaggtttcatggggccgg---gagataggccattgagtgcagaggcagaagggagcttg 2327 Query: 322 actgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacggtgccg 381 | |||||||| |||||||||||||| || ||||| ||||||||||||||| || | ||| Sbjct: 2328 attgcaagacccacccgtcgagcaggaactaaagttggccttagtgatccggcgataccg 2387 Query: 382 agtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatcttcc 441 ||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2388 agtagaagggtcgttgctcaacggataaaagttactctagggataacaggctgatcttcc 2447 Query: 442 ccaagagtccacatcga-cgggaaggtttggcacctcgatgtcggctct 489 ||||||| |||||||| |||||||||||||||| ||||||||||||| Sbjct: 2448 ccaagagctcacatcgatagggaaggtttggcaccacgatgtcggctct 2496 Score = 135 bits (68), Expect = 2e-28 Identities = 102/112 (91%), Gaps = 1/112 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttt-actgttccc 59 ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| Sbjct: 2029 gtgaagatgcggactactcacacctggacagaaagaccctatgaagctttcactgttctt 2088 Query: 60 tgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaagg 111 |||||||| ||| ||||||||||||||||| |||| |||||||||||||||| Sbjct: 2089 tgggattgacttggggcctttcctgcgcagtttagatggaaggcgaagaagg 2140 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Plus Query: 131 gagccatcagtgagataccactctggaa 158 ||||||| |||||||||||||||||||| Sbjct: 2156 gagccataagtgagataccactctggaa 2183
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 299 bits (151), Expect = 4e-78 Identities = 223/247 (90%) Strand = Plus / Plus Query: 242 aaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagtg 301 |||||||||| |||| ||||||||||| |||| | | |||||| || | | | ||||| Sbjct: 4486 aaaaggtaactgaggtgtgcaaaggttccctcagtctggacggaaatcagacattgagtg 4545 Query: 302 caaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggcc 361 ||||||| ||||||||||||||||||||| || ||||||||| | |||||| ||||| Sbjct: 4546 taaaggcaaaagggagcttgactgcaagacctacaagtcgagcaggggcgaaagccggcc 4605 Query: 362 ttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactctag 421 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 4606 ttagtgatccgacggtgccgtgtggaagggccgtcgctcaacggataaaagttactctag 4665 Query: 422 ggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgatg 481 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 4666 ggataacaggctgatcttccccaagagttcacatcgacgggaaggtttggcacctcgatg 4725 Query: 482 tcggctc 488 ||||||| Sbjct: 4726 tcggctc 4732 Score = 115 bits (58), Expect = 1e-22 Identities = 97/110 (88%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| | | Sbjct: 4247 gtgaagatgcggactacctacacctggacagaaagaccctatgaagcttgactgtatctt 4306 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaag 110 || ||||| || |||| |||| |||||||| ||||||| |||||| |||| Sbjct: 4307 ggaattgggttcgggcttttcttgcgcagcctaggtgggaggcgatgaag 4356 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 131 gagccatcagtgagataccactctggaagagct 163 ||||||||||||||| ||||||||||||||||| Sbjct: 4377 gagccatcagtgagagaccactctggaagagct 4409
>emb|X68929.1|CHCKRRNL3 Chloroplast Chlamydomonas komma rrnL gene, exon 3 Length = 955 Score = 299 bits (151), Expect = 4e-78 Identities = 223/247 (90%) Strand = Plus / Plus Query: 242 aaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagtg 301 |||||||||| |||| ||||||||||| |||| | | |||||| || | | | ||||| Sbjct: 336 aaaaggtaactgaggtgtgcaaaggttccctcagtctggacggaaatcagacattgagtg 395 Query: 302 caaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggcc 361 ||||||| ||||||||||||||||||||| || ||||||||| | |||||| ||||| Sbjct: 396 taaaggcaaaagggagcttgactgcaagacctacaagtcgagcaggggcgaaagccggcc 455 Query: 362 ttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactctag 421 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 456 ttagtgatccgacggtgccgtgtggaagggccgtcgctcaacggataaaagttactctag 515 Query: 422 ggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgatg 481 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 516 ggataacaggctgatcttccccaagagttcacatcgacgggaaggtttggcacctcgatg 575 Query: 482 tcggctc 488 ||||||| Sbjct: 576 tcggctc 582 Score = 115 bits (58), Expect = 1e-22 Identities = 97/110 (88%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| | | Sbjct: 97 gtgaagatgcggactacctacacctggacagaaagaccctatgaagcttgactgtatctt 156 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaag 110 || ||||| || |||| |||| |||||||| ||||||| |||||| |||| Sbjct: 157 ggaattgggttcgggcttttcttgcgcagcctaggtgggaggcgatgaag 206 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 131 gagccatcagtgagataccactctggaagagct 163 ||||||||||||||| ||||||||||||||||| Sbjct: 227 gagccatcagtgagagaccactctggaagagct 259
>emb|BX572100.1| Prochlorococcus marinus MIT9313 complete genome; segment 6/7 Length = 348071 Score = 297 bits (150), Expect = 2e-77 Identities = 228/254 (89%) Strand = Plus / Minus Query: 235 gcctcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcc 294 |||||| ||||||||||||||||| ||||||||| |||| ||| | ||| || ||| Sbjct: 4378 gcctcctaaaaggtaacggaggcgcgcaaaggttccctcaggctggttggaaatcagtcg 4319 Query: 295 tcgagtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaa 354 |||||||||||||||||||||||||||||| |||| || ||||| ||| ||||||| Sbjct: 4318 acgagtgcaaaggcagaagggagcttgactgtgagacctacaagtcgaacagggacgaaa 4259 Query: 355 gtcggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagtt 414 ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct: 4258 gtcggccttagtgatccgacggttctgagtggaagggccgtcgctcaacggataaaagtt 4199 Query: 415 actctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcac 474 |||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||| Sbjct: 4198 actctagggataacaggctgatctcccccaagagttcacatcgacggggaggtttggcac 4139 Query: 475 ctcgatgtcggctc 488 |||||||||||||| Sbjct: 4138 ctcgatgtcggctc 4125 Score = 85.7 bits (43), Expect = 1e-13 Identities = 52/55 (94%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgt 55 ||||||||||||||||| | |||| |||||||||||||||||||||||||||||| Sbjct: 4610 gtgaagatgcggactacgtacacccggacagaaagaccctatgaagctttactgt 4556
>emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome; segment 1/7 Length = 349391 Score = 297 bits (150), Expect = 2e-77 Identities = 228/254 (89%) Strand = Plus / Plus Query: 235 gcctcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcc 294 |||||| ||||||||||||||||| ||||||||| |||| ||| | ||| || ||| Sbjct: 213394 gcctcctaaaaggtaacggaggcgcgcaaaggttccctcaggctggttggaaatcagtcg 213453 Query: 295 tcgagtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaa 354 |||||||||||||||||||||||||||||| |||| || ||||| ||| ||||||| Sbjct: 213454 acgagtgcaaaggcagaagggagcttgactgtgagacctacaagtcgaacagggacgaaa 213513 Query: 355 gtcggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagtt 414 ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct: 213514 gtcggccttagtgatccgacggttctgagtggaagggccgtcgctcaacggataaaagtt 213573 Query: 415 actctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcac 474 |||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||| Sbjct: 213574 actctagggataacaggctgatctcccccaagagttcacatcgacggggaggtttggcac 213633 Query: 475 ctcgatgtcggctc 488 |||||||||||||| Sbjct: 213634 ctcgatgtcggctc 213647 Score = 85.7 bits (43), Expect = 1e-13 Identities = 52/55 (94%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgt 55 ||||||||||||||||| | |||| |||||||||||||||||||||||||||||| Sbjct: 213162 gtgaagatgcggactacgtacacccggacagaaagaccctatgaagctttactgt 213216
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 297 bits (150), Expect = 2e-77 Identities = 228/254 (89%) Strand = Plus / Plus Query: 235 gcctcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcc 294 |||||| ||||||||||||||||| ||||||| |||| ||| |||||| || ||| Sbjct: 2206 gcctcctaaaaggtaacggaggcgcacaaaggtcccctcaggctggacggaaatcagtcg 2265 Query: 295 tcgagtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaa 354 | ||||| ||||||||||||||||||||||||||||| || ||||||||| ||||||| Sbjct: 2266 tagagtgtaaaggcagaagggagcttgactgcaagacctacaagtcgagcagggacgaaa 2325 Query: 355 gtcggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagtt 414 ||||| ||||||||||||||||||| | |||||| ||||||||||||||||||||||||| Sbjct: 2326 gtcggtcttagtgatccgacggtgctgtgtggaaaggccgtcgctcaacggataaaagtt 2385 Query: 415 actctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcac 474 |||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||| Sbjct: 2386 actctagggataacaggctgatctcccccaagagttcacatcgacggggaggtttggcac 2445 Query: 475 ctcgatgtcggctc 488 |||||||||||||| Sbjct: 2446 ctcgatgtcggctc 2459 Score = 143 bits (72), Expect = 6e-31 Identities = 96/104 (92%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1973 gtgaagatgcggactccctgcacctggacagaaagaccctatgaagctttactgtaccct 2032 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcg 104 | ||||||||||||| || |||||||||||||||||||||| Sbjct: 2033 gcaattggctttgggctcctcttgcgcagcttaggtggaaggcg 2076 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 131 gagccatcagtgagataccactctggaagagct 163 |||||| |||||||||||||||||||| ||||| Sbjct: 2103 gagccaacagtgagataccactctggaggagct 2135
>emb|AM084274.1| Glaucocystis nostochinearum cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 45.88 Length = 3065 Score = 297 bits (150), Expect = 2e-77 Identities = 228/254 (89%) Strand = Plus / Plus Query: 235 gcctcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcc 294 |||||| |||| |||||||||||| ||||||||| |||| ||| ||| || || | | Sbjct: 2744 gcctcctaaaaagtaacggaggcgcgcaaaggttccctcaggctggacagaaatcagcct 2803 Query: 295 tcgagtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaa 354 | ||||| ||||||||||||||||||||||| ||||| ||| ||||| ||| |||||| Sbjct: 2804 tagagtgtaaaggcagaagggagcttgactgtaagacccacaagtcgaacaggaacgaaa 2863 Query: 355 gtcggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagtt 414 || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 2864 gttggccttagtgatccgacggtaccgagtggaagggccgtcgctcaacggataaaagtt 2923 Query: 415 actctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcac 474 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 2924 actctagggataacaggctgatctcccccaagagtccacatcgacggggaggtttggcac 2983 Query: 475 ctcgatgtcggctc 488 |||||||||||||| Sbjct: 2984 ctcgatgtcggctc 2997 Score = 105 bits (53), Expect = 1e-19 Identities = 95/109 (87%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| Sbjct: 2512 gtgaagatgcggactacctgcaccaggacagaaagaccctatgaagctttactgtagcct 2571 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaa 109 | ||||| || |||| ||| ||||||| ||||||| |||| ||||| Sbjct: 2572 gatattgggttcgggctcttcttgcgcagtataggtgggaggctaagaa 2620 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 131 gagccatcagtgagataccactctggaagagctcggattctaac 174 |||||| |||||||||||||||||||||||||| | |||||||| Sbjct: 2642 gagccaacagtgagataccactctggaagagctagaattctaac 2685
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 295 bits (149), Expect = 7e-77 Identities = 260/294 (88%), Gaps = 6/294 (2%) Strand = Plus / Plus Query: 199 ggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcg 258 ||||||||| |||||||||||||||||||||||||||||||| |||| | ||||||||| Sbjct: 2157 ggacagtcttaggtagacagtttctatggggcgtaggcctcctaaaaagcaacggaggca 2216 Query: 259 tgcaaa--ggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaaggga 316 |||||| |||||||| ||||||| || || || | | ||||||||||||| |||||| Sbjct: 2217 tgcaaaaaggtttcctggggccaggcg---ataggccattgagtgcaaaggcataaggga 2273 Query: 317 gcttgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacgg 376 |||||| ||||||||||| ||||||||||| ||| ||||| ||||||||||||||| || Sbjct: 2274 gcttgattgcaagactcatccgtcgagcagggactaaagttggccttagtgatccggcga 2333 Query: 377 tgccgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgat 436 | | |||||| |||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2334 tactgagtgggagggtcgttgctcaacggataaaagttactctagggataacaggctgat 2393 Query: 437 cttccccaagagtccacatcgac-gggaaggtttggcacctcgatgtcggctct 489 |||||||||||| |||| |||| ||||||||||||||||||||||||| |||| Sbjct: 2394 cttccccaagagctcacaccgacagggaaggtttggcacctcgatgtcgactct 2447 Score = 103 bits (52), Expect = 5e-19 Identities = 98/112 (87%), Gaps = 1/112 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttt-actgttccc 59 |||||||||| |||||| |||||||||| ||||||||||||||||||| ||||||||| Sbjct: 1978 gtgaagatgcagactactcacacctggacaaaaagaccctatgaagcttttactgttccc 2037 Query: 60 tgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaagg 111 |||||||| ||| ||||||||||||| ||| ||| || |||| |||||||| Sbjct: 2038 tgggattgacttggggcctttcctgcacagtttaaatgcaaggagaagaagg 2089 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 agtgagataccactctggaa 158 |||||||||||||||||||| Sbjct: 2105 agtgagataccactctggaa 2124
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 295 bits (149), Expect = 7e-77 Identities = 260/294 (88%), Gaps = 6/294 (2%) Strand = Plus / Plus Query: 199 ggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcg 258 ||||||||| |||||||||||||||||||||||||||||||| |||| | ||||||||| Sbjct: 2158 ggacagtcttaggtagacagtttctatggggcgtaggcctcctaaaaagcaacggaggca 2217 Query: 259 tgc--aaaggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaaggga 316 ||| ||||||||||| ||||||| || || || | | ||||||||||||| |||||| Sbjct: 2218 tgcgaaaaggtttcctggggccaggcg---ataggccattgagtgcaaaggcataaggga 2274 Query: 317 gcttgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacgg 376 |||||| ||||||||||| ||||||||||| ||| ||||| ||||||||||||||| || Sbjct: 2275 gcttgattgcaagactcatccgtcgagcagggactaaagttggccttagtgatccggcga 2334 Query: 377 tgccgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgat 436 | | |||||| |||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2335 tactgagtgggagggtcgttgctcaacggataaaagttactctagggataacaggctgat 2394 Query: 437 cttccccaagagtccacatcgac-gggaaggtttggcacctcgatgtcggctct 489 |||||||||||| |||| |||| ||||||||||||||||||||||||| |||| Sbjct: 2395 cttccccaagagctcacaccgacagggaaggtttggcacctcgatgtcgactct 2448 Score = 103 bits (52), Expect = 5e-19 Identities = 98/112 (87%), Gaps = 1/112 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttt-actgttccc 59 |||||||||| |||||| |||||||||| ||||||||||||||||||| ||||||||| Sbjct: 1979 gtgaagatgcagactactcacacctggacaaaaagaccctatgaagcttttactgttccc 2038 Query: 60 tgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaagg 111 |||||||| ||| ||||||||||||| ||| ||| || |||| |||||||| Sbjct: 2039 tgggattgacttggggcctttcctgcacagtttaaatgcaaggagaagaagg 2090 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 agtgagataccactctggaa 158 |||||||||||||||||||| Sbjct: 2106 agtgagataccactctggaa 2125
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 295 bits (149), Expect = 7e-77 Identities = 260/294 (88%), Gaps = 6/294 (2%) Strand = Plus / Plus Query: 199 ggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcg 258 ||||||||| |||||||||||||||||||||||||||||||| |||| | ||||||||| Sbjct: 2158 ggacagtcttaggtagacagtttctatggggcgtaggcctcctaaaaagcaacggaggca 2217 Query: 259 tgcaaa--ggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaaggga 316 |||||| |||||||| ||||||| || || || | | ||||||||||||| |||||| Sbjct: 2218 tgcaaaaaggtttcctggggccaggcg---ataggccattgagtgcaaaggcataaggga 2274 Query: 317 gcttgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacgg 376 |||||| ||||||||||| ||||||||||| ||| ||||| ||||||||||||||| || Sbjct: 2275 gcttgattgcaagactcatccgtcgagcagggactaaagttggccttagtgatccggcga 2334 Query: 377 tgccgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgat 436 | | |||||| |||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2335 tactgagtgggagggtcgttgctcaacggataaaagttactctagggataacaggctgat 2394 Query: 437 cttccccaagagtccacatcgac-gggaaggtttggcacctcgatgtcggctct 489 |||||||||||| |||| |||| ||||||||||||||||||||||||| |||| Sbjct: 2395 cttccccaagagctcacaccgacagggaaggtttggcacctcgatgtcgactct 2448 Score = 103 bits (52), Expect = 5e-19 Identities = 98/112 (87%), Gaps = 1/112 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttt-actgttccc 59 |||||||||| |||||| |||||||||| ||||||||||||||||||| ||||||||| Sbjct: 1979 gtgaagatgcagactactcacacctggacaaaaagaccctatgaagcttttactgttccc 2038 Query: 60 tgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaagg 111 |||||||| ||| ||||||||||||| ||| ||| || |||| |||||||| Sbjct: 2039 tgggattgacttggggcctttcctgcacagtttaaatgcaaggagaagaagg 2090 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 agtgagataccactctggaa 158 |||||||||||||||||||| Sbjct: 2106 agtgagataccactctggaa 2125
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 295 bits (149), Expect = 7e-77 Identities = 260/294 (88%), Gaps = 6/294 (2%) Strand = Plus / Plus Query: 199 ggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcg 258 ||||||||| |||||||||||||||||||||||||||||||| |||| | ||||||||| Sbjct: 2158 ggacagtcttaggtagacagtttctatggggcgtaggcctcctaaaaagcaacggaggca 2217 Query: 259 tgcaaa--ggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaaggga 316 |||||| |||||||| ||||||| || || || | | ||||||||||||| |||||| Sbjct: 2218 tgcaaaaaggtttcctggggccaggcg---ataggccattgagtgcaaaggcataaggga 2274 Query: 317 gcttgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacgg 376 |||||| ||||||||||| ||||||||||| ||| ||||| ||||||||||||||| || Sbjct: 2275 gcttgattgcaagactcatccgtcgagcagggactaaagttggccttagtgatccggcga 2334 Query: 377 tgccgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgat 436 | | |||||| |||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2335 tactgagtgggagggtcgttgctcaacggataaaagttactctagggataacaggctgat 2394 Query: 437 cttccccaagagtccacatcgac-gggaaggtttggcacctcgatgtcggctct 489 |||||||||||| |||| |||| ||||||||||||||||||||||||| |||| Sbjct: 2395 cttccccaagagctcacaccgacagggaaggtttggcacctcgatgtcgactct 2448 Score = 103 bits (52), Expect = 5e-19 Identities = 98/112 (87%), Gaps = 1/112 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttt-actgttccc 59 |||||||||| |||||| |||||||||| ||||||||||||||||||| ||||||||| Sbjct: 1979 gtgaagatgcagactactcacacctggacaaaaagaccctatgaagcttttactgttccc 2038 Query: 60 tgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaagg 111 |||||||| ||| ||||||||||||| ||| ||| || |||| |||||||| Sbjct: 2039 tgggattgacttggggcctttcctgcacagtttaaatgcaaggagaagaagg 2090 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 agtgagataccactctggaa 158 |||||||||||||||||||| Sbjct: 2106 agtgagataccactctggaa 2125
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 295 bits (149), Expect = 7e-77 Identities = 260/294 (88%), Gaps = 6/294 (2%) Strand = Plus / Plus Query: 199 ggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcg 258 ||||||||| |||||||||||||||||||||||||||||||| |||| | ||||||||| Sbjct: 2158 ggacagtcttaggtagacagtttctatggggcgtaggcctcctaaaaagcaacggaggca 2217 Query: 259 tgcaaa--ggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaaggga 316 |||||| |||||||| ||||||| || || || | | ||||||||||||| |||||| Sbjct: 2218 tgcaaaaaggtttcctggggccaggcg---ataggccattgagtgcaaaggcataaggga 2274 Query: 317 gcttgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacgg 376 |||||| ||||||||||| ||||||||||| ||| ||||| ||||||||||||||| || Sbjct: 2275 gcttgattgcaagactcatccgtcgagcagggactaaagttggccttagtgatccggcga 2334 Query: 377 tgccgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgat 436 | | |||||| |||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2335 tactgagtgggagggtcgttgctcaacggataaaagttactctagggataacaggctgat 2394 Query: 437 cttccccaagagtccacatcgac-gggaaggtttggcacctcgatgtcggctct 489 |||||||||||| |||| |||| ||||||||||||||||||||||||| |||| Sbjct: 2395 cttccccaagagctcacaccgacagggaaggtttggcacctcgatgtcgactct 2448 Score = 103 bits (52), Expect = 5e-19 Identities = 98/112 (87%), Gaps = 1/112 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttt-actgttccc 59 |||||||||| |||||| |||||||||| ||||||||||||||||||| ||||||||| Sbjct: 1979 gtgaagatgcagactactcacacctggacaaaaagaccctatgaagcttttactgttccc 2038 Query: 60 tgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaagg 111 |||||||| ||| ||||||||||||| ||| ||| || |||| |||||||| Sbjct: 2039 tgggattgacttggggcctttcctgcacagtttaaatgcaaggagaagaagg 2090 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 agtgagataccactctggaa 158 |||||||||||||||||||| Sbjct: 2106 agtgagataccactctggaa 2125
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 295 bits (149), Expect = 7e-77 Identities = 260/294 (88%), Gaps = 6/294 (2%) Strand = Plus / Plus Query: 199 ggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcg 258 ||||||||| |||||||||||||||||||||||||||||||| |||| | ||||||||| Sbjct: 2157 ggacagtcttaggtagacagtttctatggggcgtaggcctcctaaaaagcaacggaggca 2216 Query: 259 tgcaaa--ggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaaggga 316 |||||| |||||||| ||||||| || || || | | ||||||||||||| |||||| Sbjct: 2217 tgcaaaaaggtttcctggggccaggcg---ataggccattgagtgcaaaggcataaggga 2273 Query: 317 gcttgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacgg 376 |||||| ||||||||||| ||||||||||| ||| ||||| ||||||||||||||| || Sbjct: 2274 gcttgattgcaagactcatccgtcgagcagggactaaagttggccttagtgatccggcga 2333 Query: 377 tgccgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgat 436 | | |||||| |||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2334 tactgagtgggagggtcgttgctcaacggataaaagttactctagggataacaggctgat 2393 Query: 437 cttccccaagagtccacatcgac-gggaaggtttggcacctcgatgtcggctct 489 |||||||||||| |||| |||| ||||||||||||||||||||||||| |||| Sbjct: 2394 cttccccaagagctcacaccgacagggaaggtttggcacctcgatgtcgactct 2447 Score = 103 bits (52), Expect = 5e-19 Identities = 98/112 (87%), Gaps = 1/112 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttt-actgttccc 59 |||||||||| |||||| |||||||||| ||||||||||||||||||| ||||||||| Sbjct: 1978 gtgaagatgcagactactcacacctggacaaaaagaccctatgaagcttttactgttccc 2037 Query: 60 tgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaagg 111 |||||||| ||| ||||||||||||| ||| ||| || |||| |||||||| Sbjct: 2038 tgggattgacttggggcctttcctgcacagtttaaatgcaaggagaagaagg 2089 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 agtgagataccactctggaa 158 |||||||||||||||||||| Sbjct: 2105 agtgagataccactctggaa 2124
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 295 bits (149), Expect = 7e-77 Identities = 260/294 (88%), Gaps = 6/294 (2%) Strand = Plus / Plus Query: 199 ggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcg 258 ||||||||| |||||||||||||||||||||||||||||||| |||| | ||||||||| Sbjct: 2158 ggacagtcttaggtagacagtttctatggggcgtaggcctcctaaaaagcaacggaggca 2217 Query: 259 tgcaaa--ggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaaggga 316 |||||| |||||||| ||||||| || || || | | ||||||||||||| |||||| Sbjct: 2218 tgcaaaaaggtttcctggggccaggcg---ataggccattgagtgcaaaggcataaggga 2274 Query: 317 gcttgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacgg 376 |||||| ||||||||||| ||||||||||| ||| ||||| ||||||||||||||| || Sbjct: 2275 gcttgattgcaagactcatccgtcgagcagggactaaagttggccttagtgatccggcga 2334 Query: 377 tgccgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgat 436 | | |||||| |||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2335 tactgagtgggagggtcgttgctcaacggataaaagttactctagggataacaggctgat 2394 Query: 437 cttccccaagagtccacatcgac-gggaaggtttggcacctcgatgtcggctct 489 |||||||||||| |||| |||| ||||||||||||||||||||||||| |||| Sbjct: 2395 cttccccaagagctcacaccgacagggaaggtttggcacctcgatgtcgactct 2448 Score = 103 bits (52), Expect = 5e-19 Identities = 98/112 (87%), Gaps = 1/112 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttt-actgttccc 59 |||||||||| |||||| |||||||||| ||||||||||||||||||| ||||||||| Sbjct: 1979 gtgaagatgcagactactcacacctggacaaaaagaccctatgaagcttttactgttccc 2038 Query: 60 tgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaagg 111 |||||||| ||| ||||||||||||| ||| ||| || |||| |||||||| Sbjct: 2039 tgggattgacttggggcctttcctgcacagtttaaatgcaaggagaagaagg 2090 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 agtgagataccactctggaa 158 |||||||||||||||||||| Sbjct: 2106 agtgagataccactctggaa 2125
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 295 bits (149), Expect = 7e-77 Identities = 260/294 (88%), Gaps = 6/294 (2%) Strand = Plus / Plus Query: 199 ggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcg 258 ||||||||| |||||||||||||||||||||||||||||||| |||| | ||||||||| Sbjct: 2158 ggacagtcttaggtagacagtttctatggggcgtaggcctcctaaaaagcaacggaggca 2217 Query: 259 tgcaaa--ggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaaggga 316 |||||| |||||||| ||||||| || || || | | ||||||||||||| |||||| Sbjct: 2218 tgcaaaaaggtttcctggggccaggcg---ataggccattgagtgcaaaggcataaggga 2274 Query: 317 gcttgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacgg 376 |||||| ||||||||||| ||||||||||| ||| ||||| ||||||||||||||| || Sbjct: 2275 gcttgattgcaagactcatccgtcgagcagggactaaagttggccttagtgatccggcga 2334 Query: 377 tgccgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgat 436 | | |||||| |||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2335 tactgagtgggagggtcgttgctcaacggataaaagttactctagggataacaggctgat 2394 Query: 437 cttccccaagagtccacatcgac-gggaaggtttggcacctcgatgtcggctct 489 |||||||||||| |||| |||| ||||||||||||||||||||||||| |||| Sbjct: 2395 cttccccaagagctcacaccgacagggaaggtttggcacctcgatgtcgactct 2448 Score = 95.6 bits (48), Expect = 1e-16 Identities = 97/112 (86%), Gaps = 1/112 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagc-tttactgttccc 59 |||||||||| |||||| |||||||||| |||||||||||||||| |||||||||||| Sbjct: 1979 gtgaagatgcagactactcacacctggacaaaaagaccctatgaagcttttactgttccc 2038 Query: 60 tgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaagg 111 ||||||| ||| ||||||||||||| ||| ||| || |||| |||||||| Sbjct: 2039 cgggattgacttggggcctttcctgcacagtttaaatgcaaggagaagaagg 2090 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 agtgagataccactctggaa 158 |||||||||||||||||||| Sbjct: 2106 agtgagataccactctggaa 2125
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 295 bits (149), Expect = 7e-77 Identities = 260/294 (88%), Gaps = 6/294 (2%) Strand = Plus / Plus Query: 199 ggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcg 258 ||||||||| |||||||||||||||||||||||||||||||| |||| | ||||||||| Sbjct: 2158 ggacagtcttaggtagacagtttctatggggcgtaggcctcctaaaaagcaacggaggca 2217 Query: 259 tgcaaa--ggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaaggga 316 |||||| |||||||| ||||||| || || || | | ||||||||||||| |||||| Sbjct: 2218 tgcaaaaaggtttcctggggccaggcg---ataggccattgagtgcaaaggcataaggga 2274 Query: 317 gcttgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacgg 376 |||||| ||||||||||| ||||||||||| ||| ||||| ||||||||||||||| || Sbjct: 2275 gcttgattgcaagactcatccgtcgagcagggactaaagttggccttagtgatccggcga 2334 Query: 377 tgccgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgat 436 | | |||||| |||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2335 tactgagtgggagggtcgttgctcaacggataaaagttactctagggataacaggctgat 2394 Query: 437 cttccccaagagtccacatcgac-gggaaggtttggcacctcgatgtcggctct 489 |||||||||||| |||| |||| ||||||||||||||||||||||||| |||| Sbjct: 2395 cttccccaagagctcacaccgacagggaaggtttggcacctcgatgtcgactct 2448 Score = 103 bits (52), Expect = 5e-19 Identities = 98/112 (87%), Gaps = 1/112 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttt-actgttccc 59 |||||||||| |||||| |||||||||| ||||||||||||||||||| ||||||||| Sbjct: 1979 gtgaagatgcagactactcacacctggacaaaaagaccctatgaagcttttactgttccc 2038 Query: 60 tgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaagg 111 |||||||| ||| ||||||||||||| ||| ||| || |||| |||||||| Sbjct: 2039 tgggattgacttggggcctttcctgcacagtttaaatgcaaggagaagaagg 2090
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 295 bits (149), Expect = 7e-77 Identities = 260/294 (88%), Gaps = 6/294 (2%) Strand = Plus / Plus Query: 199 ggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcg 258 ||||||||| |||||||||||||||||||||||||||||||| |||| | ||||||||| Sbjct: 2157 ggacagtcttaggtagacagtttctatggggcgtaggcctcctaaaaagcaacggaggca 2216 Query: 259 tgcaaa--ggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaaggga 316 |||||| |||||||| ||||||| || || || | | ||||||||||||| |||||| Sbjct: 2217 tgcaaaaaggtttcctggggccaggcg---ataggccattgagtgcaaaggcataaggga 2273 Query: 317 gcttgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacgg 376 |||||| ||||||||||| ||||||||||| ||| ||||| ||||||||||||||| || Sbjct: 2274 gcttgattgcaagactcatccgtcgagcagggactaaagttggccttagtgatccggcga 2333 Query: 377 tgccgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgat 436 | | |||||| |||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2334 tactgagtgggagggtcgttgctcaacggataaaagttactctagggataacaggctgat 2393 Query: 437 cttccccaagagtccacatcgac-gggaaggtttggcacctcgatgtcggctct 489 |||||||||||| |||| |||| ||||||||||||||||||||||||| |||| Sbjct: 2394 cttccccaagagctcacaccgacagggaaggtttggcacctcgatgtcgactct 2447 Score = 103 bits (52), Expect = 5e-19 Identities = 98/112 (87%), Gaps = 1/112 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttt-actgttccc 59 |||||||||| |||||| |||||||||| ||||||||||||||||||| ||||||||| Sbjct: 1978 gtgaagatgcagactactcacacctggacaaaaagaccctatgaagcttttactgttccc 2037 Query: 60 tgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaagg 111 |||||||| ||| ||||||||||||| ||| ||| || |||| |||||||| Sbjct: 2038 tgggattgacttggggcctttcctgcacagtttaaatgcaaggagaagaagg 2089 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 agtgagataccactctggaa 158 |||||||||||||||||||| Sbjct: 2105 agtgagataccactctggaa 2124
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 295 bits (149), Expect = 7e-77 Identities = 260/294 (88%), Gaps = 6/294 (2%) Strand = Plus / Plus Query: 199 ggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcg 258 ||||||||| |||||||||||||||||||||||||||||||| |||| | ||||||||| Sbjct: 2158 ggacagtcttaggtagacagtttctatggggcgtaggcctcctaaaaagcaacggaggca 2217 Query: 259 tgcaaa--ggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaaggga 316 |||||| |||||||| ||||||| || || || | | ||||||||||||| |||||| Sbjct: 2218 tgcaaaaaggtttcctggggccaggcg---ataggccattgagtgcaaaggcataaggga 2274 Query: 317 gcttgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacgg 376 |||||| ||||||||||| ||||||||||| ||| ||||| ||||||||||||||| || Sbjct: 2275 gcttgattgcaagactcatccgtcgagcagggactaaagttggccttagtgatccggcga 2334 Query: 377 tgccgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgat 436 | | |||||| |||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2335 tactgagtgggagggtcgttgctcaacggataaaagttactctagggataacaggctgat 2394 Query: 437 cttccccaagagtccacatcgac-gggaaggtttggcacctcgatgtcggctct 489 |||||||||||| |||| |||| ||||||||||||||||||||||||| |||| Sbjct: 2395 cttccccaagagctcacaccgacagggaaggtttggcacctcgatgtcgactct 2448 Score = 103 bits (52), Expect = 5e-19 Identities = 98/112 (87%), Gaps = 1/112 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttt-actgttccc 59 |||||||||| |||||| |||||||||| ||||||||||||||||||| ||||||||| Sbjct: 1979 gtgaagatgcagactactcacacctggacaaaaagaccctatgaagcttttactgttccc 2038 Query: 60 tgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaagg 111 |||||||| ||| ||||||||||||| ||| ||| || |||| |||||||| Sbjct: 2039 tgggattgacttggggcctttcctgcacagtttaaatgcaaggagaagaagg 2090 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 agtgagataccactctggaa 158 |||||||||||||||||||| Sbjct: 2106 agtgagataccactctggaa 2125
>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome Length = 191952 Score = 295 bits (149), Expect = 7e-77 Identities = 260/297 (87%) Strand = Plus / Plus Query: 192 ggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaac 251 |||||||| ||||| |||||||| |||||| ||||||| |||||| |||| ||||| Sbjct: 191110 ggccaaggaacagtttcaggtaggcagtttgactggggcggtcgcctcctaaaaagtaac 191169 Query: 252 ggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaaggcaga 311 ||||||||||||||||| ||| ||| | |||| || ||| | ||||| ||||||| | Sbjct: 191170 ggaggcgtgcaaaggttctctcaggctggtcggaaatcagtcgtagagtgtaaaggcata 191229 Query: 312 agggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatcc 371 || ||||||||||| |||| || ||||| |||||||||||||||||||||||||||| Sbjct: 191230 agagagcttgactgtgagacctacaagtcgaacagagacgaaagtcggccttagtgatcc 191289 Query: 372 gacggtgccgagtggaagggccgtcgctcaacggataaaagttactctagggataacagg 431 | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 191290 ggcggtaccgagtggaagggccgtcgctcaacggataaaagttactctagggataacagg 191349 Query: 432 ctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgatgtcggctc 488 ||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||| Sbjct: 191350 ctgatctcccccaagagttcacatcgacggggaggtttggcacctcgatgtcggctc 191406 Score = 295 bits (149), Expect = 7e-77 Identities = 260/297 (87%) Strand = Plus / Plus Query: 192 ggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaac 251 |||||||| ||||| |||||||| |||||| ||||||| |||||| |||| ||||| Sbjct: 152537 ggccaaggaacagtttcaggtaggcagtttgactggggcggtcgcctcctaaaaagtaac 152596 Query: 252 ggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaaggcaga 311 ||||||||||||||||| ||| ||| | |||| || ||| | ||||| ||||||| | Sbjct: 152597 ggaggcgtgcaaaggttctctcaggctggtcggaaatcagtcgtagagtgtaaaggcata 152656 Query: 312 agggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatcc 371 || ||||||||||| |||| || ||||| |||||||||||||||||||||||||||| Sbjct: 152657 agagagcttgactgtgagacctacaagtcgaacagagacgaaagtcggccttagtgatcc 152716 Query: 372 gacggtgccgagtggaagggccgtcgctcaacggataaaagttactctagggataacagg 431 | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 152717 ggcggtaccgagtggaagggccgtcgctcaacggataaaagttactctagggataacagg 152776 Query: 432 ctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgatgtcggctc 488 ||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||| Sbjct: 152777 ctgatctcccccaagagttcacatcgacggggaggtttggcacctcgatgtcggctc 152833 Score = 119 bits (60), Expect = 9e-24 Identities = 96/108 (88%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct: 190919 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgtagctt 190978 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 108 || ||||| || |||| |||| ||||||| ||||||| |||| |||| Sbjct: 190979 ggaattgggttcgggcttttcttgcgcaggataggtgggaggctaaga 191026 Score = 119 bits (60), Expect = 9e-24 Identities = 96/108 (88%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct: 152346 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgtagctt 152405 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 108 || ||||| || |||| |||| ||||||| ||||||| |||| |||| Sbjct: 152406 ggaattgggttcgggcttttcttgcgcaggataggtgggaggctaaga 152453 Score = 48.1 bits (24), Expect = 0.027 Identities = 36/40 (90%) Strand = Plus / Plus Query: 139 agtgagataccactctggaagagctcggattctaaccttg 178 |||||||||||||||||||| |||| |||||||||||| Sbjct: 191057 agtgagataccactctggaaaagctaaaattctaaccttg 191096 Score = 48.1 bits (24), Expect = 0.027 Identities = 36/40 (90%) Strand = Plus / Plus Query: 139 agtgagataccactctggaagagctcggattctaaccttg 178 |||||||||||||||||||| |||| |||||||||||| Sbjct: 152484 agtgagataccactctggaaaagctaaaattctaaccttg 152523
>gb|L42858.1|CRECPRGOLA Chlamydomonas gigantea large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2888 Score = 293 bits (148), Expect = 3e-76 Identities = 226/252 (89%) Strand = Plus / Plus Query: 237 ctcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctc 296 |||| |||||||||||||| |||||||||||||||| | | |||||| || | | | Sbjct: 2531 ctcctaaaaggtaacggagaagtgcaaaggtttcctcagcctggacggaaatcaggcatg 2590 Query: 297 gagtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagt 356 ||||||||| ||| ||||||||||||||||||||| || ||||||||| | |||||| Sbjct: 2591 gagtgcaaaagcaaaagggagcttgactgcaagaccgacaagtcgagcaggggcgaaagc 2650 Query: 357 cggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttac 416 |||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 2651 cggctttagtgatccgacggttccgtgtggaagggccgtcgctcaacggataaaagttac 2710 Query: 417 tctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacct 476 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 2711 tctagggataacaggctgatcttccccaagagtccatatcgacgggaaggtttggcacct 2770 Query: 477 cgatgtcggctc 488 |||||||||||| Sbjct: 2771 cgatgtcggctc 2782 Score = 139 bits (70), Expect = 1e-29 Identities = 138/163 (84%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||| Sbjct: 2296 gtgaagatgcggactacctacacctggacagaaagaccctatgaagcttgactgtatcct 2355 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 || ||||| ||||||| |||| |||||||| ||||||| ||||| ||||| ||||||| Sbjct: 2356 ggaattgggtttgggcttttcttgcgcagcctaggtgggaggcgctgaaggttcccttcc 2415 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagct 163 | ||||||||| ||||| ||||||||||||||||| Sbjct: 2416 gggggggctggagccatcattgagagaccactctggaagagct 2458
>emb|Z15152.1|CHCPRRNL Chloroplast Chlamydomonas pitschmannii rrnL gene Length = 3017 Score = 293 bits (148), Expect = 3e-76 Identities = 253/288 (87%) Strand = Plus / Plus Query: 200 gacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcgt 259 |||||| |||||| | |||||| | ||||||| | |||||| ||| ||||||||||||| Sbjct: 2357 gacagtttcaggtgggcagtttatctggggcggatgcctcctaaagcgtaacggaggcgt 2416 Query: 260 gcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaagggagct 319 ||||||||| ||| | | |||||| || | | |||||| ||||||| ||| ||||| Sbjct: 2417 gcaaaggttctctcagtctggacggaaatcagacagcgagtgtaaaggcaaaagagagct 2476 Query: 320 tgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacggtgc 379 |||||| ||||| || ||||||||| | |||||| ||||||||||||||||||||||| Sbjct: 2477 tgactgtaagaccaacaagtcgagcaggggcgaaagccggccttagtgatccgacggtgc 2536 Query: 380 cgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatctt 439 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2537 cgtgtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatctt 2596 Query: 440 ccccaagagtccacatcgacgggaaggtttggcacctcgatgtcggct 487 ||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 2597 ccccaagagtccatatcgacgggaaggtttggcacctcgatgtcggct 2644 Score = 101 bits (51), Expect = 2e-18 Identities = 90/103 (87%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||| | | Sbjct: 2159 gtgaagatgcggactacctacacttggacagaaagaccctatgaagcttgactgtatctt 2218 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggc 103 || ||||| || |||| |||| |||||||| ||||||| |||| Sbjct: 2219 ggaattgggttcgggcttttcttgcgcagcctaggtgggaggc 2261 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 131 gagccatcagtgagataccactctggaagagct 163 ||||||||||||||| ||||||||||||||||| Sbjct: 2289 gagccatcagtgagagaccactctggaagagct 2321
>gb|L42989.1|CRECPRGOLC Chlamydomonas humicola chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-ChuI gene Length = 4005 Score = 291 bits (147), Expect = 1e-75 Identities = 240/271 (88%) Strand = Plus / Plus Query: 207 tcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcgtgcaaagg 266 |||||| | |||||| | ||||||| | |||||| ||| |||||||||| ||||||||| Sbjct: 2255 tcaggtgggcagtttatctggggcggatgcctcctaaagtgtaacggaggtgtgcaaagg 2314 Query: 267 tttcctcgggccagacggacattggtcctcgagtgcaaaggcagaagggagcttgactgc 326 || |||| | | |||||| || | ||| ||||| ||||||| |||||||||||||||| Sbjct: 2315 ttccctcagcctggacggaaatcaggccttgagtgtaaaggcaaaagggagcttgactgc 2374 Query: 327 aagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacggtgccgagtgg 386 ||||| || ||||||||| | |||||| ||||||||||||||||||||||||| |||| Sbjct: 2375 aagacctacaagtcgagcaggggcgaaagccggccttagtgatccgacggtgccgtgtgg 2434 Query: 387 aagggccgtcgctcaacggataaaagttactctagggataacaggctgatcttccccaag 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2435 aagggccgtcgctcaacggataaaagttactctagggataacaggctgatcttccccaag 2494 Query: 447 agtccacatcgacgggaaggtttggcacctc 477 ||| ||||||||||||||||||||||||||| Sbjct: 2495 agttcacatcgacgggaaggtttggcacctc 2525 Score = 117 bits (59), Expect = 4e-23 Identities = 92/103 (89%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 2050 gtgaagatgcggactacttgcacctggacagaaagaccctatgaagcttgactgtatcct 2109 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggc 103 || ||||| || |||| |||| |||||||| ||||||| |||| Sbjct: 2110 ggaattggtttcgggcttttcttgcgcagcctaggtgggaggc 2152
>gb|L42993.1|URMCPRGOL Uronema belkae large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2619 Score = 291 bits (147), Expect = 1e-75 Identities = 180/191 (94%) Strand = Plus / Plus Query: 297 gagtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagt 356 ||||||||||||| ||||| ||||||||||||||| || ||||||||| | |||||| Sbjct: 2322 gagtgcaaaggcataagggggcttgactgcaagacctacaagtcgagcaggggcgaaagc 2381 Query: 357 cggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttac 416 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 2382 cggccttagtgatccgacggttccgagtggaagggccgtcgctcaacggataaaagttac 2441 Query: 417 tctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacct 476 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 2442 tctagggataacaggctgatcttccccaagagttcacatcgacgggaaggtttggcacct 2501 Query: 477 cgatgtcggct 487 ||||||||||| Sbjct: 2502 cgatgtcggct 2512 Score = 69.9 bits (35), Expect = 7e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgt 55 ||||||||||||||||| | ||| |||||||||||||||||||||||| ||||| Sbjct: 2027 gtgaagatgcggactacttataccaggacagaaagaccctatgaagcttgactgt 2081 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 131 gagccatcagtgagataccactctggaag 159 ||||||||| ||||| ||||||||||||| Sbjct: 2157 gagccatcattgagagaccactctggaag 2185
>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5398 Score = 289 bits (146), Expect = 4e-75 Identities = 215/238 (90%) Strand = Plus / Plus Query: 242 aaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagtg 301 |||||||||||||| ||||||||||| |||| ||| |||||| || | | ||||| Sbjct: 3497 aaaaggtaacggagatgtgcaaaggttccctcaggctggacggaaatcagccgaagagtg 3556 Query: 302 caaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggcc 361 ||||||||||||||||||||||||||||| || ||||||||| | |||||| ||||| Sbjct: 3557 taaaggcagaagggagcttgactgcaagacctacaagtcgagcaggggcgaaagccggcc 3616 Query: 362 ttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactctag 421 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3617 ttagtgatccgacggtaccgagtggaagggccgtcgctcaacggataaaagttactctag 3676 Query: 422 ggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcga 479 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 3677 ggataacaggctgatcttccccaagagttcacatcgacgggaaggtttggcacctcga 3734 Score = 119 bits (60), Expect = 9e-24 Identities = 93/104 (89%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 2191 gtgaagatgcggactacctacacctggacagaaagaccctatgaagctttactgtaacct 2250 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcg 104 || |||| ||||||| |||| ||||||| ||||||| ||||| Sbjct: 2251 ggaattgaatttgggcttttcttgcgcagtctaggtgggaggcg 2294 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 131 gagccatcagtgagataccactctgga 157 ||||||||||||||| ||||||||||| Sbjct: 2321 gagccatcagtgagagaccactctgga 2347
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 289 bits (146), Expect = 4e-75 Identities = 227/254 (89%) Strand = Plus / Plus Query: 235 gcctcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcc 294 |||||| ||||||||||||||||| ||||||||| |||| ||| | ||| || | | Sbjct: 1660726 gcctcctaaaaggtaacggaggcgcgcaaaggttccctcaggctggttggaaatcagccg 1660785 Query: 295 tcgagtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaa 354 |||||||||||||| ||||||||||||||||||||| || ||||||||| ||||||| Sbjct: 1660786 acgagtgcaaaggcataagggagcttgactgcaagacctacaagtcgagcagggacgaaa 1660845 Query: 355 gtcggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagtt 414 ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct: 1660846 gtcggccttagtgatccgacggttctgagtggaagggccgtcgctcaacggataaaagtt 1660905 Query: 415 actctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcac 474 |||||||||||||||||||||||| | |||||||| |||||||||| | ||||||||||| Sbjct: 1660906 actctagggataacaggctgatctcctccaagagttcacatcgacgaggaggtttggcac 1660965 Query: 475 ctcgatgtcggctc 488 |||||||||||||| Sbjct: 1660966 ctcgatgtcggctc 1660979 Score = 289 bits (146), Expect = 4e-75 Identities = 227/254 (89%) Strand = Plus / Minus Query: 235 gcctcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcc 294 |||||| ||||||||||||||||| ||||||||| |||| ||| | ||| || | | Sbjct: 1048018 gcctcctaaaaggtaacggaggcgcgcaaaggttccctcaggctggttggaaatcagccg 1047959 Query: 295 tcgagtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaa 354 |||||||||||||| ||||||||||||||||||||| || ||||||||| ||||||| Sbjct: 1047958 acgagtgcaaaggcataagggagcttgactgcaagacctacaagtcgagcagggacgaaa 1047899 Query: 355 gtcggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagtt 414 ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct: 1047898 gtcggccttagtgatccgacggttctgagtggaagggccgtcgctcaacggataaaagtt 1047839 Query: 415 actctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcac 474 |||||||||||||||||||||||| | |||||||| |||||||||| | ||||||||||| Sbjct: 1047838 actctagggataacaggctgatctcctccaagagttcacatcgacgaggaggtttggcac 1047779 Query: 475 ctcgatgtcggctc 488 |||||||||||||| Sbjct: 1047778 ctcgatgtcggctc 1047765 Score = 101 bits (51), Expect = 2e-18 Identities = 90/103 (87%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||| ||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct: 1660494 gtgaagatacggactacctgcacccggacagaaagaccctatgaagctttactgtagctt 1660553 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggc 103 || |||||||| |||| || |||||||| ||||||| |||| Sbjct: 1660554 ggtattggcttcgggctttgactgcgcaggataggtgggaggc 1660596 Score = 101 bits (51), Expect = 2e-18 Identities = 90/103 (87%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||| ||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct: 1048250 gtgaagatacggactacctgcacccggacagaaagaccctatgaagctttactgtagctt 1048191 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggc 103 || |||||||| |||| || |||||||| ||||||| |||| Sbjct: 1048190 ggtattggcttcgggctttgactgcgcaggataggtgggaggc 1048148
>emb|X00512.1|ANRN03 Anacystis nidulans 23S rRNA gene and flanking regions Length = 3282 Score = 289 bits (146), Expect = 4e-75 Identities = 227/254 (89%) Strand = Plus / Plus Query: 235 gcctcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcc 294 |||||| ||||||||||||||||| ||||||||| |||| ||| | ||| || | | Sbjct: 2486 gcctcctaaaaggtaacggaggcgcgcaaaggttccctcaggctggttggaaatcagccg 2545 Query: 295 tcgagtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaa 354 |||||||||||||| ||||||||||||||||||||| || ||||||||| ||||||| Sbjct: 2546 acgagtgcaaaggcataagggagcttgactgcaagacctacaagtcgagcagggacgaaa 2605 Query: 355 gtcggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagtt 414 ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct: 2606 gtcggccttagtgatccgacggttctgagtggaagggccgtcgctcaacggataaaagtt 2665 Query: 415 actctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcac 474 |||||||||||||||||||||||| | |||||||| |||||||||| | ||||||||||| Sbjct: 2666 actctagggataacaggctgatctcctccaagagttcacatcgacgaggaggtttggcac 2725 Query: 475 ctcgatgtcggctc 488 |||||||||||||| Sbjct: 2726 ctcgatgtcggctc 2739 Score = 101 bits (51), Expect = 2e-18 Identities = 90/103 (87%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||| ||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct: 2256 gtgaagatacggactacctgcacccggacagaaagaccctatgaagctttactgtagctt 2315 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggc 103 || |||||||| |||| || |||||||| ||||||| |||| Sbjct: 2316 ggtattggcttcgggctttgactgcgcaggataggtgggaggc 2358
>emb|X68921.1|CHCHRRNL1 Chloroplast Chlamydomonas humicola rrnL gene, exon 1 Length = 2524 Score = 289 bits (146), Expect = 4e-75 Identities = 239/270 (88%) Strand = Plus / Plus Query: 207 tcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcgtgcaaagg 266 |||||| | |||||| | ||||||| | |||||| ||| |||||||||| ||||||||| Sbjct: 2255 tcaggtgggcagtttatctggggcggatgcctcctaaagtgtaacggaggtgtgcaaagg 2314 Query: 267 tttcctcgggccagacggacattggtcctcgagtgcaaaggcagaagggagcttgactgc 326 || |||| | | |||||| || | ||| ||||| ||||||| |||||||||||||||| Sbjct: 2315 ttccctcagcctggacggaaatcaggccttgagtgtaaaggcaaaagggagcttgactgc 2374 Query: 327 aagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacggtgccgagtgg 386 ||||| || ||||||||| | |||||| ||||||||||||||||||||||||| |||| Sbjct: 2375 aagacctacaagtcgagcaggggcgaaagccggccttagtgatccgacggtgccgtgtgg 2434 Query: 387 aagggccgtcgctcaacggataaaagttactctagggataacaggctgatcttccccaag 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2435 aagggccgtcgctcaacggataaaagttactctagggataacaggctgatcttccccaag 2494 Query: 447 agtccacatcgacgggaaggtttggcacct 476 ||| |||||||||||||||||||||||||| Sbjct: 2495 agttcacatcgacgggaaggtttggcacct 2524 Score = 117 bits (59), Expect = 4e-23 Identities = 92/103 (89%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 2050 gtgaagatgcggactacttgcacctggacagaaagaccctatgaagcttgactgtatcct 2109 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggc 103 || ||||| || |||| |||| |||||||| ||||||| |||| Sbjct: 2110 ggaattggtttcgggcttttcttgcgcagcctaggtgggaggc 2152
>emb|AM084275.1| Cyanoptyche gloeocystis cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 34.90 Length = 4586 Score = 289 bits (146), Expect = 4e-75 Identities = 227/254 (89%) Strand = Plus / Plus Query: 235 gcctcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcc 294 |||||| |||| |||||||||||| ||||||||| |||| | | ||| || || ||| Sbjct: 4096 gcctcctaaaaagtaacggaggcgcgcaaaggttccctcagactggacagaaatcagtcg 4155 Query: 295 tcgagtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaa 354 | ||||| ||||||||||||||||||||||| ||||| || ||||| ||| |||||| Sbjct: 4156 tagagtgtaaaggcagaagggagcttgactgtaagacctacaagtcgaacaggaacgaaa 4215 Query: 355 gtcggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagtt 414 || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 4216 gttggccttagtgatccgacggtgccgcgtggaagggccgtcgctcaacggataaaagtt 4275 Query: 415 actctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcac 474 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 4276 actctagggataacaggctgatctcccccaagagtccacatcgacggggaggtttggcac 4335 Query: 475 ctcgatgtcggctc 488 |||||||||||||| Sbjct: 4336 ctcgatgtcggctc 4349 Score = 101 bits (51), Expect = 2e-18 Identities = 54/55 (98%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgt 55 |||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 3864 gtgaagatgcggactacctgcaccaggacagaaagaccctatgaagctttactgt 3918 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 131 gagccatcagtgagataccactctggaagagctcggattctaac 174 ||||||||||||||||||||||||||||||||| | |||||||| Sbjct: 3994 gagccatcagtgagataccactctggaagagctagaattctaac 4037
>emb|AM084273.1| Paulinella chromatophora plastid 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain M 0880 Length = 4934 Score = 289 bits (146), Expect = 4e-75 Identities = 227/254 (89%) Strand = Plus / Plus Query: 235 gcctcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcc 294 |||||| ||||||||||||||||| |||||||||||||| ||| | ||| || | | Sbjct: 4434 gcctcctaaaaggtaacggaggcgcgcaaaggtttcctcaggctggttggaaatcagccg 4493 Query: 295 tcgagtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaa 354 ||||||||||||||||||| |||||||||| |||| || ||||| ||| ||||||| Sbjct: 4494 gcgagtgcaaaggcagaaggaagcttgactgtgagacctacaagtcgaacagggacgaaa 4553 Query: 355 gtcggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagtt 414 ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct: 4554 gtcggccttagtgatccgacggttctgagtggaagggccgtcgctcaacggataaaagtt 4613 Query: 415 actctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcac 474 |||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||| Sbjct: 4614 actctagggataacaggctgatctcccccaagagttcacatcgacggggaggtttggcac 4673 Query: 475 ctcgatgtcggctc 488 |||||||||||||| Sbjct: 4674 ctcgatgtcggctc 4687 Score = 93.7 bits (47), Expect = 5e-16 Identities = 53/55 (96%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgt 55 ||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 4202 gtgaagatgcggactacgtgcacccggacagaaagaccctatgaagctttactgt 4256
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 289 bits (146), Expect = 4e-75 Identities = 227/254 (89%) Strand = Plus / Minus Query: 235 gcctcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcc 294 |||||| ||||||||||||||||| ||||||||| |||| ||| | ||| || | | Sbjct: 2656060 gcctcctaaaaggtaacggaggcgcgcaaaggttccctcaggctggttggaaatcagccg 2656001 Query: 295 tcgagtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaa 354 |||||||||||||| ||||||||||||||||||||| || ||||||||| ||||||| Sbjct: 2656000 acgagtgcaaaggcataagggagcttgactgcaagacctacaagtcgagcagggacgaaa 2655941 Query: 355 gtcggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagtt 414 ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct: 2655940 gtcggccttagtgatccgacggttctgagtggaagggccgtcgctcaacggataaaagtt 2655881 Query: 415 actctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcac 474 |||||||||||||||||||||||| | |||||||| |||||||||| | ||||||||||| Sbjct: 2655880 actctagggataacaggctgatctcctccaagagttcacatcgacgaggaggtttggcac 2655821 Query: 475 ctcgatgtcggctc 488 |||||||||||||| Sbjct: 2655820 ctcgatgtcggctc 2655807 Score = 289 bits (146), Expect = 4e-75 Identities = 227/254 (89%) Strand = Plus / Plus Query: 235 gcctcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcc 294 |||||| ||||||||||||||||| ||||||||| |||| ||| | ||| || | | Sbjct: 572861 gcctcctaaaaggtaacggaggcgcgcaaaggttccctcaggctggttggaaatcagccg 572920 Query: 295 tcgagtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaa 354 |||||||||||||| ||||||||||||||||||||| || ||||||||| ||||||| Sbjct: 572921 acgagtgcaaaggcataagggagcttgactgcaagacctacaagtcgagcagggacgaaa 572980 Query: 355 gtcggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagtt 414 ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct: 572981 gtcggccttagtgatccgacggttctgagtggaagggccgtcgctcaacggataaaagtt 573040 Query: 415 actctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcac 474 |||||||||||||||||||||||| | |||||||| |||||||||| | ||||||||||| Sbjct: 573041 actctagggataacaggctgatctcctccaagagttcacatcgacgaggaggtttggcac 573100 Query: 475 ctcgatgtcggctc 488 |||||||||||||| Sbjct: 573101 ctcgatgtcggctc 573114 Score = 101 bits (51), Expect = 2e-18 Identities = 90/103 (87%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||| ||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct: 2656292 gtgaagatacggactacctgcacccggacagaaagaccctatgaagctttactgtagctt 2656233 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggc 103 || |||||||| |||| || |||||||| ||||||| |||| Sbjct: 2656232 ggtattggcttcgggctttgactgcgcaggataggtgggaggc 2656190 Score = 101 bits (51), Expect = 2e-18 Identities = 90/103 (87%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||| ||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct: 572629 gtgaagatacggactacctgcacccggacagaaagaccctatgaagctttactgtagctt 572688 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggc 103 || |||||||| |||| || |||||||| ||||||| |||| Sbjct: 572689 ggtattggcttcgggctttgactgcgcaggataggtgggaggc 572731
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 287 bits (145), Expect = 2e-74 Identities = 259/294 (88%), Gaps = 6/294 (2%) Strand = Plus / Plus Query: 199 ggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcg 258 ||||||||| |||||||||||||||||||||||||||||||| |||| | ||||||||| Sbjct: 2158 ggacagtcttaggtagacagtttctatggggcgtaggcctcctaaaaagcaacggaggca 2217 Query: 259 tgcaaa--ggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaaggga 316 |||||| |||||||| ||||||| || || || | | ||||||||||||| |||||| Sbjct: 2218 tgcaaaaaggtttcctggggccaggcg---ataggccattgagtgcaaaggcataaggga 2274 Query: 317 gcttgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacgg 376 |||||| ||||||||||| ||||||||||| ||| ||||| ||||||||||||||| || Sbjct: 2275 gcttgattgcaagactcatccgtcgagcagggactaaagttggccttagtgatccggcga 2334 Query: 377 tgccgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgat 436 | | |||||| |||| ||| ||||||||||||||| |||||||||||||||||||||||| Sbjct: 2335 tactgagtgggagggtcgttgctcaacggataaaaattactctagggataacaggctgat 2394 Query: 437 cttccccaagagtccacatcgac-gggaaggtttggcacctcgatgtcggctct 489 |||||||||||| |||| |||| ||||||||||||||||||||||||| |||| Sbjct: 2395 cttccccaagagctcacaccgacagggaaggtttggcacctcgatgtcgactct 2448 Score = 103 bits (52), Expect = 5e-19 Identities = 98/112 (87%), Gaps = 1/112 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttt-actgttccc 59 |||||||||| |||||| |||||||||| ||||||||||||||||||| ||||||||| Sbjct: 1979 gtgaagatgcagactactcacacctggacaaaaagaccctatgaagcttttactgttccc 2038 Query: 60 tgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaagg 111 |||||||| ||| ||||||||||||| ||| ||| || |||| |||||||| Sbjct: 2039 tgggattgacttggggcctttcctgcacagtttaaatgcaaggagaagaagg 2090 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 agtgagataccactctggaa 158 |||||||||||||||||||| Sbjct: 2106 agtgagataccactctggaa 2125
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 287 bits (145), Expect = 2e-74 Identities = 259/294 (88%), Gaps = 6/294 (2%) Strand = Plus / Plus Query: 199 ggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcg 258 ||||||||| |||||||||||||||||||||||||||||||| |||| | ||||||||| Sbjct: 2158 ggacagtcttaggtagacagtttctatggggcgtaggcctcctaaaaagcaacggaggca 2217 Query: 259 tgcaaa--ggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaaggga 316 |||||| |||||||| ||||||| || || || | | ||||||||||||| |||||| Sbjct: 2218 tgcaaaaaggtttcctggggccaggcg---ataggccattgagtgcaaaggcataaggga 2274 Query: 317 gcttgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacgg 376 ||||| ||||||||||| ||||||||||| ||| ||||| ||||||||||||||| || Sbjct: 2275 gcttggttgcaagactcatccgtcgagcagggactaaagttggccttagtgatccggcga 2334 Query: 377 tgccgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgat 436 | | |||||| |||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2335 tactgagtgggagggtcgttgctcaacggataaaagttactctagggataacaggctgat 2394 Query: 437 cttccccaagagtccacatcgac-gggaaggtttggcacctcgatgtcggctct 489 |||||||||||| |||| |||| ||||||||||||||||||||||||| |||| Sbjct: 2395 cttccccaagagctcacaccgacggggaaggtttggcacctcgatgtcgactct 2448 Score = 103 bits (52), Expect = 5e-19 Identities = 98/112 (87%), Gaps = 1/112 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttt-actgttccc 59 |||||||||| |||||| |||||||||| ||||||||||||||||||| ||||||||| Sbjct: 1979 gtgaagatgcagactactcacacctggacaaaaagaccctatgaagcttttactgttccc 2038 Query: 60 tgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaagg 111 |||||||| ||| ||||||||||||| ||| ||| || |||| |||||||| Sbjct: 2039 tgggattgacttggggcctttcctgcacagtttaaatgcaaggagaagaagg 2090 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 agtgagataccactctggaa 158 |||||||||||||||||||| Sbjct: 2106 agtgagataccactctggaa 2125
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 287 bits (145), Expect = 2e-74 Identities = 259/294 (88%), Gaps = 6/294 (2%) Strand = Plus / Plus Query: 199 ggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcg 258 ||||||||| |||||||||||||||||||||||||||||||| |||| | ||||||||| Sbjct: 2158 ggacagtcttaggtagacagtttctatggggcgtaggcctcctaaaaagcaacggaggca 2217 Query: 259 tgcaaa--ggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaaggga 316 |||||| |||||||| ||||||| || || || | | ||||||||||||| ||||| Sbjct: 2218 tgcaaaaaggtttcctggggccaggcg---ataggccattgagtgcaaaggcataagggg 2274 Query: 317 gcttgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacgg 376 |||||| ||||||||||| ||||||||||| ||| ||||| ||||||||||||||| || Sbjct: 2275 gcttgattgcaagactcatccgtcgagcagggactaaagttggccttagtgatccggcga 2334 Query: 377 tgccgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgat 436 | | |||||| |||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2335 tactgagtgggagggtcgttgctcaacggataaaagttactctagggataacaggctgat 2394 Query: 437 cttccccaagagtccacatcgac-gggaaggtttggcacctcgatgtcggctct 489 |||||||||||| |||| |||| ||||||||||||||||||||||||| |||| Sbjct: 2395 cttccccaagagctcacaccgacagggaaggtttggcacctcgatgtcgactct 2448 Score = 103 bits (52), Expect = 5e-19 Identities = 98/112 (87%), Gaps = 1/112 (0%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttt-actgttccc 59 |||||||||| |||||| |||||||||| ||||||||||||||||||| ||||||||| Sbjct: 1979 gtgaagatgcagactactcacacctggacaaaaagaccctatgaagcttttactgttccc 2038 Query: 60 tgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaagg 111 |||||||| ||| ||||||||||||| ||| ||| || |||| |||||||| Sbjct: 2039 tgggattgacttggggcctttcctgcacagtttaaatgcaaggagaagaagg 2090 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 agtgagataccactctggaa 158 |||||||||||||||||||| Sbjct: 2106 agtgagataccactctggaa 2125
>gb|L07260.1|PTERGD Porphyra purpurea chloroplast 23S ribosomal RNA gene, 3' end, 5S ribosomal RNA gene, complete cds Length = 1064 Score = 287 bits (145), Expect = 2e-74 Identities = 259/297 (87%) Strand = Plus / Plus Query: 192 ggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaac 251 |||||||| ||||| ||||||| |||||| ||||||| |||||| |||| ||||| Sbjct: 28 ggccaaggaacagttccaggtaggcagtttgactggggcggtcgcctcctaaaaagtaac 87 Query: 252 ggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaaggcaga 311 ||||||||||||||||| ||| ||| | |||| || ||| | ||||| ||||||| | Sbjct: 88 ggaggcgtgcaaaggttctctcaggctggtcggaaatcagtcgtagagtgtaaaggcata 147 Query: 312 agggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatcc 371 || ||||||||||| |||| || ||||| |||||||||||||||||||||||||||| Sbjct: 148 agagagcttgactgtgagacctacaagtcgaacagagacgaaagtcggccttagtgatcc 207 Query: 372 gacggtgccgagtggaagggccgtcgctcaacggataaaagttactctagggataacagg 431 | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 ggcggtaccgagtggaagggccgtcgctcaacggataaaagttactctagggataacagg 267 Query: 432 ctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgatgtcggctc 488 ||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||| Sbjct: 268 ctgatctcccccaagagttcacatcgacggggaggtttggcacctcgatgtcggctc 324
>gb|L07259.1|PTERGC Porphyra purpurea 23S ribosomal RNA gene, 3' end, 5S ribosomal RNA gene, complete cds Length = 1080 Score = 287 bits (145), Expect = 2e-74 Identities = 259/297 (87%) Strand = Plus / Plus Query: 192 ggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaac 251 |||||||| ||||| ||||||| |||||| ||||||| |||||| |||| ||||| Sbjct: 28 ggccaaggaacagttccaggtaggcagtttgactggggcggtcgcctcctaaaaagtaac 87 Query: 252 ggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaaggcaga 311 ||||||||||||||||| ||| ||| | |||| || ||| | ||||| ||||||| | Sbjct: 88 ggaggcgtgcaaaggttctctcaggctggtcggaaatcagtcgtagagtgtaaaggcata 147 Query: 312 agggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatcc 371 || ||||||||||| |||| || ||||| |||||||||||||||||||||||||||| Sbjct: 148 agagagcttgactgtgagacctacaagtcgaacagagacgaaagtcggccttagtgatcc 207 Query: 372 gacggtgccgagtggaagggccgtcgctcaacggataaaagttactctagggataacagg 431 | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 ggcggtaccgagtggaagggccgtcgctcaacggataaaagttactctagggataacagg 267 Query: 432 ctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgatgtcggctc 488 ||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||| Sbjct: 268 ctgatctcccccaagagttcacatcgacggggaggtttggcacctcgatgtcggctc 324
>gb|L42985.1|RTCCPRGOL Carteria crucifera large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2920 Score = 287 bits (145), Expect = 2e-74 Identities = 253/289 (87%) Strand = Plus / Plus Query: 200 gacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcgt 259 |||||| |||||| | |||||| | ||||||| | |||| |||||||||| |||| || Sbjct: 2526 gacagtttcaggtgggcagtttatttggggcgaatacctcataaaaggtaactgaggtgt 2585 Query: 260 gcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaagggagct 319 ||||||||| ||| | | |||||| || | | | ||||||||||||| ||| ||||| Sbjct: 2586 gcaaaggttctctcagcctggacggaaatcaggcattgagtgcaaaggcaaaagagagct 2645 Query: 320 tgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacggtgc 379 |||||||||||| ||| ||||||||| | |||||| ||| ||||||||||||||||||| Sbjct: 2646 tgactgcaagacccacaagtcgagcaggggcgaaagccggtcttagtgatccgacggtgc 2705 Query: 380 cgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatctt 439 || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 2706 cgcgtggaagggccgtcgctcaacgaataaaagttactctagggataacaggctgatctt 2765 Query: 440 ccccaagagtccacatcgacgggaaggtttggcacctcgatgtcggctc 488 ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 2766 ccccaagagtccatatcgacgggaaggtttggcacctcgatgtcggctc 2814 Score = 91.7 bits (46), Expect = 2e-15 Identities = 94/110 (85%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||| |||||||||||||||||||||||||||| ||||| ||| Sbjct: 2328 gtgaagatgcggactaatattacctggacagaaagaccctatgaagcttgactgtatcct 2387 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaag 110 || ||||| ||||||| |||| ||||||| ||||||| |||| |||||| Sbjct: 2388 ggaattgggtttgggcttttcttgcgcagtctaggtgggaggctaagaag 2437 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 131 gagccatcagtgagataccactctggaagagctcggattctaa 173 ||||||||||||||| ||||||||||||||||| | ||||||| Sbjct: 2458 gagccatcagtgagagaccactctggaagagctagaattctaa 2500
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 287 bits (145), Expect = 2e-74 Identities = 259/297 (87%) Strand = Plus / Plus Query: 192 ggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaac 251 |||||||| ||||| ||||||| |||||| ||||||| |||||| |||| ||||| Sbjct: 190186 ggccaaggaacagttccaggtaggcagtttgactggggcggtcgcctcctaaaaagtaac 190245 Query: 252 ggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaaggcaga 311 ||||||||||||||||| ||| ||| | |||| || ||| | ||||| ||||||| | Sbjct: 190246 ggaggcgtgcaaaggttctctcaggctggtcggaaatcagtcgtagagtgtaaaggcata 190305 Query: 312 agggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatcc 371 || ||||||||||| |||| || ||||| |||||||||||||||||||||||||||| Sbjct: 190306 agagagcttgactgtgagacctacaagtcgaacagagacgaaagtcggccttagtgatcc 190365 Query: 372 gacggtgccgagtggaagggccgtcgctcaacggataaaagttactctagggataacagg 431 | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 190366 ggcggtaccgagtggaagggccgtcgctcaacggataaaagttactctagggataacagg 190425 Query: 432 ctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgatgtcggctc 488 ||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||| Sbjct: 190426 ctgatctcccccaagagttcacatcgacggggaggtttggcacctcgatgtcggctc 190482 Score = 287 bits (145), Expect = 2e-74 Identities = 259/297 (87%) Strand = Plus / Plus Query: 192 ggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaac 251 |||||||| ||||| ||||||| |||||| ||||||| |||||| |||| ||||| Sbjct: 151743 ggccaaggaacagttccaggtaggcagtttgactggggcggtcgcctcctaaaaagtaac 151802 Query: 252 ggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaaggcaga 311 ||||||||||||||||| ||| ||| | |||| || ||| | ||||| ||||||| | Sbjct: 151803 ggaggcgtgcaaaggttctctcaggctggtcggaaatcagtcgtagagtgtaaaggcata 151862 Query: 312 agggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatcc 371 || ||||||||||| |||| || ||||| |||||||||||||||||||||||||||| Sbjct: 151863 agagagcttgactgtgagacctacaagtcgaacagagacgaaagtcggccttagtgatcc 151922 Query: 372 gacggtgccgagtggaagggccgtcgctcaacggataaaagttactctagggataacagg 431 | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 151923 ggcggtaccgagtggaagggccgtcgctcaacggataaaagttactctagggataacagg 151982 Query: 432 ctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgatgtcggctc 488 ||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||| Sbjct: 151983 ctgatctcccccaagagttcacatcgacggggaggtttggcacctcgatgtcggctc 152039 Score = 127 bits (64), Expect = 4e-26 Identities = 97/108 (89%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct: 189995 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgtagctt 190054 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 108 || ||||| ||||||| |||| ||||||| ||||||| |||| |||| Sbjct: 190055 ggaattgggtttgggcttttcttgcgcaggataggtgggaggctaaga 190102 Score = 127 bits (64), Expect = 4e-26 Identities = 97/108 (89%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct: 151552 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgtagctt 151611 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 108 || ||||| ||||||| |||| ||||||| ||||||| |||| |||| Sbjct: 151612 ggaattgggtttgggcttttcttgcgcaggataggtgggaggctaaga 151659 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Plus Query: 131 gagccatcagtgagataccactctggaagagctcggattctaaccttgt 179 |||||| | ||||||||||||||| ||| |||| | ||||||||||||| Sbjct: 190125 gagccaacggtgagataccactctagaaaagctagaattctaaccttgt 190173 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Plus Query: 140 gtgagataccactctggaagagctcggattctaaccttg 178 ||||||||||||||| ||| |||| | |||||||||||| Sbjct: 151691 gtgagataccactctagaaaagctagaattctaaccttg 151729
>gb|AY584525.1| Plectonema terebrans strain CCAP 1463-4 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 283 bits (143), Expect = 3e-73 Identities = 254/291 (87%) Strand = Plus / Plus Query: 198 gggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggc 257 |||||||| |||||| | |||||| ||||||| |||||| ||| |||||||||||| Sbjct: 1812 gggacagtatcaggtgggcagtttgactggggcggtcgcctcctaaatggtaacggaggc 1871 Query: 258 gtgcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaaggcagaagggag 317 | ||||||||| |||| ||| | ||| || | | ||||||| ||||||| ||||||| Sbjct: 1872 gcgcaaaggttccctccggctggttggaaatcagccttcgagtgtaaaggcataagggag 1931 Query: 318 cttgactgcaagactcacccgtcgagcagagacgaaagtcggccttagtgatccgacggt 377 ||||||||| ||||| || ||||||||| |||||||| |||||||||||||||||||| Sbjct: 1932 cttgactgcgagactgacaagtcgagcaggtacgaaagtaggccttagtgatccgacggt 1991 Query: 378 gccgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatc 437 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1992 tccgcgtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatc 2051 Query: 438 ttccccaagagtccacatcgacgggaaggtttggcacctcgatgtcggctc 488 | |||||||||| |||||||||||| ||||||||||||||||||||||||| Sbjct: 2052 tcccccaagagttcacatcgacggggaggtttggcacctcgatgtcggctc 2102 Score = 93.7 bits (47), Expect = 5e-16 Identities = 53/55 (96%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgt 55 |||||||| ||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1617 gtgaagatacggactacctgcacccggacagaaagaccctatgaagctttactgt 1671
>gb|AY584523.1| Microcystis sp. strain PCC 7820 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 281 bits (142), Expect = 1e-72 Identities = 226/254 (88%) Strand = Plus / Plus Query: 235 gcctcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcc 294 |||||| ||||||||||||||||| ||||||||| |||||| || | ||| || || | Sbjct: 1845 gcctcctaaaaggtaacggaggcgcgcaaaggttccctcggtcccgttggaaatgggacg 1904 Query: 295 tcgagtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaa 354 ||||||||| ||||||||||||||||||| |||| ||| ||||| ||| ||||||| Sbjct: 1905 atgagtgcaaaagcagaagggagcttgactgtgagacccacaagtcgaacagggacgaaa 1964 Query: 355 gtcggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagtt 414 |||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 1965 gtcggctttagtgatccgacggcaccgcgtggaagggccgtcgctcaacggataaaagtt 2024 Query: 415 actctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcac 474 |||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||| Sbjct: 2025 actctagggataacaggctgatctcccccaagagttcacatcgacggggaggtttggcac 2084 Query: 475 ctcgatgtcggctc 488 |||||||||||||| Sbjct: 2085 ctcgatgtcggctc 2098 Score = 111 bits (56), Expect = 2e-21 Identities = 71/76 (93%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1613 gtgaagatacggactacctgcacctggacagaaagaccctatgaagctttactgtagcct 1672 Query: 61 gggattggctttgggc 76 || |||||||| |||| Sbjct: 1673 ggaattggcttcgggc 1688
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 281 bits (142), Expect = 1e-72 Identities = 226/254 (88%) Strand = Plus / Minus Query: 235 gcctcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcc 294 |||||| ||| ||||||||||||| ||||||||| |||| ||| | |||| || | | Sbjct: 1568627 gcctcctaaacggtaacggaggcgcgcaaaggttccctcaggctggtcggaaatcagccg 1568568 Query: 295 tcgagtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaa 354 ||||| ||||||| |||||||||||||||| |||| || ||||||||||||||||| Sbjct: 1568567 cagagtgtaaaggcataagggagcttgactgcgagacctacaagtcgagcagagacgaaa 1568508 Query: 355 gtcggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagtt 414 ||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||| Sbjct: 1568507 gtcggccttagtgatccgacggttctgcatggaagggccgtcgctcaacggataaaagtt 1568448 Query: 415 actctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcac 474 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 1568447 actctagggataacaggctgatctcccccaagagtccacatcgacggggaggtttggcac 1568388 Query: 475 ctcgatgtcggctc 488 |||||||||||||| Sbjct: 1568387 ctcgatgtcggctc 1568374 Score = 73.8 bits (37), Expect = 5e-10 Identities = 49/53 (92%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttact 53 |||||||| |||||||| || ||| |||||||||||||||||||||||||||| Sbjct: 1568843 gtgaagatacggactacttgtacccggacagaaagaccctatgaagctttact 1568791
>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome Length = 135599 Score = 281 bits (142), Expect = 1e-72 Identities = 226/254 (88%) Strand = Plus / Minus Query: 235 gcctcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcc 294 |||||| |||| |||||||||||| ||||||||| |||| ||| ||| || || | | Sbjct: 113160 gcctcctaaaaagtaacggaggcgcgcaaaggttccctcaggctggacagaaatcagccg 113101 Query: 295 tcgagtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaa 354 ||||| ||||||||||||||||||||||| ||||| || ||||| ||| |||||| Sbjct: 113100 aagagtgtaaaggcagaagggagcttgactgtaagacctacaagtcgaacaggaacgaaa 113041 Query: 355 gtcggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagtt 414 || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 113040 gttggccttagtgatccgacggtaccgagtggaagggccgtcgctcaacggataaaagtt 112981 Query: 415 actctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcac 474 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 112980 actctagggataacaggctgatctcccccaagagtccacatcgacggggaggtttggcac 112921 Query: 475 ctcgatgtcggctc 488 |||||||||||||| Sbjct: 112920 ctcgatgtcggctc 112907 Score = 281 bits (142), Expect = 1e-72 Identities = 226/254 (88%) Strand = Plus / Plus Query: 235 gcctcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcc 294 |||||| |||| |||||||||||| ||||||||| |||| ||| ||| || || | | Sbjct: 4357 gcctcctaaaaagtaacggaggcgcgcaaaggttccctcaggctggacagaaatcagccg 4416 Query: 295 tcgagtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaa 354 ||||| ||||||||||||||||||||||| ||||| || ||||| ||| |||||| Sbjct: 4417 aagagtgtaaaggcagaagggagcttgactgtaagacctacaagtcgaacaggaacgaaa 4476 Query: 355 gtcggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagtt 414 || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 4477 gttggccttagtgatccgacggtaccgagtggaagggccgtcgctcaacggataaaagtt 4536 Query: 415 actctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcac 474 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 4537 actctagggataacaggctgatctcccccaagagtccacatcgacggggaggtttggcac 4596 Query: 475 ctcgatgtcggctc 488 |||||||||||||| Sbjct: 4597 ctcgatgtcggctc 4610 Score = 109 bits (55), Expect = 9e-21 Identities = 91/103 (88%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| Sbjct: 113392 gtgaagatgcggactacctgcaccaggacagaaagaccctatgaagctttactgtagcct 113333 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggc 103 | ||||| || |||| |||| ||||||| ||||||| |||| Sbjct: 113332 gatattgggttcgggcttttcttgcgcagtataggtgggaggc 113290 Score = 109 bits (55), Expect = 9e-21 Identities = 91/103 (88%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| Sbjct: 4125 gtgaagatgcggactacctgcaccaggacagaaagaccctatgaagctttactgtagcct 4184 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggc 103 | ||||| || |||| |||| ||||||| ||||||| |||| Sbjct: 4185 gatattgggttcgggcttttcttgcgcagtataggtgggaggc 4227 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 131 gagccatcagtgagataccactctggaagagctcggattctaac 174 ||||| ||||||||||||||||||||||||||| | |||||||| Sbjct: 113262 gagccgtcagtgagataccactctggaagagctagaattctaac 113219 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 131 gagccatcagtgagataccactctggaagagctcggattctaac 174 ||||| ||||||||||||||||||||||||||| | |||||||| Sbjct: 4255 gagccgtcagtgagataccactctggaagagctagaattctaac 4298
>emb|X03848.1|CHCERRN1 Chlorella ellipsoidea chloroplast 16S-23S DNA spacer and ORF1 to ORF4 DNA Length = 5604 Score = 281 bits (142), Expect = 1e-72 Identities = 218/242 (90%), Gaps = 1/242 (0%) Strand = Plus / Minus Query: 247 gtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaag 306 |||||||||||||||||||||| |||| ||| |||||| || | | ||||| |||| Sbjct: 5525 gtaacggaggcgtgcaaaggttccctcaggctggacggaaatcagccgaagagtgtaaag 5466 Query: 307 gcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggccttagt 366 ||| ||||||||||||||||||||| || ||||||||| | ||||| ||||||||| Sbjct: 5465 gcaaaagggagcttgactgcaagacctacaagtcgagcaggggcgaaacg-ggccttagt 5407 Query: 367 gatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactctagggata 426 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5406 gatccgacggtaccgagtggaagggccgtcgctcaacggataaaagttactctagggata 5347 Query: 427 acaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgatgtcggc 486 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 5346 acaggctgatcttccccaagagttcacatcgacgggaaggtttggcacctcgatgtcggc 5287 Query: 487 tc 488 || Sbjct: 5286 tc 5285
>gb|M36158.1|CHLCPG C.ellipsoidea chloroplast 23S ribosomal RNA gene, complete sequence Length = 3359 Score = 281 bits (142), Expect = 1e-72 Identities = 218/242 (90%), Gaps = 1/242 (0%) Strand = Plus / Plus Query: 247 gtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaag 306 |||||||||||||||||||||| |||| ||| |||||| || | | ||||| |||| Sbjct: 2679 gtaacggaggcgtgcaaaggttccctcaggctggacggaaatcagccgaagagtgtaaag 2738 Query: 307 gcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggccttagt 366 ||| ||||||||||||||||||||| || ||||||||| | ||||| ||||||||| Sbjct: 2739 gcaaaagggagcttgactgcaagacctacaagtcgagcaggggcgaaacg-ggccttagt 2797 Query: 367 gatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactctagggata 426 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2798 gatccgacggtaccgagtggaagggccgtcgctcaacggataaaagttactctagggata 2857 Query: 427 acaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgatgtcggc 486 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 2858 acaggctgatcttccccaagagttcacatcgacgggaaggtttggcacctcgatgtcggc 2917 Query: 487 tc 488 || Sbjct: 2918 tc 2919 Score = 83.8 bits (42), Expect = 5e-13 Identities = 89/102 (87%), Gaps = 2/102 (1%) Strand = Plus / Plus Query: 3 gaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccctgg 62 ||||||| ||||| ||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 2438 gaagatgaggacttcctgcacctggacagaaagaccctatgaagcttgactgtagcctgg 2497 Query: 63 gattggctttgggcctttcctgcgcagcttaggtggaaggcg 104 |||| || ||| ||||| |||||||| ||||||| ||||| Sbjct: 2498 aattgaattcggg-ctttcttgcgcagc-taggtgggaggcg 2537
>gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete genome Length = 195867 Score = 278 bits (140), Expect = 2e-71 Identities = 233/264 (88%) Strand = Plus / Plus Query: 225 tggggcgtaggcctcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacgg 284 ||||||| | |||| | |||| |||||||||| ||||||||||| |||| ||| ||||| Sbjct: 194117 tggggcggatgcctgctaaaatgtaacggaggtgtgcaaaggttccctcaggctggacgg 194176 Query: 285 acattggtcctcgagtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagc 344 | || | | ||||| ||||| ||||||||||||||||||||||| || ||||||| Sbjct: 194177 aaatcagctgtagagtgtaaaggtagaagggagcttgactgcaagacctacaagtcgagc 194236 Query: 345 agagacgaaagtcggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacg 404 || | |||||| ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 194237 aggggcgaaagccggccttagtgatccgacggtaccgagtggaagggccgtcgctcaacg 194296 Query: 405 gataaaagttactctagggataacaggctgatcttccccaagagtccacatcgacgggaa 464 |||||||||||||||||||||||||||||||||| |||||||||| | |||||||||| | Sbjct: 194297 gataaaagttactctagggataacaggctgatctcccccaagagttcgcatcgacgggga 194356 Query: 465 ggtttggcacctcgatgtcggctc 488 |||||||||||||||||||||||| Sbjct: 194357 ggtttggcacctcgatgtcggctc 194380 Score = 278 bits (140), Expect = 2e-71 Identities = 233/264 (88%) Strand = Plus / Minus Query: 225 tggggcgtaggcctcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacgg 284 ||||||| | |||| | |||| |||||||||| ||||||||||| |||| ||| ||||| Sbjct: 142665 tggggcggatgcctgctaaaatgtaacggaggtgtgcaaaggttccctcaggctggacgg 142606 Query: 285 acattggtcctcgagtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagc 344 | || | | ||||| ||||| ||||||||||||||||||||||| || ||||||| Sbjct: 142605 aaatcagctgtagagtgtaaaggtagaagggagcttgactgcaagacctacaagtcgagc 142546 Query: 345 agagacgaaagtcggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacg 404 || | |||||| ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 142545 aggggcgaaagccggccttagtgatccgacggtaccgagtggaagggccgtcgctcaacg 142486 Query: 405 gataaaagttactctagggataacaggctgatcttccccaagagtccacatcgacgggaa 464 |||||||||||||||||||||||||||||||||| |||||||||| | |||||||||| | Sbjct: 142485 gataaaagttactctagggataacaggctgatctcccccaagagttcgcatcgacgggga 142426 Query: 465 ggtttggcacctcgatgtcggctc 488 |||||||||||||||||||||||| Sbjct: 142425 ggtttggcacctcgatgtcggctc 142402 Score = 73.8 bits (37), Expect = 5e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctt 49 ||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 193894 gtgaagatgcggactacctataccaggacagaaagaccctatgaagctt 193942 Score = 73.8 bits (37), Expect = 5e-10 Identities = 46/49 (93%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctt 49 ||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 142888 gtgaagatgcggactacctataccaggacagaaagaccctatgaagctt 142840 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 130 cgagccatcagtgagataccactctg 155 |||||||||||||||| ||||||||| Sbjct: 194023 cgagccatcagtgagagaccactctg 194048 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 130 cgagccatcagtgagataccactctg 155 |||||||||||||||| ||||||||| Sbjct: 142759 cgagccatcagtgagagaccactctg 142734
>gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3978 Score = 278 bits (140), Expect = 2e-71 Identities = 179/192 (93%) Strand = Plus / Plus Query: 297 gagtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagt 356 ||||| ||||||| ||||||||||||||||||||| || ||||||||| | |||||| Sbjct: 2421 gagtgtaaaggcaaaagggagcttgactgcaagacctacaagtcgagcaggggcgaaagc 2480 Query: 357 cggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttac 416 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 2481 cggccttagtgatccgacggtaccgcgtggaagggccgtcgctcaacggataaaagttac 2540 Query: 417 tctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacct 476 ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| Sbjct: 2541 tctagggataacaggcttatcttccccaagagttcacatcgacgggaaggtttggcacct 2600 Query: 477 cgatgtcggctc 488 |||||||||||| Sbjct: 2601 cgatgtcggctc 2612 Score = 117 bits (59), Expect = 4e-23 Identities = 92/103 (89%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||| Sbjct: 2124 gtgaagatgcggactaccagcacctggacagaaagaccctatgaagcttgactgtatcct 2183 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggc 103 || ||||| || |||| |||| |||||||| ||||||| |||| Sbjct: 2184 ggaattgggttcgggcttttcttgcgcagcctaggtgggaggc 2226 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 200 gacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcgt 259 |||||| |||||| | |||||| | ||||||| | |||||| ||| ||||||||||| || Sbjct: 2322 gacagtttcaggtgggcagtttatctggggcggatgcctcctaaagggtaacggaggtgt 2381 Query: 260 gcaaaggtttcctc 273 ||||||||| |||| Sbjct: 2382 gcaaaggttccctc 2395
>gb|L42837.1|CMKCPRGOL Chamaetrichon capsulatum large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2610 Score = 278 bits (140), Expect = 2e-71 Identities = 233/264 (88%) Strand = Plus / Plus Query: 225 tggggcgtaggcctcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccagacgg 284 ||||||| | |||| | ||||||||||||||| ||||||||||| |||| ||| ||||| Sbjct: 2238 tggggcggatgcctgctaaaaggtaacggaggtgtgcaaaggttccctcaggctggacgg 2297 Query: 285 acattggtcctcgagtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagc 344 | || | | ||||| ||||| ||||||||||||||||||||||| || ||||||| Sbjct: 2298 aaatcagctgtagagtgtaaaggtagaagggagcttgactgcaagacctacaagtcgagc 2357 Query: 345 agagacgaaagtcggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacg 404 || | |||||| ||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 2358 aggggcgaaagccggccttagtgatccgacggtaccaagtggaagggccgtcgctcaacg 2417 Query: 405 gataaaagttactctagggataacaggctgatcttccccaagagtccacatcgacgggaa 464 |||||||||||||||||||||||||||||||||| |||||||||| | |||||||||| | Sbjct: 2418 gataaaagttactctagggataacaggctgatctcccccaagagttcgcatcgacgggga 2477 Query: 465 ggtttggcacctcgatgtcggctc 488 |||||||||||||||||||||||| Sbjct: 2478 ggtttggcacctcgatgtcggctc 2501 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctt 49 ||||||||||||||||| | ||| |||||||||||||||||||||||| Sbjct: 2015 gtgaagatgcggactacttataccaggacagaaagaccctatgaagctt 2063 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 131 gagccatcagtgagataccactctggaagagct 163 ||||||||||||||| |||||||| ||||||| Sbjct: 2145 gagccatcagtgagagaccactctaaaagagct 2177
>gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2864 Score = 278 bits (140), Expect = 2e-71 Identities = 179/192 (93%) Strand = Plus / Plus Query: 297 gagtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagt 356 ||||||||| ||| ||| ||||||||||||||||| || ||||||||| |||||||| Sbjct: 2567 gagtgcaaaagcataagagagcttgactgcaagacctacaagtcgagcaggtacgaaagt 2626 Query: 357 cggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttac 416 ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 2627 aggctttagtgatccgacggtgccgagtggaagggccgtcgctcaacggacaaaagttac 2686 Query: 417 tctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacct 476 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 2687 tctagggataacaggctgatcttccccaagagttcacatcgacgggaaggtttggcacct 2746 Query: 477 cgatgtcggctc 488 |||||||||||| Sbjct: 2747 cgatgtcggctc 2758 Score = 101 bits (51), Expect = 2e-18 Identities = 90/103 (87%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 |||||||||||||||||||| ||| |||||||||||||||||||||||| ||||| ||| Sbjct: 2274 gtgaagatgcggactacctgtacccggacagaaagaccctatgaagcttgactgtatcct 2333 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggc 103 || || || ||||||| ||| |||||||| ||||||| |||| Sbjct: 2334 ggaatagggtttgggctcttcttgcgcagcctaggtgggaggc 2376 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 131 gagccatcagtgagataccactctggaagagct 163 ||||||||| ||||| ||||||||||||||||| Sbjct: 2404 gagccatcattgagagaccactctggaagagct 2436 Score = 44.1 bits (22), Expect = 0.42 Identities = 52/62 (83%) Strand = Plus / Plus Query: 207 tcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcgtgcaaagg 266 |||||| | |||||| | ||||||| | ||||| |||| ||||| |||||||||||||| Sbjct: 2477 tcaggtgggcagtttatctggggcggatgcctcataaaaagtaactgaggcgtgcaaagg 2536 Query: 267 tt 268 || Sbjct: 2537 tt 2538
>emb|X68897.1|CHCIRRNX5 Chloroplast Chlamydomonas indica rrnL gene, exon 5 Length = 675 Score = 278 bits (140), Expect = 2e-71 Identities = 179/192 (93%) Strand = Plus / Plus Query: 296 cgagtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaag 355 |||||| ||||||| ||| ||||||||||| ||||| || ||||||||| | |||||| Sbjct: 399 cgagtgtaaaggcaaaagagagcttgactgtaagaccaacaagtcgagcaggggcgaaag 458 Query: 356 tcggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagtta 415 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 459 ccggccttagtgatccgacggtgccgtgtggaagggccgtcgctcaacggataaaagtta 518 Query: 416 ctctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacc 475 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 519 ctctagggataacaggctgatcttccccaagagtccatatcgacgggaaggtttggcacc 578 Query: 476 tcgatgtcggct 487 |||||||||||| Sbjct: 579 tcgatgtcggct 590 Score = 101 bits (51), Expect = 2e-18 Identities = 90/103 (87%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||| | | Sbjct: 105 gtgaagatgcggactacctacacttggacagaaagaccctatgaagcttgactgtatctt 164 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggc 103 || ||||| || |||| |||| |||||||| ||||||| |||| Sbjct: 165 ggaattgggttcgggcttttcttgcgcagcctaggtgggaggc 207 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 131 gagccatcagtgagataccactctggaagagct 163 ||||||||||||||| ||||||||||||||||| Sbjct: 235 gagccatcagtgagagaccactctggaagagct 267
>emb|Z17234.1|CHCERRNL Chloroplast Chlamydomonas eugametos rrnL gene Length = 8146 Score = 278 bits (140), Expect = 2e-71 Identities = 179/192 (93%) Strand = Plus / Plus Query: 296 cgagtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaag 355 |||||| ||||||| ||| ||||||||||| ||||| || ||||||||| | |||||| Sbjct: 6286 cgagtgtaaaggcaaaagagagcttgactgtaagaccaacaagtcgagcaggggcgaaag 6345 Query: 356 tcggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagtta 415 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 6346 ccggccttagtgatccgacggtgccgtgtggaagggccgtcgctcaacggataaaagtta 6405 Query: 416 ctctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacc 475 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 6406 ctctagggataacaggctgatcttccccaagagtccatatcgacgggaaggtttggcacc 6465 Query: 476 tcgatgtcggct 487 |||||||||||| Sbjct: 6466 tcgatgtcggct 6477 Score = 101 bits (51), Expect = 2e-18 Identities = 90/103 (87%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||| | | Sbjct: 5992 gtgaagatgcggactacctacacttggacagaaagaccctatgaagcttgactgtatctt 6051 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggc 103 || ||||| || |||| |||| |||||||| ||||||| |||| Sbjct: 6052 ggaattgggttcgggcttttcttgcgcagcctaggtgggaggc 6094 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 131 gagccatcagtgagataccactctggaagagct 163 ||||||||||||||| ||||||||||||||||| Sbjct: 6122 gagccatcagtgagagaccactctggaagagct 6154
>gb|AY584517.1| Gloeobacter violaceus strain PCC 7421 23S ribosomal RNA gene, partial sequence Length = 2340 Score = 276 bits (139), Expect = 6e-71 Identities = 178/191 (93%) Strand = Plus / Plus Query: 298 agtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtc 357 |||| ||||||| |||||||||||||||| |||| || |||||||||||||||||||| Sbjct: 1820 agtgtaaaggcataagggagcttgactgcgagacctacaagtcgagcagagacgaaagtc 1879 Query: 358 ggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttact 417 |||||||||||||||||||| | | |||||||||||||||||||||||||||||||||| Sbjct: 1880 ggccttagtgatccgacggttctgcatggaagggccgtcgctcaacggataaaagttact 1939 Query: 418 ctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctc 477 ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 1940 ctagggataacaggctgatctcccccaagagtccacatcgacggggaggtttggcacctc 1999 Query: 478 gatgtcggctc 488 ||||||||||| Sbjct: 2000 gatgtcggctc 2010 Score = 73.8 bits (37), Expect = 5e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttact 53 |||||||| |||||||| || ||| |||||||||||||||||||||||||||| Sbjct: 1541 gtgaagatacggactacttgtacccggacagaaagaccctatgaagctttact 1593 Score = 48.1 bits (24), Expect = 0.027 Identities = 63/76 (82%) Strand = Plus / Plus Query: 198 gggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggc 257 |||||||| |||||| | |||||| ||||||| |||||| ||| |||||||||||| Sbjct: 1720 gggacagtttcaggtgggcagtttgactggggcggtcgcctcctaaacggtaacggaggc 1779 Query: 258 gtgcaaaggtttcctc 273 | ||||||||| |||| Sbjct: 1780 gcgcaaaggttccctc 1795 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Plus Query: 140 gtgagataccactctggaagagctcggattctaacct 176 |||||||||||||||| || ||| |||||||||||| Sbjct: 1680 gtgagataccactctgacagggctaggattctaacct 1716
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 276 bits (139), Expect = 6e-71 Identities = 208/231 (90%) Strand = Plus / Plus Query: 247 gtaacggaggcgtgcaaaggtttcctcgggccagacggacattggtcctcgagtgcaaag 306 |||||||||||||||||||||| ||| | | |||||| || | | | ||||| |||| Sbjct: 5567 gtaacggaggcgtgcaaaggttctctcagtctggacggaaatcagacattgagtgtaaag 5626 Query: 307 gcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggccttagt 366 ||| ||| ||||||||||||||||| || ||||||||| | |||||| |||||||||| Sbjct: 5627 gcaaaagagagcttgactgcaagacctacaagtcgagcaggggcgaaagccggccttagt 5686 Query: 367 gatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactctagggata 426 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5687 gatccgacggtgccgtgtggaagggccgtcgctcaacggataaaagttactctagggata 5746 Query: 427 acaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctc 477 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5747 acaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctc 5797 Score = 123 bits (62), Expect = 6e-25 Identities = 136/163 (83%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 60 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 3817 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttgactgtatcct 3876 Query: 61 gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 120 | ||||| || |||| |||| |||||||| ||||||| |||| | ||||| | ||||| Sbjct: 3877 gtaattgggttcgggcttttcttgcgcagcctaggtgggaggctatgaaggttctcttcc 3936 Query: 121 nnnnnnncccgagccatcagtgagataccactctggaagagct 163 | ||||||||| ||||| ||||||||||||||||| Sbjct: 3937 gggagaactagagccatcattgagagaccactctggaagagct 3979
>emb|AJ245645.1|PWI245645 Prototheca wickerhamii chloroplast partial genome Length = 22085 Score = 274 bits (138), Expect = 3e-70 Identities = 174/186 (93%) Strand = Plus / Plus Query: 303 aaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggcct 362 ||||||||||||||||||||||| ||||| || ||| | ||| | |||||| |||||| Sbjct: 8072 aaaggcagaagggagcttgactgtaagacctacaagtcaaacaggggcgaaagccggcct 8131 Query: 363 tagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactctagg 422 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 8132 tagtgatccgacggtgccgagtggaagggccgtcgctaaacggataaaagttactctagg 8191 Query: 423 gataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgatgt 482 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 8192 gataacaggctgatcttccccaagagttcacatcgacgggaaggtttggcacctcgatgt 8251 Query: 483 cggctc 488 |||||| Sbjct: 8252 cggctc 8257 Score = 101 bits (51), Expect = 2e-18 Identities = 54/55 (98%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgt 55 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 7771 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttgactgt 7825
>gb|L42851.1|PTOCPRGOL Prototheca wickerhamii large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2715 Score = 274 bits (138), Expect = 3e-70 Identities = 174/186 (93%) Strand = Plus / Plus Query: 303 aaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaagtcggcct 362 ||||||||||||||||||||||| ||||| || ||| | ||| | |||||| |||||| Sbjct: 2424 aaaggcagaagggagcttgactgtaagacctacaagtcaaacaggggcgaaagccggcct 2483 Query: 363 tagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactctagg 422 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 2484 tagtgatccgacggtgccgagtggaagggccgtcgctaaacggataaaagttactctagg 2543 Query: 423 gataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgatgt 482 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 2544 gataacaggctgatcttccccaagagttcacatcgacgggaaggtttggcacctcgatgt 2603 Query: 483 cggctc 488 |||||| Sbjct: 2604 cggctc 2609 Score = 101 bits (51), Expect = 2e-18 Identities = 54/55 (98%) Strand = Plus / Plus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgt 55 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 2123 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttgactgt 2177
>emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segment 6/7 Length = 349122 Score = 272 bits (137), Expect = 1e-69 Identities = 179/193 (92%) Strand = Plus / Minus Query: 296 cgagtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaag 355 |||||||||| ||||||||||||||||||| |||| ||| ||||| ||| |||||||| Sbjct: 337763 cgagtgcaaaagcagaagggagcttgactgtgagacccacaagtcgaacagggacgaaag 337704 Query: 356 tcggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagtta 415 ||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 337703 tcggctttagtgatccgacggttctgagtggaagggccgtcgctcaacggataaaagtta 337644 Query: 416 ctctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacc 475 ||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||||| Sbjct: 337643 ctctagggataacaggctgatctcccccaagagttcacatcgacggggaggtttggcacc 337584 Query: 476 tcgatgtcggctc 488 ||||||||||||| Sbjct: 337583 tcgatgtcggctc 337571 Score = 272 bits (137), Expect = 1e-69 Identities = 179/193 (92%) Strand = Plus / Minus Query: 296 cgagtgcaaaggcagaagggagcttgactgcaagactcacccgtcgagcagagacgaaag 355 |||||||||| ||||||||||||||||||| |||| ||| ||||| ||| |||||||| Sbjct: 130822 cgagtgcaaaagcagaagggagcttgactgtgagacccacaagtcgaacagggacgaaag 130763 Query: 356 tcggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagtta 415 ||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 130762 tcggctttagtgatccgacggttctgagtggaagggccgtcgctcaacggataaaagtta 130703 Query: 416 ctctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacc 475 ||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||||| Sbjct: 130702 ctctagggataacaggctgatctcccccaagagttcacatcgacggggaggtttggcacc 130643 Query: 476 tcgatgtcggctc 488 ||||||||||||| Sbjct: 130642 tcgatgtcggctc 130630 Score = 93.7 bits (47), Expect = 5e-16 Identities = 53/55 (96%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgt 55 ||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 338056 gtgaagatgcggactacgtacacctggacagaaagaccctatgaagctttactgt 338002 Score = 93.7 bits (47), Expect = 5e-16 Identities = 53/55 (96%) Strand = Plus / Minus Query: 1 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgt 55 ||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 131115 gtgaagatgcggactacgtacacctggacagaaagaccctatgaagctttactgt 131061 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 235 gcctcccaaaaggtaacggaggcgtgcaaaggtttcctc 273 |||||| ||||||||||||||||| ||||||||| |||| Sbjct: 337824 gcctcctaaaaggtaacggaggcgcgcaaaggttccctc 337786 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 235 gcctcccaaaaggtaacggaggcgtgcaaaggtttcctc 273 |||||| ||||||||||||||||| ||||||||| |||| Sbjct: 130883 gcctcctaaaaggtaacggaggcgcgcaaaggttccctc 130845 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,655,724 Number of Sequences: 3902068 Number of extensions: 3655724 Number of successful extensions: 91169 Number of sequences better than 10.0: 3099 Number of HSP's better than 10.0 without gapping: 3040 Number of HSP's successfully gapped in prelim test: 88 Number of HSP's that attempted gapping in prelim test: 78610 Number of HSP's gapped (non-prelim): 10814 length of query: 489 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 467 effective length of database: 17,147,199,772 effective search space: 8007742293524 effective search space used: 8007742293524 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
