ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags4f18 |
|---|---|
| Clone Library Name | barley_pub |
>ABCB7_RAT (Q704E8) ATP-binding cassette sub-family B member 7, mitochondrial| precursor (ATP-binding cassette transporter 7) (ABC transporter 7 protein) Length = 752 Score = 225 bits (574), Expect = 6e-59 Identities = 104/183 (56%), Positives = 147/183 (80%) Frame = +2 Query: 2 VSRTVFFHLHELDLRYHLSRQTGALNRIIDRGSRAINYILTVMVFNVVPTILEIGMVSSI 181 +++ VF HLH LDL +HLSRQTGAL++ IDRG+R I+++L+ +VFN++P + E+ +VSS+ Sbjct: 225 IAKNVFLHLHNLDLGFHLSRQTGALSKAIDRGTRGISFVLSALVFNLLPIVFEMTLVSSV 284 Query: 182 LAYQFGSTFAWITSVSVATYIAFTLAITQWRTKFRTAMNKADNASSTVAVDSLLNYETVK 361 L Y+ G+ FA +T ++ Y AFT+A+T+WRT+FR MNKADN + A+DSLLNYETVK Sbjct: 285 LYYKCGAQFALVTLGTLGAYTAFTVAVTRWRTRFRIEMNKADNDAGNAAIDSLLNYETVK 344 Query: 362 YFNNEQFEVKKYDKYLKSYEDAALKTQSSLAYLNFGQSVIFSSALSTAMVLSSYGVMSGA 541 YFNNE++E ++YD +LK+YE A+LK+ S+LA LNFGQS IFS L+ MVL+S G+++GA Sbjct: 345 YFNNEKYEAQRYDGFLKTYETASLKSTSTLAMLNFGQSAIFSVGLTAIMVLASQGIVAGA 404 Query: 542 LTV 550 LTV Sbjct: 405 LTV 407
>ABCB7_HUMAN (O75027) ATP-binding cassette sub-family B member 7, mitochondrial| precursor (ATP-binding cassette transporter 7) (ABC transporter 7 protein) Length = 752 Score = 224 bits (570), Expect = 2e-58 Identities = 103/183 (56%), Positives = 146/183 (79%) Frame = +2 Query: 2 VSRTVFFHLHELDLRYHLSRQTGALNRIIDRGSRAINYILTVMVFNVVPTILEIGMVSSI 181 +++ VF HLH LDL +HLSRQTGAL++ IDRG+R I+++L+ +VFN++P + E+ +VS + Sbjct: 225 IAKNVFLHLHNLDLGFHLSRQTGALSKAIDRGTRGISFVLSALVFNLLPIMFEVMLVSGV 284 Query: 182 LAYQFGSTFAWITSVSVATYIAFTLAITQWRTKFRTAMNKADNASSTVAVDSLLNYETVK 361 L Y+ G+ FA +T ++ TY AFT+A+T+WRT+FR MNKADN + A+DSLLNYETVK Sbjct: 285 LYYKCGAQFALVTLGTLGTYTAFTVAVTRWRTRFRIEMNKADNDAGNAAIDSLLNYETVK 344 Query: 362 YFNNEQFEVKKYDKYLKSYEDAALKTQSSLAYLNFGQSVIFSSALSTAMVLSSYGVMSGA 541 YFNNE++E ++YD +LK+YE A+LK+ S+LA LNFGQS IFS L+ MVL+S G+++G Sbjct: 345 YFNNERYEAQRYDGFLKTYETASLKSTSTLAMLNFGQSAIFSVGLTAIMVLASQGIVAGT 404 Query: 542 LTV 550 LTV Sbjct: 405 LTV 407
>ABCB7_MOUSE (Q61102) ATP-binding cassette sub-family B member 7, mitochondrial| (ATP-binding cassette transporter 7) (ABC transporter 7 protein) (Fragment) Length = 694 Score = 224 bits (570), Expect = 2e-58 Identities = 103/183 (56%), Positives = 147/183 (80%) Frame = +2 Query: 2 VSRTVFFHLHELDLRYHLSRQTGALNRIIDRGSRAINYILTVMVFNVVPTILEIGMVSSI 181 +++ VF HLH LDL +HLSRQTGAL++ IDRG+R I+++L+ +VFN++P + E+ +VSS+ Sbjct: 167 IAKNVFLHLHNLDLGFHLSRQTGALSKAIDRGTRGISFVLSALVFNLLPIVFEMMLVSSV 226 Query: 182 LAYQFGSTFAWITSVSVATYIAFTLAITQWRTKFRTAMNKADNASSTVAVDSLLNYETVK 361 L Y+ G+ FA +T ++ Y AFT+A+T+WRT+FR MNKADN + A+DSLLNYETVK Sbjct: 227 LYYKCGAQFALVTLGTLGAYTAFTVAVTRWRTRFRIEMNKADNDAGNAAIDSLLNYETVK 286 Query: 362 YFNNEQFEVKKYDKYLKSYEDAALKTQSSLAYLNFGQSVIFSSALSTAMVLSSYGVMSGA 541 YFNNE++E ++YD +LK+YE A+LK+ S+LA LNFGQ+ IFS L+ MVL+S G+++GA Sbjct: 287 YFNNEKYEAQRYDGFLKTYETASLKSTSTLAMLNFGQNAIFSVGLTAIMVLASQGIVAGA 346 Query: 542 LTV 550 LTV Sbjct: 347 LTV 349
>YD01_SCHPO (O14286) Putative ABC transporter C15A10.01 in chromosome I| Length = 693 Score = 187 bits (474), Expect = 2e-47 Identities = 88/183 (48%), Positives = 131/183 (71%) Frame = +2 Query: 2 VSRTVFFHLHELDLRYHLSRQTGALNRIIDRGSRAINYILTVMVFNVVPTILEIGMVSSI 181 VS V+ HL LD+ +HLS+QTG++ R +DRG++ I++IL+ MV +++P LEI MVS I Sbjct: 198 VSSNVYQHLLNLDMNFHLSKQTGSITRAMDRGTKGISFILSSMVLHIIPITLEIAMVSGI 257 Query: 182 LAYQFGSTFAWITSVSVATYIAFTLAITQWRTKFRTAMNKADNASSTVAVDSLLNYETVK 361 L Y++G +F+ I + +VA Y FT+ T WRT FR N AD+ +S A++SL+NYE VK Sbjct: 258 LTYKYGPSFSAIAATTVALYALFTVRTTSWRTVFRRQANAADSKASAAAIESLINYEAVK 317 Query: 362 YFNNEQFEVKKYDKYLKSYEDAALKTQSSLAYLNFGQSVIFSSALSTAMVLSSYGVMSGA 541 FNNE +E+ +Y+K+L +YE A +K SSLA+LN GQ++IFS+AL+ M + G+++ Sbjct: 318 TFNNESYEMSRYEKHLSAYEKANVKVASSLAFLNSGQAIIFSTALTLMMYMGCRGIVTSN 377 Query: 542 LTV 550 LTV Sbjct: 378 LTV 380
>ATM1_YEAST (P40416) Transporter ATM1, mitochondrial precursor| Length = 690 Score = 186 bits (473), Expect = 3e-47 Identities = 92/183 (50%), Positives = 128/183 (69%) Frame = +2 Query: 2 VSRTVFFHLHELDLRYHLSRQTGALNRIIDRGSRAINYILTVMVFNVVPTILEIGMVSSI 181 VS F HL +LDL +HLSRQTG L R +DRG++ I+ +LT MVF+++P EI +V I Sbjct: 190 VSLQTFQHLMKLDLGWHLSRQTGGLTRAMDRGTKGISQVLTAMVFHIIPISFEISVVCGI 249 Query: 182 LAYQFGSTFAWITSVSVATYIAFTLAITQWRTKFRTAMNKADNASSTVAVDSLLNYETVK 361 L YQFG++FA IT ++ Y FT+ T WRT FR NKADN +++VA+DSL+N+E VK Sbjct: 250 LTYQFGASFAAITFSTMLLYSIFTIKTTAWRTHFRRDANKADNKAASVALDSLINFEAVK 309 Query: 362 YFNNEQFEVKKYDKYLKSYEDAALKTQSSLAYLNFGQSVIFSSALSTAMVLSSYGVMSGA 541 YFNNE++ KY+ L +Y D+ +K SLA+LN GQ++IF++AL+ M + GV+ G Sbjct: 310 YFNNEKYLADKYNGSLMNYRDSQIKVSQSLAFLNSGQNLIFTTALTAMMYMGCTGVIGGN 369 Query: 542 LTV 550 LTV Sbjct: 370 LTV 372
>ABCB6_HUMAN (Q9NP58) ATP-binding cassette sub-family B member 6, mitochondrial| precursor (Mitochondrial ABC transporter 3) (Mt-ABC transporter 3) (ABC transporter umat) Length = 842 Score = 147 bits (371), Expect = 2e-35 Identities = 74/183 (40%), Positives = 114/183 (62%) Frame = +2 Query: 2 VSRTVFFHLHELDLRYHLSRQTGALNRIIDRGSRAINYILTVMVFNVVPTILEIGMVSSI 181 V +F HLHEL LR+HL R+TG + RI DRG+ ++ +L+ +VFNV+PT+ +I + Sbjct: 345 VELLIFSHLHELSLRWHLGRRTGEVLRIADRGTSSVTGLLSYLVFNVIPTLADIIIGIIY 404 Query: 182 LAYQFGSTFAWITSVSVATYIAFTLAITQWRTKFRTAMNKADNASSTVAVDSLLNYETVK 361 + F + F I + ++ Y+ T+ +T+WRTKFR AMN +NA+ AVDSLLN+ETVK Sbjct: 405 FSMFFNAWFGLIVFLCMSLYLTLTIVVTEWRTKFRRAMNTQENATRARAVDSLLNFETVK 464 Query: 362 YFNNEQFEVKKYDKYLKSYEDAALKTQSSLAYLNFGQSVIFSSALSTAMVLSSYGVMSGA 541 Y+N E +EV++Y + + Y+ K+ +SL LN Q+++ L +L +Y V Sbjct: 465 YYNAESYEVERYREAIIKYQGLEWKSSASLVLLNQTQNLVIGLGLLAGSLLCAYFVTEQK 524 Query: 542 LTV 550 L V Sbjct: 525 LQV 527
>HMT1_SCHPO (Q02592) Heavy metal tolerance protein precursor| Length = 830 Score = 91.7 bits (226), Expect = 1e-18 Identities = 56/183 (30%), Positives = 93/183 (50%) Frame = +2 Query: 2 VSRTVFFHLHELDLRYHLSRQTGALNRIIDRGSRAINYILTVMVFNVVPTILEIGMVSSI 181 +S H+ L +HL+++ G + + +GS ++N +VF + P +L++G+ Sbjct: 340 ISTKALRHVLNLSYDFHLNKRAGEVLTALTKGS-SLNTFAEQVVFQIGPVLLDLGVAMVY 398 Query: 182 LAYQFGSTFAWITSVSVATYIAFTLAITQWRTKFRTAMNKADNASSTVAVDSLLNYETVK 361 +F F I + Y T+ IT WRT+ R M + S V D+++N+ETVK Sbjct: 399 FFIKFDIYFTLIVLIMTLCYCYVTVKITSWRTEARRKMVNSWRESYAVQNDAIMNFETVK 458 Query: 362 YFNNEQFEVKKYDKYLKSYEDAALKTQSSLAYLNFGQSVIFSSALSTAMVLSSYGVMSGA 541 F+ + FE ++Y + Y K SL +LN Q IF+ +L+ A +LS+Y V G Sbjct: 459 NFDADDFENERYGHAVDIYLKQERKVLFSLNFLNIVQGGIFTFSLAIACLLSAYRVTFGF 518 Query: 542 LTV 550 TV Sbjct: 519 NTV 521
>ABC1_ENCCU (Q8SQI5) Probable ABC transporter ECU01_0200/ECU01_1410| Length = 596 Score = 64.3 bits (155), Expect = 2e-10 Identities = 40/155 (25%), Positives = 74/155 (47%), Gaps = 4/155 (2%) Frame = +2 Query: 35 LDLRYHLSR----QTGALNRIIDRGSRAINYILTVMVFNVVPTILEIGMVSSILAYQFGS 202 LDL H + + LNRI++RG+R I+ +L + P + + ++ + FG Sbjct: 111 LDLTMHAAHSCEIKPTELNRIVERGNRKISKVLVKTLTVATPALFRLALLFREVHAMFGP 170 Query: 203 TFAWITSVSVATYIAFTLAITQWRTKFRTAMNKADNASSTVAVDSLLNYETVKYFNNEQF 382 + + A Y A+T + + R ++R +N ADN+ S + + N + V+ +EQF Sbjct: 171 KYLVPILFTAAAYAAYTCVMLRIRARYRKEINNADNSVSRRIHECVSNVDLVRACCSEQF 230 Query: 383 EVKKYDKYLKSYEDAALKTQSSLAYLNFGQSVIFS 487 EV + +++ L + + N GQ +FS Sbjct: 231 EVSRLAGEMETMWALKLSDKGCVGMTNLGQRALFS 265
>MESD_LEUME (Q10418) Mesentericin Y105 transport/processing ATP-binding protein| mesD (EC 3.4.22.-) Length = 722 Score = 41.2 bits (95), Expect = 0.002 Identities = 38/179 (21%), Positives = 81/179 (45%), Gaps = 3/179 (1%) Frame = +2 Query: 23 HLHELDLRYHLSRQTGALNRIIDRGSRAINYILTVMVFNVVPTILEIGM---VSSILAYQ 193 H+ EL + + +R+TG I+ R + A N I+ + ++ L++G+ V ++L Q Sbjct: 253 HIFELPMSFFATRRTG---EIVSRFTDA-NAIIEALASTMLSVFLDLGILVIVGTVLVVQ 308 Query: 194 FGSTFAWITSVSVATYIAFTLAITQWRTKFRTAMNKADNASSTVAVDSLLNYETVKYFNN 373 ST I+ +++ Y + +K +A + S+ ++ + ET+K N+ Sbjct: 309 -NSTLFLISLIAIPAYALVVWLFMRPFSKMNNDQMQAGSMLSSSIIEDINGVETIKALNS 367 Query: 374 EQFEVKKYDKYLKSYEDAALKTQSSLAYLNFGQSVIFSSALSTAMVLSSYGVMSGALTV 550 E K D +Y + + + A N +S++ S + + + VM+ ++V Sbjct: 368 EATAYHKIDHEFVTYLEKSFVYAKTEAVQNAIKSLLQLSLNVVILWVGAQLVMTNKISV 426
>MDR65_DROME (Q00748) Multidrug resistance protein homolog 65 (EC 3.6.3.44)| (P-glycoprotein 65) Length = 1302 Score = 36.6 bits (83), Expect = 0.049 Identities = 19/85 (22%), Positives = 42/85 (49%), Gaps = 4/85 (4%) Frame = +2 Query: 167 MVSSILAYQFGSTFAWITSVSVATYIAFTLAITQWRTKFRTAMNKADNAS----STVAVD 334 +V I+ ++ W +++V++YI + + + KF+ + + S +A + Sbjct: 203 VVGFIITVAISFSYGWKLTLAVSSYIPLVILLNYYVAKFQGKLTAREQESYAGAGNLAEE 262 Query: 335 SLLNYETVKYFNNEQFEVKKYDKYL 409 L + TV F E+ EV++Y+ +L Sbjct: 263 ILSSIRTVVSFGGEKSEVQRYENFL 287
>FTSA_STAEQ (Q5HQ07) Cell division protein ftsA| Length = 464 Score = 33.5 bits (75), Expect = 0.41 Identities = 16/42 (38%), Positives = 29/42 (69%) Frame = +2 Query: 314 SSTVAVDSLLNYETVKYFNNEQFEVKKYDKYLKSYEDAALKT 439 SS++A D LL+Y T+ Y +NE+FE ++ ++S +D+ K+ Sbjct: 367 SSSIAFDELLDYVTISYQDNEEFE----EEVIESDKDSETKS 404
>YWJA_BACSU (P45861) Hypothetical ABC transporter ATP-binding protein ywjA| Length = 575 Score = 33.1 bits (74), Expect = 0.54 Identities = 33/136 (24%), Positives = 61/136 (44%), Gaps = 6/136 (4%) Frame = +2 Query: 8 RTVFFHLHELDLRYHLSRQTGALNRIIDRGSRAINYILTVM------VFNVVPTILEIGM 169 +++F HL +L +++ + +TG L + + + + YI V +F V TIL Sbjct: 91 KSLFDHLQKLSFKFYDNNKTGTL---MSKLTNDLMYIGEVAHHGPEDLFIAVMTILGAFG 147 Query: 170 VSSILAYQFGSTFAWITSVSVATYIAFTLAITQWRTKFRTAMNKADNASSTVAVDSLLNY 349 V + +Q A +T + + I L + TK T +NK S +++ Sbjct: 148 VMLFINWQL----ALLTFIIMPIVIWLALYFNKKMTKAFTTLNKDIGDFSARVENNIGGI 203 Query: 350 ETVKYFNNEQFEVKKY 397 V+ F NE FE +++ Sbjct: 204 RLVQAFGNEAFEKERF 219
>PMPB_CHLMU (Q9PJY2) Probable outer membrane protein pmpB precursor (Polymorphic| membrane protein B) Length = 1672 Score = 33.1 bits (74), Expect = 0.54 Identities = 31/121 (25%), Positives = 51/121 (42%), Gaps = 13/121 (10%) Frame = +2 Query: 227 SVATYIAFTLAITQWRT-----KFRTAMNK---ADNASSTVAVDSLLN---YETVKYFNN 373 S++ Y+ TL Q +T RT+ K A N+ T+ ++ N Y F++ Sbjct: 1068 SISGYVKLTLQAAQGKTISFFDSIRTSTKKTGQAQNSYETLDINKTENSNTYAGTVLFSS 1127 Query: 374 EQFEVKKY--DKYLKSYEDAALKTQSSLAYLNFGQSVIFSSALSTAMVLSSYGVMSGALT 547 E EVK Y + LK + L ++F Q + VLS+ + +GAL Sbjct: 1128 ELHEVKSYVPQNVVLHNGTLVLKKNAELHVVSFEQKEGSKLIMEPGAVLSNQNIANGALA 1187 Query: 548 V 550 + Sbjct: 1188 I 1188
>PEDD_PEDAC (P36497) Pediocin PA-1 transport/processing ATP-binding protein| pedD (EC 3.4.22.-) (Pediocin AcH transport ATP-binding protein papD) Length = 724 Score = 33.1 bits (74), Expect = 0.54 Identities = 29/128 (22%), Positives = 56/128 (43%), Gaps = 2/128 (1%) Frame = +2 Query: 23 HLHELDLRYHLSRQTGALNRIIDRGSRAINYI--LTVMVFNVVPTILEIGMVSSILAYQF 196 HL +L + + +R G + S+ I+ + T+ +F + +L +G+ LAYQ Sbjct: 250 HLFDLPMNFFTTRHVGEMTSRFSDASKIIDALGSTTLTLFLDMWILLAVGL---FLAYQN 306 Query: 197 GSTFAWITSVSVATYIAFTLAITQWRTKFRTAMNKADNASSTVAVDSLLNYETVKYFNNE 376 + F + V V YI+ + + +++ ++ ++SL ET+K E Sbjct: 307 INLFL-CSLVVVPIYISIVWLFKKTFNRLNQDTMESNAVLNSAIIESLSGIETIKSLTGE 365 Query: 377 QFEVKKYD 400 KK D Sbjct: 366 ATTKKKID 373
>MID1_YEAST (P41821) Protein MID1| Length = 548 Score = 33.1 bits (74), Expect = 0.54 Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 3/96 (3%) Frame = +2 Query: 242 IAFTLAITQWRTKFRTAMNKADNASSTVAVDSLLNYETVKYFNNEQFEVKKYDKYLKSYE 421 + F + W T MN A ++ V D+ + Y N ++ YD Y+ SYE Sbjct: 202 LVFQWDVRPWVEVLDTDMNSALLSTGNVTADAKV------YHNYSIYDPSLYDLYVYSYE 255 Query: 422 DAALKTQS---SLAYLNFGQSVIFSSALSTAMVLSS 520 D+ Q+ SL + G ++ S S A V S+ Sbjct: 256 DSVQLNQNYNLSLCAVKNGPYLVSSQNTSNATVTSN 291
>FTSA_STAES (Q8CPK5) Cell division protein ftsA| Length = 464 Score = 32.3 bits (72), Expect = 0.92 Identities = 13/24 (54%), Positives = 19/24 (79%) Frame = +2 Query: 314 SSTVAVDSLLNYETVKYFNNEQFE 385 SS++A D LL+Y T+ Y +NE+FE Sbjct: 367 SSSIAFDELLDYVTISYQDNEEFE 390
>RPM1_CAEEL (Q17551) Ubiquitin ligase protein rpm-1 (EC 6.3.2.-)| (Pam/highwire/rpm-1 protein) (Regulator of presynaptic morphology protein 1) (Synapse defective protein 3) Length = 3766 Score = 31.6 bits (70), Expect = 1.6 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Frame = +2 Query: 347 YETVKYFNNEQFEVKKYDKYLKSYEDA--ALKTQSSLAYLNFGQSVIFSSALSTAMVL 514 Y+ + Y+N+ + E+K YD + KS + A + + LA F V S A +T+M L Sbjct: 956 YDMLWYYNSAEMEIKGYDIFKKSEKSVGDAFDSLTFLAGAEFAVQVYDSPAYATSMSL 1013
>EDG5_HUMAN (O95136) Sphingosine 1-phosphate receptor Edg-5 (S1P receptor| Edg-5) (Endothelial differentiation G-protein coupled receptor 5) (Sphingosine 1-phosphate receptor 2) (S1P2) Length = 353 Score = 31.2 bits (69), Expect = 2.0 Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 6/122 (4%) Frame = -1 Query: 507 IAVDNAELNITLC--PKFR*ARLLWVFSAASS*LFKYLSYF---LTSNCSLLKYLTVS*F 343 I V+N + I + KF A L++ + A+S L +++ L S L+ V F Sbjct: 47 IVVENLLVLIAVARNSKFHSAMYLFLGNLAASDLLAGVAFVANTLLSGSVTLRLTPVQWF 106 Query: 342 RRESTATVLEALSALFMAVLNLVRHCVIAKVKAIYVATETEVIQAKVEPNW*AS-ILDTI 166 RE +A + + S + + + RH IAKVK +Y + ++ + + +W S +L + Sbjct: 107 AREGSAFITLSASVFSLLAIAIERHVAIAKVK-LYGSDKSCRMLLLIGASWLISLVLGGL 165 Query: 165 PI 160 PI Sbjct: 166 PI 167
>MSBA_BORPE (Q7VWD8) Lipid A export ATP-binding/permease protein msbA| Length = 623 Score = 31.2 bits (69), Expect = 2.0 Identities = 33/159 (20%), Positives = 61/159 (38%) Frame = +2 Query: 74 LNRIIDRGSRAINYILTVMVFNVVPTILEIGMVSSILAYQFGSTFAWITSVSVATYIAFT 253 LNR Y V+ V T++ I ++ +L + T + + V+ IA Sbjct: 164 LNRFTIDAGNVTGYATDVITVLVRETLVVIALIGVLLYMSWALTLIILVMLPVSVGIARA 223 Query: 254 LAITQWRTKFRTAMNKADNASSTVAVDSLLNYETVKYFNNEQFEVKKYDKYLKSYEDAAL 433 R T A+ + V + + +K F+ E +++D A+ Sbjct: 224 FTRRLRRINRETVNMNAE--LTRVVSEGIDGQRVIKLFDGYDAERRRFDFVNSRLRRFAM 281 Query: 434 KTQSSLAYLNFGQSVIFSSALSTAMVLSSYGVMSGALTV 550 ++ ++ A L V S A+ + ++ SGALTV Sbjct: 282 RSATADAALTPLTQVCISVAVGAVIAVALSQANSGALTV 320
>MSBA_BORPA (Q7W9N7) Lipid A export ATP-binding/permease protein msbA| Length = 623 Score = 31.2 bits (69), Expect = 2.0 Identities = 33/159 (20%), Positives = 61/159 (38%) Frame = +2 Query: 74 LNRIIDRGSRAINYILTVMVFNVVPTILEIGMVSSILAYQFGSTFAWITSVSVATYIAFT 253 LNR Y V+ V T++ I ++ +L + T + + V+ IA Sbjct: 164 LNRFTIDAGNVTGYATDVITVLVRETLVVIALIGVLLYMSWALTLIILVMLPVSVGIARA 223 Query: 254 LAITQWRTKFRTAMNKADNASSTVAVDSLLNYETVKYFNNEQFEVKKYDKYLKSYEDAAL 433 R T A+ + V + + +K F+ E +++D A+ Sbjct: 224 FTRRLRRINRETVNMNAE--LTRVVSEGIDGQRVIKLFDGYDAERRRFDFVNSRLRRFAM 281 Query: 434 KTQSSLAYLNFGQSVIFSSALSTAMVLSSYGVMSGALTV 550 ++ ++ A L V S A+ + ++ SGALTV Sbjct: 282 RSATADAALTPLTQVCISVAVGAVIAVALSQANSGALTV 320
>MSBA_BORBR (Q7WH20) Lipid A export ATP-binding/permease protein msbA| Length = 623 Score = 31.2 bits (69), Expect = 2.0 Identities = 33/159 (20%), Positives = 61/159 (38%) Frame = +2 Query: 74 LNRIIDRGSRAINYILTVMVFNVVPTILEIGMVSSILAYQFGSTFAWITSVSVATYIAFT 253 LNR Y V+ V T++ I ++ +L + T + + V+ IA Sbjct: 164 LNRFTIDAGNVTGYATDVITVLVRETLVVIALIGVLLYMSWALTLIILVMLPVSVGIARA 223 Query: 254 LAITQWRTKFRTAMNKADNASSTVAVDSLLNYETVKYFNNEQFEVKKYDKYLKSYEDAAL 433 R T A+ + V + + +K F+ E +++D A+ Sbjct: 224 FTRRLRRINRETVNMNAE--LTRVVSEGIDGQRVIKLFDGYDAERRRFDFVNSRLRRFAM 281 Query: 434 KTQSSLAYLNFGQSVIFSSALSTAMVLSSYGVMSGALTV 550 ++ ++ A L V S A+ + ++ SGALTV Sbjct: 282 RSATADAALTPLTQVCISVAVGAVIAVALSQANSGALTV 320
>BRCA2_HUMAN (P51587) Breast cancer type 2 susceptibility protein (Fanconi| anemia group D1 protein) Length = 3418 Score = 30.0 bits (66), Expect = 4.5 Identities = 24/103 (23%), Positives = 46/103 (44%), Gaps = 1/103 (0%) Frame = +2 Query: 170 VSSILAYQFGSTFAWITSVSVATYIAFTLAITQWRTKFRTAMNKADNASSTVAV-DSLLN 346 +S L + +W +S++ ++ T+ I + + AS TV D+ N Sbjct: 180 ISESLGAEVDPDMSWSSSLATPPTLSSTVLIV-----------RNEEASETVFPHDTTAN 228 Query: 347 YETVKYFNNEQFEVKKYDKYLKSYEDAALKTQSSLAYLNFGQS 475 ++ YF+N +KK D+++ S D+ Q A FG++ Sbjct: 229 VKS--YFSNHDESLKKNDRFIASVTDSENTNQREAASHGFGKT 269
>STRH_STRPN (P49610) Beta-N-acetylhexosaminidase precursor (EC 3.2.1.52)| Length = 1312 Score = 30.0 bits (66), Expect = 4.5 Identities = 40/161 (24%), Positives = 68/161 (42%), Gaps = 13/161 (8%) Frame = +2 Query: 56 SRQTGALNRIIDRGSRAINYILTVMVFNVVPTIL----EIGMVSSILAYQFGSTFAWITS 223 S+ T +N D+G I I TV + IL E+G+ + +Y FG A Sbjct: 272 SQMTDLINYAKDKG---IGLIPTVNSPGHMDAILNAMKELGIQNPNFSY-FGKKSARTVD 327 Query: 224 VSVATYIAFTLAITQWRTK--------FRTAMNKADNASSTVAVDSLLNYETVKYFNNEQ 379 + +AFT A+ F +++ N ++ S+L + KY+ NE Sbjct: 328 LDNEQAVAFTKALIDKYAAYFAKKTEIFNIGLDEYANDATDAKGWSVLQAD--KYYPNEG 385 Query: 380 FEVKKYDKYLKSYEDAALKTQS-SLAYLNFGQSVIFSSALS 499 + VK Y+K++ D A +S L + F + ++S S Sbjct: 386 YPVKGYEKFIAYANDLARIVKSHGLKPMAFNDGIYYNSDTS 426
>FTSA_STAAU (O07325) Cell division protein ftsA| Length = 471 Score = 30.0 bits (66), Expect = 4.5 Identities = 12/24 (50%), Positives = 18/24 (75%) Frame = +2 Query: 314 SSTVAVDSLLNYETVKYFNNEQFE 385 SS++A D LL+Y T+ Y +NE+ E Sbjct: 368 SSSIAFDELLDYVTINYHDNEETE 391
>FTSA_STAAN (P63765) Cell division protein ftsA| Length = 470 Score = 30.0 bits (66), Expect = 4.5 Identities = 12/24 (50%), Positives = 18/24 (75%) Frame = +2 Query: 314 SSTVAVDSLLNYETVKYFNNEQFE 385 SS++A D LL+Y T+ Y +NE+ E Sbjct: 367 SSSIAFDELLDYVTINYHDNEETE 390
>FTSA_STAAM (P63764) Cell division protein ftsA| Length = 470 Score = 30.0 bits (66), Expect = 4.5 Identities = 12/24 (50%), Positives = 18/24 (75%) Frame = +2 Query: 314 SSTVAVDSLLNYETVKYFNNEQFE 385 SS++A D LL+Y T+ Y +NE+ E Sbjct: 367 SSSIAFDELLDYVTINYHDNEETE 390
>FTSA_STAAC (Q5HGP6) Cell division protein ftsA| Length = 470 Score = 30.0 bits (66), Expect = 4.5 Identities = 12/24 (50%), Positives = 18/24 (75%) Frame = +2 Query: 314 SSTVAVDSLLNYETVKYFNNEQFE 385 SS++A D LL+Y T+ Y +NE+ E Sbjct: 367 SSSIAFDELLDYVTINYHDNEETE 390
>FTSA_STAAR (Q6GHQ0) Cell division protein ftsA| Length = 468 Score = 30.0 bits (66), Expect = 4.5 Identities = 12/24 (50%), Positives = 18/24 (75%) Frame = +2 Query: 314 SSTVAVDSLLNYETVKYFNNEQFE 385 SS++A D LL+Y T+ Y +NE+ E Sbjct: 367 SSSIAFDELLDYVTINYHDNEETE 390
>HEPA_ANASP (P22638) Heterocyst differentiation ATP-binding protein hepA| Length = 607 Score = 30.0 bits (66), Expect = 4.5 Identities = 28/147 (19%), Positives = 67/147 (45%), Gaps = 4/147 (2%) Frame = +2 Query: 8 RTVFFHLHELDLRYHLSRQTGALNRIIDRGSRAINYILTVMVFNVVPTILEIGMVSSILA 187 + +F L L L Y ++G L I I + + F V+ I+ + + ++ Sbjct: 126 KQIFEQLQALRLSYFAQTRSGELINTITTEIERIKQGFSGLAF-VLTRIMTVCVYFVVMF 184 Query: 188 YQFGSTFAW-ITSVSVATYIAFTLAITQWRTKFRTA---MNKADNASSTVAVDSLLNYET 355 + +W ++ +SV ++ + ++ + R ++ A+ + VAV+ + T Sbjct: 185 -----SISWQLSIISVLIFLLLAVGLSTLNKRVRETSFGISHANAQFTAVAVEFINGIRT 239 Query: 356 VKYFNNEQFEVKKYDKYLKSYEDAALK 436 ++ F ++FE +++ K + +AA+K Sbjct: 240 IQAFGTQEFERQRFYKASTNQLNAAIK 266
>HIP1_YEAST (P06775) Histidine permease| Length = 603 Score = 29.3 bits (64), Expect = 7.8 Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 1/83 (1%) Frame = +2 Query: 50 HLSRQTGALNRIIDRGSRAINYILTVMVFNVVPTILEIGMVSSILAY-QFGSTFAWITSV 226 H+ LNR+ RG R +N IL + F G++S + A + F W++++ Sbjct: 406 HIGNLPKFLNRVDKRG-RPMNAILLTLFF---------GLLSFVAASDKQAEVFTWLSAL 455 Query: 227 SVATYIAFTLAITQWRTKFRTAM 295 S + I +AI +FR AM Sbjct: 456 SGLSTIFCWMAINLSHIRFRQAM 478 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 68,318,885 Number of Sequences: 219361 Number of extensions: 1189885 Number of successful extensions: 4055 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 3981 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4052 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4488201198 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
