ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags4i02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY366476.1| Triticum aestivum plastidic alpha 1,4-glucan phosphorylase mRNA, partial cds Length = 2307 Score = 799 bits (403), Expect = 0.0 Identities = 436/447 (97%) Strand = Plus / Plus Query: 3 caatcatttcaaaatggataggctctgatgactggatcctgaacactgataaacttgcag 62 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 968 caatcatttcaaaatggataggctctgatgactggattctgaacactgataaacttgcag 1027 Query: 63 gactgaagaagtttgctgatgatgaggatctacaatcagaatggcgtactgctaaaagga 122 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1028 gactgaagaagtttgctgatgatgaggatctgcaatcagaatggcgtactgctaaaagga 1087 Query: 123 ataacaagatgaaggtagtttcgctgataagagacaagactggatatattgtcagcccag 182 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1088 ataacaagatgaaggtagtttcgctgataagagacaagactggatatgttgtcagcccag 1147 Query: 183 atgcgatgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagctgctaaata 242 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1148 atgcgatgtttgatgtgcaggtgaaaagaatacatgaatataagcggcagctgctaaata 1207 Query: 243 tccttggtatcgtttaccgctacaagaagatgaaagaaatgagtgcaaaagatagaagaa 302 ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| || Sbjct: 1208 tccttggtatcgtttaccgatacaagaagatgaaagaaatgagtgccaaagatagaataa 1267 Query: 303 agagctttgttccaagggtatgcatatttggtgggaaagcttttgccacttacgtgcagg 362 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1268 agagctttgttccaagggtatgcatatttggtgggaaagcttttgccacttacgtacagg 1327 Query: 363 caaagaggattgtgaagtttatcacagatgttgcagctactgtaaattatgatcctgata 422 ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 1328 caaagaggattgtgaagtttatcacagatgtcgcagctactgtaaattatgaccctgatg 1387 Query: 423 ttggagatttactgaaggttgtatttg 449 ||||||||||||||||||||||||||| Sbjct: 1388 ttggagatttactgaaggttgtatttg 1414
>gb|AY357118.1| Triticum aestivum plastidic alpha 1,4-glucan phosphorylase mRNA, partial cds; nuclear gene for plastid product Length = 2834 Score = 799 bits (403), Expect = 0.0 Identities = 436/447 (97%) Strand = Plus / Plus Query: 3 caatcatttcaaaatggataggctctgatgactggatcctgaacactgataaacttgcag 62 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1496 caatcatttcaaaatggataggctctgatgactggattctgaacactgataaacttgcag 1555 Query: 63 gactgaagaagtttgctgatgatgaggatctacaatcagaatggcgtactgctaaaagga 122 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1556 gactgaagaagtttgctgatgatgaggatctgcaatcagaatggcgtactgctaaaagga 1615 Query: 123 ataacaagatgaaggtagtttcgctgataagagacaagactggatatattgtcagcccag 182 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1616 ataacaagatgaaggtagtttcgctgataagagacaagactggatatgttgtcagcccag 1675 Query: 183 atgcgatgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagctgctaaata 242 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1676 atgcgatgtttgatgtgcaggtgaaaagaatacatgaatataagcggcagctgctaaata 1735 Query: 243 tccttggtatcgtttaccgctacaagaagatgaaagaaatgagtgcaaaagatagaagaa 302 ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| || Sbjct: 1736 tccttggtatcgtttaccgatacaagaagatgaaagaaatgagtgccaaagatagaataa 1795 Query: 303 agagctttgttccaagggtatgcatatttggtgggaaagcttttgccacttacgtgcagg 362 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1796 agagctttgttccaagggtatgcatatttggtgggaaagcttttgccacttacgtacagg 1855 Query: 363 caaagaggattgtgaagtttatcacagatgttgcagctactgtaaattatgatcctgata 422 ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 1856 caaagaggattgtgaagtttatcacagatgtcgcagctactgtaaattatgaccctgatg 1915 Query: 423 ttggagatttactgaaggttgtatttg 449 ||||||||||||||||||||||||||| Sbjct: 1916 ttggagatttactgaaggttgtatttg 1942
>gb|AY366474.1| Triticum aestivum plastidic alpha 1,4-glucan phosphorylase 2 mRNA, partial cds Length = 1683 Score = 795 bits (401), Expect = 0.0 Identities = 437/449 (97%) Strand = Plus / Plus Query: 1 tacaatcatttcaaaatggataggctctgatgactggatcctgaacactgataaacttgc 60 |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 354 tacaataatttcaaaatggataggctctgatgactggattctgaacactgataaacttgc 413 Query: 61 aggactgaagaagtttgctgatgatgaggatctacaatcagaatggcgtactgctaaaag 120 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 414 aggactgaagaagtttgctgatgatgaggatctgcaatcagaatggcgtactgctaaaag 473 Query: 121 gaataacaagatgaaggtagtttcgctgataagagacaagactggatatattgtcagccc 180 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 474 gaataacaagatgaaggtagtttcgctgataagagacaagactggatatgttgtcagccc 533 Query: 181 agatgcgatgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagctgctaaa 240 |||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 534 agatgcaatgtttgatgtgcaggtgaaaagaatacatgaatataagcggcagcttctaaa 593 Query: 241 tatccttggtatcgtttaccgctacaagaagatgaaagaaatgagtgcaaaagatagaag 300 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 594 tatccttggtatcatttaccgctacaagaagatgaaagaaatgagtgcaaaagatagaat 653 Query: 301 aaagagctttgttccaagggtatgcatatttggtgggaaagcttttgccacttacgtgca 360 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 654 aaagagctttgttccaagggtatgcatatttggcgggaaagcttttgccacttacgtgca 713 Query: 361 ggcaaagaggattgtgaagtttatcacagatgttgcagctactgtaaattatgatcctga 420 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 714 ggcaaagaggattgtgaagtttatcacagatgtcgcagctactgtaaattatgatcctga 773 Query: 421 tattggagatttactgaaggttgtatttg 449 |||||||||| |||||||||||||||||| Sbjct: 774 tattggagatctactgaaggttgtatttg 802
>gb|AY366475.1| Triticum aestivum plastidic alpha 1,4-glucan phosphorylase 3 mRNA, partial cds Length = 1983 Score = 783 bits (395), Expect = 0.0 Identities = 434/447 (97%) Strand = Plus / Plus Query: 3 caatcatttcaaaatggataggctctgatgactggatcctgaacactgataaacttgcag 62 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 620 caatcatttcaaaatggataggctctgatgactggattctgaacactgataaacttgcag 679 Query: 63 gactgaagaagtttgctgatgatgaggatctacaatcagaatggcgtactgctaaaagga 122 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 680 gactgaagaagtttgctgatgatgaggatctgcaatcagaatggcgtactgctaaaagga 739 Query: 123 ataacaagatgaaggtagtttcgctgataagagacaagactggatatattgtcagcccag 182 ||||||||||||| |||||||| ||||||||||| |||||||||||| | |||||||||| Sbjct: 740 ataacaagatgaaagtagtttcactgataagagataagactggatatgtggtcagcccag 799 Query: 183 atgcgatgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagctgctaaata 242 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 800 atgcgatgtttgatgtgcaggtgaaaagaatacatgaatataagcggcagctgctaaata 859 Query: 243 tccttggtatcgtttaccgctacaagaagatgaaagaaatgagtgcaaaagatagaagaa 302 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 860 tccttggtatcgtttaccggtacaagaagatgaaagaaatgagtgcaaaagatagaataa 919 Query: 303 agagctttgttccaagggtatgcatatttggtgggaaagcttttgccacttacgtgcagg 362 |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| Sbjct: 920 agagctttgttccaagggtatgcatatttggtgggaaagcttttgccacttatgtacagg 979 Query: 363 caaagaggattgtgaagtttatcacagatgttgcagctactgtaaattatgatcctgata 422 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 980 caaagaggattgtgaagtttatcacagatgtcgcagctactgtaaattatgatcctgata 1039 Query: 423 ttggagatttactgaaggttgtatttg 449 ||||||||||||||||||||||||||| Sbjct: 1040 ttggagatttactgaaggttgtatttg 1066
>ref|XM_469836.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3133 Score = 535 bits (270), Expect = e-149 Identities = 402/446 (90%) Strand = Plus / Plus Query: 3 caatcatttcaaaatggataggctctgatgactggatcctgaacactgataaacttgcag 62 |||||||||||||||||||||| |||||||| ||| | ||||||||||||||||||| | Sbjct: 1838 caatcatttcaaaatggataggatctgatgattgggttttgaacactgataaacttgctg 1897 Query: 63 gactgaagaagtttgctgatgatgaggatctacaatcagaatggcgtactgctaaaagga 122 | | |||||||||||||||||||||||||| ||||||||||||||| ||||||||| | Sbjct: 1898 aattaaagaagtttgctgatgatgaggatctgcaatcagaatggcgtgctgctaaaaagg 1957 Query: 123 ataacaagatgaaggtagtttcgctgataagagacaagactggatatattgtcagcccag 182 ||||||| ||||||| ||||| || |||||||| || || |||||||| ||||| |||| Sbjct: 1958 ctaacaaggtgaaggttgtttctctcataagagaaaaaacaggatatatcgtcagtccag 2017 Query: 183 atgcgatgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagctgctaaata 242 |||| |||||||| || ||||||||||| || |||||||||||||| ||||||||||||| Sbjct: 2018 atgcaatgtttgacgttcaggtgaaaaggatccatgagtataagcgacagctgctaaata 2077 Query: 243 tccttggtatcgtttaccgctacaagaagatgaaagaaatgagtgcaaaagatagaagaa 302 ||||||| || || |||||||||||||||||||||||||||||||||||||| |||| || Sbjct: 2078 tccttggaattgtctaccgctacaagaagatgaaagaaatgagtgcaaaagacagaataa 2137 Query: 303 agagctttgttccaagggtatgcatatttggtgggaaagcttttgccacttacgtgcagg 362 | |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 2138 atagctttgttccaagggtatgcatatttggtgggaaagcatttgccacttacgtacagg 2197 Query: 363 caaagaggattgtgaagtttatcacagatgttgcagctactgtaaattatgatcctgata 422 |||||||||| ||||||||||| |||||||||||||||||||||||| ||||||| || | Sbjct: 2198 caaagaggatagtgaagtttattacagatgttgcagctactgtaaatcatgatccagaaa 2257 Query: 423 ttggagatttactgaaggttgtattt 448 |||||||| || |||||||||||||| Sbjct: 2258 ttggagatctattgaaggttgtattt 2283
>gb|AF327055.1|AF327055 Oryza sativa alpha 1,4-glucan phosphorylase L isozyme mRNA, partial cds Length = 3141 Score = 535 bits (270), Expect = e-149 Identities = 402/446 (90%) Strand = Plus / Plus Query: 3 caatcatttcaaaatggataggctctgatgactggatcctgaacactgataaacttgcag 62 |||||||||||||||||||||| |||||||| ||| | ||||||||||||||||||| | Sbjct: 1770 caatcatttcaaaatggataggatctgatgattgggttttgaacactgataaacttgctg 1829 Query: 63 gactgaagaagtttgctgatgatgaggatctacaatcagaatggcgtactgctaaaagga 122 | | |||||||||||||||||||||||||| ||||||||||||||| ||||||||| | Sbjct: 1830 aattaaagaagtttgctgatgatgaggatctgcaatcagaatggcgtgctgctaaaaagg 1889 Query: 123 ataacaagatgaaggtagtttcgctgataagagacaagactggatatattgtcagcccag 182 ||||||| ||||||| ||||| || |||||||| || || |||||||| ||||| |||| Sbjct: 1890 ctaacaaggtgaaggttgtttctctcataagagaaaaaacaggatatatcgtcagtccag 1949 Query: 183 atgcgatgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagctgctaaata 242 |||| |||||||| || ||||||||||| || |||||||||||||| ||||||||||||| Sbjct: 1950 atgcaatgtttgacgttcaggtgaaaaggatccatgagtataagcgacagctgctaaata 2009 Query: 243 tccttggtatcgtttaccgctacaagaagatgaaagaaatgagtgcaaaagatagaagaa 302 ||||||| || || |||||||||||||||||||||||||||||||||||||| |||| || Sbjct: 2010 tccttggaattgtctaccgctacaagaagatgaaagaaatgagtgcaaaagacagaataa 2069 Query: 303 agagctttgttccaagggtatgcatatttggtgggaaagcttttgccacttacgtgcagg 362 | |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 2070 atagctttgttccaagggtatgcatatttggtgggaaagcatttgccacttacgtacagg 2129 Query: 363 caaagaggattgtgaagtttatcacagatgttgcagctactgtaaattatgatcctgata 422 |||||||||| ||||||||||| |||||||||||||||||||||||| ||||||| || | Sbjct: 2130 caaagaggatagtgaagtttattacagatgttgcagctactgtaaatcatgatccagaaa 2189 Query: 423 ttggagatttactgaaggttgtattt 448 |||||||| || |||||||||||||| Sbjct: 2190 ttggagatctattgaaggttgtattt 2215
>dbj|AK063766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B07, full insert sequence Length = 3049 Score = 535 bits (270), Expect = e-149 Identities = 402/446 (90%) Strand = Plus / Plus Query: 3 caatcatttcaaaatggataggctctgatgactggatcctgaacactgataaacttgcag 62 |||||||||||||||||||||| |||||||| ||| | ||||||||||||||||||| | Sbjct: 1668 caatcatttcaaaatggataggatctgatgattgggttttgaacactgataaacttgctg 1727 Query: 63 gactgaagaagtttgctgatgatgaggatctacaatcagaatggcgtactgctaaaagga 122 | | |||||||||||||||||||||||||| ||||||||||||||| ||||||||| | Sbjct: 1728 aattaaagaagtttgctgatgatgaggatctgcaatcagaatggcgtgctgctaaaaagg 1787 Query: 123 ataacaagatgaaggtagtttcgctgataagagacaagactggatatattgtcagcccag 182 ||||||| ||||||| ||||| || |||||||| || || |||||||| ||||| |||| Sbjct: 1788 ctaacaaggtgaaggttgtttctctcataagagaaaaaacaggatatatcgtcagtccag 1847 Query: 183 atgcgatgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagctgctaaata 242 |||| |||||||| || ||||||||||| || |||||||||||||| ||||||||||||| Sbjct: 1848 atgcaatgtttgacgttcaggtgaaaaggatccatgagtataagcgacagctgctaaata 1907 Query: 243 tccttggtatcgtttaccgctacaagaagatgaaagaaatgagtgcaaaagatagaagaa 302 ||||||| || || |||||||||||||||||||||||||||||||||||||| |||| || Sbjct: 1908 tccttggaattgtctaccgctacaagaagatgaaagaaatgagtgcaaaagacagaataa 1967 Query: 303 agagctttgttccaagggtatgcatatttggtgggaaagcttttgccacttacgtgcagg 362 | |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 1968 atagctttgttccaagggtatgcatatttggtgggaaagcatttgccacttacgtacagg 2027 Query: 363 caaagaggattgtgaagtttatcacagatgttgcagctactgtaaattatgatcctgata 422 |||||||||| ||||||||||| |||||||||||||||||||||||| ||||||| || | Sbjct: 2028 caaagaggatagtgaagtttattacagatgttgcagctactgtaaatcatgatccagaaa 2087 Query: 423 ttggagatttactgaaggttgtattt 448 |||||||| || |||||||||||||| Sbjct: 2088 ttggagatctattgaaggttgtattt 2113
>gb|AY106211.1| Zea mays PCO070449 mRNA sequence Length = 2149 Score = 377 bits (190), Expect = e-101 Identities = 379/442 (85%) Strand = Plus / Plus Query: 8 atttcaaaatggataggctctgatgactggatcctgaacactgataaacttgcaggactg 67 |||||||| ||||| || |||||||||||| | || || || || ||||| |||| |||| Sbjct: 778 atttcaaagtggattggttctgatgactgggtgcttaatacagacaaactggcagaactg 837 Query: 68 aagaagtttgctgatgatgaggatctacaatcagaatggcgtactgctaaaaggaataac 127 ||||||||||||||| |||| ||||| || ||||| |||||| ||||||| | | |||| Sbjct: 838 aagaagtttgctgataatgaagatctgcattcagagtggcgtgctgctaagaaggctaac 897 Query: 128 aagatgaaggtagtttcgctgataagagacaagactggatatattgtcagcccagatgcg 187 || |||||||| ||||| || ||||| || ||||| |||||||||||||| |||||||| Sbjct: 898 aaaatgaaggttgtttctcttataagggagaagacaggatatattgtcagtccagatgca 957 Query: 188 atgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagctgctaaatatcctt 247 ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 958 atgtttgatgtgcaggtgaaaaggatacatgaatataagcggcagctgctaaatatcctt 1017 Query: 248 ggtatcgtttaccgctacaagaagatgaaagaaatgagtgcaaaagatagaagaaagagc 307 || || || ||||||||||||||||||||||||||||| || |||| ||| ||||||| Sbjct: 1018 ggaattgtctaccgctacaagaagatgaaagaaatgagcacagaagaaagagcaaagagc 1077 Query: 308 tttgttccaagggtatgcatatttggtgggaaagcttttgccacttacgtgcaggcaaag 367 ||||||||||||||||||||||| ||||||||||| |||||||| || | |||||||| Sbjct: 1078 tttgttccaagggtatgcatattcggtgggaaagcatttgccacatatatacaggcaaaa 1137 Query: 368 aggattgtgaagtttatcacagatgttgcagctactgtaaattatgatcctgatattgga 427 ||||| || || ||||| |||||||| |||||||| || || ||||| | || |||||| Sbjct: 1138 aggatcgttaaatttattacagatgtggcagctaccgtgaaccatgattcagacattgga 1197 Query: 428 gatttactgaaggttgtatttg 449 ||||| ||||||| ||||||| Sbjct: 1198 gatttgttgaaggtcgtatttg 1219
>gb|BT018213.1| Zea mays clone EL01N0561A02.c mRNA sequence Length = 1470 Score = 369 bits (186), Expect = 5e-99 Identities = 378/442 (85%) Strand = Plus / Plus Query: 8 atttcaaaatggataggctctgatgactggatcctgaacactgataaacttgcaggactg 67 |||||||| ||||| || |||||||||||| | || || || || ||||| |||| |||| Sbjct: 132 atttcaaagtggattggttctgatgactgggtgcttaatacagacaaactggcagaactg 191 Query: 68 aagaagtttgctgatgatgaggatctacaatcagaatggcgtactgctaaaaggaataac 127 ||||||||||||||| |||| ||||| || ||||| |||||| ||||||| | | |||| Sbjct: 192 aagaagtttgctgataatgaagatctgcattcagagtggcgtgctgctaagaaggctaac 251 Query: 128 aagatgaaggtagtttcgctgataagagacaagactggatatattgtcagcccagatgcg 187 || |||||||| |||| || ||||| || ||||| |||||||||||||| |||||||| Sbjct: 252 aaaatgaaggttatttctcttataagggagaagacaggatatattgtcagtccagatgca 311 Query: 188 atgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagctgctaaatatcctt 247 ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 312 atgtttgatgtgcaggtgaaaaggatacatgaatataagcggcagctgctaaatatcctt 371 Query: 248 ggtatcgtttaccgctacaagaagatgaaagaaatgagtgcaaaagatagaagaaagagc 307 || || || ||||||||||||||||||||||||||||| || |||| ||| ||||||| Sbjct: 372 ggaattgtctaccgctacaagaagatgaaagaaatgagcacagaagaaagagcaaagagc 431 Query: 308 tttgttccaagggtatgcatatttggtgggaaagcttttgccacttacgtgcaggcaaag 367 ||||||||||||||||||||||| ||||||||||| |||||||| || | |||||||| Sbjct: 432 tttgttccaagggtatgcatattcggtgggaaagcatttgccacatatatacaggcaaaa 491 Query: 368 aggattgtgaagtttatcacagatgttgcagctactgtaaattatgatcctgatattgga 427 ||||| || || ||||| |||||||| |||||||| || || ||||| | || |||||| Sbjct: 492 aggatcgttaaatttattacagatgtggcagctaccgtgaaccatgattcagacattgga 551 Query: 428 gatttactgaaggttgtatttg 449 ||||| ||||||| ||||||| Sbjct: 552 gatttgttgaaggtcgtatttg 573
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 337 bits (170), Expect = 2e-89 Identities = 224/242 (92%) Strand = Plus / Minus Query: 200 caggtgaaaagaatacatgagtataagcggcagctgctaaatatccttggtatcgtttac 259 ||||||||||| || |||||||||||||| |||||||||||||||||||| || || ||| Sbjct: 31030454 caggtgaaaaggatccatgagtataagcgacagctgctaaatatccttggaattgtctac 31030395 Query: 260 cgctacaagaagatgaaagaaatgagtgcaaaagatagaagaaagagctttgttccaagg 319 ||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||| Sbjct: 31030394 cgctacaagaagatgaaagaaatgagtgcaaaagacagaataaatagctttgttccaagg 31030335 Query: 320 gtatgcatatttggtgggaaagcttttgccacttacgtgcaggcaaagaggattgtgaag 379 ||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||| Sbjct: 31030334 gtatgcatatttggtgggaaagcatttgccacttacgtacaggcaaagaggatagtgaag 31030275 Query: 380 tttatcacagatgttgcagctactgtaaattatgatcctgatattggagatttactgaag 439 ||||| |||||||||||||||||||||||| ||||||| || ||||||||| || ||||| Sbjct: 31030274 tttattacagatgttgcagctactgtaaatcatgatccagaaattggagatctattgaag 31030215 Query: 440 gt 441 || Sbjct: 31030214 gt 31030213 Score = 129 bits (65), Expect = 8e-27 Identities = 116/133 (87%) Strand = Plus / Minus Query: 72 agtttgctgatgatgaggatctacaatcagaatggcgtactgctaaaaggaataacaaga 131 |||||||||||||||||||||| ||||||||||||||| ||||||||| | ||||||| Sbjct: 31030654 agtttgctgatgatgaggatctgcaatcagaatggcgtgctgctaaaaaggctaacaagg 31030595 Query: 132 tgaaggtagtttcgctgataagagacaagactggatatattgtcagcccagatgcgatgt 191 ||||||| ||||| || |||||||| || || |||||||| ||||| |||||||| |||| Sbjct: 31030594 tgaaggttgtttctctcataagagaaaaaacaggatatatcgtcagtccagatgcaatgt 31030535 Query: 192 ttgatgtgcaggt 204 |||| || ||||| Sbjct: 31030534 ttgacgttcaggt 31030522 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Minus Query: 3 caatcatttcaaaatggataggctctgatgactggatcctgaacactgataaacttgc 60 |||||||||||||||||||||| |||||||| ||| | ||||||||||||||||||| Sbjct: 31030874 caatcatttcaaaatggataggatctgatgattgggttttgaacactgataaacttgc 31030817
>gb|AC079887.17| Oryza sativa (japonica cultivar-group) chromosome 3 BAC OSJNBa0040E01 genomic sequence, complete sequence Length = 168759 Score = 337 bits (170), Expect = 2e-89 Identities = 224/242 (92%) Strand = Plus / Plus Query: 200 caggtgaaaagaatacatgagtataagcggcagctgctaaatatccttggtatcgtttac 259 ||||||||||| || |||||||||||||| |||||||||||||||||||| || || ||| Sbjct: 65610 caggtgaaaaggatccatgagtataagcgacagctgctaaatatccttggaattgtctac 65669 Query: 260 cgctacaagaagatgaaagaaatgagtgcaaaagatagaagaaagagctttgttccaagg 319 ||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||| Sbjct: 65670 cgctacaagaagatgaaagaaatgagtgcaaaagacagaataaatagctttgttccaagg 65729 Query: 320 gtatgcatatttggtgggaaagcttttgccacttacgtgcaggcaaagaggattgtgaag 379 ||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||| Sbjct: 65730 gtatgcatatttggtgggaaagcatttgccacttacgtacaggcaaagaggatagtgaag 65789 Query: 380 tttatcacagatgttgcagctactgtaaattatgatcctgatattggagatttactgaag 439 ||||| |||||||||||||||||||||||| ||||||| || ||||||||| || ||||| Sbjct: 65790 tttattacagatgttgcagctactgtaaatcatgatccagaaattggagatctattgaag 65849 Query: 440 gt 441 || Sbjct: 65850 gt 65851 Score = 129 bits (65), Expect = 8e-27 Identities = 116/133 (87%) Strand = Plus / Plus Query: 72 agtttgctgatgatgaggatctacaatcagaatggcgtactgctaaaaggaataacaaga 131 |||||||||||||||||||||| ||||||||||||||| ||||||||| | ||||||| Sbjct: 65410 agtttgctgatgatgaggatctgcaatcagaatggcgtgctgctaaaaaggctaacaagg 65469 Query: 132 tgaaggtagtttcgctgataagagacaagactggatatattgtcagcccagatgcgatgt 191 ||||||| ||||| || |||||||| || || |||||||| ||||| |||||||| |||| Sbjct: 65470 tgaaggttgtttctctcataagagaaaaaacaggatatatcgtcagtccagatgcaatgt 65529 Query: 192 ttgatgtgcaggt 204 |||| || ||||| Sbjct: 65530 ttgacgttcaggt 65542 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Plus Query: 3 caatcatttcaaaatggataggctctgatgactggatcctgaacactgataaacttgc 60 |||||||||||||||||||||| |||||||| ||| | ||||||||||||||||||| Sbjct: 65190 caatcatttcaaaatggataggatctgatgattgggttttgaacactgataaacttgc 65247
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 337 bits (170), Expect = 2e-89 Identities = 224/242 (92%) Strand = Plus / Minus Query: 200 caggtgaaaagaatacatgagtataagcggcagctgctaaatatccttggtatcgtttac 259 ||||||||||| || |||||||||||||| |||||||||||||||||||| || || ||| Sbjct: 31120977 caggtgaaaaggatccatgagtataagcgacagctgctaaatatccttggaattgtctac 31120918 Query: 260 cgctacaagaagatgaaagaaatgagtgcaaaagatagaagaaagagctttgttccaagg 319 ||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||| Sbjct: 31120917 cgctacaagaagatgaaagaaatgagtgcaaaagacagaataaatagctttgttccaagg 31120858 Query: 320 gtatgcatatttggtgggaaagcttttgccacttacgtgcaggcaaagaggattgtgaag 379 ||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||| Sbjct: 31120857 gtatgcatatttggtgggaaagcatttgccacttacgtacaggcaaagaggatagtgaag 31120798 Query: 380 tttatcacagatgttgcagctactgtaaattatgatcctgatattggagatttactgaag 439 ||||| |||||||||||||||||||||||| ||||||| || ||||||||| || ||||| Sbjct: 31120797 tttattacagatgttgcagctactgtaaatcatgatccagaaattggagatctattgaag 31120738 Query: 440 gt 441 || Sbjct: 31120737 gt 31120736 Score = 129 bits (65), Expect = 8e-27 Identities = 116/133 (87%) Strand = Plus / Minus Query: 72 agtttgctgatgatgaggatctacaatcagaatggcgtactgctaaaaggaataacaaga 131 |||||||||||||||||||||| ||||||||||||||| ||||||||| | ||||||| Sbjct: 31121177 agtttgctgatgatgaggatctgcaatcagaatggcgtgctgctaaaaaggctaacaagg 31121118 Query: 132 tgaaggtagtttcgctgataagagacaagactggatatattgtcagcccagatgcgatgt 191 ||||||| ||||| || |||||||| || || |||||||| ||||| |||||||| |||| Sbjct: 31121117 tgaaggttgtttctctcataagagaaaaaacaggatatatcgtcagtccagatgcaatgt 31121058 Query: 192 ttgatgtgcaggt 204 |||| || ||||| Sbjct: 31121057 ttgacgttcaggt 31121045 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Minus Query: 3 caatcatttcaaaatggataggctctgatgactggatcctgaacactgataaacttgc 60 |||||||||||||||||||||| |||||||| ||| | ||||||||||||||||||| Sbjct: 31121397 caatcatttcaaaatggataggatctgatgattgggttttgaacactgataaacttgc 31121340
>ref|NM_113857.2| Arabidopsis thaliana phosphorylase/ transferase, transferring glycosyl groups AT3G29320 mRNA, complete cds Length = 3165 Score = 129 bits (65), Expect = 8e-27 Identities = 196/237 (82%), Gaps = 2/237 (0%) Strand = Plus / Plus Query: 161 actggatatattgtcagcccagatgcgatgtttgatgtgcaggtgaaaagaatacatgag 220 |||||||||| ||||||||| ||||| ||||| || | ||| | || | ||||||||| Sbjct: 2078 actggatatactgtcagccccgatgcaatgttcgacattcagatcaagcgtatacatgag 2137 Query: 221 tataagcggcagctgctaaatatccttggtatcgtttaccgctacaagaagatgaaagaa 280 || ||||| || |||||||||||| | || || |||||||||||||| |||||||| ||| Sbjct: 2138 tacaagcgacaactgctaaatatcttgggaattgtttaccgctacaaaaagatgaaggaa 2197 Query: 281 atgagtgcaaaagatagaagaaagagc-tttgttccaagggtatgcatatttggtgggaa 339 |||||||| | || ||| || | ||| ||||||||||| || ||||||||||| || || Sbjct: 2198 atgagtgctagtgagaga-gagaaagcatttgttccaagagtttgcatatttgggggaaa 2256 Query: 340 agcttttgccacttacgtgcaggcaaagaggattgtgaagtttatcacagatgttgc 396 ||| |||||||| || ||||| || ||||| ||||| || ||||||||||||||||| Sbjct: 2257 agcatttgccacatatgtgcaagctaagagaattgttaaatttatcacagatgttgc 2313
>gb|AY049235.1| Arabidopsis thaliana AT3g29320/MUO10_2 mRNA, complete cds Length = 3114 Score = 129 bits (65), Expect = 8e-27 Identities = 196/237 (82%), Gaps = 2/237 (0%) Strand = Plus / Plus Query: 161 actggatatattgtcagcccagatgcgatgtttgatgtgcaggtgaaaagaatacatgag 220 |||||||||| ||||||||| ||||| ||||| || | ||| | || | ||||||||| Sbjct: 2078 actggatatactgtcagccccgatgcaatgttcgacattcagatcaagcgtatacatgag 2137 Query: 221 tataagcggcagctgctaaatatccttggtatcgtttaccgctacaagaagatgaaagaa 280 || ||||| || |||||||||||| | || || |||||||||||||| |||||||| ||| Sbjct: 2138 tacaagcgacaactgctaaatatcttgggaattgtttaccgctacaaaaagatgaaggaa 2197 Query: 281 atgagtgcaaaagatagaagaaagagc-tttgttccaagggtatgcatatttggtgggaa 339 |||||||| | || ||| || | ||| ||||||||||| || ||||||||||| || || Sbjct: 2198 atgagtgctagtgagaga-gagaaagcatttgttccaagagtttgcatatttgggggaaa 2256 Query: 340 agcttttgccacttacgtgcaggcaaagaggattgtgaagtttatcacagatgttgc 396 ||| |||||||| || ||||| || ||||| ||||| || ||||||||||||||||| Sbjct: 2257 agcatttgccacatatgtgcaagctaagagaattgttaaatttatcacagatgttgc 2313
>gb|BT003015.1| Arabidopsis thaliana At3g29320/MUO10_2 gene, complete cds Length = 2889 Score = 129 bits (65), Expect = 8e-27 Identities = 196/237 (82%), Gaps = 2/237 (0%) Strand = Plus / Plus Query: 161 actggatatattgtcagcccagatgcgatgtttgatgtgcaggtgaaaagaatacatgag 220 |||||||||| ||||||||| ||||| ||||| || | ||| | || | ||||||||| Sbjct: 2029 actggatatactgtcagccccgatgcaatgttcgacattcagatcaagcgtatacatgag 2088 Query: 221 tataagcggcagctgctaaatatccttggtatcgtttaccgctacaagaagatgaaagaa 280 || ||||| || |||||||||||| | || || |||||||||||||| |||||||| ||| Sbjct: 2089 tacaagcgacaactgctaaatatcttgggaattgtttaccgctacaaaaagatgaaggaa 2148 Query: 281 atgagtgcaaaagatagaagaaagagc-tttgttccaagggtatgcatatttggtgggaa 339 |||||||| | || ||| || | ||| ||||||||||| || ||||||||||| || || Sbjct: 2149 atgagtgctagtgagaga-gagaaagcatttgttccaagagtttgcatatttgggggaaa 2207 Query: 340 agcttttgccacttacgtgcaggcaaagaggattgtgaagtttatcacagatgttgc 396 ||| |||||||| || ||||| || ||||| ||||| || ||||||||||||||||| Sbjct: 2208 agcatttgccacatatgtgcaagctaagagaattgttaaatttatcacagatgttgc 2264
>emb|X52385.1|STSTARCH Potato mRNA for starch phosphorylase Length = 4942 Score = 127 bits (64), Expect = 3e-26 Identities = 196/240 (81%) Strand = Plus / Plus Query: 178 cccagatgcgatgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagctgct 237 ||||||||| ||||||||| | ||||| ||| | || |||||||| ||||| || ||| | Sbjct: 3960 cccagatgcaatgtttgatattcaggtaaaacgcattcatgagtacaagcgacaactgtt 4019 Query: 238 aaatatccttggtatcgtttaccgctacaagaagatgaaagaaatgagtgcaaaagatag 297 ||||||| | || |||||||| || || ||||||||||||||||||| || ||| || Sbjct: 4020 aaatatcttcggcatcgtttatcggtataagaagatgaaagaaatgacagctgcagaaag 4079 Query: 298 aagaaagagctttgttccaagggtatgcatatttggtgggaaagcttttgccacttacgt 357 || | | ||| ||||| | |||||||||||||| || |||||||||||||| || || Sbjct: 4080 aaagactaacttcgttcctcgagtatgcatatttgggggaaaagcttttgccacatatgt 4139 Query: 358 gcaggcaaagaggattgtgaagtttatcacagatgttgcagctactgtaaattatgatcc 417 ||| || ||||||||||| || |||||||||||||||| |||||| ||||| ||||||| Sbjct: 4140 gcaagccaagaggattgtaaaatttatcacagatgttggtgctactataaatcatgatcc 4199
>dbj|D00520.1|POTGP Solanum tuberosum mRNA for alpha-glucan phosphorylase precursor, complete cds Length = 3101 Score = 127 bits (64), Expect = 3e-26 Identities = 196/240 (81%) Strand = Plus / Plus Query: 178 cccagatgcgatgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagctgct 237 ||||||||| ||||||||| | ||||| ||| | || |||||||| ||||| || ||| | Sbjct: 2101 cccagatgcaatgtttgatattcaggtaaaacgcattcatgagtacaagcgacaactgtt 2160 Query: 238 aaatatccttggtatcgtttaccgctacaagaagatgaaagaaatgagtgcaaaagatag 297 ||||||| | || |||||||| || || ||||||||||||||||||| || ||| || Sbjct: 2161 aaatatcttcggcatcgtttatcggtataagaagatgaaagaaatgacagctgcagaaag 2220 Query: 298 aagaaagagctttgttccaagggtatgcatatttggtgggaaagcttttgccacttacgt 357 || | | ||| ||||| | |||||||||||||| || |||||||||||||| || || Sbjct: 2221 aaagactaacttcgttcctcgagtatgcatatttgggggaaaagcttttgccacatatgt 2280 Query: 358 gcaggcaaagaggattgtgaagtttatcacagatgttgcagctactgtaaattatgatcc 417 ||| || ||||||||||| || |||||||||||||||| |||||| ||||| ||||||| Sbjct: 2281 gcaagccaagaggattgtaaaatttatcacagatgttggtgctactataaatcatgatcc 2340
>gb|DQ021468.1| Nicotiana langsdorffii x Nicotiana sanderae clone 204C12 starch phosphorylase (PHO1) mRNA, partial cds Length = 249 Score = 123 bits (62), Expect = 5e-25 Identities = 107/122 (87%) Strand = Plus / Plus Query: 320 gtatgcatatttggtgggaaagcttttgccacttacgtgcaggcaaagaggattgtgaag 379 |||||||||||||| || |||||||||||||| || ||||| || ||||||||||||||| Sbjct: 60 gtatgcatatttggaggaaaagcttttgccacatatgtgcaagcgaagaggattgtgaag 119 Query: 380 tttatcacagatgttgcagctactgtaaattatgatcctgatattggagatttactgaag 439 |||||||||||||||| |||||| ||||| ||||||| || || || |||||| ||||| Sbjct: 120 tttatcacagatgttggcgctactataaatcatgatccagaaataggtgatttattgaag 179 Query: 440 gt 441 || Sbjct: 180 gt 181
>dbj|AP001309.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MUO10 Length = 77589 Score = 123 bits (62), Expect = 5e-25 Identities = 157/186 (84%), Gaps = 2/186 (1%) Strand = Plus / Plus Query: 212 atacatgagtataagcggcagctgctaaatatccttggtatcgtttaccgctacaagaag 271 ||||||||||| ||||| || |||||||||||| | || || |||||||||||||| ||| Sbjct: 5860 atacatgagtacaagcgacaactgctaaatatcttgggaattgtttaccgctacaaaaag 5919 Query: 272 atgaaagaaatgagtgcaaaagatagaagaaagagc-tttgttccaagggtatgcatatt 330 ||||| ||||||||||| | || ||| || | ||| ||||||||||| || |||||||| Sbjct: 5920 atgaaggaaatgagtgctagtgagaga-gagaaagcatttgttccaagagtttgcatatt 5978 Query: 331 tggtgggaaagcttttgccacttacgtgcaggcaaagaggattgtgaagtttatcacaga 390 ||| || ||||| |||||||| || ||||| || ||||| ||||| || ||||||||||| Sbjct: 5979 tgggggaaaagcatttgccacatatgtgcaagctaagagaattgttaaatttatcacaga 6038 Query: 391 tgttgc 396 |||||| Sbjct: 6039 tgttgc 6044
>emb|Z36880.1|VFALGLPH Vicia faba var. minor mRNA for alpha 1,4-glucan phosphorylase L isoform precursor (VfPho1 gene) Length = 3283 Score = 117 bits (59), Expect = 3e-23 Identities = 188/231 (81%) Strand = Plus / Plus Query: 200 caggtgaaaagaatacatgagtataagcggcagctgctaaatatccttggtatcgtttac 259 |||||||||||||| ||||| ||||| || || | ||||||| |||| || ||||| Sbjct: 2248 caggtgaaaagaatccatgaatataaacgacaattattaaatatatttggaattgtttat 2307 Query: 260 cgctacaagaagatgaaagaaatgagtgcaaaagatagaagaaagagctttgttccaagg 319 ||||||||||||||||||||||||| ||| || |||| | | | ||||||||||| Sbjct: 2308 cgctacaagaagatgaaagaaatgaatgctgctgaaagaaaagaaaattttgttccaaga 2367 Query: 320 gtatgcatatttggtgggaaagcttttgccacttacgtgcaggcaaagaggattgtgaag 379 || || |||||||| || ||||| ||||| ||||| ||||| || || || |||||||| Sbjct: 2368 gtttgtatatttgggggaaaagcatttgctacttatgtgcaagccaaaagaattgtgaaa 2427 Query: 380 tttatcacagatgttgcagctactgtaaattatgatcctgatattggagat 430 ||||| |||||||||| ||||||||||||| ||||||| || || |||||| Sbjct: 2428 tttattacagatgttggagctactgtaaatcatgatccagaaataggagat 2478 Score = 54.0 bits (27), Expect = 4e-04 Identities = 96/119 (80%) Strand = Plus / Plus Query: 17 tggataggctctgatgactggatcctgaacactgataaacttgcaggactgaagaagttt 76 ||||||||| | || ||||||||||| || ||||| ||||| || | |||| ||||||| Sbjct: 2065 tggataggcacagaagactggatcctaaatactgagaaactggctgaactgcggaagttt 2124 Query: 77 gctgatgatgaggatctacaatcagaatggcgtactgctaaaaggaataacaagatgaa 135 || ||| |||||||||| ||| || ||||| | || ||||||||||||||| |||| Sbjct: 2125 gcagataatgaggatctgcaaacacaatggagggaagcaaaaaggaataacaaggtgaa 2183
>emb|X85181.1|SOSTPII S.oleracea mRNA for alpha-glucan phosphorylase Length = 3088 Score = 77.8 bits (39), Expect = 3e-11 Identities = 111/135 (82%) Strand = Plus / Plus Query: 310 tgttccaagggtatgcatatttggtgggaaagcttttgccacttacgtgcaggcaaagag 369 ||||||||| || || ||||| || || |||||||||||||| || |||||||| || || Sbjct: 2261 tgttccaagagtttgtatattcggaggaaaagcttttgccacatatgtgcaggctaaaag 2320 Query: 370 gattgtgaagtttatcacagatgttgcagctactgtaaattatgatcctgatattggaga 429 || ||||| |||||||| ||||| | |||||| | ||| | |||||||| ||||| || Sbjct: 2321 aatagtgaaatttatcactgatgtaggagctacaattaatcacgatcctgaaattggtga 2380 Query: 430 tttactgaaggttgt 444 | ||||||||||||| Sbjct: 2381 tctactgaaggttgt 2395 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Plus Query: 257 taccgctacaagaagatgaaagaaatgagtgc 288 ||||||||||| || ||||||||||||||||| Sbjct: 2208 taccgctacaaaaaaatgaaagaaatgagtgc 2239 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 173 gtcagcccagatgcgatgtttgat 196 |||||||||||||| ||||||||| Sbjct: 2124 gtcagcccagatgcaatgtttgat 2147
>emb|X73684.1|STSTP1 S.tuberosum mRNA for leaf type L starch phosphorylase Length = 3171 Score = 73.8 bits (37), Expect = 4e-10 Identities = 94/113 (83%) Strand = Plus / Plus Query: 173 gtcagcccagatgcgatgtttgatgtgcaggtgaaaagaatacatgagtataagcggcag 232 ||||| || ||||| ||||||||||| ||| | || | || ||||||||||| ||||| Sbjct: 2163 gtcagtcccgatgcaatgtttgatgttcagatcaagcgcatccatgagtataaaaggcag 2222 Query: 233 ctgctaaatatccttggtatcgtttaccgctacaagaagatgaaagaaatgag 285 || ||||||| |||| |||||||| ||||| |||||||||||||||||||| Sbjct: 2223 ctattaaatatatttggaatcgtttatcgctataagaagatgaaagaaatgag 2275 Score = 46.1 bits (23), Expect = 0.098 Identities = 59/71 (83%) Strand = Plus / Plus Query: 323 tgcatatttggtgggaaagcttttgccacttacgtgcaggcaaagaggattgtgaagttt 382 ||||||||||| || ||||| ||||| || || || ||||| ||||| ||||| || ||| Sbjct: 2313 tgcatatttggaggaaaagcatttgctacatatgttcaggccaagagaattgtaaaattt 2372 Query: 383 atcacagatgt 393 ||||| ||||| Sbjct: 2373 atcactgatgt 2383
>gb|M64362.1|IPBSPP Sweet potato starch phosphorylase mRNA, complete cds Length = 3292 Score = 58.0 bits (29), Expect = 3e-05 Identities = 92/113 (81%) Strand = Plus / Plus Query: 173 gtcagcccagatgcgatgtttgatgtgcaggtgaaaagaatacatgagtataagcggcag 232 |||||||| |||| ||||||||| | ||||| ||| |||| ||||| || ||||| || Sbjct: 2105 gtcagccccaatgcaatgtttgatatccaggtaaaacgaattcatgaatacaagcgccaa 2164 Query: 233 ctgctaaatatccttggtatcgtttaccgctacaagaagatgaaagaaatgag 285 || | |||||| | || || ||||| ||||||||| |||||||||||||||| Sbjct: 2165 ctcttgaatatcttgggaattgtttatcgctacaagcagatgaaagaaatgag 2217
>gb|AF046795.1|HSLGPG09 Homo sapiens glycogen phosphorylase (PYGL) gene, exons 14-16 Length = 1136 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 188 atgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagct 234 ||||||||||| |||||||| || ||||||||||| ||||| ||||| Sbjct: 329 atgtttgatgtccaggtgaagaggatacatgagtacaagcgacagct 375
>gb|BC082229.1| Homo sapiens phosphorylase, glycogen; liver (Hers disease, glycogen storage disease type VI), mRNA (cDNA clone IMAGE:4053354), partial cds Length = 2806 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 188 atgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagct 234 ||||||||||| |||||||| || ||||||||||| ||||| ||||| Sbjct: 1758 atgtttgatgtccaggtgaagaggatacatgagtacaagcgacagct 1804
>gb|BC009895.2| Homo sapiens phosphorylase, glycogen; liver (Hers disease, glycogen storage disease type VI), mRNA (cDNA clone IMAGE:2967205), partial cds Length = 2831 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 188 atgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagct 234 ||||||||||| |||||||| || ||||||||||| ||||| ||||| Sbjct: 1757 atgtttgatgtccaggtgaagaggatacatgagtacaagcgacagct 1803
>ref|NM_002863.3| Homo sapiens phosphorylase, glycogen; liver (Hers disease, glycogen storage disease type VI) (PYGL), mRNA Length = 2830 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 188 atgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagct 234 ||||||||||| |||||||| || ||||||||||| ||||| ||||| Sbjct: 1800 atgtttgatgtccaggtgaagaggatacatgagtacaagcgacagct 1846
>emb|CR600182.1| full-length cDNA clone CS0DC011YN07 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 2649 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 188 atgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagct 234 ||||||||||| |||||||| || ||||||||||| ||||| ||||| Sbjct: 1678 atgtttgatgtccaggtgaagaggatacatgagtacaagcgacagct 1724
>emb|CR593967.1| full-length cDNA clone CS0DE007YN07 of Placenta of Homo sapiens (human) Length = 2761 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 188 atgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagct 234 ||||||||||| |||||||| || ||||||||||| ||||| ||||| Sbjct: 1762 atgtttgatgtccaggtgaagaggatacatgagtacaagcgacagct 1808
>emb|CR594898.1| full-length cDNA clone CS0DD001YM02 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) Length = 2213 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 188 atgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagct 234 ||||||||||| |||||||| || ||||||||||| ||||| ||||| Sbjct: 1201 atgtttgatgtccaggtgaagaggatacatgagtacaagcgacagct 1247
>gb|BC095850.1| Homo sapiens cDNA clone IMAGE:30343100, partial cds Length = 2828 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 188 atgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagct 234 ||||||||||| |||||||| || ||||||||||| ||||| ||||| Sbjct: 1774 atgtttgatgtccaggtgaagaggatacatgagtacaagcgacagct 1820
>emb|AL358334.3|CNS05TE5 Human chromosome 14 DNA sequence BAC R-218E20 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 174793 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 188 atgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagct 234 ||||||||||| |||||||| || ||||||||||| ||||| ||||| Sbjct: 117644 atgtttgatgtccaggtgaagaggatacatgagtacaagcgacagct 117690
>gb|AF046785.1|AF046785 Homo sapiens liver glycogen phosphorylase (PYGL) mRNA, complete cds Length = 2544 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 188 atgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagct 234 ||||||||||| |||||||| || ||||||||||| ||||| ||||| Sbjct: 1687 atgtttgatgtccaggtgaagaggatacatgagtacaagcgacagct 1733
>gb|AF066858.1|AF066858 Homo sapiens liver glycogen phosphorylase (PYGL) mRNA, complete cds Length = 2544 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 188 atgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagct 234 ||||||||||| |||||||| || ||||||||||| ||||| ||||| Sbjct: 1687 atgtttgatgtccaggtgaagagtatacatgagtacaagcgacagct 1733
>gb|BC110791.1| Homo sapiens phosphorylase, glycogen; liver (Hers disease, glycogen storage disease type VI), mRNA (cDNA clone IMAGE:6051020), partial cds Length = 2915 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 188 atgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagct 234 ||||||||||| |||||||| || ||||||||||| ||||| ||||| Sbjct: 1756 atgtttgatgtccaggtgaagaggatacatgagtacaagcgacagct 1802
>gb|M14636.1|HUMGLYPL Human liver glycogen phosphorylase mRNA, complete cds Length = 2828 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 188 atgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagct 234 ||||||||||| |||||||| || ||||||||||| ||||| ||||| Sbjct: 1800 atgtttgatgtccaggtgaagaggatacatgagtacaagcgacagct 1846
>emb|Y15233.1|HSY15233 Homo sapiens mRNA for liver glycogen phosphorylase Length = 2643 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 188 atgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagct 234 ||||||||||| |||||||| || ||||||||||| ||||| ||||| Sbjct: 1738 atgtttgatgtccaggtgaagaggatacatgagtacaagcgacagct 1784
>emb|Y15229.1|HSY15229 Homo sapiens pygl gene, intron 14 and partial exon 14 and 15 Length = 317 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 188 atgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagct 234 ||||||||||| |||||||| || ||||||||||| ||||| ||||| Sbjct: 60 atgtttgatgtccaggtgaagaggatacatgagtacaagcgacagct 106
>gb|M36807.1|HUMGLYP Human liver glycogen phosphorylase type IV mRNA, 3' end Length = 1285 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 188 atgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagct 234 ||||||||||| |||||||| || ||||||||||| ||||| ||||| Sbjct: 244 atgtttgatgtccaggtgaagaggatacatgagtacaagcgacagct 290
>gb|AY827550.1| Ovis aries brain glycogen phosphorylase (PYGB) mRNA, complete cds Length = 3801 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 188 atgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagctgct 237 |||||||| ||||| ||||| || || |||||||| |||||||||||||| Sbjct: 1781 atgtttgacgtgcacgtgaagaggatccatgagtacaagcggcagctgct 1830
>ref|NM_001020628.1| Danio rerio zgc:110706 (zgc:110706), mRNA Length = 2763 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 200 caggtgaaaagaatacatgagtataagcggcagctgct 237 |||||||||||||| ||||||||||| |||||||||| Sbjct: 1766 caggtgaaaagaatccatgagtataaaaggcagctgct 1803
>dbj|AK169631.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430002P09 product:brain glycogen phosphorylase, full insert sequence Length = 3851 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 188 atgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagctgct 237 |||||||||||||| ||||| || || || || ||||||||||||||||| Sbjct: 1773 atgtttgatgtgcacgtgaagaggatccacgaatataagcggcagctgct 1822
>ref|NM_001024863.1| Ovis aries brain glycogen phosphorylase (PYGB), mRNA Length = 3801 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 188 atgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagctgct 237 |||||||| ||||| ||||| || || |||||||| |||||||||||||| Sbjct: 1781 atgtttgacgtgcacgtgaagaggatccatgagtacaagcggcagctgct 1830
>gb|BC095379.1| Danio rerio zgc:110706, mRNA (cDNA clone MGC:110706 IMAGE:7171959), complete cds Length = 2763 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 200 caggtgaaaagaatacatgagtataagcggcagctgct 237 |||||||||||||| ||||||||||| |||||||||| Sbjct: 1766 caggtgaaaagaatccatgagtataaaaggcagctgct 1803
>gb|AY098892.1| Citrus hybrid cultivar starch phosphorylase type L mRNA, partial cds Length = 976 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 254 gtttaccgctacaagaagatgaaag 278 ||||||||||||||||||||||||| Sbjct: 952 gtttaccgctacaagaagatgaaag 976
>gb|AC167245.2| Mus musculus BAC clone RP23-421F2 from chromosome 19, complete sequence Length = 198219 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Plus Query: 191 tttgatgtgcaggtgaaaagaatacatgagtataagcggcagct 234 ||||| || ||||||||||| || |||||||| ||||||||||| Sbjct: 52571 tttgacgtccaggtgaaaaggattcatgagtacaagcggcagct 52614
>ref|NM_011224.1| Mus musculus muscle glycogen phosphorylase (Pygm), mRNA Length = 2874 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Plus Query: 191 tttgatgtgcaggtgaaaagaatacatgagtataagcggcagct 234 ||||| || ||||||||||| || |||||||| ||||||||||| Sbjct: 1740 tttgacgtccaggtgaaaaggattcatgagtacaagcggcagct 1783
>gb|AC164422.2| Mus musculus chromosome 19, clone RP23-407G6, complete sequence Length = 212046 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Plus Query: 191 tttgatgtgcaggtgaaaagaatacatgagtataagcggcagct 234 ||||| || ||||||||||| || |||||||| ||||||||||| Sbjct: 46182 tttgacgtccaggtgaaaaggattcatgagtacaagcggcagct 46225
>gb|AC006956.16| Mus musculus Chromosome 19 BAC Clone 7d23, complete sequence Length = 132397 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Minus Query: 191 tttgatgtgcaggtgaaaagaatacatgagtataagcggcagct 234 ||||| || ||||||||||| || |||||||| ||||||||||| Sbjct: 64889 tttgacgtccaggtgaaaaggattcatgagtacaagcggcagct 64846
>emb|AJ720619.1| Gallus gallus mRNA for hypothetical protein, clone 21l24 Length = 3089 Score = 48.1 bits (24), Expect = 0.025 Identities = 42/48 (87%) Strand = Plus / Plus Query: 188 atgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagctg 235 |||||||||||||| ||||| || || || ||||| |||||||||||| Sbjct: 1748 atgtttgatgtgcacgtgaagaggatccacgagtacaagcggcagctg 1795
>ref|NM_204392.1| Gallus gallus phosphorylase, glycogen; liver (Hers disease, glycogen storage disease type VI) (PYGL), mRNA Length = 3055 Score = 48.1 bits (24), Expect = 0.025 Identities = 42/48 (87%) Strand = Plus / Plus Query: 188 atgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagctg 235 |||||||||||||| ||||| || || || ||||| |||||||||||| Sbjct: 1726 atgtttgatgtgcacgtgaagaggatccacgagtacaagcggcagctg 1773
>gb|AY271349.1| Gallus gallus glycogen phosphorylase mRNA, complete cds Length = 3055 Score = 48.1 bits (24), Expect = 0.025 Identities = 42/48 (87%) Strand = Plus / Plus Query: 188 atgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagctg 235 |||||||||||||| ||||| || || || ||||| |||||||||||| Sbjct: 1726 atgtttgatgtgcacgtgaagaggatccacgagtacaagcggcagctg 1773
>gb|AF124787.1|AF124787 Mus musculus muscle glycogen phosphorylase (Pygm) mRNA, complete cds Length = 2874 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Plus Query: 191 tttgatgtgcaggtgaaaagaatacatgagtataagcggcagct 234 ||||| || ||||||||||| || |||||||| ||||||||||| Sbjct: 1740 tttgacgtccaggtgaaaaggattcatgagtacaagcggcagct 1783
>gb|L25626.1|IPBSTAPHOA Ipomoea batatas starch phosphorylase gene, complete cds Length = 6594 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Plus Query: 254 gtttaccgctacaagaagatgaaagaaatgag 285 ||||| ||||||||| |||||||||||||||| Sbjct: 4698 gtttatcgctacaagcagatgaaagaaatgag 4729
>gb|BC012961.1| Mus musculus muscle glycogen phosphorylase, mRNA (cDNA clone MGC:13713 IMAGE:3989941), complete cds Length = 2897 Score = 46.1 bits (23), Expect = 0.098 Identities = 32/35 (91%) Strand = Plus / Plus Query: 200 caggtgaaaagaatacatgagtataagcggcagct 234 ||||||||||| || |||||||| ||||||||||| Sbjct: 1755 caggtgaaaaggattcatgagtacaagcggcagct 1789
>gb|AC104675.3| Sus scrofa clone RP44-122H18, complete sequence Length = 176345 Score = 46.1 bits (23), Expect = 0.098 Identities = 26/27 (96%) Strand = Plus / Minus Query: 188 atgtttgatgtgcaggtgaaaagaata 214 |||||||||||||| |||||||||||| Sbjct: 166943 atgtttgatgtgcacgtgaaaagaata 166917
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 46.1 bits (23), Expect = 0.098 Identities = 38/43 (88%) Strand = Plus / Minus Query: 189 tgtttgatgtgcaggtgaaaagaatacatgagtataagcggca 231 |||||||||||||||| ||| |||| ||||| ||||| ||||| Sbjct: 1073948 tgtttgatgtgcaggtaaaacgaatccatgaatataaacggca 1073906 Score = 40.1 bits (20), Expect = 6.0 Identities = 35/40 (87%) Strand = Plus / Plus Query: 189 tgtttgatgtgcaggtgaaaagaatacatgagtataagcg 228 |||||||||||||||| ||| | || ||||| |||||||| Sbjct: 1118824 tgtttgatgtgcaggtcaaacggattcatgaatataagcg 1118863
>gb|BC030795.2| Homo sapiens phosphorylase, glycogen; brain, mRNA (cDNA clone MGC:16933 IMAGE:3916938), complete cds Length = 4103 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Plus Query: 188 atgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagctgct 237 ||||| |||||||| ||||| || || || ||||| |||||||||||||| Sbjct: 1772 atgttcgatgtgcatgtgaagaggatccacgagtacaagcggcagctgct 1821
>gb|BC017045.2| Homo sapiens phosphorylase, glycogen; brain, mRNA (cDNA clone MGC:9213 IMAGE:3877951), complete cds Length = 4154 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Plus Query: 188 atgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagctgct 237 ||||| |||||||| ||||| || || || ||||| |||||||||||||| Sbjct: 1771 atgttcgatgtgcatgtgaagaggatccacgagtacaagcggcagctgct 1820
>gb|BC107536.1| Bos taurus phosphorylase, glycogen; brain, mRNA (cDNA clone MGC:128680 IMAGE:7987210), complete cds Length = 3808 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Plus Query: 188 atgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagctgct 237 ||||| || ||||| ||||| || || |||||||| |||||||||||||| Sbjct: 1811 atgttcgacgtgcacgtgaagaggatccatgagtacaagcggcagctgct 1860
>ref|NM_002862.3| Homo sapiens phosphorylase, glycogen; brain (PYGB), mRNA Length = 4131 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Plus Query: 188 atgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagctgct 237 ||||| |||||||| ||||| || || || ||||| |||||||||||||| Sbjct: 1796 atgttcgatgtgcatgtgaagaggatccacgagtacaagcggcagctgct 1845
>ref|XM_534201.2| PREDICTED: Canis familiaris similar to Glycogen phosphorylase, brain form, transcript variant 1 (LOC477003), mRNA Length = 3496 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Plus Query: 188 atgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagctgct 237 ||||| || ||||| ||||| || || |||||||| |||||||||||||| Sbjct: 1585 atgttcgacgtgcacgtgaagaggatccatgagtacaagcggcagctgct 1634
>ref|XM_851427.1| PREDICTED: Canis familiaris similar to Glycogen phosphorylase, brain form, transcript variant 2 (LOC477003), mRNA Length = 2829 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Plus Query: 188 atgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagctgct 237 ||||| || ||||| ||||| || || |||||||| |||||||||||||| Sbjct: 918 atgttcgacgtgcacgtgaagaggatccatgagtacaagcggcagctgct 967
>ref|NM_001035270.1| Bos taurus phosphorylase, glycogen; brain (PYGB), mRNA Length = 3808 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Plus Query: 188 atgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagctgct 237 ||||| || ||||| ||||| || || |||||||| |||||||||||||| Sbjct: 1811 atgttcgacgtgcacgtgaagaggatccatgagtacaagcggcagctgct 1860
>emb|AL121772.19|HSJ965G21 Human DNA sequence from clone RP5-965G21 on chromosome 20 Contains the PYGB gene encoding the brain form of glycogen phosphorylase, the 3' end of the C20orf22 gene for chromosome 20 open reading frame 22 and a CpG island, complete sequence Length = 75499 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Plus Query: 188 atgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagctgct 237 ||||| |||||||| ||||| || || || ||||| |||||||||||||| Sbjct: 53548 atgttcgatgtgcatgtgaagaggatccacgagtacaagcggcagctgct 53597
>ref|NM_001031034.1| Gallus gallus similar to Glycogen phosphorylase, brain form (LOC421248), mRNA Length = 3537 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 200 caggtgaaaagaatacatgagtataagcggcagctgct 237 ||||| || ||||| |||||||| |||||||||||||| Sbjct: 1790 caggtcaagagaatccatgagtacaagcggcagctgct 1827
>gb|BC035283.1| Mus musculus brain glycogen phosphorylase, mRNA (cDNA clone MGC:36329 IMAGE:4947455), complete cds Length = 3860 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Plus Query: 188 atgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagctgct 237 |||||||||||||| ||||| || || || || |||||||| |||||||| Sbjct: 1759 atgtttgatgtgcacgtgaagaggatccacgaatataagcgacagctgct 1808
>emb|AJ719440.1| Gallus gallus mRNA for hypothetical protein, clone 2f16 Length = 3537 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 200 caggtgaaaagaatacatgagtataagcggcagctgct 237 ||||| || ||||| |||||||| |||||||||||||| Sbjct: 1790 caggtcaagagaatccatgagtacaagcggcagctgct 1827
>dbj|AK134667.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length enriched library, clone:6330520L13 product:brain glycogen phosphorylase, full insert sequence Length = 3847 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Plus Query: 188 atgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagctgct 237 |||||||||||||| ||||| || || || || |||||||| |||||||| Sbjct: 1769 atgtttgatgtgcacgtgaagaggatccacgaatataagcgacagctgct 1818
>dbj|AK142716.1| Mus musculus 16 days neonate heart cDNA, RIKEN full-length enriched library, clone:D830024H01 product:brain glycogen phosphorylase, full insert sequence Length = 3379 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Plus Query: 188 atgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagctgct 237 |||||||||||||| ||||| || || || || |||||||| |||||||| Sbjct: 1769 atgtttgatgtgcacgtgaagaggatccacgaatataagcgacagctgct 1818
>dbj|AK133794.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730419M01 product:brain glycogen phosphorylase, full insert sequence Length = 2568 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Plus Query: 188 atgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagctgct 237 |||||||||||||| ||||| || || || || |||||||| |||||||| Sbjct: 489 atgtttgatgtgcacgtgaagaggatccacgaatataagcgacagctgct 538
>dbj|AK168381.1| Mus musculus 17 days embryo stomach cDNA, RIKEN full-length enriched library, clone:I920005N08 product:brain glycogen phosphorylase, full insert sequence Length = 3849 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Plus Query: 188 atgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagctgct 237 |||||||||||||| ||||| || || || || |||||||| |||||||| Sbjct: 1771 atgtttgatgtgcacgtgaagaggatccacgaatataagcgacagctgct 1820
>dbj|AK169052.1| Mus musculus 16 days embryo heart cDNA, RIKEN full-length enriched library, clone:I920077D05 product:brain glycogen phosphorylase, full insert sequence Length = 3872 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Plus Query: 188 atgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagctgct 237 |||||||||||||| ||||| || || || || |||||||| |||||||| Sbjct: 1794 atgtttgatgtgcacgtgaagaggatccacgaatataagcgacagctgct 1843
>gb|BC032209.1| Mus musculus brain glycogen phosphorylase, mRNA (cDNA clone IMAGE:5323056), partial cds Length = 3007 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Plus Query: 188 atgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagctgct 237 |||||||||||||| ||||| || || || || |||||||| |||||||| Sbjct: 914 atgtttgatgtgcacgtgaagaggatccacgaatataagcgacagctgct 963
>dbj|AK035673.1| Mus musculus adult male urinary bladder cDNA, RIKEN full-length enriched library, clone:9530084O19 product:brain glycogen phosphorylase, full insert sequence Length = 3303 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Plus Query: 188 atgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagctgct 237 |||||||||||||| ||||| || || || || |||||||| |||||||| Sbjct: 1489 atgtttgatgtgcacgtgaagaggatccacgaatataagcgacagctgct 1538
>dbj|AK032769.1| Mus musculus 12 days embryo male wolffian duct includes surrounding region cDNA, RIKEN full-length enriched library, clone:6720431N20 product:brain glycogen phosphorylase, full insert sequence Length = 3586 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Plus Query: 188 atgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagctgct 237 |||||||||||||| ||||| || || || || |||||||| |||||||| Sbjct: 1772 atgtttgatgtgcacgtgaagaggatccacgaatataagcgacagctgct 1821
>ref|XM_342542.2| PREDICTED: Rattus norvegicus brain glycogen phosphorylase (Pygb), mRNA Length = 3822 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Plus Query: 188 atgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagctgct 237 |||||||||||||| || || || || || ||||| |||||||||||||| Sbjct: 1769 atgtttgatgtgcacgtcaagaggatccacgagtacaagcggcagctgct 1818
>emb|AL954712.9| Mouse DNA sequence from clone RP23-241M12 on chromosome 2, complete sequence Length = 65039 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Plus Query: 188 atgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagctgct 237 |||||||||||||| ||||| || || || || |||||||| |||||||| Sbjct: 50707 atgtttgatgtgcacgtgaagaggatccacgaatataagcgacagctgct 50756
>gb|BC031457.1| Mus musculus cDNA clone IMAGE:4458895, containing frame-shift errors Length = 3867 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Plus Query: 188 atgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagctgct 237 |||||||||||||| ||||| || || || || |||||||| |||||||| Sbjct: 1766 atgtttgatgtgcacgtgaagaggatccacgaatataagcgacagctgct 1815
>ref|NM_153781.1| Mus musculus brain glycogen phosphorylase (Pygb), mRNA Length = 3860 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Plus Query: 188 atgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagctgct 237 |||||||||||||| ||||| || || || || |||||||| |||||||| Sbjct: 1759 atgtttgatgtgcacgtgaagaggatccacgaatataagcgacagctgct 1808
>gb|U47025.1|HSU47025 Human fetal brain glycogen phosphorylase B mRNA, complete cds Length = 4066 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Plus Query: 188 atgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagctgct 237 ||||| |||||||| ||||| || || || ||||| |||||||||||||| Sbjct: 1721 atgttcgatgtgcatgtgaagaggatccacgagtacaagcggcagctgct 1770
>gb|AC161414.3| Mus musculus chromosome 1, clone CH36-500J15, complete sequence Length = 165234 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 262 ctacaagaagatgaaagaaatg 283 |||||||||||||||||||||| Sbjct: 112628 ctacaagaagatgaaagaaatg 112649
>gb|J03544.1|HUMMGPHB Human brain glycogen phosphorylase mRNA, complete cds Length = 3816 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Plus Query: 188 atgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagctgct 237 ||||| |||||||| ||||| || || || ||||| |||||||||||||| Sbjct: 1766 atgttcgatgtgcatgtgaagaggatccacgagtacaagcggcagctgct 1815
>gb|AC152828.1| Ornithorhynchus anatinus chromosome UNK clone OABb-462A1, complete sequence Length = 146407 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 272 atgaaagaaatgagtgcaaaa 292 ||||||||||||||||||||| Sbjct: 144618 atgaaagaaatgagtgcaaaa 144598
>gb|BT018567.1| Zea mays clone EL01N0442B08.d mRNA sequence Length = 2145 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 75 ttgctgatgatgaggatctacaatcagaa 103 ||||||||||||||||| || |||||||| Sbjct: 158 ttgctgatgatgaggatgtaaaatcagaa 186
>gb|BC072163.1| Xenopus laevis hypothetical protein MGC80198, mRNA (cDNA clone MGC:80198 IMAGE:4970795), complete cds Length = 5192 Score = 42.1 bits (21), Expect = 1.5 Identities = 42/49 (85%) Strand = Plus / Plus Query: 189 tgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagctgct 237 ||||||||||||| || || ||||| ||||| || ||| |||||||||| Sbjct: 1817 tgtttgatgtgcaagtcaagagaatccatgaatacaagaggcagctgct 1865
>gb|AY811830.1| Schistosoma japonicum SJCHGC00991 protein mRNA, partial cds Length = 1665 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 191 tttgatgtgcaggtgaaaagaatacatgagtataagcggcagctg 235 |||||| | ||||| |||||||| ||||||||||| || |||||| Sbjct: 469 tttgatatccaggtcaaaagaattcatgagtataaacgccagctg 513
>gb|BC068296.1| Xenopus tropicalis phosphorylase, glycogen; muscle (McArdle syndrome, glycogen storage disease type V), mRNA (cDNA clone MGC:75996 IMAGE:5384504), complete cds Length = 4812 Score = 42.1 bits (21), Expect = 1.5 Identities = 42/49 (85%) Strand = Plus / Plus Query: 189 tgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagctgct 237 ||||||||||||| || || ||||| ||||| || ||| |||||||||| Sbjct: 1720 tgtttgatgtgcaagtcaagagaatccatgaatacaagaggcagctgct 1768
>gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome Length = 2575032 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 gatgaaagaaatgagtgcaaa 291 ||||||||||||||||||||| Sbjct: 1758539 gatgaaagaaatgagtgcaaa 1758559
>ref|NM_001001904.1| Xenopus tropicalis phosphorylase, glycogen; muscle (McArdle syndrome, glycogen storage disease type V) (pygm), mRNA Length = 4812 Score = 42.1 bits (21), Expect = 1.5 Identities = 42/49 (85%) Strand = Plus / Plus Query: 189 tgtttgatgtgcaggtgaaaagaatacatgagtataagcggcagctgct 237 ||||||||||||| || || ||||| ||||| || ||| |||||||||| Sbjct: 1720 tgtttgatgtgcaagtcaagagaatccatgaatacaagaggcagctgct 1768
>gb|AF398349.1| Ngari virus isolate 9800535 L polymerase gene, partial cds Length = 582 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 aagtttgctgatgatgagga 90 |||||||||||||||||||| Sbjct: 547 aagtttgctgatgatgagga 566
>gb|AF398350.1| Ngari virus isolate 9800521 L polymerase gene, partial cds Length = 582 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 aagtttgctgatgatgagga 90 |||||||||||||||||||| Sbjct: 547 aagtttgctgatgatgagga 566
>gb|AC135417.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1314_A05, complete sequence Length = 109853 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 caagatgaaggtagtttcgc 146 |||||||||||||||||||| Sbjct: 54708 caagatgaaggtagtttcgc 54727
>gb|AC135424.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0015F11, complete sequence Length = 177574 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 caagatgaaggtagtttcgc 146 |||||||||||||||||||| Sbjct: 26794 caagatgaaggtagtttcgc 26813
>gb|AC137606.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0004B23, complete sequence Length = 153136 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 caagatgaaggtagtttcgc 146 |||||||||||||||||||| Sbjct: 38135 caagatgaaggtagtttcgc 38154
>gb|AC101728.10| Mus musculus chromosome 19, clone RP23-328I5, complete sequence Length = 184577 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 161 actggatatattgtcagcccagat 184 ||||||||||||| |||||||||| Sbjct: 43151 actggatatattgccagcccagat 43128
>gb|AC123722.8| Mus musculus chromosome 5, clone RP23-424O22, complete sequence Length = 205851 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 acactgataaacttgcagga 64 |||||||||||||||||||| Sbjct: 36030 acactgataaacttgcagga 36049
>gb|AY593728.1| Ngari virus L polymerase gene, partial cds Length = 582 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 aagtttgctgatgatgagga 90 |||||||||||||||||||| Sbjct: 547 aagtttgctgatgatgagga 566
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 gtatcgtttaccgctacaag 268 |||||||||||||||||||| Sbjct: 2053630 gtatcgtttaccgctacaag 2053611
>gb|AC118613.8| Mus musculus chromosome 6, clone RP23-442E2, complete sequence Length = 256556 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 gctacaagaagatgaaagaa 280 |||||||||||||||||||| Sbjct: 176675 gctacaagaagatgaaagaa 176694
>emb|AL391864.13| Human DNA sequence from clone RP11-378H16 on chromosome 9, complete sequence Length = 30920 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 365 aagaggattgtgaagtttatcaca 388 ||||||||||||||||| |||||| Sbjct: 11421 aagaggattgtgaagttaatcaca 11444
>emb|BX957335.12| Zebrafish DNA sequence from clone CH211-119A10 in linkage group 11, complete sequence Length = 168444 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 264 acaagaagatgaaagaaatgagtg 287 ||||||| |||||||||||||||| Sbjct: 40123 acaagaaaatgaaagaaatgagtg 40146
>gb|AC011447.7| Homo sapiens chromosome 19 clone CTC-260E6, complete sequence Length = 165676 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 279 aaatgagtgcaaaagatagaagaa 302 ||||||||| |||||||||||||| Sbjct: 114049 aaatgagtgaaaaagatagaagaa 114026
>gb|AC115539.4| Homo sapiens BAC clone RP11-359D11 from 4, complete sequence Length = 46825 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 aaagatagaagaaagagctt 309 |||||||||||||||||||| Sbjct: 23521 aaagatagaagaaagagctt 23502
>gb|CP000282.1| Saccharophagus degradans 2-40, complete genome Length = 5057531 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 tgtttgatgtgcaggtgaaa 208 |||||||||||||||||||| Sbjct: 1267152 tgtttgatgtgcaggtgaaa 1267171
>gb|AC104376.6| Homo sapiens chromosome 8, clone CTD-2242O8, complete sequence Length = 203348 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 ttgcagctactgtaaattat 412 |||||||||||||||||||| Sbjct: 172327 ttgcagctactgtaaattat 172346
>gb|AY952445.1| Bacillus thuringiensis serovar kurstaki glycogen phosphorylase gene, partial cds Length = 1271 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 191 tttgatgtgcaggtgaaaagaatacatg 218 ||||||||||| ||||||||| |||||| Sbjct: 967 tttgatgtgcaagtgaaaagattacatg 994
>gb|AE002160.2| Chlamydia muridarum Nigg, complete genome Length = 1072950 Score = 40.1 bits (20), Expect = 6.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 212 atacatgagtataagcggcagctgctaaatatcctt 247 |||||||||||||| || |||||| | ||||||||| Sbjct: 627833 atacatgagtataaacgtcagctgatgaatatcctt 627798
>dbj|AK031155.1| Mus musculus 13 days embryo forelimb cDNA, RIKEN full-length enriched library, clone:5930417E23 product:unclassifiable, full insert sequence Length = 2726 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 gctacaagaagatgaaagaa 280 |||||||||||||||||||| Sbjct: 1660 gctacaagaagatgaaagaa 1641
>gb|AC148698.1| Macaca mulatta Major Histocompatibility Complex BAC MMU268P23, complete sequence Length = 185838 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 taaaaggaataacaagatga 134 |||||||||||||||||||| Sbjct: 39022 taaaaggaataacaagatga 39041
>gb|AC148689.1| Macaca mulatta Major Histocompatibility Complex BAC MMU222I18, complete sequence Length = 174202 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 taaaaggaataacaagatga 134 |||||||||||||||||||| Sbjct: 136085 taaaaggaataacaagatga 136104
>dbj|AK089824.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830029E09 product:unclassifiable, full insert sequence Length = 2627 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 ttggtgggaaagcttttgcc 349 |||||||||||||||||||| Sbjct: 2188 ttggtgggaaagcttttgcc 2207
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 caagatgaaggtagtttcgc 146 |||||||||||||||||||| Sbjct: 15941043 caagatgaaggtagtttcgc 15941062 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 caagatgaaggtagtttcgc 146 |||||||||||||||||||| Sbjct: 8552563 caagatgaaggtagtttcgc 8552582
>gb|AC126415.9| Mus musculus chromosome 5, clone RP24-476K21, complete sequence Length = 168525 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 acactgataaacttgcagga 64 |||||||||||||||||||| Sbjct: 143503 acactgataaacttgcagga 143522
>gb|AC027033.3|AC027033 Arabidopsis thaliana chromosome 1 BAC F21N10 genomic sequence, complete sequence Length = 98017 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 417 ctgatattggagatttactgaagg 440 ||||||||||||||||| |||||| Sbjct: 72670 ctgatattggagatttaatgaagg 72647
>dbj|AP002060.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone: T20F20 Length = 56287 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 417 ctgatattggagatttactgaagg 440 ||||||||||||||||| |||||| Sbjct: 4202 ctgatattggagatttaatgaagg 4179
>emb|X14383.1|BLCLPA Bunyamwera virus L protein RNA, complete cds Length = 6875 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 aagtttgctgatgatgagga 90 |||||||||||||||||||| Sbjct: 561 aagtttgctgatgatgagga 580
>gb|AC154016.2| Mus musculus 6 BAC RP24-146M9 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 159862 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 gctacaagaagatgaaagaa 280 |||||||||||||||||||| Sbjct: 143839 gctacaagaagatgaaagaa 143820
>emb|AL513422.2|HS527D15 Homo sapiens chromosome 9 BAC RP11-527D15, complete sequence Length = 166169 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 365 aagaggattgtgaagtttatcaca 388 ||||||||||||||||| |||||| Sbjct: 7270 aagaggattgtgaagttaatcaca 7293
>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome Length = 4969803 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 tgtttgatgtgcaggtgaaa 208 |||||||||||||||||||| Sbjct: 1566477 tgtttgatgtgcaggtgaaa 1566496
>gb|AC101812.19| Mus musculus chromosome 19, clone RP24-309C5, complete sequence Length = 169224 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 161 actggatatattgtcagcccagat 184 ||||||||||||| |||||||||| Sbjct: 166699 actggatatattgccagcccagat 166676
>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome Length = 5411809 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 191 tttgatgtgcaggtgaaaagaatacatg 218 ||||||||||| ||||||||| |||||| Sbjct: 4787386 tttgatgtgcaagtgaaaagattacatg 4787359
>gb|AC171647.3| Rhesus Macaque BAC CH250-482O21 (Children's Hospital Oakland Research Institute Rhesus macaque Adult Male BAC Library) complete sequence Length = 123862 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 ggatcctgaacactgataaa 55 |||||||||||||||||||| Sbjct: 51524 ggatcctgaacactgataaa 51505
>gb|AC161879.5| Mus musculus BAC clone RP23-264A15 from chromosome 1, complete sequence Length = 206995 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 ttggtgggaaagcttttgcc 349 |||||||||||||||||||| Sbjct: 138915 ttggtgggaaagcttttgcc 138934
>emb|AL591205.13| Mouse DNA sequence from clone RP23-333M1 on chromosome 11, complete sequence Length = 183369 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 289 aaaagatagaagaaagagctttgt 312 |||||| ||||||||||||||||| Sbjct: 118699 aaaagacagaagaaagagctttgt 118676 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,652,848 Number of Sequences: 3902068 Number of extensions: 4652848 Number of successful extensions: 93043 Number of sequences better than 10.0: 125 Number of HSP's better than 10.0 without gapping: 126 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 92647 Number of HSP's gapped (non-prelim): 393 length of query: 449 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 427 effective length of database: 17,147,199,772 effective search space: 7321854302644 effective search space used: 7321854302644 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
