| Clone Name | bags4f20 |
|---|---|
| Clone Library Name | barley_pub |
>UXS1_RAT (Q5PQX0) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1) Length = 420 Score = 211 bits (538), Expect = 5e-55 Identities = 98/149 (65%), Positives = 124/149 (83%) Frame = +3 Query: 3 GLAKRVGARILLTSTSEVYGDPLEHPQTEAYWGNVNPIGVRSCYDEGKRVAETLMXXYHR 182 GLAKRVGAR+LL STSEVYGDP HPQ+E YWG+VNPIG R+CYDEGKRVAET+ Y + Sbjct: 188 GLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMK 247 Query: 183 QHGIEIRIXRIFNTYGPRMNIDDGRVVSNFIAXAIRGEALTVQKPGTQTRSFCYVADMVN 362 Q G+E+R+ RIFNT+GPRM+++DGRVVSNFI A++GE LTV G+QTR+F YV+D+VN Sbjct: 248 QEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVN 307 Query: 363 GLMKLMNGDNTGPINIGNPGEFTMLELAE 449 GL+ LMN + + P+N+GNP E T+LE A+ Sbjct: 308 GLVALMNSNVSSPVNLGNPEEHTILEFAQ 336
>UXS1_PONPY (Q5R885) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1) Length = 420 Score = 211 bits (538), Expect = 5e-55 Identities = 98/149 (65%), Positives = 124/149 (83%) Frame = +3 Query: 3 GLAKRVGARILLTSTSEVYGDPLEHPQTEAYWGNVNPIGVRSCYDEGKRVAETLMXXYHR 182 GLAKRVGAR+LL STSEVYGDP HPQ+E YWG+VNPIG R+CYDEGKRVAET+ Y + Sbjct: 188 GLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMK 247 Query: 183 QHGIEIRIXRIFNTYGPRMNIDDGRVVSNFIAXAIRGEALTVQKPGTQTRSFCYVADMVN 362 Q G+E+R+ RIFNT+GPRM+++DGRVVSNFI A++GE LTV G+QTR+F YV+D+VN Sbjct: 248 QEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVN 307 Query: 363 GLMKLMNGDNTGPINIGNPGEFTMLELAE 449 GL+ LMN + + P+N+GNP E T+LE A+ Sbjct: 308 GLVALMNSNVSSPVNLGNPEEHTILEFAQ 336
>UXS1_MOUSE (Q91XL3) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1) Length = 420 Score = 211 bits (538), Expect = 5e-55 Identities = 98/149 (65%), Positives = 124/149 (83%) Frame = +3 Query: 3 GLAKRVGARILLTSTSEVYGDPLEHPQTEAYWGNVNPIGVRSCYDEGKRVAETLMXXYHR 182 GLAKRVGAR+LL STSEVYGDP HPQ+E YWG+VNPIG R+CYDEGKRVAET+ Y + Sbjct: 188 GLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMK 247 Query: 183 QHGIEIRIXRIFNTYGPRMNIDDGRVVSNFIAXAIRGEALTVQKPGTQTRSFCYVADMVN 362 Q G+E+R+ RIFNT+GPRM+++DGRVVSNFI A++GE LTV G+QTR+F YV+D+VN Sbjct: 248 QEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVN 307 Query: 363 GLMKLMNGDNTGPINIGNPGEFTMLELAE 449 GL+ LMN + + P+N+GNP E T+LE A+ Sbjct: 308 GLVALMNSNVSSPVNLGNPEEHTILEFAQ 336
>UXS1_HUMAN (Q8NBZ7) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1) Length = 420 Score = 211 bits (538), Expect = 5e-55 Identities = 98/149 (65%), Positives = 124/149 (83%) Frame = +3 Query: 3 GLAKRVGARILLTSTSEVYGDPLEHPQTEAYWGNVNPIGVRSCYDEGKRVAETLMXXYHR 182 GLAKRVGAR+LL STSEVYGDP HPQ+E YWG+VNPIG R+CYDEGKRVAET+ Y + Sbjct: 188 GLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMK 247 Query: 183 QHGIEIRIXRIFNTYGPRMNIDDGRVVSNFIAXAIRGEALTVQKPGTQTRSFCYVADMVN 362 Q G+E+R+ RIFNT+GPRM+++DGRVVSNFI A++GE LTV G+QTR+F YV+D+VN Sbjct: 248 QEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVN 307 Query: 363 GLMKLMNGDNTGPINIGNPGEFTMLELAE 449 GL+ LMN + + P+N+GNP E T+LE A+ Sbjct: 308 GLVALMNSNVSSPVNLGNPEEHTILEFAQ 336
>UXS1_BRARE (Q6GMI9) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UXS-1) Length = 418 Score = 210 bits (535), Expect = 1e-54 Identities = 98/149 (65%), Positives = 123/149 (82%) Frame = +3 Query: 3 GLAKRVGARILLTSTSEVYGDPLEHPQTEAYWGNVNPIGVRSCYDEGKRVAETLMXXYHR 182 GLAKRVGAR+LL STSEVYGDP HPQ E YWG+VNPIG R+CYDEGKRVAET+ Y + Sbjct: 186 GLAKRVGARLLLASTSEVYGDPEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMK 245 Query: 183 QHGIEIRIXRIFNTYGPRMNIDDGRVVSNFIAXAIRGEALTVQKPGTQTRSFCYVADMVN 362 Q G+E+R+ RIFNT+G RM+++DGRVVSNFI A++GEALTV G+QTR+F YV+D+VN Sbjct: 246 QEGVEVRVARIFNTFGSRMHMNDGRVVSNFILQALQGEALTVYGSGSQTRAFQYVSDLVN 305 Query: 363 GLMKLMNGDNTGPINIGNPGEFTMLELAE 449 GL+ LMN + + P+N+GNP E T+LE A+ Sbjct: 306 GLVSLMNSNISSPVNLGNPEEHTILEFAQ 334
>UXS1_XENTR (Q6DF08) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UXS-1) Length = 421 Score = 206 bits (525), Expect = 2e-53 Identities = 95/148 (64%), Positives = 122/148 (82%) Frame = +3 Query: 3 GLAKRVGARILLTSTSEVYGDPLEHPQTEAYWGNVNPIGVRSCYDEGKRVAETLMXXYHR 182 GLAKRVGAR+LL STSEVYGDP HPQ+E YWG+VNPIG R+CYDEGKRVAET+ Y + Sbjct: 189 GLAKRVGARLLLASTSEVYGDPEVHPQSEEYWGHVNPIGPRACYDEGKRVAETMCYAYMK 248 Query: 183 QHGIEIRIXRIFNTYGPRMNIDDGRVVSNFIAXAIRGEALTVQKPGTQTRSFCYVADMVN 362 Q G+E+R+ RIFNT+GPRM+++DGRVVSNFI A++GE LTV G QTR+F YV+D+VN Sbjct: 249 QEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEQLTVYGSGEQTRAFQYVSDLVN 308 Query: 363 GLMKLMNGDNTGPINIGNPGEFTMLELA 446 GL+ LMN + + P+N+GNP E ++++ A Sbjct: 309 GLVALMNSNVSSPVNLGNPQEHSIVQFA 336
>ACBB_ACTS5 (Q9ZAE8) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 341 Score = 63.9 bits (154), Expect = 2e-10 Identities = 42/142 (29%), Positives = 64/142 (45%), Gaps = 1/142 (0%) Frame = +3 Query: 27 RILLTSTSEVYGDPLEHPQTEAYWGNVNPIGVRSCYDEGKRVAETLMXXYHRQHGIEIRI 206 R L ST EVYG W +P+ S Y K ++ L YH+ HG+++ + Sbjct: 122 RFLHVSTDEVYGSI-----DTGSWAEGHPLAPNSPYAASKAGSDLLALAYHQTHGMDVVV 176 Query: 207 XRIFNTYGPRMNIDDGRVVSNFIAXAIRGEALTVQKPGTQTRSFCYVADMVNGLMKLMNG 386 R N YGPR + +++ F+ + G + V G R + +V+D GL + Sbjct: 177 TRCSNNYGPRQFPE--KMIPLFVTRLLDGLDVPVYGDGRNIRDWLHVSDHCRGLALALGA 234 Query: 387 DNTGPI-NIGNPGEFTMLELAE 449 G + +IG E T LEL E Sbjct: 235 GRAGEVYHIGGGWEATNLELTE 256
>GALE_METJA (Q57664) Putative UDP-glucose 4-epimerase (EC 5.1.3.2)| (Galactowaldenase) (UDP-galactose 4-epimerase) Length = 305 Score = 62.4 bits (150), Expect = 5e-10 Identities = 45/139 (32%), Positives = 66/139 (47%), Gaps = 1/139 (0%) Frame = +3 Query: 30 ILLTSTSEVYGDPLEHPQTEAYWGNVNPIGVRSCYDEGKRVAETLMXXYHRQHGIEIRIX 209 + +S VYG+P P E + PI S Y K V E + Y+R +GIE I Sbjct: 111 VFASSGGAVYGEPNYLPVDENH-----PINPLSPYGLSKYVGEEYIKLYNRLYGIEYAIL 165 Query: 210 RIFNTYGPRMN-IDDGRVVSNFIAXAIRGEALTVQKPGTQTRSFCYVADMVNGLMKLMNG 386 R N YG R + + V+S FI ++ ++ + G QTR F YV D+ + +N Sbjct: 166 RYSNVYGERQDPKGEAGVISIFIDKMLKNQSPIIFGDGNQTRDFVYVGDVAKANLMALNW 225 Query: 387 DNTGPINIGNPGEFTMLEL 443 N +NIG E ++ EL Sbjct: 226 KNE-IVNIGTGKETSVNEL 243
>STRE_STRGR (P29782) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 328 Score = 61.6 bits (148), Expect = 9e-10 Identities = 41/141 (29%), Positives = 62/141 (43%), Gaps = 1/141 (0%) Frame = +3 Query: 24 ARILLTSTSEVYGDPLEHPQTEAYWGNVNPIGVRSCYDEGKRVAETLMXXYHRQHGIEIR 203 A + ST EVYG LEH W P+ S Y K + L +H HG+++R Sbjct: 119 ASFVQVSTDEVYGS-LEHGS----WTEDEPLRPNSPYSASKASGDLLALAHHVSHGLDVR 173 Query: 204 IXRIFNTYGPRMNIDDGRVVSNFIAXAIRGEALTVQKPGTQTRSFCYVADMVNGLMKLMN 383 + R N YGPR + +++ FI + G + + G R + +V D V G+ + Sbjct: 174 VTRCSNNYGPRQFPE--KLIPRFITLLMDGHRVPLYGDGLNVREWLHVDDHVRGIEAVRT 231 Query: 384 GDNTGPI-NIGNPGEFTMLEL 443 G + NIG + EL Sbjct: 232 RGRAGRVYNIGGGATLSNKEL 252
>TGDS_HUMAN (O95455) dTDP-D-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 350 Score = 59.7 bits (143), Expect = 3e-09 Identities = 40/142 (28%), Positives = 64/142 (45%), Gaps = 1/142 (0%) Frame = +3 Query: 27 RILLTSTSEVYGDPLEHPQTEAYWGNVNPIGVRSCYDEGKRVAETLMXXYHRQHGIEIRI 206 + + ST EVYG L+ E+ +P + Y K AE + Y Q+ + I Sbjct: 136 KFIYVSTDEVYGGSLDKEFDES-----SPKQPTNPYASSKAAAECFVQSYWEQYKFPVVI 190 Query: 207 XRIFNTYGPRMNIDDGRVVSNFIAXAIRGEALTVQKPGTQTRSFCYVADMVNGLMKLMNG 386 R N YGP + +V+ FI+ + G QTR+F Y D+V + ++ Sbjct: 191 TRSSNVYGPHQYPE--KVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVVEAFLTVLKK 248 Query: 387 DNTGPI-NIGNPGEFTMLELAE 449 G I NIG E ++++LA+ Sbjct: 249 GKPGEIYNIGTNFEMSVVQLAK 270
>TGDS_MOUSE (Q8VDR7) dTDP-D-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 355 Score = 58.9 bits (141), Expect = 6e-09 Identities = 40/142 (28%), Positives = 64/142 (45%), Gaps = 1/142 (0%) Frame = +3 Query: 27 RILLTSTSEVYGDPLEHPQTEAYWGNVNPIGVRSCYDEGKRVAETLMXXYHRQHGIEIRI 206 + + ST EVYG L+ E+ +P + Y K AE + Y ++ + I Sbjct: 136 KFIYVSTDEVYGGSLDQEFDES-----SPKQPTNPYASSKAAAECFVQSYWERYKFPVVI 190 Query: 207 XRIFNTYGPRMNIDDGRVVSNFIAXAIRGEALTVQKPGTQTRSFCYVADMVNGLMKLMNG 386 R N YGP + RV+ FI+ + G Q R+F Y AD+V + ++ Sbjct: 191 TRSSNVYGPHQYPE--RVIPKFISLLQHNRKCCIHGSGLQRRNFLYAADVVEAFLTVLTK 248 Query: 387 DNTGPI-NIGNPGEFTMLELAE 449 G I NIG E ++++LA+ Sbjct: 249 GEPGEIYNIGTNFEMSVVQLAK 270
>ARNA_ERWCT (Q6D2F1) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 673 Score = 58.2 bits (139), Expect = 9e-09 Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 15/160 (9%) Frame = +3 Query: 15 RVGARILLTSTSEVYG----DPLEHPQTEAYWGNVNPIGVRSCYDEGKRVAETLMXXYHR 182 R RI+ STSEVYG + + G +N R Y K++ + ++ Y Sbjct: 429 RYNKRIVFPSTSEVYGMCDDKEFDEDTSRLIVGPINK--QRWIYSVSKQLLDRVIWAYGA 486 Query: 183 QHGIEIRIXRIFNTYGPRMN------IDDGRVVSNFIAXAIRGEALTVQKPGTQTRSFCY 344 ++G+ + R FN GPR++ I R ++ I + G + + G Q R F Sbjct: 487 KNGLRFTLFRPFNWMGPRLDTLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQKRCFTD 546 Query: 345 VADMVNGLMKLM---NGDNTGP-INIGNP-GEFTMLELAE 449 + D + L +++ NG G INIGNP E ++ EL E Sbjct: 547 IHDGIEALFRVIENRNGQCDGQIINIGNPHNEASIRELGE 586
>GME2_ORYSA (Q2R1V8) GDP-mannose 3,5-epimerase 2 (EC 5.1.3.18) (GDP-Man| 3,5-epimerase 2) Length = 371 Score = 57.0 bits (136), Expect = 2e-08 Identities = 37/116 (31%), Positives = 54/116 (46%), Gaps = 3/116 (2%) Frame = +3 Query: 111 PIGVRSCYDEGKRVAETLMXXYHRQHGIEIRIXRIFNTYGPRMNIDDGR--VVSNFIAXA 284 P + Y K E L Y + GIE R+ R N YGP GR + F A Sbjct: 161 PAEPQDAYGLEKLATEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKA 220 Query: 285 IRG-EALTVQKPGTQTRSFCYVADMVNGLMKLMNGDNTGPINIGNPGEFTMLELAE 449 + + + G QTRSF ++ + V G+++L D P+NIG+ +M E+AE Sbjct: 221 LTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAE 276
>ARNA_WIGBR (Q8D341) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 654 Score = 56.6 bits (135), Expect = 3e-08 Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 15/156 (9%) Frame = +3 Query: 27 RILLTSTSEVYG----DPLEHPQTEAYWGNVNPIGVRSCYDEGKRVAETLMXXYHRQHGI 194 RI+ STSEVYG D + + G + R Y K++ + ++ Y ++ + Sbjct: 425 RIIFPSTSEVYGMCKDDYFDEENSNLVTGAIK--NQRWIYSSSKQLLDRIIWAYGVKNNL 482 Query: 195 EIRIXRIFNTYGPRMN------IDDGRVVSNFIAXAIRGEALTVQKPGTQTRSFCYVADM 356 I R FN GP ++ + RV + I I G +T+ G Q R F + D Sbjct: 483 NFTIFRPFNWIGPGLDDFKIAEKQNARVTTQIIFNLINGLPVTIVNNGNQKRCFTDIDDG 542 Query: 357 VNGLMKLM----NGDNTGPINIGNP-GEFTMLELAE 449 + L +++ N N INIGNP E+T+++L + Sbjct: 543 IEALFEIIKNKNNKCNKKIINIGNPHNEYTIMQLTK 578
>RHM1_ARATH (Q9SYM5) Probable rhamnose biosynthetic enzyme 1 (EC 4.2.1.-) (EC| 1.1.1.-) Length = 669 Score = 56.6 bits (135), Expect = 3e-08 Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 3/144 (2%) Frame = +3 Query: 27 RILLTSTSEVYGDPLEHPQTEAYWGN--VNPIGVRSCYDEGKRVAETLMXXYHRQHGIEI 200 R + ST EVYG+ E +A GN + + + Y K AE L+ Y R +G+ + Sbjct: 126 RFIHVSTDEVYGETDE----DALVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPV 181 Query: 201 RIXRIFNTYGPRMNIDDGRVVSNFIAXAIRGEALTVQKPGTQTRSFCYVADMVNGLMKLM 380 R N YGP N +++ FI A+RG+ L + G+ RS+ Y D+ ++ Sbjct: 182 ITTRGNNVYGP--NQFPEKLIPKFILLAMRGQVLPIHGDGSNVRSYLYCEDVAEAFEVVL 239 Query: 381 NGDNTGPI-NIGNPGEFTMLELAE 449 + G + NIG E + ++A+ Sbjct: 240 HKGEVGHVYNIGTKKERRVNDVAK 263
>GME_ARATH (Q93VR3) GDP-mannose 3,5-epimerase (EC 5.1.3.18) (GDP-Man| 3,5-epimerase) Length = 377 Score = 56.6 bits (135), Expect = 3e-08 Identities = 38/116 (32%), Positives = 54/116 (46%), Gaps = 3/116 (2%) Frame = +3 Query: 111 PIGVRSCYDEGKRVAETLMXXYHRQHGIEIRIXRIFNTYGPRMNIDDGR--VVSNFIAXA 284 P + Y K E L Y++ GIE RI R N YGP GR + F A Sbjct: 167 PAEPQDAYGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKA 226 Query: 285 IRG-EALTVQKPGTQTRSFCYVADMVNGLMKLMNGDNTGPINIGNPGEFTMLELAE 449 + + G QTRSF ++ + V G+++L D P+NIG+ +M E+AE Sbjct: 227 QTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAE 282
>ARNA_PHOLL (Q7N3Q7) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 660 Score = 55.5 bits (132), Expect = 6e-08 Identities = 45/155 (29%), Positives = 74/155 (47%), Gaps = 14/155 (9%) Frame = +3 Query: 27 RILLTSTSEVYG--DPLEHPQTEAYWGNVNPIG-VRSCYDEGKRVAETLMXXYHRQHGIE 197 RI+ STSEVYG D E + ++ V PI R Y K++ + ++ Y + G++ Sbjct: 426 RIIFPSTSEVYGMCDDKEFDEDDSRL-IVGPINKQRWIYSVSKQLLDRVIWAYGEKEGLK 484 Query: 198 IRIXRIFNTYGPRMN------IDDGRVVSNFIAXAIRGEALTVQKPGTQTRSFCYVADMV 359 + R FN GPR++ I R ++ I + G + + G Q R F + D + Sbjct: 485 FTLFRPFNWMGPRLDNLNSARIGSSRAITQLILNLVEGSPIKLVDGGEQKRCFTDINDGI 544 Query: 360 NGLMKLMNGD----NTGPINIGNP-GEFTMLELAE 449 L +++ + INIGNP E ++ +LAE Sbjct: 545 EALFRIIENREGLCDGQIINIGNPTNEASIRQLAE 579
>ARNA_ECOLI (P77398) Bifunctional polymyxin resistance arnA protein (Polymyxin| resistance protein pmrI) [Includes: UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1 Length = 660 Score = 55.5 bits (132), Expect = 6e-08 Identities = 45/158 (28%), Positives = 72/158 (45%), Gaps = 17/158 (10%) Frame = +3 Query: 27 RILLTSTSEVYG----DPLEHPQTEAYWGNVNPIGVRSCYDEGKRVAETLMXXYHRQHGI 194 RI+ STSEVYG + + G VN R Y K++ + ++ Y + G+ Sbjct: 426 RIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNK--PRWIYSVSKQLLDRVIWAYGEKEGL 483 Query: 195 EIRIXRIFNTYGPRMN------IDDGRVVSNFIAXAIRGEALTVQKPGTQTRSFCYVADM 356 + + R FN GPR++ I R ++ I + G + + G Q R F + D Sbjct: 484 QFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDG 543 Query: 357 VNGLMKLMNGDNTGP------INIGNP-GEFTMLELAE 449 + L +++ +N G INIGNP E ++ EL E Sbjct: 544 IEALYRII--ENAGNRCDGEIINIGNPENEASIEELGE 579
>ARNA_ECOL6 (Q8FFM1) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 660 Score = 55.5 bits (132), Expect = 6e-08 Identities = 45/158 (28%), Positives = 72/158 (45%), Gaps = 17/158 (10%) Frame = +3 Query: 27 RILLTSTSEVYG----DPLEHPQTEAYWGNVNPIGVRSCYDEGKRVAETLMXXYHRQHGI 194 RI+ STSEVYG + + G VN R Y K++ + ++ Y + G+ Sbjct: 426 RIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNK--PRWIYSVSKQLLDRVIWAYGEKEGL 483 Query: 195 EIRIXRIFNTYGPRMN------IDDGRVVSNFIAXAIRGEALTVQKPGTQTRSFCYVADM 356 + + R FN GPR++ I R ++ I + G + + G Q R F + D Sbjct: 484 QFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDG 543 Query: 357 VNGLMKLMNGDNTGP------INIGNP-GEFTMLELAE 449 + L +++ +N G INIGNP E ++ EL E Sbjct: 544 IEALYRII--ENAGNRCDGEIINIGNPENEASIEELGE 579
>ARNA_ECO57 (Q8XDZ3) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 660 Score = 55.5 bits (132), Expect = 6e-08 Identities = 45/158 (28%), Positives = 72/158 (45%), Gaps = 17/158 (10%) Frame = +3 Query: 27 RILLTSTSEVYG----DPLEHPQTEAYWGNVNPIGVRSCYDEGKRVAETLMXXYHRQHGI 194 RI+ STSEVYG + + G VN R Y K++ + ++ Y + G+ Sbjct: 426 RIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNK--PRWIYSVSKQLLDRVIWAYGEKEGL 483 Query: 195 EIRIXRIFNTYGPRMN------IDDGRVVSNFIAXAIRGEALTVQKPGTQTRSFCYVADM 356 + + R FN GPR++ I R ++ I + G + + G Q R F + D Sbjct: 484 QFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDG 543 Query: 357 VNGLMKLMNGDNTGP------INIGNP-GEFTMLELAE 449 + L +++ +N G INIGNP E ++ EL E Sbjct: 544 IEALYRII--ENAGNRCDGEIINIGNPENEASIEELGE 579
>ARNA_YERPS (Q93PD8) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 667 Score = 55.1 bits (131), Expect = 8e-08 Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 15/156 (9%) Frame = +3 Query: 27 RILLTSTSEVYG----DPLEHPQTEAYWGNVNPIGVRSCYDEGKRVAETLMXXYHRQHGI 194 RI+ STSEVYG + + G +N R Y K++ + ++ Y + G+ Sbjct: 426 RIVFPSTSEVYGMCDDKEFDEDTSRLIVGPINK--QRWIYSVSKQLLDRVIWAYGVKEGL 483 Query: 195 EIRIXRIFNTYGPRMN------IDDGRVVSNFIAXAIRGEALTVQKPGTQTRSFCYVADM 356 + + R FN GPR++ I R ++ I + G + + G Q R F + D Sbjct: 484 KFTLFRPFNWMGPRLDNLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQKRCFTDIHDG 543 Query: 357 VNGLMKLM-NGDNTGP---INIGNP-GEFTMLELAE 449 + L +++ N D INIGNP E ++ ELAE Sbjct: 544 IEALFRIIENRDGCCDGQIINIGNPTNEASIRELAE 579
>ARNA_YERPE (Q8ZDX8) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 667 Score = 55.1 bits (131), Expect = 8e-08 Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 15/156 (9%) Frame = +3 Query: 27 RILLTSTSEVYG----DPLEHPQTEAYWGNVNPIGVRSCYDEGKRVAETLMXXYHRQHGI 194 RI+ STSEVYG + + G +N R Y K++ + ++ Y + G+ Sbjct: 426 RIVFPSTSEVYGMCDDKEFDEDTSRLIVGPINK--QRWIYSVSKQLLDRVIWAYGVKEGL 483 Query: 195 EIRIXRIFNTYGPRMN------IDDGRVVSNFIAXAIRGEALTVQKPGTQTRSFCYVADM 356 + + R FN GPR++ I R ++ I + G + + G Q R F + D Sbjct: 484 KFTLFRPFNWMGPRLDNLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQKRCFTDIHDG 543 Query: 357 VNGLMKLM-NGDNTGP---INIGNP-GEFTMLELAE 449 + L +++ N D INIGNP E ++ ELAE Sbjct: 544 IEALFRIIENRDGCCDGRIINIGNPTNEASIRELAE 579
>ARNA_SALTY (O52325) Bifunctional polymyxin resistance arnA protein (Polymyxin| resistance protein pmrI) [Includes: UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1 Length = 660 Score = 55.1 bits (131), Expect = 8e-08 Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 15/155 (9%) Frame = +3 Query: 27 RILLTSTSEVYG----DPLEHPQTEAYWGNVNPIGVRSCYDEGKRVAETLMXXYHRQHGI 194 R++ STSEVYG + ++ G VN R Y K++ + ++ Y + G+ Sbjct: 426 RVVFPSTSEVYGMCTDASFDEDKSNLIVGPVNK--PRWIYSVSKQLLDRVIWAYGEKEGL 483 Query: 195 EIRIXRIFNTYGPRMN------IDDGRVVSNFIAXAIRGEALTVQKPGTQTRSFCYVADM 356 + R FN GPR++ I R ++ I + G + + G Q R F + D Sbjct: 484 RFTLFRPFNWMGPRLDSLNAARIGSSRAITQLILNLVEGTPIKLIDGGQQKRCFTDIRDG 543 Query: 357 VNGLMKLM--NGDNTGP--INIGNP-GEFTMLELA 446 + L +++ +GD INIGNP E ++ ELA Sbjct: 544 IEALFRIIVNDGDRCDGKIINIGNPDNEASIQELA 578
>GME1_ORYSA (Q338B5) GDP-mannose 3,5-epimerase 1 (EC 5.1.3.18) (GDP-Man| 3,5-epimerase 1) (OsGME-1) Length = 378 Score = 55.1 bits (131), Expect = 8e-08 Identities = 37/116 (31%), Positives = 53/116 (45%), Gaps = 3/116 (2%) Frame = +3 Query: 111 PIGVRSCYDEGKRVAETLMXXYHRQHGIEIRIXRIFNTYGPRMNIDDGR--VVSNFIAXA 284 P + Y K E L Y + GIE R+ R N YGP GR + F A Sbjct: 168 PAEPQDAYGLEKLATEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKA 227 Query: 285 IRG-EALTVQKPGTQTRSFCYVADMVNGLMKLMNGDNTGPINIGNPGEFTMLELAE 449 + + G QTRSF ++ + V G+++L D P+NIG+ +M E+AE Sbjct: 228 QTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAE 283
>ARNA_PSEAE (Q9HY63) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 662 Score = 54.7 bits (130), Expect = 1e-07 Identities = 47/160 (29%), Positives = 77/160 (48%), Gaps = 15/160 (9%) Frame = +3 Query: 15 RVGARILLTSTSEVYG---DP-LEHPQTEAYWGNVNPIGVRSCYDEGKRVAETLMXXYHR 182 + G R++ STSEVYG DP + ++ G +N R Y K++ + ++ Y + Sbjct: 424 KYGKRVVFPSTSEVYGMCQDPDFDEDRSNLVVGPINK--QRWIYSVSKQLLDRVIWAYGQ 481 Query: 183 QHGIEIRIXRIFNTYGPRMN------IDDGRVVSNFIAXAIRGEALTVQKPGTQTRSFCY 344 Q G+ + R FN GPR++ I R ++ I + G + + G Q R F Sbjct: 482 Q-GLRFTLFRPFNWMGPRLDRLDSARIGSSRAITQLILHLVEGTPIRLVDGGAQKRCFTD 540 Query: 345 VADMVNGLMKLM---NGDNTGPI-NIGNP-GEFTMLELAE 449 V D + L +++ +G G I NIGNP E ++ +L E Sbjct: 541 VDDGIEALARIIDNRDGRCDGQIVNIGNPDNEASIRQLGE 580
>ARNA_SALTI (Q8Z540) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 660 Score = 54.7 bits (130), Expect = 1e-07 Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 15/155 (9%) Frame = +3 Query: 27 RILLTSTSEVYG----DPLEHPQTEAYWGNVNPIGVRSCYDEGKRVAETLMXXYHRQHGI 194 R++ STSEVYG + ++ G VN R Y K++ + ++ Y + G+ Sbjct: 426 RVVFPSTSEVYGMCTDASFDEDKSNLIVGPVNK--PRWIYSVSKQLLDRVIWAYGEKEGL 483 Query: 195 EIRIXRIFNTYGPRMN------IDDGRVVSNFIAXAIRGEALTVQKPGTQTRSFCYVADM 356 + R FN GPR++ I R ++ I + G + + G Q R F + D Sbjct: 484 RFTLFRPFNWMGPRLDSLNAARIGSSRAITQLILNLVEGTPIKLIDGGQQKRCFTDIRDG 543 Query: 357 VNGLMKLM--NGDNTGP--INIGNP-GEFTMLELA 446 + L +++ GD INIGNP E ++ ELA Sbjct: 544 IEALFRIIVNEGDRCDGKIINIGNPDNEASIQELA 578
>ARNA_SALPA (Q5PNA6) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 660 Score = 54.7 bits (130), Expect = 1e-07 Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 15/155 (9%) Frame = +3 Query: 27 RILLTSTSEVYG----DPLEHPQTEAYWGNVNPIGVRSCYDEGKRVAETLMXXYHRQHGI 194 R++ STSEVYG + ++ G VN R Y K++ + ++ Y + G+ Sbjct: 426 RVVFPSTSEVYGMCTDASFDEDKSNLIVGPVNK--PRWIYSVSKQLLDRVIWAYGEKEGL 483 Query: 195 EIRIXRIFNTYGPRMN------IDDGRVVSNFIAXAIRGEALTVQKPGTQTRSFCYVADM 356 + R FN GPR++ I R ++ I + G + + G Q R F + D Sbjct: 484 RFTLFRPFNWMGPRLDSLNAARIGSSRAITQLILNLVEGTPIKLIDGGQQKRCFTDIRDG 543 Query: 357 VNGLMKLM--NGDNTGP--INIGNP-GEFTMLELA 446 + L +++ GD INIGNP E ++ ELA Sbjct: 544 IEALFRIIVNEGDRCDGKIINIGNPDNEASIQELA 578
>ARNA_SALCH (P0C0R6) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 660 Score = 54.7 bits (130), Expect = 1e-07 Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 15/155 (9%) Frame = +3 Query: 27 RILLTSTSEVYG----DPLEHPQTEAYWGNVNPIGVRSCYDEGKRVAETLMXXYHRQHGI 194 R++ STSEVYG + ++ G VN R Y K++ + ++ Y + G+ Sbjct: 426 RVVFPSTSEVYGMCTDASFDEDKSNLIVGPVNK--PRWIYSVSKQLLDRVIWAYGEKEGL 483 Query: 195 EIRIXRIFNTYGPRMN------IDDGRVVSNFIAXAIRGEALTVQKPGTQTRSFCYVADM 356 + R FN GPR++ I R ++ I + G + + G Q R F + D Sbjct: 484 RFTLFRPFNWMGPRLDSLSAARIGSSRAITQLILNLVEGTPIKLIDGGQQKRCFTDIRDG 543 Query: 357 VNGLMKLM--NGDNTGP--INIGNP-GEFTMLELA 446 + L +++ GD INIGNP E ++ ELA Sbjct: 544 IEALFRIIVNEGDRCDGKIINIGNPDNEASIQELA 578
>RHM2_ARATH (Q9LPG6) Probable rhamnose biosynthetic enzyme 2 (EC 4.2.1.-) (EC| 1.1.1.-) (RHAMNOSE BIOSYNTHESIS 2 protein) (NDP-rhamnose synthase) (MUCILAGE-MODIFIED4 protein) (UDP-L-rhamnose synthase MUM4) Length = 667 Score = 53.9 bits (128), Expect = 2e-07 Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 3/143 (2%) Frame = +3 Query: 27 RILLTSTSEVYGDPLEHPQTEAYWGN--VNPIGVRSCYDEGKRVAETLMXXYHRQHGIEI 200 R + ST EVYG+ E +A GN + + + Y K AE L+ Y R +G+ + Sbjct: 128 RFIHVSTDEVYGETDE----DAAVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPV 183 Query: 201 RIXRIFNTYGPRMNIDDGRVVSNFIAXAIRGEALTVQKPGTQTRSFCYVADMVNGLMKLM 380 R N YGP N +++ FI A+ G+ L + G+ RS+ Y D+ ++ Sbjct: 184 ITTRGNNVYGP--NQFPEKMIPKFILLAMSGKPLPIHGDGSNVRSYLYCEDVAEAFEVVL 241 Query: 381 NGDNTGPI-NIGNPGEFTMLELA 446 + G + N+G E ++++A Sbjct: 242 HKGEIGHVYNVGTKRERRVIDVA 264
>RFFG_HAEIN (P44914) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 338 Score = 53.9 bits (128), Expect = 2e-07 Identities = 41/148 (27%), Positives = 66/148 (44%), Gaps = 1/148 (0%) Frame = +3 Query: 9 AKRVGARILLTSTSEVYGDPLEHPQTEAYWGNVNPIGVRSCYDEGKRVAETLMXXYHRQH 188 AK+ R ST EVYGD +E + +P S Y K + L+ +HR + Sbjct: 122 AKKTTFRFHHISTDEVYGDL---SLSEPAFTEQSPYHPSSPYSASKAASNHLVQAWHRTY 178 Query: 189 GIEIRIXRIFNTYGPRMNIDDGRVVSNFIAXAIRGEALTVQKPGTQTRSFCYVADMVNGL 368 G+ + I N YG + + +++ I+ A+ G+ L + G Q R + +V D V Sbjct: 179 GLPVIITNSSNNYGAYQHAE--KLIPLMISNAVMGKPLPIYGDGQQIRDWLFVEDHVQAS 236 Query: 369 MKLMNGDNTGP-INIGNPGEFTMLELAE 449 ++ G NIG E T LE+ + Sbjct: 237 YLVLTKGRVGENYNIGGNCEKTNLEVVK 264
>RHM3_ARATH (Q9LH76) Probable rhamnose biosynthetic enzyme 3 (EC 4.2.1.-) (EC| 1.1.1.-) Length = 664 Score = 53.9 bits (128), Expect = 2e-07 Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 3/143 (2%) Frame = +3 Query: 27 RILLTSTSEVYGDPLEHPQTEAYWGN--VNPIGVRSCYDEGKRVAETLMXXYHRQHGIEI 200 R + ST EVYG+ E +A GN + + + Y K AE L+ Y R +G+ + Sbjct: 126 RFIHVSTDEVYGETDE----DASVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPV 181 Query: 201 RIXRIFNTYGPRMNIDDGRVVSNFIAXAIRGEALTVQKPGTQTRSFCYVADMVNGL-MKL 377 R N YGP N +++ FI A+ G+ L + G+ RS+ Y D+ + L Sbjct: 182 ITTRGNNVYGP--NQFPEKLIPKFILLAMNGKPLPIHGDGSNVRSYLYCEDVAEAFEVVL 239 Query: 378 MNGDNTGPINIGNPGEFTMLELA 446 G+ NIG E ++++A Sbjct: 240 HKGEVNHVYNIGTTRERRVIDVA 262
>RFBB_NEIGO (P37761) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 346 Score = 53.1 bits (126), Expect = 3e-07 Identities = 42/147 (28%), Positives = 63/147 (42%), Gaps = 1/147 (0%) Frame = +3 Query: 12 KRVGARILLTSTSEVYGDPLEHPQTEAYWGNVNPIGVRSCYDEGKRVAETLMXXYHRQHG 191 KR R ST EVYGD T+ + P S Y K A+ L+ + R + Sbjct: 128 KREAFRFHHISTDEVYGDL---HGTDDLFTETTPYAPSSPYSASKAAADHLVRAWQRTYR 184 Query: 192 IEIRIXRIFNTYGPRMNIDDGRVVSNFIAXAIRGEALTVQKPGTQTRSFCYVADMVNGLM 371 + + N YGPR + +++ I A+ G+ L V G Q R + +V D L Sbjct: 185 LPSIVSNCSNNYGPRQFPE--KLIPLMILNALSGKPLPVYGDGAQIRDWLFVEDHARALY 242 Query: 372 KLMNGDNTG-PINIGNPGEFTMLELAE 449 +++ G NIG E T LE+ + Sbjct: 243 QVVTEGVVGETYNIGGHNEKTNLEVVK 269
>ARNA_PSE14 (Q48HZ1) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 663 Score = 52.8 bits (125), Expect = 4e-07 Identities = 46/156 (29%), Positives = 72/156 (46%), Gaps = 15/156 (9%) Frame = +3 Query: 27 RILLTSTSEVYG----DPLEHPQTEAYWGNVNPIGVRSCYDEGKRVAETLMXXYHRQHGI 194 R++ STSEVYG + G +N R Y K++ + ++ Y Q G+ Sbjct: 429 RVIFPSTSEVYGMCQDASFNEDTSNLIVGPINK--QRWIYSVSKQLLDRVIWAY-GQKGL 485 Query: 195 EIRIXRIFNTYGPRMN------IDDGRVVSNFIAXAIRGEALTVQKPGTQTRSFCYVADM 356 + + R FN GPR++ I R ++ I + G + + G Q R F VAD Sbjct: 486 QFTLFRPFNWMGPRLDRLDSARIGSSRAITQLILHLVEGTPIRLVDGGAQKRCFTDVADG 545 Query: 357 VNGLMKLM-NGD---NTGPINIGNP-GEFTMLELAE 449 + L +++ N D N INIGNP E ++ +L E Sbjct: 546 IEALARIIENRDGCCNGQIINIGNPDNEASIRQLGE 581
>ARNA_PSEF5 (Q4KC82) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 668 Score = 52.0 bits (123), Expect = 7e-07 Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 15/156 (9%) Frame = +3 Query: 27 RILLTSTSEVYG----DPLEHPQTEAYWGNVNPIGVRSCYDEGKRVAETLMXXYHRQHGI 194 R++ STSEVYG + + G +N R Y K++ + ++ Y + G+ Sbjct: 429 RVIFPSTSEVYGMCQDKNFDEDTSNLIVGPINK--QRWIYSVSKQLLDRVIWAYGAK-GL 485 Query: 195 EIRIXRIFNTYGPRMN------IDDGRVVSNFIAXAIRGEALTVQKPGTQTRSFCYVADM 356 + R FN GPR++ I R ++ I + G + + G Q R F +AD Sbjct: 486 NFTLFRPFNWMGPRLDRLDSARIGSSRAITQLILNLVEGTPIRLFDGGEQKRCFTDIADG 545 Query: 357 VNGLMKLMNGDNT----GPINIGNP-GEFTMLELAE 449 + L ++++ +N INIGNP E ++ +L E Sbjct: 546 IEALARIVDNENDCCNGQIINIGNPDNEASIRQLGE 581
>ARNA_SHIFL (Q83QT8) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 660 Score = 51.6 bits (122), Expect = 9e-07 Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 17/158 (10%) Frame = +3 Query: 27 RILLTSTSEVYG----DPLEHPQTEAYWGNVNPIGVRSCYDEGKRVAETLMXXYHRQHGI 194 RI+ STSEVYG + + G VN R Y K++ + ++ Y + G+ Sbjct: 426 RIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNK--PRWIYSVSKQLLDRVIWAYGEKEGL 483 Query: 195 EIRIXRIFNTYGPRMN------IDDGRVVSNFIAXAIRGEALTVQKPGTQTRSFCYVADM 356 + + FN GPR++ I R ++ I + G + + G Q R F + D Sbjct: 484 QFTLFLPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDG 543 Query: 357 VNGLMKLMNGDNTGP------INIGNP-GEFTMLELAE 449 + L ++ +N G INIGNP E ++ EL E Sbjct: 544 IEALYHII--ENAGNRCDGEIINIGNPENEASIEELGE 579
>ARNA_PSEU2 (Q4ZSZ2) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 664 Score = 50.8 bits (120), Expect = 2e-06 Identities = 45/156 (28%), Positives = 71/156 (45%), Gaps = 15/156 (9%) Frame = +3 Query: 27 RILLTSTSEVYG----DPLEHPQTEAYWGNVNPIGVRSCYDEGKRVAETLMXXYHRQHGI 194 R++ STSEVYG + G +N R Y K++ + ++ Y Q G+ Sbjct: 430 RVIFPSTSEVYGMCQDANFNEDTSNLIVGPINK--QRWIYSVSKQLLDRVIWAY-GQKGL 486 Query: 195 EIRIXRIFNTYGPRMN------IDDGRVVSNFIAXAIRGEALTVQKPGTQTRSFCYVADM 356 + + R FN GPR++ I R ++ I + G + + G Q R F V D Sbjct: 487 QFTLFRPFNWMGPRLDRLDSARIGSSRAITQLILHLVEGTPIRLVDGGAQKRCFTDVVDG 546 Query: 357 VNGLMKLM-NGD---NTGPINIGNP-GEFTMLELAE 449 + L +++ N D N INIGNP E ++ +L E Sbjct: 547 IEALARIIENRDGRCNGQIINIGNPDNEASIRQLGE 582
>Y1055_METJA (Q58455) Hypothetical protein MJ1055| Length = 326 Score = 48.5 bits (114), Expect = 8e-06 Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 1/131 (0%) Frame = +3 Query: 27 RILLTSTSEVYGDPLEHPQTEAYWGNVNPIGVRSCYDEGKRVAETLMXXYHRQHGIEIRI 206 +++ S+S VYG + P +E + PI S Y KR E + YH +GI++ Sbjct: 126 KVVYASSSSVYGGNRKIPFSEDDRVD-KPI---SLYASTKRSNELMAHVYHHLYGIKMIG 181 Query: 207 XRIFNTYGPRMNIDDGRVVSNFIAXAIRGEALTVQKPGTQTRSFCYVADMVNGLMKLMNG 386 R F YG D F + G+ + V G R F Y++D+V+G+++ + Sbjct: 182 LRFFTVYGEYGRPD--MAYFKFAKNILLGKEIEVYNYGNMERDFTYISDVVDGILRAIKK 239 Query: 387 DNTGPI-NIGN 416 D I N+GN Sbjct: 240 DFDYEIFNLGN 250
>FCL_CRIGR (Q8K3X2) GDP-L-fucose synthetase (EC 1.1.1.271) (Protein FX) (Red| cell NADP(H)-binding protein) (GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase) Length = 321 Score = 47.4 bits (111), Expect = 2e-05 Identities = 44/157 (28%), Positives = 64/157 (40%), Gaps = 10/157 (6%) Frame = +3 Query: 9 AKRVGARILLTSTSE-VYGDPLEHPQTEAYWGNVNPIGVRSCYDEGKRVAETLMXXYHRQ 185 A VG R +++ S ++ D +P E N P Y KR+ + Y +Q Sbjct: 101 AFEVGTRKVVSCLSTCIFPDKTTYPIDETMIHNGPPHSSNFGYSYAKRMIDVQNRAYFQQ 160 Query: 186 HGIEIRIXRIFNTYGP--RMNIDDGRVVSNFI----AXAIRGEALTVQKPGTQTRSFCYV 347 HG N +GP NI+DG V+ I G ALTV G R F Y Sbjct: 161 HGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSNGSALTVWGTGKPRRQFIYS 220 Query: 348 ADMVNGLMKLMNGDN-TGPI--NIGNPGEFTMLELAE 449 D+ + ++ N PI ++G E ++ E AE Sbjct: 221 LDLARLFIWVLREYNEVEPIILSVGEEDEVSIKEAAE 257
>FCL_HUMAN (Q13630) GDP-L-fucose synthetase (EC 1.1.1.271) (Protein FX) (Red| cell NADP(H)-binding protein) (GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase) Length = 321 Score = 46.6 bits (109), Expect = 3e-05 Identities = 44/157 (28%), Positives = 65/157 (41%), Gaps = 10/157 (6%) Frame = +3 Query: 9 AKRVGARILLTSTSE-VYGDPLEHPQTEAYWGNVNPIGVRSCYDEGKRVAETLMXXYHRQ 185 A VGAR +++ S ++ D +P E N P Y KR+ + Y +Q Sbjct: 101 AFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQ 160 Query: 186 HGIEIRIXRIFNTYGP--RMNIDDGRVVSNFI----AXAIRGEALTVQKPGTQTRSFCYV 347 +G N +GP NI+DG V+ I G ALTV G R F Y Sbjct: 161 YGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYS 220 Query: 348 ADMVNGLMKLMNGDN-TGPI--NIGNPGEFTMLELAE 449 D+ + ++ N PI ++G E ++ E AE Sbjct: 221 LDLAQLFIWVLREYNEVEPIILSVGEEDEVSIKEAAE 257
>FCL_PONPY (Q5RBE5) GDP-L-fucose synthetase (EC 1.1.1.271) (Protein FX) (Red| cell NADP(H)-binding protein) (GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase) Length = 321 Score = 45.1 bits (105), Expect = 8e-05 Identities = 44/157 (28%), Positives = 65/157 (41%), Gaps = 10/157 (6%) Frame = +3 Query: 9 AKRVGARILLTSTSE-VYGDPLEHPQTEAYWGNVNPIGVRSCYDEGKRVAETLMXXYHRQ 185 A VGAR +++ S ++ D +P E N P Y KR+ + Y +Q Sbjct: 101 AFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHSSNFGYSYVKRMIDVQNRAYFQQ 160 Query: 186 HGIEIRIXRIFNTYGP--RMNIDDGRVVSNFI----AXAIRGEALTVQKPGTQTRSFCYV 347 +G N +GP NI+DG V+ I G ALTV G R F Y Sbjct: 161 YGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGKPRRQFIYS 220 Query: 348 ADMVNGLMKLMNGDN-TGPI--NIGNPGEFTMLELAE 449 D+ + ++ N PI ++G E ++ E AE Sbjct: 221 LDLAQLFIWVLREYNEVEPIILSVGEDDEVSIKEAAE 257
>FCL_MOUSE (P23591) GDP-L-fucose synthetase (EC 1.1.1.271) (Protein FX) (Red| cell NADP(H)-binding protein) (GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase) (Transplantation antigen P35B) (Tum-P35B antigen) Length = 321 Score = 45.1 bits (105), Expect = 8e-05 Identities = 44/157 (28%), Positives = 62/157 (39%), Gaps = 10/157 (6%) Frame = +3 Query: 9 AKRVGARILLTSTSE-VYGDPLEHPQTEAYWGNVNPIGVRSCYDEGKRVAETLMXXYHRQ 185 A VGAR +++ S ++ D +P E N P Y KR+ + Y +Q Sbjct: 101 AFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHSSNFGYSYAKRMIDVQNRAYFQQ 160 Query: 186 HGIEIRIXRIFNTYGP--RMNIDDGRVVSNFI----AXAIRGEALTVQKPGTQTRSFCYV 347 HG N +GP NI+DG V+ I ALTV G R F Y Sbjct: 161 HGCTFTAVIPTNVFGPYDNFNIEDGHVLPGLIHKVHLAKSSDSALTVWGTGKPRRQFIYS 220 Query: 348 ADMVN-GLMKLMNGDNTGPI--NIGNPGEFTMLELAE 449 D+ + L PI ++G E ++ E AE Sbjct: 221 LDLARLFIWVLREYSEVEPIILSVGEEDEVSIKEAAE 257
>Y4AF_RHISN (P55353) Hypothetical 34.7 kDa protein y4aF| Length = 314 Score = 44.7 bits (104), Expect = 1e-04 Identities = 33/103 (32%), Positives = 48/103 (46%), Gaps = 8/103 (7%) Frame = +3 Query: 162 LMXXYHRQHGIEIRIXRIFNTYGPR--MNIDDGRVVSNFIAXAIRGE-----ALTVQKPG 320 L Y +Q+G N YGPR +++ VV I A + L++ G Sbjct: 150 LCQAYRKQYGANFISAMPTNLYGPRDKFDLNSSHVVPALIRKAHEAKIKDLGCLSIWGSG 209 Query: 321 TQTRSFCYVADMVNGLMKLMNG-DNTGPINIGNPGEFTMLELA 446 T TR F Y D + L+ L+ T INIG+ GE +++ELA Sbjct: 210 TPTRDFLYSEDCSDALVFLLKHYSETEHINIGSGGEISIIELA 252
>RFBB_RHISN (P55462) Probable dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 350 Score = 44.7 bits (104), Expect = 1e-04 Identities = 35/140 (25%), Positives = 59/140 (42%), Gaps = 1/140 (0%) Frame = +3 Query: 27 RILLTSTSEVYGDPLEHPQTEAYWGNVNPIGVRSCYDEGKRVAETLMXXYHRQHGIEIRI 206 ++L ST EVYG + Q E V+P S Y K ++ + R +G+ + I Sbjct: 126 KMLHVSTDEVYGSLGDRGQFE----EVSPYDPSSPYSASKAASDHFATAWQRTYGLPVVI 181 Query: 207 XRIFNTYGPRMNIDDGRVVSNFIAXAIRGEALTVQKPGTQTRSFCYVADMVNGLMKLMNG 386 N YGP + +++ I A+ + L V G+ R + YV D L ++ Sbjct: 182 SNCSNNYGPFHFPE--KLIPLMILNALDRKPLPVYGTGSNIRDWLYVDDHARALWLIVRE 239 Query: 387 DNTG-PINIGNPGEFTMLEL 443 G N+G E +++ Sbjct: 240 GRPGEKYNVGGRNELRNIDV 259
>LPSL_RHIME (O54067) UDP-glucuronate 5'-epimerase (EC 5.1.3.12) (UDP-glucuronic| acid epimerase) Length = 341 Score = 42.4 bits (98), Expect = 5e-04 Identities = 32/125 (25%), Positives = 55/125 (44%), Gaps = 1/125 (0%) Frame = +3 Query: 6 LAKRVGAR-ILLTSTSEVYGDPLEHPQTEAYWGNVNPIGVRSCYDEGKRVAETLMXXYHR 182 LAK + + ++L STS +YG + P EA + P+ + Y K+ E + Y Sbjct: 113 LAKAIAPKHLMLASTSSIYGANEKIPFAEADRAD-EPM---TLYAATKKSMELMAHSYAH 168 Query: 183 QHGIEIRIXRIFNTYGPRMNIDDGRVVSNFIAXAIRGEALTVQKPGTQTRSFCYVADMVN 362 + + R F YGP D + F+ G + + G +R F Y+ D+V Sbjct: 169 LYKVPTTSFRFFTVYGPWGRPD--MALFKFVDAIHNGRPIDIYGEGRMSRDFTYIDDLVE 226 Query: 363 GLMKL 377 +++L Sbjct: 227 SIVRL 231
>ARAE2_ORYSA (Q8H0B6) Putative UDP-arabinose 4-epimerase 2 (EC 5.1.3.5)| (UDP-D-xylose 4-epimerase 2) (UDP-galactose 4-epimerase-like protein 2) (OsUEL-2) Length = 391 Score = 41.2 bits (95), Expect = 0.001 Identities = 39/150 (26%), Positives = 65/150 (43%), Gaps = 19/150 (12%) Frame = +3 Query: 30 ILLTSTSEVYGDPLEHPQTEAYWGN-VNPIGVRSCYDEGKRVAETLMXXYHRQHGIEIRI 206 ++ +ST YG+P P TEA N +NP Y + K++AE ++ + ++ + + I Sbjct: 170 LIYSSTCATYGEPDTMPITEATPQNPINP------YGKAKKMAEDIILDFSKRSEMAVMI 223 Query: 207 XRIFNTYG----------PRMNIDDGRVVSNFIAXAIRG--EALTVQ------KPGTQTR 332 R FN G PR + + +S A G L V+ GT R Sbjct: 224 LRYFNVIGSDPGGRLGEAPRPELREHGRISGACFDAALGIIPGLKVRGTDYPTADGTCIR 283 Query: 333 SFCYVADMVNGLMKLMNGDNTGPINIGNPG 422 + V D+V+ +K ++ G + I N G Sbjct: 284 DYIDVTDLVDAHVKALDKAQPGKVGIYNVG 313
>FCL1_ORYSA (Q67WR2) Probable GDP-L-fucose synthase 1 (EC 1.1.1.271)| (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase 1) Length = 328 Score = 39.7 bits (91), Expect = 0.003 Identities = 38/151 (25%), Positives = 62/151 (41%), Gaps = 10/151 (6%) Frame = +3 Query: 27 RILLTSTSEVYGD--PLEHPQTEAYWGNVNPIGVRSCYDEGKRVAETLMXXYHRQHGIEI 200 ++L +S +Y P P+ G + P Y K + Y QHG + Sbjct: 117 KLLFLGSSCIYPKFAPQPIPENSLLSGPLEP--TNEWYAVAKIAGIKMCQAYRIQHGFDA 174 Query: 201 RIXRIFNTYGPRMNI--DDGRVVSNFI-----AXAIRGEALTVQKPGTQTRSFCYVADMV 359 N YGP+ N ++ V+ I A A + V G+ R F +V D+ Sbjct: 175 ISAMPTNLYGPQDNFHPENSHVLPALIRRFHEAKASNAAEVVVWGTGSPLREFLHVDDLA 234 Query: 360 NGLMKLMNG-DNTGPINIGNPGEFTMLELAE 449 + ++ LM+ +N+G+ E T+ ELAE Sbjct: 235 DAVIFLMDHYSGLEHVNVGSGSEVTIKELAE 265
>FCL_ECOLI (P32055) GDP-L-fucose synthetase (EC 1.1.1.271)| (GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase) Length = 321 Score = 38.9 bits (89), Expect = 0.006 Identities = 42/160 (26%), Positives = 65/160 (40%), Gaps = 19/160 (11%) Frame = +3 Query: 27 RILLTSTSEVYGDPLEHP--QTEAYWGNVNPIGVRSCYDEGKRVAETLMXXYHRQHGIEI 200 ++L +S +Y + P ++E G + P Y K L Y+RQ+G + Sbjct: 101 KLLFLGSSCIYPKLAKQPMAESELLQGTLEP--TNEPYAIAKIAGIKLCESYNRQYGRDY 158 Query: 201 RIXRIFNTYGPRMNI--DDGRVVSNFI-----AXAIRGEALTVQKPGTQTRSFCYVADMV 359 R N YGP N + V+ + A A + V GT R F +V DM Sbjct: 159 RSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQNAPDVVVWGSGTPMREFLHVDDMA 218 Query: 360 NGLMKLMN------GDNTGP----INIGNPGEFTMLELAE 449 + +M +NT P IN+G + T+ ELA+ Sbjct: 219 AASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQ 258
>GALE_STRTR (P21977) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 332 Score = 38.1 bits (87), Expect = 0.010 Identities = 39/158 (24%), Positives = 66/158 (41%), Gaps = 18/158 (11%) Frame = +3 Query: 30 ILLTSTSEVYGDPLEHPQTEAYWGN-VNPIGVRSCYDEGKRVAETLMXXYHRQHGIEIRI 206 I+ +ST+ YG P E P E N +NP Y E K + ET+M + +GI+ Sbjct: 114 IVFSSTAATYGIPEEIPILETTPQNPINP------YGESKLMMETIMKWSDQAYGIKYVP 167 Query: 207 XRIFNTYGPRMNIDDGRVVSNF--------IAXAIRGEALTV-----QKPGTQTRSFCYV 347 R FN G + + R S +A +R + + GT R + + Sbjct: 168 LRYFNVAGANLMVRLVRTRSETHLLPIILQVAQGVREKIMIFGDDYNTPDGTNVRDYVHP 227 Query: 348 ADMVN----GLMKLMNGDNTGPINIGNPGEFTMLELAE 449 D+ + + L G+ + N+G+ F+ L++ E Sbjct: 228 FDLADAHLLAVEYLRKGNESTAFNLGSSTGFSNLQILE 265
>GALE_STRMU (P96995) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 333 Score = 36.6 bits (83), Expect = 0.030 Identities = 39/162 (24%), Positives = 67/162 (41%), Gaps = 22/162 (13%) Frame = +3 Query: 30 ILLTSTSEVYGDPLEHPQTEAYWGN-VNPIGVRSCYDEGKRVAETLMXXYHRQHGIEIRI 206 I+ +ST+ YG P E P E +NP Y E K + ET+M R +GI+ Sbjct: 114 IVFSSTAATYGIPDEIPIKETTPQRPINP------YGESKLMMETIMKWSDRAYGIKFVP 167 Query: 207 XRIFNTYGPRMNIDDGRVVSNF------------IAXAIRGEALTV-----QKPGTQTRS 335 R FN G + DG + + +A +R + + GT R Sbjct: 168 LRYFNVAGAK---PDGSIGEDHSPETHLLPIILQVAQGVREKIMIFGDDYNTPDGTNVRD 224 Query: 336 FCYVADMVNGLMKLMN----GDNTGPINIGNPGEFTMLELAE 449 + + D+ + + +N G+ + N+G+ F+ L++ E Sbjct: 225 YVHPFDLADAHLLALNYLRQGNPSTAFNLGSSTGFSNLQILE 266
>FCL2_ORYSA (Q67WR5) Putative GDP-L-fucose synthase 2 (EC 1.1.1.271)| (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase 2) Length = 347 Score = 33.9 bits (76), Expect = 0.19 Identities = 35/157 (22%), Positives = 61/157 (38%), Gaps = 10/157 (6%) Frame = +3 Query: 9 AKRVGA--RILLTSTSEVYGDPLEHPQTEAYWGNVNPIGVRSCYDEGKRVAETLMXXYHR 182 A+R G+ ++L+ ++S +Y P E+ P Y K + Sbjct: 125 ARRCGSVRKLLVLASSTIYPADAPQPTPESALLTGPPAEGSEWYAIPKIAGIKMCQAVRA 184 Query: 183 QHGIEIRIXRIFNTYGPRMNIDDGR------VVSNFIAXAIRGEA-LTVQKPGTQTRSFC 341 ++G++ N YGPR ++ F + G + V G R F Sbjct: 185 EYGLDAIAAAPNNLYGPRHPFPPEHSHVIPALIRRFHRAKLEGAGEVAVWGSGAAAREFT 244 Query: 342 YVADMVNGLMKLMNG-DNTGPINIGNPGEFTMLELAE 449 +V D+ ++ LM +N+G+ E T+ ELAE Sbjct: 245 HVDDLAEAVVVLMERYSGEEHVNVGSGEEVTVRELAE 281
>HLDD_VIBVY (Q7MPN6) ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20)| (ADP-L-glycero-beta-D-manno-heptose-6-epimerase) (ADP-glyceromanno-heptose 6-epimerase) (ADP-hep 6-epimerase) (AGME) Length = 313 Score = 33.5 bits (75), Expect = 0.25 Identities = 38/154 (24%), Positives = 60/154 (38%), Gaps = 15/154 (9%) Frame = +3 Query: 33 LLTSTSEVYGDPLEHPQTEAYWGNVNPIG---------VRSCYDEGKRVAETLMXXYHRQ 185 L S++ YG+ + Y G +N G VR + + + ETL Sbjct: 112 LYASSAATYGETTVFKEEREYEGALNVYGYSKQQFDNYVRRLWQDAEEHGETLS------ 165 Query: 186 HGIEIRIXRIFNTYGPRMNIDDGRVVSNFIAXAIRGEALTVQKP----GTQ--TRSFCYV 347 +I R FN YGPR G + S +A + + L + P G++ R F YV Sbjct: 166 ---QITGFRYFNVYGPREQ-HKGSMAS--VAFHLNNQILAGENPKLFAGSEQFKRDFIYV 219 Query: 348 ADMVNGLMKLMNGDNTGPINIGNPGEFTMLELAE 449 D+ + M +G N G + E+A+ Sbjct: 220 GDVCKVNLWFMQNGVSGIFNCGTGNAESFEEVAK 253
>HLDD_VIBVU (Q8DE09) ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20)| (ADP-L-glycero-beta-D-manno-heptose-6-epimerase) (ADP-glyceromanno-heptose 6-epimerase) (ADP-hep 6-epimerase) (AGME) Length = 313 Score = 33.5 bits (75), Expect = 0.25 Identities = 38/154 (24%), Positives = 60/154 (38%), Gaps = 15/154 (9%) Frame = +3 Query: 33 LLTSTSEVYGDPLEHPQTEAYWGNVNPIG---------VRSCYDEGKRVAETLMXXYHRQ 185 L S++ YG+ + Y G +N G VR + + + ETL Sbjct: 112 LYASSAATYGETTVFKEEREYEGALNVYGYSKQQFDNYVRRLWQDAEEHGETLS------ 165 Query: 186 HGIEIRIXRIFNTYGPRMNIDDGRVVSNFIAXAIRGEALTVQKP----GTQ--TRSFCYV 347 +I R FN YGPR G + S +A + + L + P G++ R F YV Sbjct: 166 ---QITGFRYFNVYGPREQ-HKGSMAS--VAFHLNNQILAGENPKLFAGSEQFKRDFIYV 219 Query: 348 ADMVNGLMKLMNGDNTGPINIGNPGEFTMLELAE 449 D+ + M +G N G + E+A+ Sbjct: 220 GDVCKVNLWFMQNGVSGIFNCGTGNAESFEEVAK 253
>FCL1_ARATH (O49213) GDP-L-fucose synthase 1 (EC 1.1.1.271)| (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase 1) (AtGER1) (AtFX) Length = 312 Score = 33.1 bits (74), Expect = 0.33 Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 8/100 (8%) Frame = +3 Query: 174 YHRQHGIEIRIXRIFNTYGPRMNIDDGR------VVSNFIAXAIRG-EALTVQKPGTQTR 332 Y QHG + N YGP N ++ F + G E + V G+ R Sbjct: 152 YRIQHGWDAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAEEVVVWGTGSPLR 211 Query: 333 SFCYVADMVNGLMKLMNG-DNTGPINIGNPGEFTMLELAE 449 F +V D+ + + L++ +NIG+ E T+ ELAE Sbjct: 212 EFLHVDDLADACVFLLDRYSGLEHVNIGSGQEVTIRELAE 251
>HLDD_PASMU (Q9CL97) ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20)| (ADP-L-glycero-beta-D-manno-heptose-6-epimerase) (ADP-glyceromanno-heptose 6-epimerase) (ADP-hep 6-epimerase) (AGME) Length = 310 Score = 32.3 bits (72), Expect = 0.56 Identities = 34/142 (23%), Positives = 59/142 (41%), Gaps = 6/142 (4%) Frame = +3 Query: 42 STSEVYGDPLEHPQTEAYWGNVNPIGVRSCYDEGKRVAETLMXXYHRQHGIEIRIXRIFN 221 S++ YGD E + + +N Y K + + + + + R FN Sbjct: 115 SSAATYGDKTEFREEREFEAPLN------VYGYSKFLFDQYVRAILPEANSPVCGFRYFN 168 Query: 222 TYGPRMNIDDGRVVSNFIAXAIRGEALTVQKP----GTQ--TRSFCYVADMVNGLMKLMN 383 YGPR N G + S +A + + L +KP G++ R F YV D+ + Sbjct: 169 VYGPREN-HKGAMAS--VAFHLNNQILKGEKPKLFAGSEHFRRDFVYVGDVAAVNIWCWQ 225 Query: 384 GDNTGPINIGNPGEFTMLELAE 449 + +G N+G + LE+A+ Sbjct: 226 NNISGIYNLGTGNAESFLEVAK 247
>NOEL_RHISN (P55354) GDP-mannose 4,6-dehydratase (EC 4.2.1.47) (GDP-D-mannose| dehydratase) Length = 351 Score = 32.0 bits (71), Expect = 0.73 Identities = 25/77 (32%), Positives = 31/77 (40%) Frame = +3 Query: 3 GLAKRVGARILLTSTSEVYGDPLEHPQTEAYWGNVNPIGVRSCYDEGKRVAETLMXXYHR 182 GL R R STSE+YG E PQ E P RS Y K A ++ Y Sbjct: 123 GLTNRT--RFYQASTSELYGLAQESPQNEK-----TPFYPRSPYAAAKLYAYWIVVNYRE 175 Query: 183 QHGIEIRIXRIFNTYGP 233 +G+ +FN P Sbjct: 176 AYGMHASNGILFNHESP 192
>GM4D1_VIBCH (Q06952) Probable GDP-mannose 4,6-dehydratase (EC 4.2.1.47)| (GDP-D-mannose dehydratase) Length = 373 Score = 31.6 bits (70), Expect = 0.95 Identities = 26/78 (33%), Positives = 32/78 (41%) Frame = +3 Query: 3 GLAKRVGARILLTSTSEVYGDPLEHPQTEAYWGNVNPIGVRSCYDEGKRVAETLMXXYHR 182 GL K+ + STSE+YG E PQ E P RS Y K A + Y Sbjct: 122 GLTKKT--KFYQASTSELYGLVQEIPQKE-----TTPFYPRSPYAVAKMYAYWITINYRE 174 Query: 183 QHGIEIRIXRIFNTYGPR 236 +GI +FN PR Sbjct: 175 SYGIYACNGILFNHESPR 192
>EXOB_AZOBR (Q59083) UDP-glucose 4-epimerase (EC 5.1.3.2) (UDP-galactose| 4-epimerase) (Galactowaldenase) Length = 348 Score = 31.2 bits (69), Expect = 1.2 Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 22/159 (13%) Frame = +3 Query: 3 GLAKRVGA-RILLTSTSEVYGDPLEHP-QTEAYWGNVNPIGVRSCYDEGKRVAETLMXXY 176 G R G +++ +ST+ VYG P P + +A +NP G K + E ++ Sbjct: 110 GACLRAGIDKVVFSSTAAVYGAPESVPIREDAPTVPINPYGA------SKLMTEQMLRDA 163 Query: 177 HRQHGIEIRIXRIFNTYGPRMNIDDGR---VVSNFIAXAIRGEALTVQKP---------- 317 HG+ I R FN G G+ V ++ I A +AL ++P Sbjct: 164 GAAHGLRSVILRYFNVAGADPAGRTGQATPVATHLIKVAC--QALLGRRPPLAIFGTDYD 221 Query: 318 ---GTQTRSFCYVADM----VNGLMKLMNGDNTGPINIG 413 GT R + +V+D+ V L+ L G + +N G Sbjct: 222 TPDGTCIRDYIHVSDLADAHVLALLHLRRGGGSLLMNCG 260
>GM4D_SHIFL (P0AC91) GDP-mannose 4,6-dehydratase (EC 4.2.1.47) (GDP-D-mannose| dehydratase) Length = 373 Score = 31.2 bits (69), Expect = 1.2 Identities = 36/130 (27%), Positives = 48/130 (36%) Frame = +3 Query: 3 GLAKRVGARILLTSTSEVYGDPLEHPQTEAYWGNVNPIGVRSCYDEGKRVAETLMXXYHR 182 GL K+ R STSE+YG E PQ E P RS Y K A + Y Sbjct: 121 GLEKKT--RFYQASTSELYGLVQEIPQKE-----TTPFYPRSPYAVAKLYAYWITVNYRE 173 Query: 183 QHGIEIRIXRIFNTYGPRMNIDDGRVVSNFIAXAIRGEALTVQKPGTQTRSFCYVADMVN 362 +G+ +FN PR RGE +K TR+ +A + Sbjct: 174 SYGMYACNGILFNHESPR-----------------RGETFVTRK---ITRAIANIAQGLE 213 Query: 363 GLMKLMNGDN 392 + L N D+ Sbjct: 214 SCLYLGNMDS 223
>GM4D_ECOLI (P0AC88) GDP-mannose 4,6-dehydratase (EC 4.2.1.47) (GDP-D-mannose| dehydratase) Length = 373 Score = 31.2 bits (69), Expect = 1.2 Identities = 36/130 (27%), Positives = 48/130 (36%) Frame = +3 Query: 3 GLAKRVGARILLTSTSEVYGDPLEHPQTEAYWGNVNPIGVRSCYDEGKRVAETLMXXYHR 182 GL K+ R STSE+YG E PQ E P RS Y K A + Y Sbjct: 121 GLEKKT--RFYQASTSELYGLVQEIPQKE-----TTPFYPRSPYAVAKLYAYWITVNYRE 173 Query: 183 QHGIEIRIXRIFNTYGPRMNIDDGRVVSNFIAXAIRGEALTVQKPGTQTRSFCYVADMVN 362 +G+ +FN PR RGE +K TR+ +A + Sbjct: 174 SYGMYACNGILFNHESPR-----------------RGETFVTRK---ITRAIANIAQGLE 213 Query: 363 GLMKLMNGDN 392 + L N D+ Sbjct: 214 SCLYLGNMDS 223
>GM4D_ECOL6 (P0AC89) GDP-mannose 4,6-dehydratase (EC 4.2.1.47) (GDP-D-mannose| dehydratase) Length = 373 Score = 31.2 bits (69), Expect = 1.2 Identities = 36/130 (27%), Positives = 48/130 (36%) Frame = +3 Query: 3 GLAKRVGARILLTSTSEVYGDPLEHPQTEAYWGNVNPIGVRSCYDEGKRVAETLMXXYHR 182 GL K+ R STSE+YG E PQ E P RS Y K A + Y Sbjct: 121 GLEKKT--RFYQASTSELYGLVQEIPQKE-----TTPFYPRSPYAVAKLYAYWITVNYRE 173 Query: 183 QHGIEIRIXRIFNTYGPRMNIDDGRVVSNFIAXAIRGEALTVQKPGTQTRSFCYVADMVN 362 +G+ +FN PR RGE +K TR+ +A + Sbjct: 174 SYGMYACNGILFNHESPR-----------------RGETFVTRK---ITRAIANIAQGLE 213 Query: 363 GLMKLMNGDN 392 + L N D+ Sbjct: 214 SCLYLGNMDS 223
>GM4D_ECO57 (P0AC90) GDP-mannose 4,6-dehydratase (EC 4.2.1.47) (GDP-D-mannose| dehydratase) Length = 373 Score = 31.2 bits (69), Expect = 1.2 Identities = 36/130 (27%), Positives = 48/130 (36%) Frame = +3 Query: 3 GLAKRVGARILLTSTSEVYGDPLEHPQTEAYWGNVNPIGVRSCYDEGKRVAETLMXXYHR 182 GL K+ R STSE+YG E PQ E P RS Y K A + Y Sbjct: 121 GLEKKT--RFYQASTSELYGLVQEIPQKE-----TTPFYPRSPYAVAKLYAYWITVNYRE 173 Query: 183 QHGIEIRIXRIFNTYGPRMNIDDGRVVSNFIAXAIRGEALTVQKPGTQTRSFCYVADMVN 362 +G+ +FN PR RGE +K TR+ +A + Sbjct: 174 SYGMYACNGILFNHESPR-----------------RGETFVTRK---ITRAIANIAQGLE 213 Query: 363 GLMKLMNGDN 392 + L N D+ Sbjct: 214 SCLYLGNMDS 223
>YFCH_ECOLI (P77775) Hypothetical UPF0105 protein yfcH| Length = 297 Score = 30.8 bits (68), Expect = 1.6 Identities = 12/34 (35%), Positives = 23/34 (67%) Frame = +3 Query: 318 GTQTRSFCYVADMVNGLMKLMNGDNTGPINIGNP 419 G Q ++ ++ DMVNG++ L++ + GP N+ +P Sbjct: 192 GRQYLAWIHIDDMVNGILWLLDNELRGPFNMVSP 225
>HLDD_RHILO (Q98I52) ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20)| (ADP-L-glycero-beta-D-manno-heptose-6-epimerase) (ADP-glyceromanno-heptose 6-epimerase) (ADP-hep 6-epimerase) (AGME) Length = 316 Score = 30.4 bits (67), Expect = 2.1 Identities = 37/137 (27%), Positives = 55/137 (40%), Gaps = 10/137 (7%) Frame = +3 Query: 33 LLTSTSEVYGDPLEHPQTEAYWGNVNPIGV-RSCYDEGKRVAETLMXXYHRQHGIEIRIX 209 L S++ VYG E + A +N + +D+ V T+ H Q + Sbjct: 111 LYASSASVYGGGSEFREEPALERPLNVYAYSKKLFDD--YVRRTVFDTDHSQ----VAGL 164 Query: 210 RIFNTYGPRMNIDDGRVVS---NFIAXAIRGE------ALTVQKPGTQTRSFCYVADMVN 362 R FN YGPR G + S + RGE A PG Q+R F +V D+ + Sbjct: 165 RYFNVYGPR-EAHKGAMASVAFHLFNQVERGENPRLFGAYDGFGPGEQSRDFIHVGDVAD 223 Query: 363 GLMKLMNGDNTGPINIG 413 + L ++G N G Sbjct: 224 VNLWLWKRGSSGIFNCG 240
>GM4D2_VIBCH (Q56598) Probable GDP-mannose 4,6-dehydratase (EC 4.2.1.47)| (GDP-D-mannose dehydratase) Length = 372 Score = 30.4 bits (67), Expect = 2.1 Identities = 22/65 (33%), Positives = 28/65 (43%) Frame = +3 Query: 42 STSEVYGDPLEHPQTEAYWGNVNPIGVRSCYDEGKRVAETLMXXYHRQHGIEIRIXRIFN 221 STSE+YG E PQ E P RS Y K A ++ Y +G+ +FN Sbjct: 132 STSELYGLVQETPQKE-----TTPFYPRSPYAVAKMYAYWIVVNYRESYGMYACNGILFN 186 Query: 222 TYGPR 236 PR Sbjct: 187 HESPR 191
>NOEL_RHIFR (O85713) GDP-mannose 4,6-dehydratase (EC 4.2.1.47) (GDP-D-mannose| dehydratase) Length = 351 Score = 30.4 bits (67), Expect = 2.1 Identities = 22/69 (31%), Positives = 28/69 (40%) Frame = +3 Query: 27 RILLTSTSEVYGDPLEHPQTEAYWGNVNPIGVRSCYDEGKRVAETLMXXYHRQHGIEIRI 206 R STSE+YG E PQ E P RS Y K A ++ Y +G+ Sbjct: 129 RFYQASTSELYGLAQEIPQNEK-----TPFYPRSPYAAAKLYAYWIVVNYREAYGMHASN 183 Query: 207 XRIFNTYGP 233 +FN P Sbjct: 184 GILFNHESP 192
>HLDD_BURPS (Q9WWX6) ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20)| (ADP-L-glycero-beta-D-manno-heptose-6-epimerase) (ADP-glyceromanno-heptose 6-epimerase) (ADP-hep 6-epimerase) (AGME) Length = 330 Score = 30.0 bits (66), Expect = 2.8 Identities = 34/141 (24%), Positives = 54/141 (38%), Gaps = 10/141 (7%) Frame = +3 Query: 21 GARILLTSTSEVYGDPLEHPQTEAYWGNVNPIGVRSCYDEGKRVAETLMXXYHRQHGIEI 200 G + L S++ +YG + + +N Y K + + ++ +I Sbjct: 108 GTQFLYASSAAIYGGSSRFVEAREFEAPLN------VYGYSKFLFDQVIRRVMPSAKSQI 161 Query: 201 RIXRIFNTYGPRMNIDDGRVVS----NFIAXAIRGEALTVQK-----PGTQTRSFCYVAD 353 R FN YGPR + GR+ S NF G+ + PG QTR F V D Sbjct: 162 AGFRYFNVYGPRES-HKGRMASVAFHNFNQFRAEGKVKLFGEYNGYGPGEQTRDFVSVED 220 Query: 354 MVN-GLMKLMNGDNTGPINIG 413 + L + +G N+G Sbjct: 221 VAKVNLHFFDHPQKSGIFNLG 241
>GM4D_YEREN (Q56872) Probable GDP-mannose 4,6-dehydratase (EC 4.2.1.47)| (GDP-D-mannose dehydratase) (ORF13.7) Length = 372 Score = 30.0 bits (66), Expect = 2.8 Identities = 23/70 (32%), Positives = 28/70 (40%) Frame = +3 Query: 27 RILLTSTSEVYGDPLEHPQTEAYWGNVNPIGVRSCYDEGKRVAETLMXXYHRQHGIEIRI 206 R STSE+YG E PQ E P RS Y K A + Y +G+ Sbjct: 126 RFYQASTSELYGLVQEIPQRE-----TTPFYPRSPYAVAKMYAYWITVNYRESYGMYACN 180 Query: 207 XRIFNTYGPR 236 +FN PR Sbjct: 181 GILFNHESPR 190
>GMD1_CAEEL (Q18801) Probable GDP-mannose 4,6 dehydratase 1 (EC 4.2.1.47)| (GDP-D-mannose dehydratase) (GMD) Length = 399 Score = 29.6 bits (65), Expect = 3.6 Identities = 30/140 (21%), Positives = 56/140 (40%), Gaps = 2/140 (1%) Frame = +3 Query: 27 RILLTSTSEVYGDPLEHPQTEAYWGNVNPIGVRSCYDEGKRVAETLMXXYHRQHGIEIRI 206 R STSE+YG E PQ+E P RS Y K ++ Y + + Sbjct: 177 RFYQASTSELYGKVQEIPQSEK-----TPFYPRSPYAVAKMYGYWIVVNYREAYNMFACN 231 Query: 207 XRIFNTYGPRM-NIDDGRVVSNFIAXAIRGEALTVQKPG-TQTRSFCYVADMVNGLMKLM 380 +FN PR R ++ +A G+ +++ + R + + + V + +++ Sbjct: 232 GILFNHESPRRGETFVTRKITRSVAKISLGQQESIELGNLSALRDWGHAREYVEAMWRIL 291 Query: 381 NGDNTGPINIGNPGEFTMLE 440 D+ I +F++ E Sbjct: 292 QHDSPDDFVIATGKQFSVRE 311
>CRSP6_HUMAN (Q9NVC6) CRSP complex subunit 6 (Cofactor required for Sp1| transcriptional activation subunit 6) (Transcriptional coactivator CRSP77) (Vitamin D3 receptor-interacting protein complex 80 kDa component) (DRIP80) (Thyroid hormone receptor-associ Length = 651 Score = 29.6 bits (65), Expect = 3.6 Identities = 32/144 (22%), Positives = 58/144 (40%), Gaps = 2/144 (1%) Frame = +3 Query: 9 AKRVGARILLTSTSEVYGDPLEHPQTEAYWGNVNPIGVRSCYDEGKRVAETLMXXYHRQH 188 AK + R +T + +E PQ +A+W N+N + Y+ +V T Sbjct: 435 AKHIFLRSRAAATIDSLASRIEDPQIQAHWSNINDV-----YESSVKVLITSQGYEQICK 489 Query: 189 GIEIRIXRIFNTYGPRMNIDDGRVVSNFIAXAIRGEALTVQKPGTQTRSFCYVADMVN-G 365 I++++ R+ DGRV++ + L Q Q + +A ++ Sbjct: 490 SIQLQLN--IGVEQIRVVHRDGRVITLSYQEQELQDFLLSQMSQHQVHAVQQLAKVMGWQ 547 Query: 366 LMKLMNGDNTGPI-NIGNPGEFTM 434 ++ N GPI +IGN T+ Sbjct: 548 VLSFSNHVGLGPIESIGNASAITV 571
>Y513_MYCBO (P0A5D2) Hypothetical protein Mb0513| Length = 376 Score = 29.3 bits (64), Expect = 4.7 Identities = 29/132 (21%), Positives = 47/132 (35%) Frame = +3 Query: 27 RILLTSTSEVYGDPLEHPQTEAYWGNVNPIGVRSCYDEGKRVAETLMXXYHRQHGIEIRI 206 R++L STSEVYG P + + + + + R+ I + I Sbjct: 136 RVVLKSTSEVYGSSPHDPVMFTEDSSSRRPFSQGFPKDSLDIEGYVRALGRRRPDIAVTI 195 Query: 207 XRIFNTYGPRMNIDDGRVVSNFIAXAIRGEALTVQKPGTQTRSFCYVADMVNGLMKLMNG 386 R+ N GP M+ R ++ + I G +Q + D + L + Sbjct: 196 LRLANMIGPAMDTTLSRYLAGPLVPTIFGRDARLQ--------LLHEQDALGALERAAMA 247 Query: 387 DNTGPINIGNPG 422 G NIG G Sbjct: 248 GKAGTFNIGADG 259
>Y501_MYCTU (P0A5D1) Hypothetical protein Rv0501/MT0522| Length = 376 Score = 29.3 bits (64), Expect = 4.7 Identities = 29/132 (21%), Positives = 47/132 (35%) Frame = +3 Query: 27 RILLTSTSEVYGDPLEHPQTEAYWGNVNPIGVRSCYDEGKRVAETLMXXYHRQHGIEIRI 206 R++L STSEVYG P + + + + + R+ I + I Sbjct: 136 RVVLKSTSEVYGSSPHDPVMFTEDSSSRRPFSQGFPKDSLDIEGYVRALGRRRPDIAVTI 195 Query: 207 XRIFNTYGPRMNIDDGRVVSNFIAXAIRGEALTVQKPGTQTRSFCYVADMVNGLMKLMNG 386 R+ N GP M+ R ++ + I G +Q + D + L + Sbjct: 196 LRLANMIGPAMDTTLSRYLAGPLVPTIFGRDARLQ--------LLHEQDALGALERAAMA 247 Query: 387 DNTGPINIGNPG 422 G NIG G Sbjct: 248 GKAGTFNIGADG 259
>GMDS_DROME (Q9VMW9) Probable GDP-mannose 4,6 dehydratase (EC 4.2.1.47)| (GDP-D-mannose dehydratase) (Dm-gmd) Length = 395 Score = 29.3 bits (64), Expect = 4.7 Identities = 24/78 (30%), Positives = 32/78 (41%) Frame = +3 Query: 3 GLAKRVGARILLTSTSEVYGDPLEHPQTEAYWGNVNPIGVRSCYDEGKRVAETLMXXYHR 182 G+ K V R STSE+YG +E PQ E P RS Y K ++ Y Sbjct: 166 GMEKNV--RFYQASTSELYGKVVETPQNEQ-----TPFYPRSPYACAKMYGFWIVINYRE 218 Query: 183 QHGIEIRIXRIFNTYGPR 236 + + +FN PR Sbjct: 219 AYNMYACNGILFNHESPR 236
>GAT20_ARATH (Q9SZI6) Putative GATA transcription factor 20| Length = 352 Score = 28.9 bits (63), Expect = 6.2 Identities = 15/29 (51%), Positives = 16/29 (55%) Frame = -3 Query: 321 FLASGQSGLHHVWXEQ*SY*QHGHHQCSS 235 F AS S LHH +Q QH HHQ SS Sbjct: 20 FFASLGSSLHHHLQQQQQQQQHFHHQASS 48
>HCYA_PANIN (P04254) Hemocyanin A chain| Length = 657 Score = 28.9 bits (63), Expect = 6.2 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Frame = +3 Query: 63 DPLEHPQTEAYWGNVNPIGVRSCYDEGKRVAETLMXXYHRQHGIEIR-IXRIFNT 224 +P ++P + N NP+G S Y++ ETLM + +E R +FNT Sbjct: 23 EPTKYPDLKEIAENFNPLGDTSIYNDHGAAVETLMKELNDHRLLEQRHWYSLFNT 77
>STRL_STRGR (P29781) dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133)| (dTDP-4-keto-L-rhamnose reductase) (dTDP-6-deoxy-L-mannose dehydrogenase) (dTDP-L-rhamnose synthetase) Length = 304 Score = 28.5 bits (62), Expect = 8.1 Identities = 27/96 (28%), Positives = 37/96 (38%) Frame = +3 Query: 12 KRVGARILLTSTSEVYGDPLEHPQTEAYWGNVNPIGVRSCYDEGKRVAETLMXXYHRQHG 191 + VGA +L ST V+ P E + P G R+ Y KR E + G Sbjct: 96 RAVGAVLLQLSTDYVFPGSGGRPYREDH-----PTGPRTVYGCTKRAGERAVLEVLPDTG 150 Query: 192 IEIRIXRIFNTYGPRMNIDDGRVVSNFIAXAIRGEA 299 +R ++ GP NF+A IR EA Sbjct: 151 YIVRTAWLYGAGGP-----------NFVAKMIRLEA 175 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 60,990,297 Number of Sequences: 219361 Number of extensions: 1120116 Number of successful extensions: 3015 Number of sequences better than 10.0: 75 Number of HSP's better than 10.0 without gapping: 2961 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3000 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2735358828 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)