ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags4i12 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X67960.1|HVGRP94HO H.vulgare mRNA for GRP94 homologue Length = 2682 Score = 1039 bits (524), Expect = 0.0 Identities = 532/536 (99%) Strand = Plus / Plus Query: 1 gatgggtattgttgactcagacacattgcccctcaatgtatcccgagaaatgcttcaaca 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1361 gatgggtattgttgactcagacacattgcccctcaatgtatcccgagaaatgcttcaaca 1420 Query: 61 acatagcagtctgaagaccatcaagaagaaactgatccgcaaggctcttgacatgattag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1421 acatagcagtctgaagaccatcaagaagaaactgatccgcaaggctcttgacatgattag 1480 Query: 121 gaaacttgctgaggaggatcctgatgagtacagcaacaaagaaaagacanntnatgaaaa 180 ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 1481 gaaacttgctgaggaggatcctgatgagtacagcaacaaagaaaagacagatgatgaaaa 1540 Query: 181 gagtgcaatggaggagaagaagggccagnatgccaagttctggaacgagtttggcaaatc 240 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1541 gagtgcaatggaggagaagaagggccagtatgccaagttctggaacgagtttggcaaatc 1600 Query: 241 agtcaagctgggaatcattgaagatgcaacaaacaggaaccgtcttgcaaagcttctgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1601 agtcaagctgggaatcattgaagatgcaacaaacaggaaccgtcttgcaaagcttctgag 1660 Query: 301 attcgagagttccaagtcagatggcaaacttgtctcccttgatgagtatatttcaaggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1661 attcgagagttccaagtcagatggcaaacttgtctcccttgatgagtatatttcaaggat 1720 Query: 361 gaaatcagggcagaaggacatcttctaccttacaggaagcagcaaggaacagctagagaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1721 gaaatcagggcagaaggacatcttctaccttacaggaagcagcaaggaacagctagagaa 1780 Query: 421 atctccattccttgagcagctaaccaagaaaaactacgaggttatctacttcaccgaccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1781 atctccattccttgagcagctaaccaagaaaaactacgaggttatctacttcaccgaccc 1840 Query: 481 cgtggatgagtacctgatgcaatacctcatggactacgaggacaagaagttccaga 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1841 cgtggatgagtacctgatgcaatacctcatggactacgaggacaagaagttccaga 1896
>dbj|AK102478.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094I10, full insert sequence Length = 2708 Score = 656 bits (331), Expect = 0.0 Identities = 474/523 (90%) Strand = Plus / Plus Query: 14 gactcagacacattgcccctcaatgtatcccgagaaatgcttcaacaacatagcagtctg 73 ||||| ||||||||||| ||||||||||| ||||||||||| |||||||||||||| ||| Sbjct: 1419 gactcggacacattgcctctcaatgtatcacgagaaatgctccaacaacatagcagcctg 1478 Query: 74 aagaccatcaagaagaaactgatccgcaaggctcttgacatgattaggaaacttgctgag 133 |||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||| Sbjct: 1479 aagaccatcaagaagaaactaatccgcaaagctcttgacatgattagaaaacttgctgag 1538 Query: 134 gaggatcctgatgagtacagcaacaaagaaaagacanntnatgaaaagagtgcaatggag 193 || |||||||||||||||||||||||||| |||||| | | ||||| |||||||||||| Sbjct: 1539 gaagatcctgatgagtacagcaacaaagataagacagatgaagaaaaaagtgcaatggag 1598 Query: 194 gagaagaagggccagnatgccaagttctggaacgagtttggcaaatcagtcaagctggga 253 ||||| ||||||||| |||||||||||||||| |||||||| |||||||||||| |||| Sbjct: 1599 gagaaaaagggccagtatgccaagttctggaatgagtttggaaaatcagtcaagttgggc 1658 Query: 254 atcattgaagatgcaacaaacaggaaccgtcttgcaaagcttctgagattcgagagttcc 313 ||||||||||| ||||| |||||||||||||||||||||||||||||||| || ||| || Sbjct: 1659 atcattgaagacgcaactaacaggaaccgtcttgcaaagcttctgagatttgaaagtacc 1718 Query: 314 aagtcagatggcaaacttgtctcccttgatgagtatatttcaaggatgaaatcagggcag 373 ||||| || |||||||||| ||| ||||||||||| |||||||||||||| |||||||| Sbjct: 1719 aagtcggaaggcaaacttgcctctcttgatgagtacatttcaaggatgaagccagggcag 1778 Query: 374 aaggacatcttctaccttacaggaagcagcaaggaacagctagagaaatctccattcctt 433 ||||||||||| ||| |||| ||||||||||||||||| |||||||||| || |||||| Sbjct: 1779 aaggacatcttttacattaccggaagcagcaaggaacaattagagaaatcaccgttcctt 1838 Query: 434 gagcagctaaccaagaaaaactacgaggttatctacttcaccgaccccgtggatgagtac 493 ||| ||||||||| || ||||||||||||||||||||||| ||||| || || |||||| Sbjct: 1839 gagaggctaaccaaaaagaactacgaggttatctacttcactgaccctgttgacgagtac 1898 Query: 494 ctgatgcaatacctcatggactacgaggacaagaagttccaga 536 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1899 ttgatgcaatacctcatggactacgaggacaagaagttccaga 1941
>dbj|AK062023.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-G02, full insert sequence Length = 2026 Score = 656 bits (331), Expect = 0.0 Identities = 474/523 (90%) Strand = Plus / Plus Query: 14 gactcagacacattgcccctcaatgtatcccgagaaatgcttcaacaacatagcagtctg 73 ||||| ||||||||||| ||||||||||| ||||||||||| |||||||||||||| ||| Sbjct: 741 gactcggacacattgcctctcaatgtatcacgagaaatgctccaacaacatagcagcctg 800 Query: 74 aagaccatcaagaagaaactgatccgcaaggctcttgacatgattaggaaacttgctgag 133 |||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||| Sbjct: 801 aagaccatcaagaagaaactaatccgcaaagctcttgacatgattagaaaacttgctgag 860 Query: 134 gaggatcctgatgagtacagcaacaaagaaaagacanntnatgaaaagagtgcaatggag 193 || |||||||||||||||||||||||||| |||||| | | ||||| |||||||||||| Sbjct: 861 gaagatcctgatgagtacagcaacaaagataagacagatgaagaaaaaagtgcaatggag 920 Query: 194 gagaagaagggccagnatgccaagttctggaacgagtttggcaaatcagtcaagctggga 253 ||||| ||||||||| |||||||||||||||| |||||||| |||||||||||| |||| Sbjct: 921 gagaaaaagggccagtatgccaagttctggaatgagtttggaaaatcagtcaagttgggc 980 Query: 254 atcattgaagatgcaacaaacaggaaccgtcttgcaaagcttctgagattcgagagttcc 313 ||||||||||| ||||| |||||||||||||||||||||||||||||||| || ||| || Sbjct: 981 atcattgaagacgcaactaacaggaaccgtcttgcaaagcttctgagatttgaaagtacc 1040 Query: 314 aagtcagatggcaaacttgtctcccttgatgagtatatttcaaggatgaaatcagggcag 373 ||||| || |||||||||| ||| ||||||||||| |||||||||||||| |||||||| Sbjct: 1041 aagtcggaaggcaaacttgcctctcttgatgagtacatttcaaggatgaagccagggcag 1100 Query: 374 aaggacatcttctaccttacaggaagcagcaaggaacagctagagaaatctccattcctt 433 ||||||||||| ||| |||| ||||||||||||||||| |||||||||| || |||||| Sbjct: 1101 aaggacatcttttacattaccggaagcagcaaggaacaattagagaaatcaccgttcctt 1160 Query: 434 gagcagctaaccaagaaaaactacgaggttatctacttcaccgaccccgtggatgagtac 493 ||| ||||||||| || ||||||||||||||||||||||| ||||| || || |||||| Sbjct: 1161 gagaggctaaccaaaaagaactacgaggttatctacttcactgaccctgttgacgagtac 1220 Query: 494 ctgatgcaatacctcatggactacgaggacaagaagttccaga 536 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1221 ttgatgcaatacctcatggactacgaggacaagaagttccaga 1263
>dbj|AB037681.1| Oryza sativa HSP90 mRNA for heat shock protein 90, complete cds Length = 2731 Score = 648 bits (327), Expect = 0.0 Identities = 473/523 (90%) Strand = Plus / Plus Query: 14 gactcagacacattgcccctcaatgtatcccgagaaatgcttcaacaacatagcagtctg 73 ||||| ||||||||||| ||||||||||| ||||||||||| ||||||||||| || ||| Sbjct: 1413 gactcggacacattgcctctcaatgtatcacgagaaatgctccaacaacatagtagcctg 1472 Query: 74 aagaccatcaagaagaaactgatccgcaaggctcttgacatgattaggaaacttgctgag 133 |||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||| Sbjct: 1473 aagaccatcaagaagaaactaatccgcaaagctcttgacatgattagaaaacttgctgag 1532 Query: 134 gaggatcctgatgagtacagcaacaaagaaaagacanntnatgaaaagagtgcaatggag 193 || |||||||||||||||||||||||||| |||||| | | ||||| |||||||||||| Sbjct: 1533 gaagatcctgatgagtacagcaacaaagataagacagatgaagaaaaaagtgcaatggag 1592 Query: 194 gagaagaagggccagnatgccaagttctggaacgagtttggcaaatcagtcaagctggga 253 ||||| ||||||||| |||||||||||||||| |||||||| |||||||||||| |||| Sbjct: 1593 gagaaaaagggccagtatgccaagttctggaatgagtttggaaaatcagtcaagttgggc 1652 Query: 254 atcattgaagatgcaacaaacaggaaccgtcttgcaaagcttctgagattcgagagttcc 313 ||||||||||| ||||| |||||||||||||||||||||||||||||||| || ||| || Sbjct: 1653 atcattgaagacgcaactaacaggaaccgtcttgcaaagcttctgagatttgaaagtacc 1712 Query: 314 aagtcagatggcaaacttgtctcccttgatgagtatatttcaaggatgaaatcagggcag 373 ||||| || |||||||||| ||| ||||||||||| |||||||||||||| |||||||| Sbjct: 1713 aagtcggaaggcaaacttgcctctcttgatgagtacatttcaaggatgaagccagggcag 1772 Query: 374 aaggacatcttctaccttacaggaagcagcaaggaacagctagagaaatctccattcctt 433 ||||||||||| ||| |||| ||||||||||||||||| |||||||||| || |||||| Sbjct: 1773 aaggacatcttttacattaccggaagcagcaaggaacaattagagaaatcaccgttcctt 1832 Query: 434 gagcagctaaccaagaaaaactacgaggttatctacttcaccgaccccgtggatgagtac 493 ||| ||||||||| || ||||||||||||||||||||||| ||||| || || |||||| Sbjct: 1833 gagaggctaaccaaaaagaactacgaggttatctacttcactgaccctgttgacgagtac 1892 Query: 494 ctgatgcaatacctcatggactacgaggacaagaagttccaga 536 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1893 ttgatgcaatacctcatggactacgaggacaagaagttccaga 1935
>gb|BT024056.1| Zea mays clone EL01N0440A11 mRNA sequence Length = 2511 Score = 557 bits (281), Expect = e-155 Identities = 469/533 (87%) Strand = Plus / Plus Query: 4 gggtattgttgactcagacacattgcccctcaatgtatcccgagaaatgcttcaacaaca 63 |||||||||||||||||||||| |||| || ||||| || ||||||||||| || ||||| Sbjct: 1165 gggtattgttgactcagacacactgccgctgaatgtgtcacgagaaatgctccagcaaca 1224 Query: 64 tagcagtctgaagaccatcaagaagaaactgatccgcaaggctcttgacatgattaggaa 123 || |||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 1225 taacagtctgaagactatcaagaagaagctgatccgcaaagctcttgacatgattaggaa 1284 Query: 124 acttgctgaggaggatcctgatgagtacagcaacaaagaaaagacanntnatgaaaagag 183 ||||||||| || || |||||||||||||||||||| || |||||| | | || || | Sbjct: 1285 acttgctgaagaagaccctgatgagtacagcaacaaggataagacagatgaagagaaaaa 1344 Query: 184 tgcaatggaggagaagaagggccagnatgccaagttctggaacgagtttggcaaatcagt 243 || ||||||||||||||||||||| | |||||||||||||| ||||||||||||||| | Sbjct: 1345 tgagatggaggagaagaagggccagtacgccaagttctggaatgagtttggcaaatcaat 1404 Query: 244 caagctgggaatcattgaagatgcaacaaacaggaaccgtcttgcaaagcttctgagatt 303 ||||||||| ||||||||||| ||||| ||||||||||| ||||| |||||||| ||||| Sbjct: 1405 caagctgggtatcattgaagacgcaactaacaggaaccgccttgcgaagcttcttagatt 1464 Query: 304 cgagagttccaagtcagatggcaaacttgtctcccttgatgagtatatttcaaggatgaa 363 || ||| ||||||| ||||||||||||| ||||||||| ||||| |||||||||||||| Sbjct: 1465 tgaaagtaccaagtcggatggcaaacttgcctcccttgacgagtacatttcaaggatgaa 1524 Query: 364 atcagggcagaaggacatcttctaccttacaggaagcagcaaggaacagctagagaaatc 423 |||||||||| |||||||||||||| || ||||||||||| || ||||| ||||| || Sbjct: 1525 gccagggcagaaagacatcttctacctcacgggaagcagcaaagagcagctggagaagtc 1584 Query: 424 tccattccttgagcagctaaccaagaaaaactacgaggttatctacttcaccgaccccgt 483 ||| ||||| ||| |||||||||||| ||||||||||| |||| |||||||||||| | Sbjct: 1585 tccgttcctcgagaggctaaccaagaagaactacgaggtcatcttcttcaccgaccctat 1644 Query: 484 ggatgagtacctgatgcaatacctcatggactacgaggacaagaagttccaga 536 ||| |||||||||||||| ||||| |||||||||||||||| ||||||||||| Sbjct: 1645 ggacgagtacctgatgcagtacctgatggactacgaggacaggaagttccaga 1697
>gb|BT018707.1| Zea mays clone EL01N0516A06.d mRNA sequence Length = 1546 Score = 549 bits (277), Expect = e-153 Identities = 468/533 (87%) Strand = Plus / Plus Query: 4 gggtattgttgactcagacacattgcccctcaatgtatcccgagaaatgcttcaacaaca 63 ||||||||||||||| ||||| ||||||| || || || |||||||||||||||||||| Sbjct: 239 gggtattgttgactcggacacgctgcccctgaacgtgtcacgagaaatgcttcaacaaca 298 Query: 64 tagcagtctgaagaccatcaagaagaaactgatccgcaaggctcttgacatgattaggaa 123 ||||||||| ||||||||||||||||| ||||||||||| || ||||||||||| ||||| Sbjct: 299 tagcagtctcaagaccatcaagaagaagctgatccgcaaagcccttgacatgatcaggaa 358 Query: 124 acttgctgaggaggatcctgatgagtacagcaacaaagaaaagacanntnatgaaaagag 183 ||||||||| || || |||||||||||||||||||| || |||||| | | || || || Sbjct: 359 acttgctgaagaagaccctgatgagtacagcaacaaggataagacagatgaagagaaaag 418 Query: 184 tgcaatggaggagaagaagggccagnatgccaagttctggaacgagtttggcaaatcagt 243 | ||||||||||||||||||||| | |||||||||||||| ||||||||||||||| | Sbjct: 419 cgagatggaggagaagaagggccagtacgccaagttctggaatgagtttggcaaatcaat 478 Query: 244 caagctgggaatcattgaagatgcaacaaacaggaaccgtcttgcaaagcttctgagatt 303 ||||||||| ||||| ||||| || || ||||| ||||| ||||| |||||||| ||||| Sbjct: 479 caagctgggtatcatcgaagacgcgactaacagaaaccgccttgcgaagcttcttagatt 538 Query: 304 cgagagttccaagtcagatggcaaacttgtctcccttgatgagtatatttcaaggatgaa 363 |||||| ||||||| ||||||||||||| ||||||||| ||||| || ||| ||||||| Sbjct: 539 tgagagtaccaagtcggatggcaaacttgcctcccttgacgagtacatctcacggatgaa 598 Query: 364 atcagggcagaaggacatcttctaccttacaggaagcagcaaggaacagctagagaaatc 423 ||||||||||| |||||||||||| | || ||||||||||| || ||||| ||||| || Sbjct: 599 gtcagggcagaaagacatcttctacatcacgggaagcagcaaagagcagctggagaagtc 658 Query: 424 tccattccttgagcagctaaccaagaaaaactacgaggttatctacttcaccgaccccgt 483 ||||||||| ||| |||||||||||| ||||||||||| |||| ||||||||||||||| Sbjct: 659 tccattcctcgagaggctaaccaagaagaactacgaggtcatcttcttcaccgaccccgt 718 Query: 484 ggatgagtacctgatgcaatacctcatggactacgaggacaagaagttccaga 536 ||| |||||||||||||| ||||| |||||||||||||||||||||||||||| Sbjct: 719 ggacgagtacctgatgcagtacctgatggactacgaggacaagaagttccaga 771
>gb|BT018144.1| Zea mays clone EL01N0555C04.c mRNA sequence Length = 1544 Score = 549 bits (277), Expect = e-153 Identities = 468/533 (87%) Strand = Plus / Plus Query: 4 gggtattgttgactcagacacattgcccctcaatgtatcccgagaaatgcttcaacaaca 63 ||||||||||||||| ||||| ||||||| || || || |||||||||||||||||||| Sbjct: 225 gggtattgttgactcggacacgctgcccctgaacgtgtcacgagaaatgcttcaacaaca 284 Query: 64 tagcagtctgaagaccatcaagaagaaactgatccgcaaggctcttgacatgattaggaa 123 ||||||||| ||||||||||||||||| ||||||||||| || ||||||||||| ||||| Sbjct: 285 tagcagtctcaagaccatcaagaagaagctgatccgcaaagcccttgacatgatcaggaa 344 Query: 124 acttgctgaggaggatcctgatgagtacagcaacaaagaaaagacanntnatgaaaagag 183 ||||||||| || || |||||||||||||||||||| || |||||| | | || || || Sbjct: 345 acttgctgaagaagaccctgatgagtacagcaacaaggataagacagatgaagagaaaag 404 Query: 184 tgcaatggaggagaagaagggccagnatgccaagttctggaacgagtttggcaaatcagt 243 | ||||||||||||||||||||| | |||||||||||||| ||||||||||||||| | Sbjct: 405 cgagatggaggagaagaagggccagtacgccaagttctggaatgagtttggcaaatcaat 464 Query: 244 caagctgggaatcattgaagatgcaacaaacaggaaccgtcttgcaaagcttctgagatt 303 ||||||||| ||||| ||||| || || ||||| ||||| ||||| |||||||| ||||| Sbjct: 465 caagctgggtatcatcgaagacgcgactaacagaaaccgccttgcgaagcttcttagatt 524 Query: 304 cgagagttccaagtcagatggcaaacttgtctcccttgatgagtatatttcaaggatgaa 363 |||||| ||||||| ||||||||||||| ||||||||| ||||| || ||| ||||||| Sbjct: 525 tgagagtaccaagtcggatggcaaacttgcctcccttgacgagtacatctcacggatgaa 584 Query: 364 atcagggcagaaggacatcttctaccttacaggaagcagcaaggaacagctagagaaatc 423 ||||||||||| |||||||||||| | || ||||||||||| || ||||| ||||| || Sbjct: 585 gtcagggcagaaagacatcttctacatcacgggaagcagcaaagagcagctggagaagtc 644 Query: 424 tccattccttgagcagctaaccaagaaaaactacgaggttatctacttcaccgaccccgt 483 ||||||||| ||| |||||||||||| ||||||||||| |||| ||||||||||||||| Sbjct: 645 tccattcctcgagaggctaaccaagaagaactacgaggtcatcttcttcaccgaccccgt 704 Query: 484 ggatgagtacctgatgcaatacctcatggactacgaggacaagaagttccaga 536 ||| |||||||||||||| ||||| |||||||||||||||||||||||||||| Sbjct: 705 ggacgagtacctgatgcagtacctgatggactacgaggacaagaagttccaga 757
>gb|AY103537.1| Zea mays PCO098403 mRNA sequence Length = 2806 Score = 549 bits (277), Expect = e-153 Identities = 468/533 (87%) Strand = Plus / Plus Query: 4 gggtattgttgactcagacacattgcccctcaatgtatcccgagaaatgcttcaacaaca 63 ||||||||||||||| ||||| ||||||| || || || |||||||||||||||||||| Sbjct: 1395 gggtattgttgactcggacacgctgcccctgaacgtgtcacgagaaatgcttcaacaaca 1454 Query: 64 tagcagtctgaagaccatcaagaagaaactgatccgcaaggctcttgacatgattaggaa 123 ||||||||| ||||||||||||||||| ||||||||||| || ||||||||||| ||||| Sbjct: 1455 tagcagtctcaagaccatcaagaagaagctgatccgcaaagcccttgacatgatcaggaa 1514 Query: 124 acttgctgaggaggatcctgatgagtacagcaacaaagaaaagacanntnatgaaaagag 183 ||||||||| || || |||||||||||||||||||| || |||||| | | || || || Sbjct: 1515 acttgctgaagaagaccctgatgagtacagcaacaaggataagacagatgaagagaaaag 1574 Query: 184 tgcaatggaggagaagaagggccagnatgccaagttctggaacgagtttggcaaatcagt 243 | ||||||||||||||||||||| | |||||||||||||| ||||||||||||||| | Sbjct: 1575 cgagatggaggagaagaagggccagtacgccaagttctggaatgagtttggcaaatcaat 1634 Query: 244 caagctgggaatcattgaagatgcaacaaacaggaaccgtcttgcaaagcttctgagatt 303 ||||||||| ||||| ||||| || || ||||| ||||| ||||| |||||||| ||||| Sbjct: 1635 caagctgggtatcatcgaagacgcgactaacagaaaccgccttgcgaagcttcttagatt 1694 Query: 304 cgagagttccaagtcagatggcaaacttgtctcccttgatgagtatatttcaaggatgaa 363 |||||| ||||||| ||||||||||||| ||||||||| ||||| || ||| ||||||| Sbjct: 1695 tgagagtaccaagtcggatggcaaacttgcctcccttgacgagtacatctcacggatgaa 1754 Query: 364 atcagggcagaaggacatcttctaccttacaggaagcagcaaggaacagctagagaaatc 423 ||||||||||| |||||||||||| | || ||||||||||| || ||||| ||||| || Sbjct: 1755 gtcagggcagaaagacatcttctacatcacgggaagcagcaaagagcagctggagaagtc 1814 Query: 424 tccattccttgagcagctaaccaagaaaaactacgaggttatctacttcaccgaccccgt 483 ||||||||| ||| |||||||||||| ||||||||||| |||| ||||||||||||||| Sbjct: 1815 tccattcctcgagaggctaaccaagaagaactacgaggtcatcttcttcaccgaccccgt 1874 Query: 484 ggatgagtacctgatgcaatacctcatggactacgaggacaagaagttccaga 536 ||| |||||||||||||| ||||| |||||||||||||||||||||||||||| Sbjct: 1875 ggacgagtacctgatgcagtacctgatggactacgaggacaagaagttccaga 1927
>gb|BT016737.1| Zea mays clone Contig570 mRNA sequence Length = 808 Score = 381 bits (192), Expect = e-102 Identities = 314/356 (88%) Strand = Plus / Plus Query: 4 gggtattgttgactcagacacattgcccctcaatgtatcccgagaaatgcttcaacaaca 63 |||||||||||||||||||||| |||| || ||||| || ||||||||||| || ||||| Sbjct: 453 gggtattgttgactcagacacactgccgctgaatgtgtcacgagaaatgctccagcaaca 512 Query: 64 tagcagtctgaagaccatcaagaagaaactgatccgcaaggctcttgacatgattaggaa 123 || |||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 513 taacagtctgaagactatcaagaagaagctgatccgcaaagctcttgacatgattaggaa 572 Query: 124 acttgctgaggaggatcctgatgagtacagcaacaaagaaaagacanntnatgaaaagag 183 ||||||||| || || |||||||||||||||||||| || |||||| | | || || | Sbjct: 573 acttgctgaagaagaccctgatgagtacagcaacaaggataagacagatgaagagaaaaa 632 Query: 184 tgcaatggaggagaagaagggccagnatgccaagttctggaacgagtttggcaaatcagt 243 || ||||||||||||||||||||| | |||||||||||||| ||||||||||||||| | Sbjct: 633 tgagatggaggagaagaagggccagtacgccaagttctggaatgagtttggcaaatcaat 692 Query: 244 caagctgggaatcattgaagatgcaacaaacaggaaccgtcttgcaaagcttctgagatt 303 ||||||||| ||||||||||| ||||| ||||||||||| ||||| |||||||| ||||| Sbjct: 693 caagctgggtatcattgaagacgcaactaacaggaaccgccttgcgaagcttcttagatt 752 Query: 304 cgagagttccaagtcagatggcaaacttgtctcccttgatgagtatatttcaagga 359 || ||| ||||||| ||||||||||||| ||||||||| ||||| |||||||||| Sbjct: 753 tgaaagtaccaagtcggatggcaaacttgcctcccttgacgagtacatttcaagga 808
>dbj|AK119605.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-F01, full insert sequence Length = 1944 Score = 369 bits (186), Expect = 6e-99 Identities = 279/310 (90%) Strand = Plus / Plus Query: 227 gagtttggcaaatcagtcaagctgggaatcattgaagatgcaacaaacaggaaccgtctt 286 |||||||| |||||||||||| |||| ||||||||||| ||||| ||||||||||||||| Sbjct: 872 gagtttggaaaatcagtcaagttgggcatcattgaagacgcaactaacaggaaccgtctt 931 Query: 287 gcaaagcttctgagattcgagagttccaagtcagatggcaaacttgtctcccttgatgag 346 ||||||||||||||||| || ||| ||||||| || |||||||||| ||| ||||||||| Sbjct: 932 gcaaagcttctgagatttgaaagtaccaagtcggaaggcaaacttgcctctcttgatgag 991 Query: 347 tatatttcaaggatgaaatcagggcagaaggacatcttctaccttacaggaagcagcaag 406 || |||||||||||||| ||||||||||||||||||| ||| |||| |||||||||||| Sbjct: 992 tacatttcaaggatgaagccagggcagaaggacatcttttacattaccggaagcagcaag 1051 Query: 407 gaacagctagagaaatctccattccttgagcagctaaccaagaaaaactacgaggttatc 466 ||||| |||||||||| || ||||||||| ||||||||| || ||||||||||||||| Sbjct: 1052 gaacaattagagaaatcaccgttccttgagaggctaaccaaaaagaactacgaggttatc 1111 Query: 467 tacttcaccgaccccgtggatgagtacctgatgcaatacctcatggactacgaggacaag 526 |||||||| ||||| || || |||||| |||||||||||||||||||||||||||||||| Sbjct: 1112 tacttcactgaccctgttgacgagtacttgatgcaatacctcatggactacgaggacaag 1171 Query: 527 aagttccaga 536 |||||||||| Sbjct: 1172 aagttccaga 1181
>gb|AC091774.7| Oryza sativa chromosome 6 BAC OJ1540_H01 genomic sequence, complete sequence Length = 143507 Score = 230 bits (116), Expect = 4e-57 Identities = 146/156 (93%) Strand = Plus / Minus Query: 14 gactcagacacattgcccctcaatgtatcccgagaaatgcttcaacaacatagcagtctg 73 ||||| ||||||||||| ||||||||||| ||||||||||| |||||||||||||| ||| Sbjct: 11440 gactcggacacattgcctctcaatgtatcacgagaaatgctccaacaacatagcagcctg 11381 Query: 74 aagaccatcaagaagaaactgatccgcaaggctcttgacatgattaggaaacttgctgag 133 |||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||| Sbjct: 11380 aagaccatcaagaagaaactaatccgcaaagctcttgacatgattagaaaacttgctgag 11321 Query: 134 gaggatcctgatgagtacagcaacaaagaaaagaca 169 || |||||||||||||||||||||||||| |||||| Sbjct: 11320 gaagatcctgatgagtacagcaacaaagataagaca 11285 Score = 184 bits (93), Expect = 2e-43 Identities = 119/128 (92%) Strand = Plus / Minus Query: 176 gaaaagagtgcaatggaggagaagaagggccagnatgccaagttctggaacgagtttggc 235 ||||| ||||||||||||||||| ||||||||| |||||||||||||||| |||||||| Sbjct: 11202 gaaaaaagtgcaatggaggagaaaaagggccagtatgccaagttctggaatgagtttgga 11143 Query: 236 aaatcagtcaagctgggaatcattgaagatgcaacaaacaggaaccgtcttgcaaagctt 295 |||||||||||| |||| ||||||||||| ||||| |||||||||||||||||||||||| Sbjct: 11142 aaatcagtcaagttgggcatcattgaagacgcaactaacaggaaccgtcttgcaaagctt 11083 Query: 296 ctgagatt 303 |||||||| Sbjct: 11082 ctgagatt 11075 Score = 157 bits (79), Expect = 4e-35 Identities = 133/151 (88%) Strand = Plus / Minus Query: 312 ccaagtcagatggcaaacttgtctcccttgatgagtatatttcaaggatgaaatcagggc 371 ||||||| || |||||||||| ||| ||||||||||| |||||||||||||| |||||| Sbjct: 10984 ccaagtcggaaggcaaacttgcctctcttgatgagtacatttcaaggatgaagccagggc 10925 Query: 372 agaaggacatcttctaccttacaggaagcagcaaggaacagctagagaaatctccattcc 431 ||||||||||||| ||| |||| ||||||||||||||||| |||||||||| || |||| Sbjct: 10924 agaaggacatcttttacattaccggaagcagcaaggaacaattagagaaatcaccgttcc 10865 Query: 432 ttgagcagctaaccaagaaaaactacgaggt 462 ||||| ||||||||| || ||||||||||| Sbjct: 10864 ttgagaggctaaccaaaaagaactacgaggt 10834 Score = 115 bits (58), Expect = 2e-22 Identities = 73/78 (93%) Strand = Plus / Minus Query: 459 aggttatctacttcaccgaccccgtggatgagtacctgatgcaatacctcatggactacg 518 |||||||||||||||| ||||| || || |||||| |||||||||||||||||||||||| Sbjct: 10259 aggttatctacttcactgaccctgttgacgagtacttgatgcaatacctcatggactacg 10200 Query: 519 aggacaagaagttccaga 536 |||||||||||||||||| Sbjct: 10199 aggacaagaagttccaga 10182
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 230 bits (116), Expect = 4e-57 Identities = 146/156 (93%) Strand = Plus / Minus Query: 14 gactcagacacattgcccctcaatgtatcccgagaaatgcttcaacaacatagcagtctg 73 ||||| ||||||||||| ||||||||||| ||||||||||| |||||||||||||| ||| Sbjct: 29930734 gactcggacacattgcctctcaatgtatcacgagaaatgctccaacaacatagcagcctg 29930675 Query: 74 aagaccatcaagaagaaactgatccgcaaggctcttgacatgattaggaaacttgctgag 133 |||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||| Sbjct: 29930674 aagaccatcaagaagaaactaatccgcaaagctcttgacatgattagaaaacttgctgag 29930615 Query: 134 gaggatcctgatgagtacagcaacaaagaaaagaca 169 || |||||||||||||||||||||||||| |||||| Sbjct: 29930614 gaagatcctgatgagtacagcaacaaagataagaca 29930579 Score = 184 bits (93), Expect = 2e-43 Identities = 119/128 (92%) Strand = Plus / Minus Query: 176 gaaaagagtgcaatggaggagaagaagggccagnatgccaagttctggaacgagtttggc 235 ||||| ||||||||||||||||| ||||||||| |||||||||||||||| |||||||| Sbjct: 29930496 gaaaaaagtgcaatggaggagaaaaagggccagtatgccaagttctggaatgagtttgga 29930437 Query: 236 aaatcagtcaagctgggaatcattgaagatgcaacaaacaggaaccgtcttgcaaagctt 295 |||||||||||| |||| ||||||||||| ||||| |||||||||||||||||||||||| Sbjct: 29930436 aaatcagtcaagttgggcatcattgaagacgcaactaacaggaaccgtcttgcaaagctt 29930377 Query: 296 ctgagatt 303 |||||||| Sbjct: 29930376 ctgagatt 29930369 Score = 157 bits (79), Expect = 4e-35 Identities = 133/151 (88%) Strand = Plus / Minus Query: 312 ccaagtcagatggcaaacttgtctcccttgatgagtatatttcaaggatgaaatcagggc 371 ||||||| || |||||||||| ||| ||||||||||| |||||||||||||| |||||| Sbjct: 29930278 ccaagtcggaaggcaaacttgcctctcttgatgagtacatttcaaggatgaagccagggc 29930219 Query: 372 agaaggacatcttctaccttacaggaagcagcaaggaacagctagagaaatctccattcc 431 ||||||||||||| ||| |||| ||||||||||||||||| |||||||||| || |||| Sbjct: 29930218 agaaggacatcttttacattaccggaagcagcaaggaacaattagagaaatcaccgttcc 29930159 Query: 432 ttgagcagctaaccaagaaaaactacgaggt 462 ||||| ||||||||| || ||||||||||| Sbjct: 29930158 ttgagaggctaaccaaaaagaactacgaggt 29930128 Score = 115 bits (58), Expect = 2e-22 Identities = 73/78 (93%) Strand = Plus / Minus Query: 459 aggttatctacttcaccgaccccgtggatgagtacctgatgcaatacctcatggactacg 518 |||||||||||||||| ||||| || || |||||| |||||||||||||||||||||||| Sbjct: 29929553 aggttatctacttcactgaccctgttgacgagtacttgatgcaatacctcatggactacg 29929494 Query: 519 aggacaagaagttccaga 536 |||||||||||||||||| Sbjct: 29929493 aggacaagaagttccaga 29929476 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 cattgaagatgcaacaaaca 275 |||||||||||||||||||| Sbjct: 24392858 cattgaagatgcaacaaaca 24392877
>dbj|AP003769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0541C02 Length = 150660 Score = 230 bits (116), Expect = 4e-57 Identities = 146/156 (93%) Strand = Plus / Minus Query: 14 gactcagacacattgcccctcaatgtatcccgagaaatgcttcaacaacatagcagtctg 73 ||||| ||||||||||| ||||||||||| ||||||||||| |||||||||||||| ||| Sbjct: 6882 gactcggacacattgcctctcaatgtatcacgagaaatgctccaacaacatagcagcctg 6823 Query: 74 aagaccatcaagaagaaactgatccgcaaggctcttgacatgattaggaaacttgctgag 133 |||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||| Sbjct: 6822 aagaccatcaagaagaaactaatccgcaaagctcttgacatgattagaaaacttgctgag 6763 Query: 134 gaggatcctgatgagtacagcaacaaagaaaagaca 169 || |||||||||||||||||||||||||| |||||| Sbjct: 6762 gaagatcctgatgagtacagcaacaaagataagaca 6727 Score = 184 bits (93), Expect = 2e-43 Identities = 119/128 (92%) Strand = Plus / Minus Query: 176 gaaaagagtgcaatggaggagaagaagggccagnatgccaagttctggaacgagtttggc 235 ||||| ||||||||||||||||| ||||||||| |||||||||||||||| |||||||| Sbjct: 6644 gaaaaaagtgcaatggaggagaaaaagggccagtatgccaagttctggaatgagtttgga 6585 Query: 236 aaatcagtcaagctgggaatcattgaagatgcaacaaacaggaaccgtcttgcaaagctt 295 |||||||||||| |||| ||||||||||| ||||| |||||||||||||||||||||||| Sbjct: 6584 aaatcagtcaagttgggcatcattgaagacgcaactaacaggaaccgtcttgcaaagctt 6525 Query: 296 ctgagatt 303 |||||||| Sbjct: 6524 ctgagatt 6517 Score = 157 bits (79), Expect = 4e-35 Identities = 133/151 (88%) Strand = Plus / Minus Query: 312 ccaagtcagatggcaaacttgtctcccttgatgagtatatttcaaggatgaaatcagggc 371 ||||||| || |||||||||| ||| ||||||||||| |||||||||||||| |||||| Sbjct: 6426 ccaagtcggaaggcaaacttgcctctcttgatgagtacatttcaaggatgaagccagggc 6367 Query: 372 agaaggacatcttctaccttacaggaagcagcaaggaacagctagagaaatctccattcc 431 ||||||||||||| ||| |||| ||||||||||||||||| |||||||||| || |||| Sbjct: 6366 agaaggacatcttttacattaccggaagcagcaaggaacaattagagaaatcaccgttcc 6307 Query: 432 ttgagcagctaaccaagaaaaactacgaggt 462 ||||| ||||||||| || ||||||||||| Sbjct: 6306 ttgagaggctaaccaaaaagaactacgaggt 6276 Score = 115 bits (58), Expect = 2e-22 Identities = 73/78 (93%) Strand = Plus / Minus Query: 459 aggttatctacttcaccgaccccgtggatgagtacctgatgcaatacctcatggactacg 518 |||||||||||||||| ||||| || || |||||| |||||||||||||||||||||||| Sbjct: 5701 aggttatctacttcactgaccctgttgacgagtacttgatgcaatacctcatggactacg 5642 Query: 519 aggacaagaagttccaga 536 |||||||||||||||||| Sbjct: 5641 aggacaagaagttccaga 5624
>dbj|AP003614.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0481E08 Length = 171965 Score = 230 bits (116), Expect = 4e-57 Identities = 146/156 (93%) Strand = Plus / Minus Query: 14 gactcagacacattgcccctcaatgtatcccgagaaatgcttcaacaacatagcagtctg 73 ||||| ||||||||||| ||||||||||| ||||||||||| |||||||||||||| ||| Sbjct: 126247 gactcggacacattgcctctcaatgtatcacgagaaatgctccaacaacatagcagcctg 126188 Query: 74 aagaccatcaagaagaaactgatccgcaaggctcttgacatgattaggaaacttgctgag 133 |||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||| Sbjct: 126187 aagaccatcaagaagaaactaatccgcaaagctcttgacatgattagaaaacttgctgag 126128 Query: 134 gaggatcctgatgagtacagcaacaaagaaaagaca 169 || |||||||||||||||||||||||||| |||||| Sbjct: 126127 gaagatcctgatgagtacagcaacaaagataagaca 126092 Score = 184 bits (93), Expect = 2e-43 Identities = 119/128 (92%) Strand = Plus / Minus Query: 176 gaaaagagtgcaatggaggagaagaagggccagnatgccaagttctggaacgagtttggc 235 ||||| ||||||||||||||||| ||||||||| |||||||||||||||| |||||||| Sbjct: 126009 gaaaaaagtgcaatggaggagaaaaagggccagtatgccaagttctggaatgagtttgga 125950 Query: 236 aaatcagtcaagctgggaatcattgaagatgcaacaaacaggaaccgtcttgcaaagctt 295 |||||||||||| |||| ||||||||||| ||||| |||||||||||||||||||||||| Sbjct: 125949 aaatcagtcaagttgggcatcattgaagacgcaactaacaggaaccgtcttgcaaagctt 125890 Query: 296 ctgagatt 303 |||||||| Sbjct: 125889 ctgagatt 125882 Score = 157 bits (79), Expect = 4e-35 Identities = 133/151 (88%) Strand = Plus / Minus Query: 312 ccaagtcagatggcaaacttgtctcccttgatgagtatatttcaaggatgaaatcagggc 371 ||||||| || |||||||||| ||| ||||||||||| |||||||||||||| |||||| Sbjct: 125791 ccaagtcggaaggcaaacttgcctctcttgatgagtacatttcaaggatgaagccagggc 125732 Query: 372 agaaggacatcttctaccttacaggaagcagcaaggaacagctagagaaatctccattcc 431 ||||||||||||| ||| |||| ||||||||||||||||| |||||||||| || |||| Sbjct: 125731 agaaggacatcttttacattaccggaagcagcaaggaacaattagagaaatcaccgttcc 125672 Query: 432 ttgagcagctaaccaagaaaaactacgaggt 462 ||||| ||||||||| || ||||||||||| Sbjct: 125671 ttgagaggctaaccaaaaagaactacgaggt 125641 Score = 115 bits (58), Expect = 2e-22 Identities = 73/78 (93%) Strand = Plus / Minus Query: 459 aggttatctacttcaccgaccccgtggatgagtacctgatgcaatacctcatggactacg 518 |||||||||||||||| ||||| || || |||||| |||||||||||||||||||||||| Sbjct: 125066 aggttatctacttcactgaccctgttgacgagtacttgatgcaatacctcatggactacg 125007 Query: 519 aggacaagaagttccaga 536 |||||||||||||||||| Sbjct: 125006 aggacaagaagttccaga 124989
>dbj|AK063385.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-G08, full insert sequence Length = 1577 Score = 230 bits (116), Expect = 4e-57 Identities = 146/156 (93%) Strand = Plus / Plus Query: 14 gactcagacacattgcccctcaatgtatcccgagaaatgcttcaacaacatagcagtctg 73 ||||| ||||||||||| ||||||||||| ||||||||||| |||||||||||||| ||| Sbjct: 1415 gactcggacacattgcctctcaatgtatcacgagaaatgctccaacaacatagcagcctg 1474 Query: 74 aagaccatcaagaagaaactgatccgcaaggctcttgacatgattaggaaacttgctgag 133 |||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||| Sbjct: 1475 aagaccatcaagaagaaactaatccgcaaagctcttgacatgattagaaaacttgctgag 1534 Query: 134 gaggatcctgatgagtacagcaacaaagaaaagaca 169 || |||||||||||||||||||||||||| |||||| Sbjct: 1535 gaagatcctgatgagtacagcaacaaagataagaca 1570
>ref|NM_118552.2| Arabidopsis thaliana SHD (SHEPHERD); ATP binding / unfolded protein binding AT4G24190 (SHD) transcript variant AT4G24190.1 mRNA, complete cds Length = 2707 Score = 133 bits (67), Expect = 7e-28 Identities = 139/163 (85%) Strand = Plus / Plus Query: 374 aaggacatcttctaccttacaggaagcagcaaggaacagctagagaaatctccattcctt 433 |||||||| || ||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1750 aaggacatattttacatcacaggaagcagcaaggaacagctagagaaatctccattcctg 1809 Query: 434 gagcagctaaccaagaaaaactacgaggttatctacttcaccgaccccgtggatgagtac 493 ||| ||| | |||||| ||| ||||| |||| |||||| ||||| || ||||| ||| Sbjct: 1810 gagaggctcatcaagaagggctatgaggtcatcttcttcacagacccagttgatgaatac 1869 Query: 494 ctgatgcaatacctcatggactacgaggacaagaagttccaga 536 ||||||||||||| ||||| ||||| ||||| |||||||||| Sbjct: 1870 ttgatgcaatacctgatggattacgaagacaaaaagttccaga 1912 Score = 103 bits (52), Expect = 6e-19 Identities = 121/144 (84%) Strand = Plus / Plus Query: 4 gggtattgttgactcagacacattgcccctcaatgtatcccgagaaatgcttcaacaaca 63 |||| |||||||||| ||||||||||| || |||||||| ||||||||||||||||||| Sbjct: 1377 gggtcttgttgactctgacacattgcctctaaatgtatcaagagaaatgcttcaacaaca 1436 Query: 64 tagcagtctgaagaccatcaagaagaaactgatccgcaaggctcttgacatgattaggaa 123 ||||| | ||||| || |||||||| || ||||| ||||| ||||| ||||| | || Sbjct: 1437 cagcagcttaaagacaattaagaagaagcttatccgaaaggcgcttgatatgatccgcaa 1496 Query: 124 acttgctgaggaggatcctgatga 147 |||||||| || ||||||||||| Sbjct: 1497 gcttgctgaagaagatcctgatga 1520 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 218 ttctggaacgagtttggcaaatcagtcaagctgggaatcattgaagatgcaacaaacagg 277 |||||||||||||||||||| || ||||| || || |||||||| ||||| | |||||| Sbjct: 1594 ttctggaacgagtttggcaagtctgtcaaactaggtatcattgaggatgctgctaacagg 1653 Query: 278 aaccg 282 ||||| Sbjct: 1654 aaccg 1658
>ref|NM_202877.1| Arabidopsis thaliana SHD (SHEPHERD); ATP binding / unfolded protein binding AT4G24190 (SHD) transcript variant AT4G24190.2 mRNA, complete cds Length = 2707 Score = 133 bits (67), Expect = 7e-28 Identities = 139/163 (85%) Strand = Plus / Plus Query: 374 aaggacatcttctaccttacaggaagcagcaaggaacagctagagaaatctccattcctt 433 |||||||| || ||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1750 aaggacatattttacatcacaggaagcagcaaggaacagctagagaaatctccattcctg 1809 Query: 434 gagcagctaaccaagaaaaactacgaggttatctacttcaccgaccccgtggatgagtac 493 ||| ||| | |||||| ||| ||||| |||| |||||| ||||| || ||||| ||| Sbjct: 1810 gagaggctcatcaagaagggctatgaggtcatcttcttcacagacccagttgatgaatac 1869 Query: 494 ctgatgcaatacctcatggactacgaggacaagaagttccaga 536 ||||||||||||| ||||| ||||| ||||| |||||||||| Sbjct: 1870 ttgatgcaatacctgatggattacgaagacaaaaagttccaga 1912 Score = 103 bits (52), Expect = 6e-19 Identities = 121/144 (84%) Strand = Plus / Plus Query: 4 gggtattgttgactcagacacattgcccctcaatgtatcccgagaaatgcttcaacaaca 63 |||| |||||||||| ||||||||||| || |||||||| ||||||||||||||||||| Sbjct: 1377 gggtcttgttgactctgacacattgcctctaaatgtatcaagagaaatgcttcaacaaca 1436 Query: 64 tagcagtctgaagaccatcaagaagaaactgatccgcaaggctcttgacatgattaggaa 123 ||||| | ||||| || |||||||| || ||||| ||||| ||||| ||||| | || Sbjct: 1437 cagcagcttaaagacaattaagaagaagcttatccgaaaggcgcttgatatgatccgcaa 1496 Query: 124 acttgctgaggaggatcctgatga 147 |||||||| || ||||||||||| Sbjct: 1497 gcttgctgaagaagatcctgatga 1520 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 218 ttctggaacgagtttggcaaatcagtcaagctgggaatcattgaagatgcaacaaacagg 277 |||||||||||||||||||| || ||||| || || |||||||| ||||| | |||||| Sbjct: 1594 ttctggaacgagtttggcaagtctgtcaaactaggtatcattgaggatgctgctaacagg 1653 Query: 278 aaccg 282 ||||| Sbjct: 1654 aaccg 1658
>gb|AY072394.1| Arabidopsis thaliana HSP90-like protein (At4g24190) mRNA, complete cds Length = 897 Score = 133 bits (67), Expect = 7e-28 Identities = 139/163 (85%) Strand = Plus / Plus Query: 374 aaggacatcttctaccttacaggaagcagcaaggaacagctagagaaatctccattcctt 433 |||||||| || ||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 709 aaggacatattttacatcacaggaagcagcaaggaacagctagagaaatctccattcctg 768 Query: 434 gagcagctaaccaagaaaaactacgaggttatctacttcaccgaccccgtggatgagtac 493 ||| ||| | |||||| ||| ||||| |||| |||||| ||||| || ||||| ||| Sbjct: 769 gagaggctcatcaagaagggctatgaggtcatcttcttcacagacccagttgatgaatac 828 Query: 494 ctgatgcaatacctcatggactacgaggacaagaagttccaga 536 ||||||||||||| ||||| ||||| ||||| |||||||||| Sbjct: 829 ttgatgcaatacctgatggattacgaagacaaaaagttccaga 871 Score = 103 bits (52), Expect = 6e-19 Identities = 121/144 (84%) Strand = Plus / Plus Query: 4 gggtattgttgactcagacacattgcccctcaatgtatcccgagaaatgcttcaacaaca 63 |||| |||||||||| ||||||||||| || |||||||| ||||||||||||||||||| Sbjct: 336 gggtcttgttgactctgacacattgcctctaaatgtatcaagagaaatgcttcaacaaca 395 Query: 64 tagcagtctgaagaccatcaagaagaaactgatccgcaaggctcttgacatgattaggaa 123 ||||| | ||||| || |||||||| || ||||| ||||| ||||| ||||| | || Sbjct: 396 cagcagcttaaagacaattaagaagaagcttatccgaaaggcgcttgatatgatccgcaa 455 Query: 124 acttgctgaggaggatcctgatga 147 |||||||| || ||||||||||| Sbjct: 456 gcttgctgaagaagatcctgatga 479 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 218 ttctggaacgagtttggcaaatcagtcaagctgggaatcattgaagatgcaacaaacagg 277 |||||||||||||||||||| || ||||| || || |||||||| ||||| | |||||| Sbjct: 553 ttctggaacgagtttggcaagtctgtcaaactaggtatcattgaggatgctgctaacagg 612 Query: 278 aaccg 282 ||||| Sbjct: 613 aaccg 617
>gb|AY039895.1| Arabidopsis thaliana AT4g24190/T22A6_20 mRNA, complete cds Length = 2702 Score = 133 bits (67), Expect = 7e-28 Identities = 139/163 (85%) Strand = Plus / Plus Query: 374 aaggacatcttctaccttacaggaagcagcaaggaacagctagagaaatctccattcctt 433 |||||||| || ||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1744 aaggacatattttacatcacaggaagcagcaaggaacagctagagaaatctccattcctg 1803 Query: 434 gagcagctaaccaagaaaaactacgaggttatctacttcaccgaccccgtggatgagtac 493 ||| ||| | |||||| ||| ||||| |||| |||||| ||||| || ||||| ||| Sbjct: 1804 gagaggctcatcaagaagggctatgaggtcatcttcttcacagacccagttgatgaatac 1863 Query: 494 ctgatgcaatacctcatggactacgaggacaagaagttccaga 536 ||||||||||||| ||||| ||||| ||||| |||||||||| Sbjct: 1864 ttgatgcaatacctgatggattacgaagacaaaaagttccaga 1906 Score = 103 bits (52), Expect = 6e-19 Identities = 121/144 (84%) Strand = Plus / Plus Query: 4 gggtattgttgactcagacacattgcccctcaatgtatcccgagaaatgcttcaacaaca 63 |||| |||||||||| ||||||||||| || |||||||| ||||||||||||||||||| Sbjct: 1371 gggtcttgttgactctgacacattgcctctaaatgtatcaagagaaatgcttcaacaaca 1430 Query: 64 tagcagtctgaagaccatcaagaagaaactgatccgcaaggctcttgacatgattaggaa 123 ||||| | ||||| || |||||||| || ||||| ||||| ||||| ||||| | || Sbjct: 1431 cagcagcttaaagacaattaagaagaagcttatccgaaaggcgcttgatatgatccgcaa 1490 Query: 124 acttgctgaggaggatcctgatga 147 |||||||| || ||||||||||| Sbjct: 1491 gcttgctgaagaagatcctgatga 1514 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 218 ttctggaacgagtttggcaaatcagtcaagctgggaatcattgaagatgcaacaaacagg 277 |||||||||||||||||||| || ||||| || || |||||||| ||||| | |||||| Sbjct: 1588 ttctggaacgagtttggcaagtctgtcaaactaggtatcattgaggatgctgctaacagg 1647 Query: 278 aaccg 282 ||||| Sbjct: 1648 aaccg 1652
>gb|BT004527.1| Arabidopsis thaliana At4g24190/T22A6_20 gene, complete cds Length = 2472 Score = 133 bits (67), Expect = 7e-28 Identities = 139/163 (85%) Strand = Plus / Plus Query: 374 aaggacatcttctaccttacaggaagcagcaaggaacagctagagaaatctccattcctt 433 |||||||| || ||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1696 aaggacatattttacatcacaggaagcagcaaggaacagctagagaaatctccattcctg 1755 Query: 434 gagcagctaaccaagaaaaactacgaggttatctacttcaccgaccccgtggatgagtac 493 ||| ||| | |||||| ||| ||||| |||| |||||| ||||| || ||||| ||| Sbjct: 1756 gagaggctcatcaagaagggctatgaggtcatcttcttcacagacccagttgatgaatac 1815 Query: 494 ctgatgcaatacctcatggactacgaggacaagaagttccaga 536 ||||||||||||| ||||| ||||| ||||| |||||||||| Sbjct: 1816 ttgatgcaatacctgatggattacgaagacaaaaagttccaga 1858 Score = 103 bits (52), Expect = 6e-19 Identities = 121/144 (84%) Strand = Plus / Plus Query: 4 gggtattgttgactcagacacattgcccctcaatgtatcccgagaaatgcttcaacaaca 63 |||| |||||||||| ||||||||||| || |||||||| ||||||||||||||||||| Sbjct: 1323 gggtcttgttgactctgacacattgcctctaaatgtatcaagagaaatgcttcaacaaca 1382 Query: 64 tagcagtctgaagaccatcaagaagaaactgatccgcaaggctcttgacatgattaggaa 123 ||||| | ||||| || |||||||| || ||||| ||||| ||||| ||||| | || Sbjct: 1383 cagcagcttaaagacaattaagaagaagcttatccgaaaggcgcttgatatgatccgcaa 1442 Query: 124 acttgctgaggaggatcctgatga 147 |||||||| || ||||||||||| Sbjct: 1443 gcttgctgaagaagatcctgatga 1466 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 218 ttctggaacgagtttggcaaatcagtcaagctgggaatcattgaagatgcaacaaacagg 277 |||||||||||||||||||| || ||||| || || |||||||| ||||| | |||||| Sbjct: 1540 ttctggaacgagtttggcaagtctgtcaaactaggtatcattgaggatgctgctaacagg 1599 Query: 278 aaccg 282 ||||| Sbjct: 1600 aaccg 1604
>dbj|AB064528.1| Arabidopsis thaliana SHD mRNA for SHEPHERD, complete cds Length = 2674 Score = 133 bits (67), Expect = 7e-28 Identities = 139/163 (85%) Strand = Plus / Plus Query: 374 aaggacatcttctaccttacaggaagcagcaaggaacagctagagaaatctccattcctt 433 |||||||| || ||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1736 aaggacatattttacatcacaggaagcagcaaggaacagctagagaaatctccattcctg 1795 Query: 434 gagcagctaaccaagaaaaactacgaggttatctacttcaccgaccccgtggatgagtac 493 ||| ||| | |||||| ||| ||||| |||| |||||| ||||| || ||||| ||| Sbjct: 1796 gagaggctcatcaagaagggctatgaggtcatcttcttcacagacccagttgatgaatac 1855 Query: 494 ctgatgcaatacctcatggactacgaggacaagaagttccaga 536 ||||||||||||| ||||| ||||| ||||| |||||||||| Sbjct: 1856 ttgatgcaatacctgatggattacgaagacaaaaagttccaga 1898 Score = 103 bits (52), Expect = 6e-19 Identities = 121/144 (84%) Strand = Plus / Plus Query: 4 gggtattgttgactcagacacattgcccctcaatgtatcccgagaaatgcttcaacaaca 63 |||| |||||||||| ||||||||||| || |||||||| ||||||||||||||||||| Sbjct: 1363 gggtcttgttgactctgacacattgcctctaaatgtatcaagagaaatgcttcaacaaca 1422 Query: 64 tagcagtctgaagaccatcaagaagaaactgatccgcaaggctcttgacatgattaggaa 123 ||||| | ||||| || |||||||| || ||||| ||||| ||||| ||||| | || Sbjct: 1423 cagcagcttaaagacaattaagaagaagcttatccgaaaggcgcttgatatgatccgcaa 1482 Query: 124 acttgctgaggaggatcctgatga 147 |||||||| || ||||||||||| Sbjct: 1483 gcttgctgaagaagatcctgatga 1506 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 218 ttctggaacgagtttggcaaatcagtcaagctgggaatcattgaagatgcaacaaacagg 277 |||||||||||||||||||| || ||||| || || |||||||| ||||| | |||||| Sbjct: 1580 ttctggaacgagtttggcaagtctgtcaaactaggtatcattgaggatgctgctaacagg 1639 Query: 278 aaccg 282 ||||| Sbjct: 1640 aaccg 1644
>gb|AF544993.1| Xerophyta viscosa Grp94 mRNA, complete cds Length = 2947 Score = 123 bits (62), Expect = 6e-25 Identities = 149/178 (83%) Strand = Plus / Plus Query: 359 atgaaatcagggcagaaggacatcttctaccttacaggaagcagcaaggaacagctagag 418 |||||| | |||||||||||||| |||||| | || |||| |||||| || ||||||||| Sbjct: 1681 atgaaacctgggcagaaggacattttctacttaactggaaccagcaaagagcagctagag 1740 Query: 419 aaatctccattccttgagcagctaaccaagaaaaactacgaggttatctacttcaccgac 478 |||||||||||||||||| ||| | ||||| |||| ||||| || | |||||| ||| Sbjct: 1741 aaatctccattccttgaggggcttaagaagaaggactatgaggtcattttcttcactgac 1800 Query: 479 cccgtggatgagtacctgatgcaatacctcatggactacgaggacaagaagttccaga 536 || || |||||||| ||||||||||| | |||||||| ||||||||||| ||||||| Sbjct: 1801 ccagttgatgagtatttgatgcaatacttgatggactatgaggacaagaaattccaga 1858 Score = 105 bits (53), Expect = 1e-19 Identities = 125/149 (83%) Strand = Plus / Plus Query: 1 gatgggtattgttgactcagacacattgcccctcaatgtatcccgagaaatgcttcaaca 60 ||||||| | |||||||| || ||| | || || |||||||| |||| ||||||||||| Sbjct: 1329 gatgggtctcgttgactcggatacacttccactgaatgtatcaagagagatgcttcaaca 1388 Query: 61 acatagcagtctgaagaccatcaagaagaaactgatccgcaaggctcttgacatgattag 120 |||||||| |||||||| || ||||||||| |||| || || |||||||| |||||||| Sbjct: 1389 gcatagcagcctgaagacaattaagaagaaattgatacgtaaagctcttgatatgattag 1448 Query: 121 gaaacttgctgaggaggatcctgatgagt 149 ||| ||||||| || ||||||||||||| Sbjct: 1449 aaaaattgctgatgaagatcctgatgagt 1477
>gb|L14594.1|CTRHSP90A Catharanthus roseus heat shock protein 90 mRNA, complete cds Length = 2670 Score = 115 bits (58), Expect = 2e-22 Identities = 270/341 (79%) Strand = Plus / Plus Query: 194 gagaagaagggccagnatgccaagttctggaacgagtttggcaaatcagtcaagctggga 253 ||||||||||| ||| |||| || |||||||| || |||||||| ||| | || ||||| Sbjct: 1533 gagaagaagggtcagtatgcgaaattctggaatgaatttggcaagtcaattaaactgggt 1592 Query: 254 atcattgaagatgcaacaaacaggaaccgtcttgcaaagcttctgagattcgagagttcc 313 |||||||| ||||| | || || ||||| | ||||| ||||| | || |||||| | Sbjct: 1593 atcattgaggatgctgctaatagaaaccgcttggcaaaacttctccggtttgagagtaca 1652 Query: 314 aagtcagatggcaaacttgtctcccttgatgagtatatttcaaggatgaaatcagggcag 373 || ||||| || || ||| || || ||| | ||||| ||||| ||||| ||||| ||| Sbjct: 1653 aaatcagaggggaagcttacttcactagatcaatatatctcaagaatgaagtcaggacag 1712 Query: 374 aaggacatcttctaccttacaggaagcagcaaggaacagctagagaaatctccattcctt 433 || || ||||| ||| |||| |||| ||||| ||||| | ||||||||||| ||||| Sbjct: 1713 aaagatatcttttacattaccggaacaagcaaagaacaattggagaaatctcctttcctc 1772 Query: 434 gagcagctaaccaagaaaaactacgaggttatctacttcaccgaccccgtggatgagtac 493 ||| ||| || |||||||| || ||||||||| |||||| ||||| || ||||||||| Sbjct: 1773 gagaggcttacaaagaaaaattatgaggttatcctcttcacagacccagtcgatgagtac 1832 Query: 494 ctgatgcaatacctcatggactacgaggacaagaagttcca 534 ||||||||||| || |||||||| ||||| ||||| ||||| Sbjct: 1833 ctgatgcaatatctaatggactatgaggataagaaattcca 1873 Score = 44.1 bits (22), Expect = 0.46 Identities = 55/66 (83%) Strand = Plus / Plus Query: 4 gggtattgttgactcagacacattgcccctcaatgtatcccgagaaatgcttcaacaaca 63 |||| ||||||| || || || ||||| || |||||||| |||||||||| || ||||| Sbjct: 1340 gggtcttgttgattctgataccttgccacttaatgtatcgagagaaatgctccagcaaca 1399 Query: 64 tagcag 69 |||||| Sbjct: 1400 tagcag 1405
>emb|AL078637.1|ATT22A6 Arabidopsis thaliana DNA chromosome 4, BAC clone T22A6 (ESSA project) Length = 108459 Score = 103 bits (52), Expect = 6e-19 Identities = 121/144 (84%) Strand = Plus / Minus Query: 4 gggtattgttgactcagacacattgcccctcaatgtatcccgagaaatgcttcaacaaca 63 |||| |||||||||| ||||||||||| || |||||||| ||||||||||||||||||| Sbjct: 4466 gggtcttgttgactctgacacattgcctctaaatgtatcaagagaaatgcttcaacaaca 4407 Query: 64 tagcagtctgaagaccatcaagaagaaactgatccgcaaggctcttgacatgattaggaa 123 ||||| | ||||| || |||||||| || ||||| ||||| ||||| ||||| | || Sbjct: 4406 cagcagcttaaagacaattaagaagaagcttatccgaaaggcgcttgatatgatccgcaa 4347 Query: 124 acttgctgaggaggatcctgatga 147 |||||||| || ||||||||||| Sbjct: 4346 gcttgctgaagaagatcctgatga 4323 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Minus Query: 374 aaggacatcttctaccttacaggaagcagcaaggaacagctagagaaatctccattcct 432 |||||||| || ||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 3889 aaggacatattttacatcacaggaagcagcaaggaacagctagagaaatctccattcct 3831 Score = 67.9 bits (34), Expect = 3e-08 Identities = 67/78 (85%) Strand = Plus / Minus Query: 459 aggttatctacttcaccgaccccgtggatgagtacctgatgcaatacctcatggactacg 518 |||| |||| |||||| ||||| || ||||| ||| ||||||||||||| ||||| |||| Sbjct: 3727 aggtcatcttcttcacagacccagttgatgaatacttgatgcaatacctgatggattacg 3668 Query: 519 aggacaagaagttccaga 536 | ||||| |||||||||| Sbjct: 3667 aagacaaaaagttccaga 3650 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 218 ttctggaacgagtttggcaaatcagtcaagctgggaatcattgaagatgcaacaaacagg 277 |||||||||||||||||||| || ||||| || || |||||||| ||||| | |||||| Sbjct: 4129 ttctggaacgagtttggcaagtctgtcaaactaggtatcattgaggatgctgctaacagg 4070 Query: 278 aaccg 282 ||||| Sbjct: 4069 aaccg 4065
>emb|AL161561.2|ATCHRIV61 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 61 Length = 198402 Score = 103 bits (52), Expect = 6e-19 Identities = 121/144 (84%) Strand = Plus / Minus Query: 4 gggtattgttgactcagacacattgcccctcaatgtatcccgagaaatgcttcaacaaca 63 |||| |||||||||| ||||||||||| || |||||||| ||||||||||||||||||| Sbjct: 21123 gggtcttgttgactctgacacattgcctctaaatgtatcaagagaaatgcttcaacaaca 21064 Query: 64 tagcagtctgaagaccatcaagaagaaactgatccgcaaggctcttgacatgattaggaa 123 ||||| | ||||| || |||||||| || ||||| ||||| ||||| ||||| | || Sbjct: 21063 cagcagcttaaagacaattaagaagaagcttatccgaaaggcgcttgatatgatccgcaa 21004 Query: 124 acttgctgaggaggatcctgatga 147 |||||||| || ||||||||||| Sbjct: 21003 gcttgctgaagaagatcctgatga 20980 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Minus Query: 374 aaggacatcttctaccttacaggaagcagcaaggaacagctagagaaatctccattcct 432 |||||||| || ||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 20546 aaggacatattttacatcacaggaagcagcaaggaacagctagagaaatctccattcct 20488 Score = 67.9 bits (34), Expect = 3e-08 Identities = 67/78 (85%) Strand = Plus / Minus Query: 459 aggttatctacttcaccgaccccgtggatgagtacctgatgcaatacctcatggactacg 518 |||| |||| |||||| ||||| || ||||| ||| ||||||||||||| ||||| |||| Sbjct: 20384 aggtcatcttcttcacagacccagttgatgaatacttgatgcaatacctgatggattacg 20325 Query: 519 aggacaagaagttccaga 536 | ||||| |||||||||| Sbjct: 20324 aagacaaaaagttccaga 20307 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 218 ttctggaacgagtttggcaaatcagtcaagctgggaatcattgaagatgcaacaaacagg 277 |||||||||||||||||||| || ||||| || || |||||||| ||||| | |||||| Sbjct: 20786 ttctggaacgagtttggcaagtctgtcaaactaggtatcattgaggatgctgctaacagg 20727 Query: 278 aaccg 282 ||||| Sbjct: 20726 aaccg 20722
>dbj|AB064527.1| Arabidopsis thaliana SHD gene for SHEPHERD, complete cds Length = 6679 Score = 103 bits (52), Expect = 6e-19 Identities = 121/144 (84%) Strand = Plus / Plus Query: 4 gggtattgttgactcagacacattgcccctcaatgtatcccgagaaatgcttcaacaaca 63 |||| |||||||||| ||||||||||| || |||||||| ||||||||||||||||||| Sbjct: 4025 gggtcttgttgactctgacacattgcctctaaatgtatcaagagaaatgcttcaacaaca 4084 Query: 64 tagcagtctgaagaccatcaagaagaaactgatccgcaaggctcttgacatgattaggaa 123 ||||| | ||||| || |||||||| || ||||| ||||| ||||| ||||| | || Sbjct: 4085 cagcagcttaaagacaattaagaagaagcttatccgaaaggcgcttgatatgatccgcaa 4144 Query: 124 acttgctgaggaggatcctgatga 147 |||||||| || ||||||||||| Sbjct: 4145 gcttgctgaagaagatcctgatga 4168 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 374 aaggacatcttctaccttacaggaagcagcaaggaacagctagagaaatctccattcct 432 |||||||| || ||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 4602 aaggacatattttacatcacaggaagcagcaaggaacagctagagaaatctccattcct 4660 Score = 67.9 bits (34), Expect = 3e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 459 aggttatctacttcaccgaccccgtggatgagtacctgatgcaatacctcatggactacg 518 |||| |||| |||||| ||||| || ||||| ||| ||||||||||||| ||||| |||| Sbjct: 4764 aggtcatcttcttcacagacccagttgatgaatacttgatgcaatacctgatggattacg 4823 Query: 519 aggacaagaagttccaga 536 | ||||| |||||||||| Sbjct: 4824 aagacaaaaagttccaga 4841 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 218 ttctggaacgagtttggcaaatcagtcaagctgggaatcattgaagatgcaacaaacagg 277 |||||||||||||||||||| || ||||| || || |||||||| ||||| | |||||| Sbjct: 4362 ttctggaacgagtttggcaagtctgtcaaactaggtatcattgaggatgctgctaacagg 4421 Query: 278 aaccg 282 ||||| Sbjct: 4422 aaccg 4426
>emb|AL109619.1|ATT19F6 Arabidopsis thaliana DNA chromosome 4, BAC clone T19F6, partial sequence (ESSA project) Length = 77567 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Minus Query: 374 aaggacatcttctaccttacaggaagcagcaaggaacagctagagaaatctccattcct 432 |||||||| || ||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 77251 aaggacatattttacatcacaggaagcagcaaggaacagctagagaaatctccattcct 77193 Score = 67.9 bits (34), Expect = 3e-08 Identities = 67/78 (85%) Strand = Plus / Minus Query: 459 aggttatctacttcaccgaccccgtggatgagtacctgatgcaatacctcatggactacg 518 |||| |||| |||||| ||||| || ||||| ||| ||||||||||||| ||||| |||| Sbjct: 77089 aggtcatcttcttcacagacccagttgatgaatacttgatgcaatacctgatggattacg 77030 Query: 519 aggacaagaagttccaga 536 | ||||| |||||||||| Sbjct: 77029 aagacaaaaagttccaga 77012 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 218 ttctggaacgagtttggcaaatcagtcaagctgggaatcattgaagatgcaacaaacagg 277 |||||||||||||||||||| || ||||| || || |||||||| ||||| | |||||| Sbjct: 77491 ttctggaacgagtttggcaagtctgtcaaactaggtatcattgaggatgctgctaacagg 77432 Query: 278 aaccg 282 ||||| Sbjct: 77431 aaccg 77427
>gb|AC002343.1|ATAC002343 Arabidopsis thaliana chromosome IV BAC T19F6 genomic sequence, complete sequence Length = 116156 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 374 aaggacatcttctaccttacaggaagcagcaaggaacagctagagaaatctccattcct 432 |||||||| || ||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 317 aaggacatattttacatcacaggaagcagcaaggaacagctagagaaatctccattcct 375 Score = 67.9 bits (34), Expect = 3e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 459 aggttatctacttcaccgaccccgtggatgagtacctgatgcaatacctcatggactacg 518 |||| |||| |||||| ||||| || ||||| ||| ||||||||||||| ||||| |||| Sbjct: 479 aggtcatcttcttcacagacccagttgatgaatacttgatgcaatacctgatggattacg 538 Query: 519 aggacaagaagttccaga 536 | ||||| |||||||||| Sbjct: 539 aagacaaaaagttccaga 556 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 218 ttctggaacgagtttggcaaatcagtcaagctgggaatcattgaagatgcaacaaacagg 277 |||||||||||||||||||| || ||||| || || |||||||| ||||| | |||||| Sbjct: 77 ttctggaacgagtttggcaagtctgtcaaactaggtatcattgaggatgctgctaacagg 136 Query: 278 aaccg 282 ||||| Sbjct: 137 aaccg 141
>gb|AC149634.8| Medicago truncatula clone mth2-5i17, complete sequence Length = 116601 Score = 73.8 bits (37), Expect = 5e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 9 ttgttgactcagacacattgcccctcaatgtatcccgagaaatgcttcaacaacatagca 68 ||||||| || ||||| ||||| | |||||||| |||||||||||||||||||| || | Sbjct: 78952 ttgttgattctgacactttgccattgaatgtatcacgagaaatgcttcaacaacacagta 79011 Query: 69 gtctgaagaccatcaagaagaaact 93 |||||||||| || || |||||||| Sbjct: 79012 gtctgaagacaataaaaaagaaact 79036 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 459 aggttatctacttcaccgaccccgtggatgagtacctgatgcaatacctcatggactacg 518 ||||||| | |||||| ||||| || ||||| ||| ||||||||||||| ||||| || | Sbjct: 79741 aggttattttcttcactgacccagttgatgaatacttgatgcaatacctgatggattatg 79800 Query: 519 aggacaagaagttcca 534 | || ||||||||||| Sbjct: 79801 aagataagaagttcca 79816 Score = 40.1 bits (20), Expect = 7.3 Identities = 80/100 (80%) Strand = Plus / Plus Query: 338 cttgatgagtatatttcaaggatgaaatcagggcagaaggacatcttctaccttacagga 397 |||||| |||| || || || |||||| | || |||||||| ||||| ||| | || ||| Sbjct: 79518 cttgatcagtacatatctagaatgaaagctggacagaaggatatcttttacataactgga 79577 Query: 398 agcagcaaggaacagctagagaaatctccattccttgagc 437 | |||||| ||||| || || || || ||||||||||||| Sbjct: 79578 accagcaaagaacaactggaaaattcaccattccttgagc 79617 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 213 ccaagttctggaacgagtttggcaaatc 240 ||||||||||||| |||||||| ||||| Sbjct: 79297 ccaagttctggaatgagtttggaaaatc 79324
>gb|AF239931.1|AF239931 Euphorbia esula putative heat-shock protein 90 mRNA, partial cds Length = 1207 Score = 56.0 bits (28), Expect = 1e-04 Identities = 108/132 (81%), Gaps = 2/132 (1%) Strand = Plus / Plus Query: 254 atcattgaagatgcaacaaacaggaaccgtcttgcaaagcttctgagattcgagagttcc 313 ||||||||||| ||||| ||||| ||||| | ||||| ||||| ||||| ||||| || Sbjct: 87 atcattgaagacgcaactaacagaaaccgcttagcaaaacttctcagatttgagagctca 146 Query: 314 aagtcagatggcaaacttgtc-tcccttgatgagtatatttcaaggatgaaatcagggca 372 ||||| ||||| ||| ||| | || |||||| |||| || ||||| |||||||| ||||| Sbjct: 147 aagtccgatggtaaa-ttgacttcacttgatcagtacatctcaagaatgaaatctgggca 205 Query: 373 gaaggacatctt 384 ||||| ||||| Sbjct: 206 aaaggatatctt 217 Score = 48.1 bits (24), Expect = 0.030 Identities = 57/68 (83%) Strand = Plus / Plus Query: 469 cttcaccgaccccgtggatgagtacctgatgcaatacctcatggactacgaggacaagaa 528 ||||||||| || || ||||| |||||||||||||| | ||||| || || |||||||| Sbjct: 302 cttcaccgatccagttgatgaatacctgatgcaatatttgatggattatgaagacaagaa 361 Query: 529 gttccaga 536 ||||||| Sbjct: 362 attccaga 369
>gb|AY769465.1| Stylonychia lemnae macronuclear development protein 53 (mdp53) mRNA, partial sequence Length = 529 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 368 gggcagaaggacatcttctaccttacagga 397 |||||||||||||||||||| |||||||| Sbjct: 431 gggcagaaggacatcttctatattacagga 460
>ref|XM_571124.1| Cryptococcus neoformans var. neoformans JEC21 cation-transporting ATPase (CNE01170) partial mRNA Length = 2449 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 29 cccctcaatgtatcccgagaaa 50 |||||||||||||||||||||| Sbjct: 1211 cccctcaatgtatcccgagaaa 1232
>gb|AC118414.9| Rattus norvegicus 3 BAC CH230-223K21 (Children's Hospital Oakland Research Institute) complete sequence Length = 217330 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 gatgggtattgttgactcaga 21 ||||||||||||||||||||| Sbjct: 66892 gatgggtattgttgactcaga 66872
>gb|AY288511.1| Euglena gracilis heat shock protein 90 mRNA, partial cds Length = 1915 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 511 ggactacgaggacaagaagtt 531 ||||||||||||||||||||| Sbjct: 1447 ggactacgaggacaagaagtt 1467
>gb|AY288510.1| Euglena gracilis heat shock protein 90 mRNA, partial cds Length = 1915 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 511 ggactacgaggacaagaagtt 531 ||||||||||||||||||||| Sbjct: 1447 ggactacgaggacaagaagtt 1467
>gb|AY236713.1| Goniomonas sp. ATCC 50108 heat shock protein 90 (Hsp90) gene, partial cds Length = 1661 Score = 42.1 bits (21), Expect = 1.8 Identities = 33/37 (89%) Strand = Plus / Plus Query: 457 cgaggttatctacttcaccgaccccgtggatgagtac 493 ||||||||||||| | ||||||||| | ||||||||| Sbjct: 1350 cgaggttatctacatgaccgaccccatcgatgagtac 1386
>gb|AC102613.7| Mus musculus chromosome 1, clone RP23-418C16, complete sequence Length = 201275 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 ttaggaaacttgctgaggaggatcc 141 |||||||||||||| |||||||||| Sbjct: 58469 ttaggaaacttgctcaggaggatcc 58493
>ref|XM_766368.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_190_49812_70631) partial mRNA Length = 20820 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 cttgctgaggaggatcctgat 145 ||||||||||||||||||||| Sbjct: 1177 cttgctgaggaggatcctgat 1197
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 210 atgccaagttctggaacgagtttgg 234 |||||||||||||||| |||||||| Sbjct: 1057349 atgccaagttctggaaagagtttgg 1057373 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 210 atgccaagttctggaacgagtttgg 234 |||||||||||||||| |||||||| Sbjct: 914317 atgccaagttctggaaagagtttgg 914341
>emb|AL354852.12| Human DNA sequence from clone RP11-115N13 on chromosome 13, complete sequence Length = 165882 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 149 tacagcaacaaagaaaagaca 169 ||||||||||||||||||||| Sbjct: 138416 tacagcaacaaagaaaagaca 138436
>gb|AC162861.2| Mus musculus chromosome 1, clone RP23-236B21, complete sequence Length = 151717 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 ttaggaaacttgctgaggaggatcc 141 |||||||||||||| |||||||||| Sbjct: 51911 ttaggaaacttgctcaggaggatcc 51887
>gb|CP000207.1| Drosophila melanogaster genomic scaffold 211000022280721 Length = 230078 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 303 tcgagagttccaagtcagatg 323 ||||||||||||||||||||| Sbjct: 79929 tcgagagttccaagtcagatg 79949
>gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 5, complete sequence Length = 1507550 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 cctcaatgtatcccgagaaa 50 |||||||||||||||||||| Sbjct: 324267 cctcaatgtatcccgagaaa 324286
>gb|AC139130.10| Mus musculus chromosome 15, clone RP23-210B16, complete sequence Length = 198154 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 agctgggaatcattgaagat 265 |||||||||||||||||||| Sbjct: 61690 agctgggaatcattgaagat 61671
>gb|AC005610.1| Homo sapiens chromosome 5, PAC clone 502L6 (LBNL H156), complete sequence Length = 223408 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 acagcaacaaagaaaagaca 169 |||||||||||||||||||| Sbjct: 219807 acagcaacaaagaaaagaca 219788
>gb|AC158554.6| Mus musculus chromosome 15, clone RP23-353O17, complete sequence Length = 192019 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 ggcaaacttgtctcccttga 342 |||||||||||||||||||| Sbjct: 117426 ggcaaacttgtctcccttga 117407
>gb|AF297464.1| Modoc virus NS3 protein gene, partial cds Length = 1071 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 agaaaaactacgaggttatc 466 |||||||||||||||||||| Sbjct: 644 agaaaaactacgaggttatc 663
>ref|XM_799049.1| Trypanosoma cruzi strain CL Brener trans-sialidase (Tc00.1047053507411.10) partial mRNA Length = 2787 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 gtacagcaacaaagaaaaga 167 |||||||||||||||||||| Sbjct: 1845 gtacagcaacaaagaaaaga 1864
>ref|XM_799314.1| Trypanosoma cruzi strain CL Brener trans-sialidase (Tc00.1047053508697.10) partial mRNA Length = 2787 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 gtacagcaacaaagaaaaga 167 |||||||||||||||||||| Sbjct: 1845 gtacagcaacaaagaaaaga 1864
>gb|AC112158.4| Mus musculus BAC clone RP24-116K14 from chromosome 15, complete sequence Length = 175171 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 368 gggcagaaggacatcttctacctt 391 ||||||||| |||||||||||||| Sbjct: 138007 gggcagaagaacatcttctacctt 138030
>gb|AC117644.6| Mus musculus chromosome 7, clone RP23-238L7, complete sequence Length = 217015 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 acagcaacaaagaaaagaca 169 |||||||||||||||||||| Sbjct: 68242 acagcaacaaagaaaagaca 68223
>gb|AC161054.3| Mus musculus BAC clone RP23-381H23 from chromosome 10, complete sequence Length = 202932 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 gatgagtacagcaacaaaga 162 |||||||||||||||||||| Sbjct: 78400 gatgagtacagcaacaaaga 78419
>emb|AL592490.8| Human DNA sequence from clone RP11-432J3 on chromosome 13 Contains the 5' end of the PCDH20 gene for protocadherin 20 and a novel gene, complete sequence Length = 59272 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 331 tgtctcccttgatgagtatatttc 354 ||||||||||||||| |||||||| Sbjct: 28996 tgtctcccttgatgactatatttc 29019
>emb|AL031651.33|HS1054A22 Human DNA sequence from clone RP5-1054A22 on chromosome 20q11.22-12 Contains the TGM2 gene for transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase), the gene for a novel protein (KIAA1755), part of a novel gene and a CpG island, complete sequence Length = 166942 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 tatttcaaggatgaaatcag 368 |||||||||||||||||||| Sbjct: 128162 tatttcaaggatgaaatcag 128181
>emb|AJ242984.1|MVI242984 Modoc virus genomic RNA for polyprotein gene Length = 10600 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 agaaaaactacgaggttatc 466 |||||||||||||||||||| Sbjct: 5322 agaaaaactacgaggttatc 5341
>emb|AL669816.3| Mouse DNA sequence from clone RP23-266C4 on chromosome 11 Contains the 3' end of a novel gene, complete sequence Length = 203827 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 ctcttgacatgattaggaaa 124 |||||||||||||||||||| Sbjct: 90661 ctcttgacatgattaggaaa 90680
>gb|AC060226.39| Homo sapiens 12 BAC RP11-101P14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 132604 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 acaggaagcagcaaggaaca 411 |||||||||||||||||||| Sbjct: 68182 acaggaagcagcaaggaaca 68201
>gb|AC161756.3| Mus musculus BAC clone RP24-106J5 from chromosome 16, complete sequence Length = 219500 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 389 cttacaggaagcagcaaggaacag 412 ||||||||||||||||||| |||| Sbjct: 7660 cttacaggaagcagcaaggcacag 7683
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 125 cttgctgaggaggatcctgatgag 148 ||||||||||||||| |||||||| Sbjct: 22776885 cttgctgaggaggatgctgatgag 22776862
>gb|AC140379.3| Mus musculus BAC clone RP24-215M3 from chromosome 10, complete sequence Length = 141034 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 gatgagtacagcaacaaaga 162 |||||||||||||||||||| Sbjct: 140019 gatgagtacagcaacaaaga 140038
>dbj|AP004615.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0414C05 Length = 123105 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 cattgaagatgcaacaaaca 275 |||||||||||||||||||| Sbjct: 117488 cattgaagatgcaacaaaca 117507
>dbj|AP003609.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0012B02 Length = 149807 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 cattgaagatgcaacaaaca 275 |||||||||||||||||||| Sbjct: 4331 cattgaagatgcaacaaaca 4350
>gb|AC155307.2| Mus musculus BAC clone RP24-147F17 from 15, complete sequence Length = 190527 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 368 gggcagaaggacatcttctacctt 391 ||||||||| |||||||||||||| Sbjct: 91737 gggcagaagaacatcttctacctt 91714
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 125 cttgctgaggaggatcctgatgag 148 ||||||||||||||| |||||||| Sbjct: 22705076 cttgctgaggaggatgctgatgag 22705053
>emb|AL928745.3|CNS08CBI Oryza sativa chromosome 12, . BAC OSJNBb0092G12 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131603 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 125 cttgctgaggaggatcctgatgag 148 ||||||||||||||| |||||||| Sbjct: 88735 cttgctgaggaggatgctgatgag 88712
>emb|AL929570.7| Mouse DNA sequence from clone RP23-74G9 on chromosome 2, complete sequence Length = 230193 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 gatgagtatatttcaaggat 360 |||||||||||||||||||| Sbjct: 30302 gatgagtatatttcaaggat 30283 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,593,539 Number of Sequences: 3902068 Number of extensions: 5593539 Number of successful extensions: 118653 Number of sequences better than 10.0: 66 Number of HSP's better than 10.0 without gapping: 67 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 118328 Number of HSP's gapped (non-prelim): 319 length of query: 536 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 513 effective length of database: 17,143,297,704 effective search space: 8794511722152 effective search space used: 8794511722152 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
