| Clone Name | bags4f18 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK072699.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023139I17, full insert sequence Length = 2728 Score = 700 bits (353), Expect = 0.0 Identities = 502/552 (90%) Strand = Plus / Plus Query: 1 agtctccaggacggtattttttcacctgcatgagcttgatcttcgttatcatctaagccg 60 ||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 970 agtctccagtacggtattttcgcacttgcatgagcttgatcttcgttatcatctaagccg 1029 Query: 61 tcaaactggagctctaaatcgcataattgaccgaggcagtcgcgcaataaattacattct 120 |||||||| || ||||||||||||||||| ||||| ||||| || ||||||||||| || Sbjct: 1030 gcaaactggtgccctaaatcgcataattgatcgaggtagtcgtgcgataaattacatcct 1089 Query: 121 tacagtgatggtgttcaatgttgttcccacaatactagagattggtatggtgtcaagtat 180 |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 1090 tacagtgatggtgttcaatgttgttcccacaatattggagattggtatggtgtcaagtat 1149 Query: 181 acttgcctaccagtttggttccacttttgcttggattacttcagtttcagttgctacata 240 |||||| ||| | ||||||||||| ||||||||||||||||||||||| |||||||| || Sbjct: 1150 acttgcatacaaatttggttccacctttgcttggattacttcagtttctgttgctactta 1209 Query: 241 tattgctttcactttggctatcacacagtggcggactaagttcaggacagccatgaataa 300 |||||||||||| |||||| | || ||||||||||| || |||||||||||||||||||| Sbjct: 1210 tattgctttcaccttggctgtgacgcagtggcggaccaaattcaggacagccatgaataa 1269 Query: 301 agctgataatgcttctagtacagtggcagttgactcccttctgaattatgagactgtcaa 360 ||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||| Sbjct: 1270 agctgataacgcttctagcacagtggcagttgactcccttctgaactatgagactgtcaa 1329 Query: 361 atacttcaacaatgagcaatttgaagttaagaagtatgataaatacttaaagagctacga 420 |||||||||||||| |||||||||||| |||||||||| ||||| ||||||| || || Sbjct: 1330 gtacttcaacaatgaacaatttgaagttgagaagtatgacaaatatttaaagaagtatga 1389 Query: 421 ggatgctgcactgaaaacccaaagtagcctcgcctacctgaattttgggcaaagtgttat 480 |||||||||||||||||||||||||||||| ||||||||||| ||||| |||| | | || Sbjct: 1390 ggatgctgcactgaaaacccaaagtagccttgcctacctgaactttggacaaaatatcat 1449 Query: 481 attcagctcggcattatccacagcaatggttttgagctcatatggngtaatgagtggtgc 540 ||| |||||||| |||||||| || ||||||||||| ||||| || |||||||||||||| Sbjct: 1450 atttagctcggctttatccacggctatggttttgagttcatacggtgtaatgagtggtgc 1509 Query: 541 tctgactgtcgg 552 |||||||||||| Sbjct: 1510 tctgactgtcgg 1521
>dbj|AK064342.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-H07, full insert sequence Length = 2522 Score = 700 bits (353), Expect = 0.0 Identities = 502/552 (90%) Strand = Plus / Plus Query: 1 agtctccaggacggtattttttcacctgcatgagcttgatcttcgttatcatctaagccg 60 ||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 765 agtctccagtacggtattttcgcacttgcatgagcttgatcttcgttatcatctaagccg 824 Query: 61 tcaaactggagctctaaatcgcataattgaccgaggcagtcgcgcaataaattacattct 120 |||||||| || ||||||||||||||||| ||||| ||||| || ||||||||||| || Sbjct: 825 gcaaactggtgccctaaatcgcataattgatcgaggtagtcgtgcgataaattacatcct 884 Query: 121 tacagtgatggtgttcaatgttgttcccacaatactagagattggtatggtgtcaagtat 180 |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 885 tacagtgatggtgttcaatgttgttcccacaatattggagattggtatggtgtcaagtat 944 Query: 181 acttgcctaccagtttggttccacttttgcttggattacttcagtttcagttgctacata 240 |||||| ||| | ||||||||||| ||||||||||||||||||||||| |||||||| || Sbjct: 945 acttgcatacaaatttggttccacctttgcttggattacttcagtttctgttgctactta 1004 Query: 241 tattgctttcactttggctatcacacagtggcggactaagttcaggacagccatgaataa 300 |||||||||||| |||||| | || ||||||||||| || |||||||||||||||||||| Sbjct: 1005 tattgctttcaccttggctgtgacgcagtggcggaccaaattcaggacagccatgaataa 1064 Query: 301 agctgataatgcttctagtacagtggcagttgactcccttctgaattatgagactgtcaa 360 ||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||| Sbjct: 1065 agctgataacgcttctagcacagtggcagttgactcccttctgaactatgagactgtcaa 1124 Query: 361 atacttcaacaatgagcaatttgaagttaagaagtatgataaatacttaaagagctacga 420 |||||||||||||| |||||||||||| |||||||||| ||||| ||||||| || || Sbjct: 1125 gtacttcaacaatgaacaatttgaagttgagaagtatgacaaatatttaaagaagtatga 1184 Query: 421 ggatgctgcactgaaaacccaaagtagcctcgcctacctgaattttgggcaaagtgttat 480 |||||||||||||||||||||||||||||| ||||||||||| ||||| |||| | | || Sbjct: 1185 ggatgctgcactgaaaacccaaagtagccttgcctacctgaactttggacaaaatatcat 1244 Query: 481 attcagctcggcattatccacagcaatggttttgagctcatatggngtaatgagtggtgc 540 ||| |||||||| |||||||| || ||||||||||| ||||| || |||||||||||||| Sbjct: 1245 atttagctcggctttatccacggctatggttttgagttcatacggtgtaatgagtggtgc 1304 Query: 541 tctgactgtcgg 552 |||||||||||| Sbjct: 1305 tctgactgtcgg 1316
>ref|NM_185480.1| Oryza sativa (japonica cultivar-group), Ozsa8577 predicted mRNA Length = 2811 Score = 684 bits (345), Expect = 0.0 Identities = 491/540 (90%) Strand = Plus / Plus Query: 13 ggtattttttcacctgcatgagcttgatcttcgttatcatctaagccgtcaaactggagc 72 |||||||| ||| |||||||||||||||||||||||||||||||||| |||||||| || Sbjct: 1329 ggtattttcgcacttgcatgagcttgatcttcgttatcatctaagccggcaaactggtgc 1388 Query: 73 tctaaatcgcataattgaccgaggcagtcgcgcaataaattacattcttacagtgatggt 132 ||||||||||||||||| ||||| ||||| || ||||||||||| |||||||||||||| Sbjct: 1389 cctaaatcgcataattgatcgaggtagtcgtgcgataaattacatccttacagtgatggt 1448 Query: 133 gttcaatgttgttcccacaatactagagattggtatggtgtcaagtatacttgcctacca 192 |||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||| | Sbjct: 1449 gttcaatgttgttcccacaatattggagattggtatggtgtcaagtatacttgcatacaa 1508 Query: 193 gtttggttccacttttgcttggattacttcagtttcagttgctacatatattgctttcac 252 ||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 1509 atttggttccacctttgcttggattacttcagtttctgttgctacttatattgctttcac 1568 Query: 253 tttggctatcacacagtggcggactaagttcaggacagccatgaataaagctgataatgc 312 |||||| | || ||||||||||| || ||||||||||||||||||||||||||||| || Sbjct: 1569 cttggctgtgacgcagtggcggaccaaattcaggacagccatgaataaagctgataacgc 1628 Query: 313 ttctagtacagtggcagttgactcccttctgaattatgagactgtcaaatacttcaacaa 372 |||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 1629 ttctagcacagtggcagttgactcccttctgaactatgagactgtcaagtacttcaacaa 1688 Query: 373 tgagcaatttgaagttaagaagtatgataaatacttaaagagctacgaggatgctgcact 432 ||| |||||||||||| |||||||||| ||||| ||||||| || |||||||||||||| Sbjct: 1689 tgaacaatttgaagttgagaagtatgacaaatatttaaagaagtatgaggatgctgcact 1748 Query: 433 gaaaacccaaagtagcctcgcctacctgaattttgggcaaagtgttatattcagctcggc 492 |||||||||||||||||| ||||||||||| ||||| |||| | | ||||| |||||||| Sbjct: 1749 gaaaacccaaagtagccttgcctacctgaactttggacaaaatatcatatttagctcggc 1808 Query: 493 attatccacagcaatggttttgagctcatatggngtaatgagtggtgctctgactgtcgg 552 |||||||| || ||||||||||| ||||| || |||||||||||||||||||||||||| Sbjct: 1809 tttatccacggctatggttttgagttcatacggtgtaatgagtggtgctctgactgtcgg 1868
>gb|DQ267106.1| Triticum urartu clone BAC 210J24 chromosome 4A, complete sequence Length = 111912 Score = 234 bits (118), Expect = 2e-58 Identities = 132/137 (96%) Strand = Plus / Plus Query: 416 tacgaggatgctgcactgaaaacccaaagtagcctcgcctacctgaattttgggcaaagt 475 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 62552 tacgaggatgctgcactgaaaactcaaagtagcctcgcctacctgaattttgggcaaagt 62611 Query: 476 gttatattcagctcggcattatccacagcaatggttttgagctcatatggngtaatgagt 535 ||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||| Sbjct: 62612 gttatattcagctcggcattatcaacggcaatggttttgagctcatatggtataatgagt 62671 Query: 536 ggtgctctgactgtcgg 552 ||||||||||||||||| Sbjct: 62672 ggtgctctgactgtcgg 62688 Score = 202 bits (102), Expect = 9e-49 Identities = 108/110 (98%) Strand = Plus / Plus Query: 159 agattggtatggtgtcaagtatacttgcctaccagtttggttccacttttgcttggatta 218 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61931 agattggtatggtgtcaagtatacttgcctaccagtttggttccacttttgcttggatta 61990 Query: 219 cttcagtttcagttgctacatatattgctttcactttggctatcacacag 268 ||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 61991 cttcagtttcagttgctacctacattgctttcactttggctatcacacag 62040 Score = 192 bits (97), Expect = 8e-46 Identities = 103/105 (98%) Strand = Plus / Plus Query: 56 agccgtcaaactggagctctaaatcgcataattgaccgaggcagtcgcgcaataaattac 115 ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 61666 agccgtcaaactggagctctaaatcgcataattgaccgaggcagtcgtgccataaattac 61725 Query: 116 attcttacagtgatggtgttcaatgttgttcccacaatactagag 160 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61726 attcttacagtgatggtgttcaatgttgttcccacaatactagag 61770 Score = 155 bits (78), Expect = 2e-34 Identities = 84/86 (97%) Strand = Plus / Plus Query: 267 agtggcggactaagttcaggacagccatgaataaagctgataatgcttctagtacagtgg 326 ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 62176 agtggcggactcagttcaggacagccatgaacaaagctgataatgcttctagtacagtgg 62235 Query: 327 cagttgactcccttctgaattatgag 352 |||||||||||||||||||||||||| Sbjct: 62236 cagttgactcccttctgaattatgag 62261 Score = 119 bits (60), Expect = 1e-23 Identities = 63/64 (98%) Strand = Plus / Plus Query: 351 agactgtcaaatacttcaacaatgagcaatttgaagttaagaagtatgataaatacttaa 410 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 62360 agactgtcaaatacttcaacaatgagcaatttgaagttcagaagtatgataaatacttaa 62419 Query: 411 agag 414 |||| Sbjct: 62420 agag 62423 Score = 89.7 bits (45), Expect = 9e-15 Identities = 45/45 (100%) Strand = Plus / Plus Query: 13 ggtattttttcacctgcatgagcttgatcttcgttatcatctaag 57 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61173 ggtattttttcacctgcatgagcttgatcttcgttatcatctaag 61217
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 165 bits (83), Expect = 2e-37 Identities = 121/134 (90%) Strand = Plus / Minus Query: 419 gaggatgctgcactgaaaacccaaagtagcctcgcctacctgaattttgggcaaagtgtt 478 |||||||||||||||||||||||||||||||| ||||||||||| ||||| |||| | | Sbjct: 1496249 gaggatgctgcactgaaaacccaaagtagccttgcctacctgaactttggacaaaatatc 1496190 Query: 479 atattcagctcggcattatccacagcaatggttttgagctcatatggngtaatgagtggt 538 ||||| |||||||| |||||||| || ||||||||||| ||||| || |||||||||||| Sbjct: 1496189 atatttagctcggctttatccacggctatggttttgagttcatacggtgtaatgagtggt 1496130 Query: 539 gctctgactgtcgg 552 |||||||||||||| Sbjct: 1496129 gctctgactgtcgg 1496116 Score = 145 bits (73), Expect = 2e-31 Identities = 94/101 (93%) Strand = Plus / Minus Query: 159 agattggtatggtgtcaagtatacttgcctaccagtttggttccacttttgcttggatta 218 |||||||||||||||||||||||||||| ||| | ||||||||||| ||||||||||||| Sbjct: 1497137 agattggtatggtgtcaagtatacttgcatacaaatttggttccacctttgcttggatta 1497078 Query: 219 cttcagtttcagttgctacatatattgctttcactttggct 259 |||||||||| |||||||| |||||||||||||| |||||| Sbjct: 1497077 cttcagtttctgttgctacttatattgctttcaccttggct 1497037 Score = 135 bits (68), Expect = 2e-28 Identities = 83/88 (94%) Strand = Plus / Minus Query: 265 acagtggcggactaagttcaggacagccatgaataaagctgataatgcttctagtacagt 324 |||||||||||| || ||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 1496918 acagtggcggaccaaattcaggacagccatgaataaagctgataacgcttctagcacagt 1496859 Query: 325 ggcagttgactcccttctgaattatgag 352 ||||||||||||||||||||| |||||| Sbjct: 1496858 ggcagttgactcccttctgaactatgag 1496831 Score = 133 bits (67), Expect = 7e-28 Identities = 91/99 (91%) Strand = Plus / Minus Query: 56 agccgtcaaactggagctctaaatcgcataattgaccgaggcagtcgcgcaataaattac 115 ||||| |||||||| || ||||||||||||||||| ||||| ||||| || ||||||||| Sbjct: 1497390 agccggcaaactggtgccctaaatcgcataattgatcgaggtagtcgtgcgataaattac 1497331 Query: 116 attcttacagtgatggtgttcaatgttgttcccacaata 154 || |||||||||||||||||||||||||||||||||||| Sbjct: 1497330 atccttacagtgatggtgttcaatgttgttcccacaata 1497292 Score = 87.7 bits (44), Expect = 4e-14 Identities = 59/64 (92%) Strand = Plus / Minus Query: 351 agactgtcaaatacttcaacaatgagcaatttgaagttaagaagtatgataaatacttaa 410 |||||||||| |||||||||||||| |||||||||||| |||||||||| ||||| |||| Sbjct: 1496727 agactgtcaagtacttcaacaatgaacaatttgaagttgagaagtatgacaaatatttaa 1496668 Query: 411 agag 414 |||| Sbjct: 1496667 agag 1496664 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 13 ggtattttttcacctgcatgagcttgatcttcgttatcatctaag 57 |||||||| ||| ||||||||||||||||||||||||||||||| Sbjct: 1497846 ggtattttcgcacttgcatgagcttgatcttcgttatcatctaag 1497802
>dbj|AP000391.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0538C01 Length = 155643 Score = 165 bits (83), Expect = 2e-37 Identities = 121/134 (90%) Strand = Plus / Minus Query: 419 gaggatgctgcactgaaaacccaaagtagcctcgcctacctgaattttgggcaaagtgtt 478 |||||||||||||||||||||||||||||||| ||||||||||| ||||| |||| | | Sbjct: 24973 gaggatgctgcactgaaaacccaaagtagccttgcctacctgaactttggacaaaatatc 24914 Query: 479 atattcagctcggcattatccacagcaatggttttgagctcatatggngtaatgagtggt 538 ||||| |||||||| |||||||| || ||||||||||| ||||| || |||||||||||| Sbjct: 24913 atatttagctcggctttatccacggctatggttttgagttcatacggtgtaatgagtggt 24854 Query: 539 gctctgactgtcgg 552 |||||||||||||| Sbjct: 24853 gctctgactgtcgg 24840 Score = 145 bits (73), Expect = 2e-31 Identities = 94/101 (93%) Strand = Plus / Minus Query: 159 agattggtatggtgtcaagtatacttgcctaccagtttggttccacttttgcttggatta 218 |||||||||||||||||||||||||||| ||| | ||||||||||| ||||||||||||| Sbjct: 25861 agattggtatggtgtcaagtatacttgcatacaaatttggttccacctttgcttggatta 25802 Query: 219 cttcagtttcagttgctacatatattgctttcactttggct 259 |||||||||| |||||||| |||||||||||||| |||||| Sbjct: 25801 cttcagtttctgttgctacttatattgctttcaccttggct 25761 Score = 135 bits (68), Expect = 2e-28 Identities = 83/88 (94%) Strand = Plus / Minus Query: 265 acagtggcggactaagttcaggacagccatgaataaagctgataatgcttctagtacagt 324 |||||||||||| || ||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 25642 acagtggcggaccaaattcaggacagccatgaataaagctgataacgcttctagcacagt 25583 Query: 325 ggcagttgactcccttctgaattatgag 352 ||||||||||||||||||||| |||||| Sbjct: 25582 ggcagttgactcccttctgaactatgag 25555 Score = 133 bits (67), Expect = 7e-28 Identities = 91/99 (91%) Strand = Plus / Minus Query: 56 agccgtcaaactggagctctaaatcgcataattgaccgaggcagtcgcgcaataaattac 115 ||||| |||||||| || ||||||||||||||||| ||||| ||||| || ||||||||| Sbjct: 26114 agccggcaaactggtgccctaaatcgcataattgatcgaggtagtcgtgcgataaattac 26055 Query: 116 attcttacagtgatggtgttcaatgttgttcccacaata 154 || |||||||||||||||||||||||||||||||||||| Sbjct: 26054 atccttacagtgatggtgttcaatgttgttcccacaata 26016 Score = 87.7 bits (44), Expect = 4e-14 Identities = 59/64 (92%) Strand = Plus / Minus Query: 351 agactgtcaaatacttcaacaatgagcaatttgaagttaagaagtatgataaatacttaa 410 |||||||||| |||||||||||||| |||||||||||| |||||||||| ||||| |||| Sbjct: 25451 agactgtcaagtacttcaacaatgaacaatttgaagttgagaagtatgacaaatatttaa 25392 Query: 411 agag 414 |||| Sbjct: 25391 agag 25388 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 13 ggtattttttcacctgcatgagcttgatcttcgttatcatctaag 57 |||||||| ||| ||||||||||||||||||||||||||||||| Sbjct: 26570 ggtattttcgcacttgcatgagcttgatcttcgttatcatctaag 26526
>ref|NM_125212.2| Arabidopsis thaliana STA1 (STARIK 1); ATPase, coupled to transmembrane movement of substances AT5G58270 (STA1) mRNA, complete cds Length = 2363 Score = 71.9 bits (36), Expect = 2e-09 Identities = 195/248 (78%) Strand = Plus / Plus Query: 128 atggtgttcaatgttgttcccacaatactagagattggtatggtgtcaagtatacttgcc 187 ||||| |||||||||||||| || ||| | ||||| |||||| ||| ||||||| || Sbjct: 852 atggttttcaatgttgttcctaccatattggagatatctatggtatcaggtatactggca 911 Query: 188 taccagtttggttccacttttgcttggattacttcagtttcagttgctacatatattgct 247 ||| ||||||| | ||||||| ||||||||||| | || |||| ||||||| | | Sbjct: 912 tacaagtttggagctgcttttgcctggattacttctctctccgttggatcatatatcgtt 971 Query: 248 ttcactttggctatcacacagtggcggactaagttcaggacagccatgaataaagctgat 307 ||||| || ||| | ||||||||||| || ||||| || | || ||||| ||||||||| Sbjct: 972 ttcacattagctgtgacacagtggcgaaccaagtttagaaaggctatgaacaaagctgat 1031 Query: 308 aatgcttctagtacagtggcagttgactcccttctgaattatgagactgtcaaatacttc 367 |||| | |||| ||| ||| |||| || || | |||||||||||||||||||| || Sbjct: 1032 aatgatgctagcacaagggccattgattctctgataaattatgagactgtcaaatatttt 1091 Query: 368 aacaatga 375 |||||||| Sbjct: 1092 aacaatga 1099
>gb|AY142686.1| Arabidopsis thaliana putative ABC transporter protein (At5g58270) mRNA, complete cds Length = 2218 Score = 71.9 bits (36), Expect = 2e-09 Identities = 195/248 (78%) Strand = Plus / Plus Query: 128 atggtgttcaatgttgttcccacaatactagagattggtatggtgtcaagtatacttgcc 187 ||||| |||||||||||||| || ||| | ||||| |||||| ||| ||||||| || Sbjct: 826 atggttttcaatgttgttcctaccatattggagatatctatggtatcaggtatactggca 885 Query: 188 taccagtttggttccacttttgcttggattacttcagtttcagttgctacatatattgct 247 ||| ||||||| | ||||||| ||||||||||| | || |||| ||||||| | | Sbjct: 886 tacaagtttggagctgcttttgcctggattacttctctctccgttggatcatatatcgtt 945 Query: 248 ttcactttggctatcacacagtggcggactaagttcaggacagccatgaataaagctgat 307 ||||| || ||| | ||||||||||| || ||||| || | || ||||| ||||||||| Sbjct: 946 ttcacattagctgtgacacagtggcgaaccaagtttagaaaggctatgaacaaagctgat 1005 Query: 308 aatgcttctagtacagtggcagttgactcccttctgaattatgagactgtcaaatacttc 367 |||| | |||| ||| ||| |||| || || | |||||||||||||||||||| || Sbjct: 1006 aatgatgctagcacaagggccattgattctctgataaattatgagactgtcaaatatttt 1065 Query: 368 aacaatga 375 |||||||| Sbjct: 1066 aacaatga 1073
>gb|AF360334.1| Arabidopsis thaliana putative ABC transporter protein (At5g58270) mRNA, complete cds Length = 2373 Score = 71.9 bits (36), Expect = 2e-09 Identities = 195/248 (78%) Strand = Plus / Plus Query: 128 atggtgttcaatgttgttcccacaatactagagattggtatggtgtcaagtatacttgcc 187 ||||| |||||||||||||| || ||| | ||||| |||||| ||| ||||||| || Sbjct: 849 atggttttcaatgttgttcctaccatattggagatatctatggtatcaggtatactggca 908 Query: 188 taccagtttggttccacttttgcttggattacttcagtttcagttgctacatatattgct 247 ||| ||||||| | ||||||| ||||||||||| | || |||| ||||||| | | Sbjct: 909 tacaagtttggagctgcttttgcctggattacttctctctccgttggatcatatatcgtt 968 Query: 248 ttcactttggctatcacacagtggcggactaagttcaggacagccatgaataaagctgat 307 ||||| || ||| | ||||||||||| || ||||| || | || ||||| ||||||||| Sbjct: 969 ttcacattagctgtgacacagtggcgaaccaagtttagaaaggctatgaacaaagctgat 1028 Query: 308 aatgcttctagtacagtggcagttgactcccttctgaattatgagactgtcaaatacttc 367 |||| | |||| ||| ||| |||| || || | |||||||||||||||||||| || Sbjct: 1029 aatgatgctagcacaagggccattgattctctgataaattatgagactgtcaaatatttt 1088 Query: 368 aacaatga 375 |||||||| Sbjct: 1089 aacaatga 1096
>gb|AF287699.1|AF287699 Arabidopsis thaliana half-molecule ABC transporter ATM3 mRNA, complete cds Length = 2187 Score = 71.9 bits (36), Expect = 2e-09 Identities = 195/248 (78%) Strand = Plus / Plus Query: 128 atggtgttcaatgttgttcccacaatactagagattggtatggtgtcaagtatacttgcc 187 ||||| |||||||||||||| || ||| | ||||| |||||| ||| ||||||| || Sbjct: 826 atggttttcaatgttgttcctaccatattggagatatctatggtatcaggtatactggca 885 Query: 188 taccagtttggttccacttttgcttggattacttcagtttcagttgctacatatattgct 247 ||| ||||||| | ||||||| ||||||||||| | || |||| ||||||| | | Sbjct: 886 tacaagtttggagctgcttttgcctggattacttctctctccgttggatcatatatcgtt 945 Query: 248 ttcactttggctatcacacagtggcggactaagttcaggacagccatgaataaagctgat 307 ||||| || ||| | ||||||||||| || ||||| || | || ||||| ||||||||| Sbjct: 946 ttcacattagctgtgacacagtggcgaaccaagtttagaaaggctatgaacaaagctgat 1005 Query: 308 aatgcttctagtacagtggcagttgactcccttctgaattatgagactgtcaaatacttc 367 |||| | |||| ||| ||| |||| || || | |||||||||||||||||||| || Sbjct: 1006 aatgatgctagcacaagggccattgattctctgataaattatgagactgtcaaatatttt 1065 Query: 368 aacaatga 375 |||||||| Sbjct: 1066 aacaatga 1073
>emb|AJ272202.1|ATH272202 Arabidopsis thaliana mRNA for mitochondrial half-ABC transporter (STA1 gene) Length = 2452 Score = 63.9 bits (32), Expect = 5e-07 Identities = 194/248 (78%) Strand = Plus / Plus Query: 128 atggtgttcaatgttgttcccacaatactagagattggtatggtgtcaagtatacttgcc 187 ||||| |||||||||||||| || ||| | ||||| |||||| ||| ||||||| || Sbjct: 852 atggttttcaatgttgttcctaccatattggagatatctatggtatcaggtatactggca 911 Query: 188 taccagtttggttccacttttgcttggattacttcagtttcagttgctacatatattgct 247 ||| ||||||| | ||||||| ||||||||||| | || |||| ||||||| | | Sbjct: 912 tacaagtttggagctgcttttgcctggattacttctctctccgttggatcatatatcgtt 971 Query: 248 ttcactttggctatcacacagtggcggactaagttcaggacagccatgaataaagctgat 307 ||||| || ||| | ||||||||||| || ||||| || | || ||||| ||||||||| Sbjct: 972 ttcacattagctgtgacacagtggcgaaccaagtttagtaaggctatgaacaaagctgat 1031 Query: 308 aatgcttctagtacagtggcagttgactcccttctgaattatgagactgtcaaatacttc 367 |||| | ||| ||| ||| |||| || || | |||||||||||||||||||| || Sbjct: 1032 aatgatgatagcacaagggccattgattctctgataaattatgagactgtcaaatatttt 1091 Query: 368 aacaatga 375 |||||||| Sbjct: 1092 aacaatga 1099
>gb|AC024866.2| Caenorhabditis elegans cosmid Y74C10AM, complete sequence Length = 8068 Score = 48.1 bits (24), Expect = 0.031 Identities = 36/40 (90%) Strand = Plus / Minus Query: 347 tatgagactgtcaaatacttcaacaatgagcaatttgaag 386 ||||| ||||||||||| ||||| |||||| ||||||||| Sbjct: 5104 tatgaaactgtcaaatatttcaataatgagaaatttgaag 5065
>gb|AF490975.1| Caenorhabditis elegans ABC7 protein mRNA, complete cds Length = 2502 Score = 48.1 bits (24), Expect = 0.031 Identities = 36/40 (90%) Strand = Plus / Plus Query: 347 tatgagactgtcaaatacttcaacaatgagcaatttgaag 386 ||||| ||||||||||| ||||| |||||| ||||||||| Sbjct: 913 tatgaaactgtcaaatatttcaataatgagaaatttgaag 952
>ref|NM_001026659.1| Caenorhabditis elegans Y74C10AR.3 (Y74C10AR.3) mRNA, complete cds Length = 2115 Score = 48.1 bits (24), Expect = 0.031 Identities = 36/40 (90%) Strand = Plus / Plus Query: 347 tatgagactgtcaaatacttcaacaatgagcaatttgaag 386 ||||| ||||||||||| ||||| |||||| ||||||||| Sbjct: 907 tatgaaactgtcaaatatttcaataatgagaaatttgaag 946
>gb|AC146540.2| Gasterosteus aculeatus clone CH213-16D10, complete sequence Length = 212474 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 330 ttgactcccttctgaattatgagactgtcaa 360 ||||||||||||| || |||||||||||||| Sbjct: 165440 ttgactcccttcttaactatgagactgtcaa 165410
>emb|CR550303.18| Mouse DNA sequence from clone RP24-87D8 on chromosome 4, complete sequence Length = 194565 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 211 ttggattacttcagtttcagttg 233 ||||||||||||||||||||||| Sbjct: 100974 ttggattacttcagtttcagttg 100952 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 211 ttggattacttcagtttcagttg 233 ||||||||||||||||||||||| Sbjct: 20847 ttggattacttcagtttcagttg 20825
>emb|BX950196.7| Mouse DNA sequence from clone RP23-287E8 on chromosome 4, complete sequence Length = 170778 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 211 ttggattacttcagtttcagttg 233 ||||||||||||||||||||||| Sbjct: 162265 ttggattacttcagtttcagttg 162287 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 211 ttggattacttcagtttcagttg 233 ||||||||||||||||||||||| Sbjct: 2013 ttggattacttcagtttcagttg 2035
>emb|BX470151.16| Mouse DNA sequence from clone RP23-354H23 on chromosome 4, complete sequence Length = 59157 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 211 ttggattacttcagtttcagttg 233 ||||||||||||||||||||||| Sbjct: 43342 ttggattacttcagtttcagttg 43320
>emb|AL772344.4| Mouse DNA sequence from clone RP23-235J15 on chromosome 4, complete sequence Length = 223771 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 211 ttggattacttcagtttcagttg 233 ||||||||||||||||||||||| Sbjct: 84891 ttggattacttcagtttcagttg 84869
>emb|AL772327.4| Mouse DNA sequence from clone RP23-241B2 on chromosome 4, complete sequence Length = 222631 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 211 ttggattacttcagtttcagttg 233 ||||||||||||||||||||||| Sbjct: 157431 ttggattacttcagtttcagttg 157453 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 211 ttggattacttcagtttcagttg 233 ||||||||||||||||||||||| Sbjct: 88408 ttggattacttcagtttcagttg 88430
>gb|AY705372.1| Comamonas testosteroni strain BR6020 van-iva gene locus, complete sequence Length = 13435 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 341 ctgaattatgagactgtcaaatacttcaacaatgagca 378 |||||||| ||||| ||||| ||||||||||| ||||| Sbjct: 2140 ctgaattacgagaccgtcaagtacttcaacaacgagca 2177
>ref|XM_420301.1| PREDICTED: Gallus gallus similar to ATP-binding cassette, sub-family B, member 7; ATP-binding cassette 7; Anemia, sideroblastic, with spinocerebellar ataxia (LOC422326), mRNA Length = 2575 Score = 44.1 bits (22), Expect = 0.48 Identities = 40/46 (86%) Strand = Plus / Plus Query: 330 ttgactcccttctgaattatgagactgtcaaatacttcaacaatga 375 ||||||| || ||||||||||||||||| || || ||||| ||||| Sbjct: 993 ttgactcactactgaattatgagactgtgaagtatttcaataatga 1038
>emb|CR385576.1| Gallus gallus finished cDNA, clone ChEST91b16 Length = 1681 Score = 44.1 bits (22), Expect = 0.48 Identities = 40/46 (86%) Strand = Plus / Plus Query: 330 ttgactcccttctgaattatgagactgtcaaatacttcaacaatga 375 ||||||| || ||||||||||||||||| || || ||||| ||||| Sbjct: 98 ttgactcactactgaattatgagactgtgaagtatttcaataatga 143
>emb|CT030648.7| Mouse DNA sequence from clone RP24-440M15 on chromosome 17, complete sequence Length = 206631 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 215 attacttcagtttcagttgcta 236 |||||||||||||||||||||| Sbjct: 95905 attacttcagtttcagttgcta 95926
>gb|AC102497.7| Mus musculus chromosome 18, clone RP24-570C15, complete sequence Length = 165977 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 acaatactagagattggtatg 169 ||||||||||||||||||||| Sbjct: 95846 acaatactagagattggtatg 95826
>emb|AL049698.3|HSJ470B24 Human DNA sequence from clone RP3-470B24 on chromosome 6q26-27 Contains the 3' end of a novel gene and the 3' end of the MLLT4 gene for myeloid/lymphoid or mixed-lineage leukemia (trithorax (Drosophila) homolog) translocated gene protein 4 (AF-6), complete sequence Length = 87780 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 458 ctgaattttgggcaaagtgttatat 482 |||||||||||||||||| |||||| Sbjct: 24864 ctgaattttgggcaaagttttatat 24888
>ref|XM_689787.1| PREDICTED: Danio rerio similar to ATP-binding cassette, sub-family B, member 7, mitochondrial (ATP-binding cassette transporter 7) (ABC transporter 7 protein) (LOC566515), mRNA Length = 2358 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 344 aattatgagactgtcaaatacttcaacaatgag 376 |||||||| |||||||| || |||||||||||| Sbjct: 637 aattatgaaactgtcaagtatttcaacaatgag 669
>dbj|AB016897.1| Homo sapiens genomic DNA, chromosome 6q27, complete sequence Length = 331211 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 458 ctgaattttgggcaaagtgttatat 482 |||||||||||||||||| |||||| Sbjct: 258563 ctgaattttgggcaaagttttatat 258539
>dbj|AB011399.1| Homo sapiens gene for AF-6, complete cds Length = 163974 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 458 ctgaattttgggcaaagtgttatat 482 |||||||||||||||||| |||||| Sbjct: 128134 ctgaattttgggcaaagttttatat 128110
>ref|NM_191692.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2385 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 ataaagctgataatgcttct 316 |||||||||||||||||||| Sbjct: 470 ataaagctgataatgcttct 489
>gb|AC093088.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1001_G01, complete sequence Length = 122768 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 18 tttttcacctgcatgagcttgatc 41 ||||| |||||||||||||||||| Sbjct: 80950 ttttttacctgcatgagcttgatc 80973
>gb|AC115508.5| Rattus norvegicus 2 BAC CH230-355B17 (Children's Hospital Oakland Research Institute) complete sequence Length = 209019 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 273 ggactaagttcaggacagccatga 296 ||||||||||||||| |||||||| Sbjct: 47878 ggactaagttcaggagagccatga 47855
>ref|XM_360863.1| Magnaporthe grisea 70-15 hypothetical protein (MG03406.4) partial mRNA Length = 2103 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 gtcaaatacttcaacaatga 375 |||||||||||||||||||| Sbjct: 931 gtcaaatacttcaacaatga 950
>ref|XM_459354.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0E00770g) partial mRNA Length = 1659 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 gttaagaagtatgataaata 405 |||||||||||||||||||| Sbjct: 255 gttaagaagtatgataaata 274
>ref|XM_744351.1| Aspergillus fumigatus Af293 vacuolar ABC heavy metal transporter (Afu2g03090) partial mRNA Length = 2622 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 347 tatgagactgtcaaatacttcaac 370 |||||||||||||| ||||||||| Sbjct: 1321 tatgagactgtcaagtacttcaac 1344
>gb|AF447814.1| Escherichia coli strain CFT073 pathogenicity island II, partial sequence Length = 71684 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 344 aattatgagactgtcaaata 363 |||||||||||||||||||| Sbjct: 14008 aattatgagactgtcaaata 13989
>gb|AE014075.1| Escherichia coli CFT073, complete genome Length = 5231428 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 344 aattatgagactgtcaaata 363 |||||||||||||||||||| Sbjct: 264171 aattatgagactgtcaaata 264152
>emb|AL596208.3| Human DNA sequence from clone RP11-18M16 on chromosome 6, complete sequence Length = 114796 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 493 attatccacagcaatggttttgag 516 |||||||| ||||||||||||||| Sbjct: 97177 attatccagagcaatggttttgag 97200
>emb|AL161629.10| Human DNA sequence from clone RP11-406A20 on chromosome 9q21.33-22.2 Contains two novel genes and a interleukin 6 receptor (IL6R) pseudogene, complete sequence Length = 160341 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 445 tagcctcgcctacctgaatt 464 |||||||||||||||||||| Sbjct: 95447 tagcctcgcctacctgaatt 95428
>emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS767 of Debaryomyces hansenii Length = 2037969 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 gttaagaagtatgataaata 405 |||||||||||||||||||| Sbjct: 44693 gttaagaagtatgataaata 44712
>gb|AC166246.1| Mus musculus BAC clone RP24-80F22 from chromosome 17, complete sequence Length = 194452 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 attacttcagtttcagttgc 234 |||||||||||||||||||| Sbjct: 74657 attacttcagtttcagttgc 74676
>gb|AC108048.6| Homo sapiens BAC clone RP11-323K3 from 4, complete sequence Length = 220568 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 359 aaatacttcaacaatgagcaattt 382 ||||||||||||||||| |||||| Sbjct: 170768 aaatacttcaacaatgaccaattt 170745
>gb|AC151285.2| Mus musculus BAC clone RP23-426D6 from chromosome 17, complete sequence Length = 225650 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 attacttcagtttcagttgc 234 |||||||||||||||||||| Sbjct: 110163 attacttcagtttcagttgc 110182
>gb|AF348462.1|AF348462 Lycopersicon esculentum Cryptochrome 1b (Cry1b) gene, complete cds Length = 3848 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 348 atgagactgtcaaatacttcaaca 371 |||||||||||||| ||||||||| Sbjct: 2691 atgagactgtcaaacacttcaaca 2668
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 18 tttttcacctgcatgagcttgatc 41 ||||| |||||||||||||||||| Sbjct: 1125339 ttttttacctgcatgagcttgatc 1125362
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 ataaagctgataatgcttct 316 |||||||||||||||||||| Sbjct: 29481328 ataaagctgataatgcttct 29481309
>dbj|AP002901.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0456F08 Length = 156850 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 ataaagctgataatgcttct 316 |||||||||||||||||||| Sbjct: 47602 ataaagctgataatgcttct 47583
>dbj|BS000126.1| Pan troglodytes chromosome 22 clone:PTB-128A24, map 22, complete sequences Length = 207747 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 aattatgagactgtcaaata 363 |||||||||||||||||||| Sbjct: 49291 aattatgagactgtcaaata 49310
>dbj|AK121129.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023075E10, full insert sequence Length = 3971 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 ataaagctgataatgcttct 316 |||||||||||||||||||| Sbjct: 1429 ataaagctgataatgcttct 1448
>dbj|AK065353.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013021E05, full insert sequence Length = 2779 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 ataaagctgataatgcttct 316 |||||||||||||||||||| Sbjct: 250 ataaagctgataatgcttct 269
>dbj|AP001730.1| Homo sapiens genomic DNA, chromosome 21q, section 74/105 Length = 340000 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 aattatgagactgtcaaata 363 |||||||||||||||||||| Sbjct: 211676 aattatgagactgtcaaata 211695
>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica Length = 2303261 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 tagagattggtatggtgtca 175 |||||||||||||||||||| Sbjct: 1981578 tagagattggtatggtgtca 1981559
>emb|AL929376.7| Mouse DNA sequence from clone RP23-68L5 on chromosome 4, complete sequence Length = 40270 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 gattacttcagtttcagttg 233 |||||||||||||||||||| Sbjct: 21958 gattacttcagtttcagttg 21939
>gb|M32983.1|PAFNP4B Parainfluenza virus type 4B nucleocapsid (NP) mRNA, complete cds Length = 1882 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 530 atgagtggtgctctgactgt 549 |||||||||||||||||||| Sbjct: 1544 atgagtggtgctctgactgt 1525
>dbj|AP000159.1| Homo sapiens genomic DNA, chromosome 21q22.2, DSCR region, clone D47-S479, segment 11/16, complete sequence Length = 100000 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 aattatgagactgtcaaata 363 |||||||||||||||||||| Sbjct: 59093 aattatgagactgtcaaata 59112
>dbj|AP000017.2| Homo sapiens genomic DNA of 21q22.2 Down Syndrome region, segment 8/13 Length = 100000 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 aattatgagactgtcaaata 363 |||||||||||||||||||| Sbjct: 93489 aattatgagactgtcaaata 93508
>dbj|AP001415.1| Homo sapiens genomic DNA, chromosome 21q22.2, clone:D32, LB7T-ERG region, complete sequence Length = 53797 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 aattatgagactgtcaaata 363 |||||||||||||||||||| Sbjct: 44807 aattatgagactgtcaaata 44826 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,900,495 Number of Sequences: 3902068 Number of extensions: 4900495 Number of successful extensions: 86147 Number of sequences better than 10.0: 57 Number of HSP's better than 10.0 without gapping: 57 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 85889 Number of HSP's gapped (non-prelim): 253 length of query: 552 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 529 effective length of database: 17,143,297,704 effective search space: 9068804485416 effective search space used: 9068804485416 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)