Clone Name	bags4e11
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	dbj|AK069811.1| Oryza sativa (japonica cultivar-group) cDNA clon...	628	e-177
2	dbj|AB037154.1| Oryza sativa (japonica cultivar-group) OsRPT2b m...	628	e-177
3	ref|NM_185558.2| Oryza sativa (japonica cultivar-group), mRNA	454	e-124
4	ref|XM_507415.1| PREDICTED Oryza sativa (japonica cultivar-group...	454	e-124
5	ref|XM_506590.2| PREDICTED Oryza sativa (japonica cultivar-group...	454	e-124
6	dbj|AK105861.1| Oryza sativa (japonica cultivar-group) cDNA clon...	454	e-124
7	dbj|AK099264.1| Oryza sativa (japonica cultivar-group) cDNA clon...	454	e-124
8	dbj|AK058311.1| Oryza sativa (japonica cultivar-group) cDNA clon...	454	e-124
9	dbj|D17789.1|RICHTBP2 Oryza sativa (japonica cultivar-group) mRN...	454	e-124
10	gb|AY105631.1| Zea mays PCO101908 mRNA sequence	430	e-117
11	dbj|AK070759.1| Oryza sativa (japonica cultivar-group) cDNA clon...	307	2e-80
12	gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3	303	3e-79
13	gb|AC137931.3| Oryza sativa (japonica cultivar-group) chromosome...	303	3e-79
14	dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...	303	3e-79
15	gb|AY108940.1| Zea mays PCO101909 mRNA sequence	266	7e-68
16	dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...	240	4e-60
17	dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic D...	240	4e-60
18	ref|NM_119048.2| Arabidopsis thaliana RPT2A; ATPase AT4G29040 (R...	222	9e-55
19	gb|AY034975.1| Arabidopsis thaliana putative 26S proteasome subu...	222	9e-55
20	dbj|AB161192.1| Arabidopsis thaliana HLR mRNA for 26S proteasome...	222	9e-55
21	gb|AF123391.1|AF123391 Arabidopsis thaliana 26S proteasome AAA-A...	222	9e-55
22	gb|AY105318.1| Zea mays PCO073117 mRNA sequence	206	5e-50
23	gb|AF432345.1| Tortula ruralis 26S proteasome regulatory subunit...	194	2e-46
24	ref|NM_127572.2| Arabidopsis thaliana ATP binding / ATPase/ hydr...	182	8e-43
25	gb|DQ222507.1| Solanum tuberosum clone 115D06 26S proteasome sub...	182	8e-43
26	gb|AY056335.1| Arabidopsis thaliana putative 26S proteasome subu...	182	8e-43
27	gb|AY035072.1| Arabidopsis thaliana putative 26S proteasome subu...	182	8e-43
28	emb|BX819727.1|CNS0A8HI Arabidopsis thaliana Full-length cDNA Co...	182	8e-43
29	gb|AC161749.3| Medicago truncatula chromosome 7 BAC clone mth2-1...	176	5e-41
30	gb|AC150776.2| Medicago truncatula chromosome 7 BAC clone mte1-4...	176	5e-41
31	gb|AF372977.1|AF372977 Arabidopsis thaliana At2g20140/T2G17.6 mR...	174	2e-40
32	gb|AY087584.1| Arabidopsis thaliana clone 36815 mRNA, complete s...	174	2e-40
33	ref|XM_791137.1| PREDICTED: Strongylocentrotus purpuratus simila...	117	4e-23
34	emb|AL161574.2|ATCHRIV70 Arabidopsis thaliana DNA chromosome 4, ...	111	2e-21
35	emb|AL078469.2|ATF25O24 Arabidopsis thaliana DNA chromosome 4, B...	111	2e-21
36	emb|AL078470.1|ATF19B15 Arabidopsis thaliana DNA chromosome 4, B...	111	2e-21
37	gb|AC006081.4| Arabidopsis thaliana chromosome 2 clone T2G17 map...	101	2e-18
38	emb|AJ293726.1|BNA293726 Brassica napus homologue of AT4g29030 g...	86	1e-13
39	emb|AJ291500.1|BNA291500 Brassica napus homologue of SPH gene, A...	82	2e-12
40	gb|AF517885.1| Griffithsia japonica isolate Gj112 26S proteasome...	68	3e-08
41	gb|BC049471.1| Danio rerio proteasome (prosome, macropain) 26S s...	62	2e-06
42	ref|NM_200033.1| Danio rerio proteasome (prosome, macropain) 26S...	62	2e-06
43	gb|BC054287.1| Xenopus laevis protease (prosome, macropain) 26S ...	62	2e-06
44	ref|XM_694176.1| PREDICTED: Danio rerio similar to Proteasome (p...	62	2e-06
45	gb|AC087422.1|AC087422 Caenorhabditis briggsae cosmid CB033P12, ...	60	8e-06
46	dbj|AK058779.1| Oryza sativa (japonica cultivar-group) cDNA clon...	60	8e-06
47	gb|AY103957.1| Zea mays PCO116832 mRNA sequence	60	8e-06
48	ref|XM_660561.1| Cryptosporidium hominis TU502 26S proteasome AA...	58	3e-05
49	gb|AF016440.2| Caenorhabditis elegans cosmid F29G9, complete seq...	58	3e-05
50	ref|NM_072157.3| Caenorhabditis elegans F29G9.5 (ATPase) mRNA, c...	58	3e-05
51	emb|AL115143.1|CNS01C6N Botrytis cinerea strain T4 cDNA library	58	3e-05
52	ref|XM_360102.1| Magnaporthe grisea 70-15 hypothetical protein (...	56	1e-04
53	ref|NM_204958.1| Gallus gallus proteasome (prosome, macropain) 2...	56	1e-04
54	gb|U60187.1|GGU60187 Gallus gallus 26S ATPase complex subunit 4 ...	56	1e-04
55	gb|BT016035.1| Drosophila melanogaster RE01104 full insert cDNA	54	5e-04
56	gb|DQ440313.1| Aedes aegypti clone AET-397 26S proteasome regula...	54	5e-04
57	gb|AY113319.1| Drosophila melanogaster AT28212 full insert cDNA	54	5e-04
58	ref|NM_169308.2| Drosophila melanogaster Rpt3R CG9475-RB, transc...	54	5e-04
59	ref|NM_141681.1| Drosophila melanogaster Rpt3R CG9475-RA, transc...	54	5e-04
60	gb|AC008316.3|AC008316 Drosophila melanogaster, chromosome 3R, r...	54	5e-04
61	gb|AC008315.9|AC008315 Drosophila melanogaster, chromosome 3R, r...	54	5e-04
62	gb|AE003684.4| Drosophila melanogaster chromosome 3R, section 22...	54	5e-04
63	emb|CR942586.2| Xenopus tropicalis finished cDNA, clone TGas066b09	54	5e-04
64	ref|NM_125854.2| Arabidopsis thaliana ATP binding / nucleoside-t...	52	0.002
65	ref|XM_712719.1| Candida albicans SC5314 putative proteasome reg...	52	0.002
66	ref|XM_712625.1| Candida albicans SC5314 putative proteasome reg...	52	0.002
67	emb|Z93386.1|CER11H6 Caenorhabditis elegans Cosmid R11H6, comple...	52	0.002
68	gb|AF475102.1| Triticum aestivum tat binding protein mRNA, parti...	52	0.002
69	gb|AF526250.1| Chlamys farreri clone iolscfcl363ct379cn399 ribos...	52	0.002
70	dbj|AB223595.1| Aspergillus oryzae cDNA, contig sequence: AoEST0433	52	0.002
71	dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111	52	0.002
72	dbj|AB010076.1| Arabidopsis thaliana genomic DNA, chromosome 5, ...	52	0.002
73	gb|AY540192.1| Oreochromis mossambicus proteasome 26S ATPase sub...	50	0.008
74	ref|XM_736668.1| Plasmodium chabaudi chabaudi 26S proteasome reg...	50	0.008
75	gb|AY620960.1| Pennisetum glaucum truncated vacuolar ATPase subu...	50	0.008
76	gb|BT018175.1| Zea mays clone EL01N0557C11.c mRNA sequence	48	0.030
77	ref|XM_654725.1| Aspergillus nidulans FGSC A4 hypothetical prote...	48	0.030
78	ref|XM_764056.1| Giardia lamblia ATCC 50803 26S proteasome ATPas...	48	0.030
79	ref|XM_721689.1| Plasmodium yoelii yoelii str. 17XNL 26S proteas...	48	0.030
80	ref|XM_948843.1| Theileria annulata strain Ankara 26S proteasome...	48	0.030
81	gb|U88170.1| Caenorhabditis elegans cosmid C10G11, complete sequ...	48	0.030
82	emb|AJ297368.1|GLA297368 Giardia lamblia partial s4 gene for ATP...	48	0.030
83	dbj|AB228520.1| Aspergillus oryzae cDNA, contig sequence: AoEST5393	48	0.030
84	gb|AY057456.1| Stizostedion vitreum clone C1-3 major histocompat...	48	0.030
85	ref|NM_059410.2| Caenorhabditis elegans C10G11.8 (ATPase) mRNA, ...	48	0.030
86	ref|NM_114573.2| Arabidopsis thaliana FTSH7; ATP-dependent pepti...	46	0.12
87	gb|AY551094.1| Crassostrea gigas cavortin mRNA, complete cds	46	0.12
88	gb|BT016708.1| Zea mays clone Contig541 mRNA sequence	46	0.12
89	gb|BT018602.1| Zea mays clone EL01N0449E02.d mRNA sequence	46	0.12
90	gb|BT016274.1| Zea mays clone Contig107 mRNA sequence	46	0.12
91	gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chr...	46	0.12
92	gb|AY857765.1| Triticum monococcum glyceraldehyde-3-phosphate de...	46	0.12
93	gb|AY190742.1| Pagrus major 40S ribosomal protein S15A mRNA, com...	46	0.12
94	gb|BT015300.1| Drosophila melanogaster AT22779 full insert cDNA	46	0.12
95	gb|AY549572.1| Chlamydomonas reinhardtii mitochondrial NADH:ubiq...	46	0.12
96	ref|XM_570849.1| Cryptococcus neoformans var. neoformans JEC21 e...	46	0.12
97	ref|XM_648741.1| Entamoeba histolytica HM-1:IMSS 26S proteasome ...	46	0.12
98	gb|AY223112.1| Schistosoma japonicum clone ZZD1382 mRNA sequence	46	0.12
99	gb|AY222865.1| Schistosoma japonicum clone ZZD1198 mRNA sequence	46	0.12
100	ref|XM_667923.1| Plasmodium berghei strain ANKA 26S proteasome r...	46	0.12
101	emb|AJ619759.1| Polytomella sp. Pringsheim 198.80 mitochondrial ...	46	0.12
102	emb|Z29366.1|SPMTS2MR S.pombe(972) mts2 mRNA for 26S protease su...	46	0.12
103	gb|BT000368.1| Arabidopsis thaliana FtsH metalloprotease-like pr...	46	0.12
104	ref|NM_001015906.2| Xenopus tropicalis AFG3(ATPase family gene 3...	46	0.12
105	emb|AL133292.3|ATF13I12 Arabidopsis thaliana DNA chromosome 3, B...	46	0.12
106	emb|AL121863.1|SPBC4 S.pombe chromosome II cosmid c4	46	0.12
107	gb|AY122071.1| Drosophila melanogaster AT15262 full insert cDNA	46	0.12
108	gb|AY113216.1| Drosophila melanogaster AT07420 full insert cDNA	46	0.12
109	gb|AY099737.1| Arabidopsis thaliana FtsH metalloprotease-like pr...	46	0.12
110	gb|AE010283.1| Pyrococcus furiosus DSM 3638, section 158 of 173 ...	46	0.12
111	ref|XM_628150.1| Cryptosporidium parvum Iowa II predicted AFG1 A...	46	0.12
112	ref|NM_001021391.1| Schizosaccharomyces pombe 972h- 19S proteaso...	46	0.12
113	gb|AF309805.1|AF309805 Pneumocystis carinii f. sp. carinii gluta...	46	0.12
114	gb|AY967593.1| Schmidtea mediterranea clone NBE.3.05B mRNA sequence	46	0.12
115	gb|AF304353.1|AF304353 Lampetra fluviatilis endophilin SH3p4 mRN...	46	0.12
116	gb|BC002907.2| Homo sapiens hypothetical protein FLJ20512, mRNA ...	46	0.12
117	gb|BC002897.2| Homo sapiens zinc finger protein 343, mRNA (cDNA ...	46	0.12
118	gb|AY849619.1| Magnaporthe grisea transporter-like protein mRNA,...	46	0.12
119	emb|CR926435.2| Xenopus tropicalis finished cDNA, clone TTpA010o23	46	0.12
120	gb|AY609483.1| Sus scrofa clone Clu_131.scr.msk.p1.Contig2, mRNA...	46	0.12
121	ref|NM_125277.2| Arabidopsis thaliana FTSH9; ATP-dependent pepti...	44	0.47
122	ref|NM_121529.1| Arabidopsis thaliana FTSH6; ATP-dependent pepti...	44	0.47
123	ref|XM_641634.1| Dictyostelium discoideum hypothetical protein (...	44	0.47
124	gb|BC005783.1| Mus musculus proteasome (prosome, macropain) 26S ...	44	0.47
125	gb|BT015177.1| Drosophila melanogaster SD19814 full insert cDNA	44	0.47
126	gb|AE017261.1| Picrophilus torridus DSM 9790, complete genome	44	0.47
127	ref|NM_008948.1| Mus musculus proteasome (prosome, macropain) 26...	44	0.47
128	gb|BC043056.1| Mus musculus AFG3(ATPase family gene 3)-like 2 (y...	44	0.47
129	gb|BC036999.1| Mus musculus AFG3(ATPase family gene 3)-like 2 (y...	44	0.47
130	gb|BC021380.1| Mus musculus AFG3(ATPase family gene 3)-like 2 (y...	44	0.47
131	ref|XM_001000481.1| PREDICTED: Mus musculus AFG3(ATPase family g...	44	0.47
132	ref|XM_128950.7| PREDICTED: Mus musculus AFG3(ATPase family gene...	44	0.47
133	gb|BC060064.1| Mus musculus AFG3(ATPase family gene 3)-like 1 (y...	44	0.47
134	gb|AC158362.5| Mus musculus BAC clone RP23-214K5 from chromosome...	44	0.47
135	gb|DQ446953.1| Arabidopsis thaliana clone pENTR221-At5g15250 Fts...	44	0.47
136	gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome	44	0.47
137	emb|AL591974.1| Listeria monocytogenes strain EGD, complete geno...	44	0.47
138	emb|AL596164.1| Listeria innocua Clip11262 complete genome, segm...	44	0.47
139	emb|AL590447.1|CNS07EGE chromosome VII of strain GB-M1 of Enceph...	44	0.47
140	emb|AL353993.1|ATF8M21 Arabidopsis thaliana DNA chromosome 5, BA...	44	0.47
141	emb|AJ420188.1|FSY420188 Fagus sylvatica partial mRNA for ACC sy...	44	0.47
142	gb|BC056978.1| Mus musculus AFG3(ATPase family gene 3)-like 1 (y...	44	0.47
143	gb|AC154125.7| Mus musculus chromosome 18, clone RP23-121M18, co...	44	0.47
144	emb|AJ505009.1|DLA505009 Dicentrarchus labrax partially processe...	44	0.47
145	dbj|AB236766.1| Trifolium pratense RNA for putative DEAD-box pro...	44	0.47
146	dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete g...	44	0.47
147	dbj|AK149970.1| Mus musculus bone marrow macrophage cDNA, RIKEN ...	44	0.47
148	dbj|AK152018.1| Mus musculus bone marrow macrophage cDNA, RIKEN ...	44	0.47
149	dbj|AK152727.1| Mus musculus bone marrow macrophage cDNA, RIKEN ...	44	0.47
150	dbj|AK151370.1| Mus musculus bone marrow macrophage cDNA, RIKEN ...	44	0.47
151	dbj|AK164537.1| Mus musculus 13 days embryo heart cDNA, RIKEN fu...	44	0.47
152	dbj|AK152115.1| Mus musculus bone marrow macrophage cDNA, RIKEN ...	44	0.47
153	dbj|AK151207.1| Mus musculus bone marrow macrophage cDNA, RIKEN ...	44	0.47
154	dbj|AK150189.1| Mus musculus bone marrow macrophage cDNA, RIKEN ...	44	0.47
155	dbj|AK168668.1| Mus musculus 17 days embryo kidney cDNA, RIKEN f...	44	0.47
156	dbj|AK168616.1| Mus musculus 17 days pregnant adult female amnio...	44	0.47
157	gb|AY059856.1| Arabidopsis thaliana cell division protein FtsH (...	44	0.47
158	dbj|AK159647.1| Mus musculus osteoclast-like cell cDNA, RIKEN fu...	44	0.47
159	dbj|AK168263.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length...	44	0.47
160	dbj|AK168244.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length...	44	0.47
161	dbj|AK167061.1| Mus musculus blastocyst blastocyst cDNA, RIKEN f...	44	0.47
162	dbj|AK167964.1| Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-...	44	0.47
163	dbj|AK167002.1| Mus musculus blastocyst blastocyst cDNA, RIKEN f...	44	0.47
164	gb|AF329695.1|AF329695 Mus musculus ATP-dependent zinc metallopr...	44	0.47
165	dbj|AK006708.1| Mus musculus adult male testis cDNA, RIKEN full-...	44	0.47
166	gb|AY050236.1| Drosophila melanogaster SD02116 full length cDNA	44	0.47
167	dbj|AK080118.1| Mus musculus adult male aorta and vein cDNA, RIK...	44	0.47
168	dbj|AK002542.1| Mus musculus adult male kidney cDNA, RIKEN full-...	44	0.47
169	dbj|AK083043.1| Mus musculus 12 days embryo spinal cord cDNA, RI...	44	0.47
170	gb|AC141881.4| Mus musculus BAC clone RP24-226C9 from chromosome...	44	0.47
171	gb|BC043320.1| Mus musculus AFG3(ATPase family gene 3)-like 1 (y...	44	0.47
172	dbj|AB040858.2| Mus musculus TBP1/PSMC3 gene for proteasomal ATP...	44	0.47
173	ref|XM_341714.2| PREDICTED: Rattus norvegicus AFG3(ATPase family...	44	0.47
174	dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome	44	0.47
175	dbj|AK208850.1| Mus musculus cDNA, clone:Y2G0112P12, strand:minu...	44	0.47
176	dbj|AB016885.1| Arabidopsis thaliana genomic DNA, chromosome 5, ...	44	0.47
177	gb|AY902337.1| Mus musculus strain CAST/EiJ proteasome (prosome,...	44	0.47
178	gb|BT020983.1| Bos taurus proteasome (prosome, macropain) 26S su...	44	0.47
179	gb|AF049750.1|AF049750 Monodelphis domestica ModoVL10c Ig lambda...	44	0.47
180	ref|NM_054070.2| Mus musculus AFG3(ATPase family gene 3)-like 1 ...	44	0.47
181	ref|NM_001014855.1| Bos taurus proteasome 26S ATPase subunit 1 (...	44	0.47
182	emb|AL691439.8| Mouse DNA sequence from clone RP23-263H8 on chro...	44	0.47
183	dbj|D49686.1| Mus musculus mRNA for Tat binding protein-1, compl...	44	0.47
184	gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome	44	0.47
185	gb|AE017197.1| Rickettsia typhi str. Wilmington complete genome	42	1.9
186	gb|AC114434.4| Rattus norvegicus 1 BAC CH230-210C18 (Children's ...	42	1.9
187	ref|XM_419391.1| PREDICTED: Gallus gallus similar to Nuclear val...	42	1.9
188	gb|BT014925.1| Drosophila melanogaster AT18965 full insert cDNA	42	1.9
189	gb|AY533301.1| Petroselinum crispum mitogen-activated protein ki...	42	1.9
190	emb|AJ249225.1|XLA249225 Xenopus laevis mRNA for XFD-4' protein ...	42	1.9
191	gb|AF460237.1| Solanum tuberosum Kunitz-type enzyme inhibitor S9...	42	1.9
192	emb|AJ786652.1| Pisum sativum mRNA for Ftsh-like protease (ftsh1...	42	1.9
193	ref|XM_741493.1| Aspergillus fumigatus Af293 membrane-spanning A...	42	1.9
194	ref|XM_647974.1| Entamoeba histolytica HM-1:IMSS AAA family ATPa...	42	1.9
195	emb|CR689180.2|CNS0FUQ0 Tetraodon nigroviridis full-length cDNA	42	1.9
196	emb|BX060993.1|CNS09J85 Single read from an extremity of a full-...	42	1.9
197	emb|BX038369.1|CNS091RP Single read from an extremity of a full-...	42	1.9
198	emb|BX019099.1|CNS08MWF Single read from an extremity of a full-...	42	1.9
199	emb|BX017976.1|CNS08M18 Single read from an extremity of a full-...	42	1.9
200	emb|BX009769.1|CNS08FP9 Single read from an extremity of a full-...	42	1.9
201	emb|AJ312288.1|CEL312288 Caenorhabditis elegans partial mRNA for...	42	1.9
202	dbj|AB080201.1| Caenorhabditis elegans mRNA for C2-RGS protein, ...	42	1.9
203	gb|AF465934.1| Elaeis oleifera DNA binding protein (DNAbp) mRNA,...	42	1.9
204	gb|AF456360.1|AF456360 Caenorhabditis elegans immunoglobulin dom...	42	1.9
205	ref|XM_687589.1| PREDICTED: Danio rerio similar to AFG3 ATPase f...	42	1.9
206	ref|XM_692535.1| PREDICTED: Danio rerio similar to AFG3 ATPase f...	42	1.9
207	ref|XM_625714.1| Cryptosporidium parvum Iowa II 26S proteasome r...	42	1.9
208	gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 255...	42	1.9
209	gb|AF343876.1|AF343876 Clonorchis sinensis proline-rich antigen ...	42	1.9
210	dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D...	42	1.9
211	gb|AF302079.1|AF302079 Homo sapiens HSP22-like protein interacti...	42	1.9
212	gb|AY074433.1| Trichosurus vulpecula clone TrvuVK172 immunoglobu...	42	1.9
213	gb|AY074427.1| Trichosurus vulpecula clone TrvuVK138 immunoglobu...	42	1.9
214	dbj|D13758.1|RICSS230 Oryza sativa ss230 mRNA for ras-related GT...	42	1.9
215	dbj|AP002854.2| Oryza sativa (japonica cultivar-group) genomic D...	42	1.9
216	emb|BX000484.12| Zebrafish DNA sequence from clone CH211-12E1 in...	42	1.9
217	ref|XM_312924.2| Anopheles gambiae str. PEST ENSANGP00000014726 ...	42	1.9
218	ref|XM_312923.2| Anopheles gambiae str. PEST ENSANGP00000014769 ...	42	1.9
219	ref|XM_312720.2| Anopheles gambiae str. PEST ENSANGP00000017106 ...	42	1.9
220	ref|XM_312719.2| Anopheles gambiae str. PEST ENSANGP00000017098 ...	42	1.9
221	gb|AF177671.1|AF177671 Rattus norvegicus ATX1 homolog protein Ra...	42	1.9
222	gb|AF130979.1|AF130979 Homo sapiens SH3 domain-containing protei...	42	1.9
223	dbj|AK065612.1| Oryza sativa (japonica cultivar-group) cDNA clon...	42	1.9
224	gb|AY109271.1| Zea mays PCO074636 mRNA sequence	42	1.9
225	gb|AY106084.1| Zea mays PCO072275 mRNA sequence	42	1.9
226	gb|AF026844.1|AF026844 Homo sapiens ribosomal protein L41 mRNA, ...	42	1.9
227	gb|U71195.1|GMU71195 Glycine max napin-type 2S albumin 3 mRNA, c...	42	1.9
228	dbj|AB080019.1| Xenopus laevis mRNA for galectin family xgalecti...	42	1.9
229	gb|AF074334.1|AF074334 Drosophila melanogaster cyclin H homolog ...	42	1.9
230	gb|U61844.1|BFU61844 Bacillus firmus hypoxanthine-guanine phosph...	42	1.9
231	dbj|AB018544.1| Hydra magnipapillata mRNA for Hym-176 preprohorm...	42	1.9
232	dbj|AB071016.1| Oryza sativa (japonica cultivar-group) OsRPT5b m...	42	1.9
233	ref|NM_123592.2| Arabidopsis thaliana VAR1 (VARIEGATED 1); ATP-d...	40	7.3
234	ref|XM_633582.1| Dictyostelium discoideum Peptidase M41, FtsH do...	40	7.3
235	ref|XM_550086.1| Oryza sativa (japonica cultivar-group), mRNA	40	7.3
236	ref|XM_471556.1| Oryza sativa (japonica cultivar-group), predic...	40	7.3
237	gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complet...	40	7.3
238	gb|BT018916.1| Zea mays clone EL01T0404G12.d mRNA sequence	40	7.3
239	gb|BC071538.1| Danio rerio proteasome (prosome, macropain) 26S s...	40	7.3
240	gb|AY673996.1| Gracilaria tenuistipitata var. liui chloroplast, ...	40	7.3
241	gb|BC073566.1| Xenopus laevis hypothetical protein LOC443667, mR...	40	7.3
242	gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome	40	7.3
243	ref|XM_421449.1| PREDICTED: Gallus gallus similar to RIKEN cDNA ...	40	7.3
244	gb|BC071038.1| Xenopus laevis hypothetical protein LOC432063, mR...	40	7.3
245	ref|NM_001006378.1| Gallus gallus vacuolar protein sorting 4 hom...	40	7.3
246	ref|XM_708910.1| Candida albicans SC5314 hypothetical protein (C...	40	7.3
247	ref|XM_708852.1| Candida albicans SC5314 hypothetical protein (C...	40	7.3
248	ref|XR_003282.1| PREDICTED: Mus musculus similar to vacuolar pro...	40	7.3
249	ref|XR_004725.1| PREDICTED: Mus musculus similar to vacuolar pro...	40	7.3
250	gb|AC092143.4| Homo sapiens chromosome 16 clone RP11-566K11, com...	40	7.3
251	ref|XM_382204.1| Gibberella zeae PH-1 chromosome 1 hypothetical ...	40	7.3
252	emb|AM111094.1| Pseudoalteromonas sp. 8060 partial 16S rRNA gene	40	7.3
253	emb|CR727357.3|CNS0GO6B Tetraodon nigroviridis full-length cDNA	40	7.3
254	emb|CR699648.2|CNS0G2SS Tetraodon nigroviridis full-length cDNA	40	7.3
255	emb|CR690609.3|CNS0FVTP Tetraodon nigroviridis full-length cDNA	40	7.3
256	emb|CR685247.2|CNS0FROR Tetraodon nigroviridis full-length cDNA	40	7.3
257	emb|CR684460.2|CNS0FR2W Tetraodon nigroviridis full-length cDNA	40	7.3
258	emb|CR675713.2|CNS0FKCN Tetraodon nigroviridis full-length cDNA	40	7.3
259	emb|CR671862.3|CNS0FHDO Tetraodon nigroviridis full-length cDNA	40	7.3
260	emb|CR671048.2|CNS0FGR2 Tetraodon nigroviridis full-length cDNA	40	7.3
261	emb|CR652378.2|CNS0F2CG Tetraodon nigroviridis full-length cDNA	40	7.3
262	gb|CP000284.1| Methylobacillus flagellatus KT, complete genome	40	7.3
263	emb|AL390074.17| Human DNA sequence from clone RP11-294H11 on ch...	40	7.3
264	ref|XM_505319.1| Yarrowia lipolytica CLIB122, YALI0F12155g predi...	40	7.3
265	emb|AL049859.7|HSJ826A18 Human DNA sequence from clone RP5-826A1...	40	7.3
266	ref|XM_969766.1| PREDICTED: Tribolium castaneum similar to CG528...	40	7.3
267	gb|AF332134.1| Medicago sativa FtsH protease (FtsH) mRNA, comple...	40	7.3
268	ref|XM_780555.1| PREDICTED: Strongylocentrotus purpuratus simila...	40	7.3
269	emb|BX571661.1| Wolinella succinogenes, complete genome; segment...	40	7.3
270	emb|AL662955.3|OSJN00158 Oryza sativa genomic DNA, chromosome 4,...	40	7.3
271	emb|AJ010592.2|GTAJ10592 Guillardia theta DNA for complete seque...	40	7.3
272	gb|AF499028.1| Oryza sativa (japonica cultivar-group) AAA-ATPase...	40	7.3
273	emb|AJ719395.1| Gallus gallus mRNA for hypothetical protein, clo...	40	7.3
274	emb|AJ720732.1| Gallus gallus mRNA for hypothetical protein, clo...	40	7.3
275	gb|AY126987.1| Arabidopsis thaliana AT5g42270/K5J14_7 mRNA, comp...	40	7.3
276	ref|NM_001002091.1| Danio rerio proteasome (prosome, macropain) ...	40	7.3
277	gb|DQ397567.1| Cenarchaeum symbiosum clone C07B06, complete sequ...	40	7.3
278	gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome	40	7.3
279	emb|BX890571.10| Zebrafish DNA sequence from clone CH211-57F7, c...	40	7.3
280	gb|AY277738.1| Lycopersicon esculentum putative FtsH protease mR...	40	7.3
281	dbj|AB225457.1| Aspergillus oryzae cDNA, contig sequence: AoEST2310	40	7.3
282	gb|AF020187.1| Amblyomma americanum ecdsyteroid receptor (AamEcR...	40	7.3
283	gb|AC154287.2| Mus musculus BAC clone RP24-484I9 from chromosome...	40	7.3
284	ref|XM_692934.1| PREDICTED: Danio rerio similar to Fignl1-prov p...	40	7.3
285	ref|NM_065299.2| Caenorhabditis elegans Myosin Light Chain famil...	40	7.3
286	emb|BX255889.7| Zebrafish DNA sequence from clone CH211-270O7 in...	40	7.3
287	dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...	40	7.3
288	dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...	40	7.3
289	gb|AC133919.3| Homo sapiens chromosome 16 clone RP11-356C4, comp...	40	7.3
290	gb|AY588961.1| Uncultured Pseudoalteromonas sp. clone DE6.7 16S ...	40	7.3
291	gb|AC093915.2| Homo sapiens BAC clone RP11-785G17 from 2, comple...	40	7.3
292	gb|AC011808.4|AC011808 Arabidopsis thaliana chromosome I BAC F19...	40	7.3
293	dbj|AP002913.1| Oryza sativa (japonica cultivar-group) genomic D...	40	7.3
294	dbj|AP002483.1| Oryza sativa (japonica cultivar-group) genomic D...	40	7.3
295	dbj|AB023032.1| Arabidopsis thaliana genomic DNA, chromosome 5, ...	40	7.3
296	dbj|AB005246.1| Arabidopsis thaliana genomic DNA, chromosome 5, ...	40	7.3
297	emb|AJ302017.1|PAB302017 Picea abies mRNA for putative plastidia...	40	7.3
298	dbj|AK071386.1| Oryza sativa (japonica cultivar-group) cDNA clon...	40	7.3
299	dbj|AK067644.1| Oryza sativa (japonica cultivar-group) cDNA clon...	40	7.3
300	emb|AL935145.12| Zebrafish DNA sequence from clone CH211-173B9 i...	40	7.3
301	dbj|AK062139.1| Oryza sativa (japonica cultivar-group) cDNA clon...	40	7.3
302	gb|AE015925.1| Chlamydophila caviae GPIC, complete genome	40	7.3
303	emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB1...	40	7.3
304	dbj|AP006428.1| Lotus japonicus genomic DNA, chromosome 5, clone...	40	7.3

---

>dbj|AK069811.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030D05, full
            insert sequence
          Length = 1579

 Score =  628 bits (317), Expect = e-177
 Identities = 468/517 (90%), Gaps = 1/517 (0%)
 Strand = Plus / Plus

                                                                        
Query: 25   ttcgtcgacaagggaccagctggagccgggatgctccatactgatgcataacaaggttct 84
            ||||||||||||| ||||||| ||||| || ||  |||| ||||||||||||||||||||
Sbjct: 520  ttcgtcgacaagg-accagctcgagccagggtgtgccattctgatgcataacaaggttct 578

                                                                        
Query: 85   ctcggtggtcggaattctgcaagatgaagttgatcctatggtttctgtcatgaaagttga 144
            ||| ||||| |||||| |||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 579  ctctgtggttggaattttgcaagatgaggttgaccctatggtttctgtcatgaaagttga 638

                                                                        
Query: 145  gaaggcacctttggagtcttatgctgacattggtggtttggatgcccaaattcaagagat 204
             ||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||||
Sbjct: 639  aaaggcacctttggagtcttatgcggacatcggtggtctggatgcccaaattcaagagat 698

                                                                        
Query: 205  caaagaggcagtggaacttccgttgacacatcctgagctatacgaggacattgggatcag 264
             |||||||| || || ||||| ||||| |||||||||||||| ||||||||||| || ||
Sbjct: 699  taaagaggctgttgagcttcccttgactcatcctgagctatatgaggacattggaataag 758

                                                                        
Query: 265  gcctccgaagggagtcatactatatggggaacctggaacagggaagactctacttgcaaa 324
            |||||| |||||||| ||| |||||||||||||||| ||||| || ||||||||||||||
Sbjct: 759  gcctcccaagggagtaatattatatggggaacctggcacaggcaaaactctacttgcaaa 818

                                                                        
Query: 325  ggctgttgccaattctacatcagcaacgttcttgcgtgttgttgggagtgagttgatcca 384
            ||| ||||| ||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 819  ggcggttgctaattctacatcagcaacatttttgcgtgttgttgggagtgagttgatcca 878

                                                                        
Query: 385  gaagtaccttggtgacggccctaagcttgtaagggaactgtttagggtggctgatgatct 444
             |||||||||||||| ||||| ||||||||||| ||| ||||||||||||||||||||||
Sbjct: 879  aaagtaccttggtgatggccccaagcttgtaagagaattgtttagggtggctgatgatct 938

                                                                        
Query: 445  gtctccttcaattgtcttcattgatgagattgatgcagttggaacaaagaggtatgatgc 504
             ||||| ||||||||||| ||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 939  ttctccgtcaattgtctttattgacgagattgatgcagtcggaacaaagaggtatgatgc 998

                                                 
Query: 505  tcattcaggtggtgagcgcgagattcagagaaccatg 541
            |||||| ||||| ||||| || |||||||||||||||
Sbjct: 999  tcattcgggtggagagcgtgaaattcagagaaccatg 1035

---

>dbj|AB037154.1| Oryza sativa (japonica cultivar-group) OsRPT2b mRNA for 26S
           proteasome regulatory particle triple-A ATPase
           subunit2b, complete cds
          Length = 1616

 Score =  628 bits (317), Expect = e-177
 Identities = 468/517 (90%), Gaps = 1/517 (0%)
 Strand = Plus / Plus

                                                                       
Query: 25  ttcgtcgacaagggaccagctggagccgggatgctccatactgatgcataacaaggttct 84
           ||||||||||||| ||||||| ||||| || ||  |||| ||||||||||||||||||||
Sbjct: 464 ttcgtcgacaagg-accagctcgagccagggtgtgccattctgatgcataacaaggttct 522

                                                                       
Query: 85  ctcggtggtcggaattctgcaagatgaagttgatcctatggtttctgtcatgaaagttga 144
           ||| ||||| |||||| |||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 523 ctctgtggttggaattttgcaagatgaggttgaccctatggtttctgtcatgaaagttga 582

                                                                       
Query: 145 gaaggcacctttggagtcttatgctgacattggtggtttggatgcccaaattcaagagat 204
            ||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||||
Sbjct: 583 aaaggcacctttggagtcttatgcggacatcggtggtctggatgcccaaattcaagagat 642

                                                                       
Query: 205 caaagaggcagtggaacttccgttgacacatcctgagctatacgaggacattgggatcag 264
            |||||||| || || ||||| ||||| |||||||||||||| ||||||||||| || ||
Sbjct: 643 taaagaggctgttgagcttcccttgactcatcctgagctatatgaggacattggaataag 702

                                                                       
Query: 265 gcctccgaagggagtcatactatatggggaacctggaacagggaagactctacttgcaaa 324
           |||||| |||||||| ||| |||||||||||||||| ||||| || ||||||||||||||
Sbjct: 703 gcctcccaagggagtaatattatatggggaacctggcacaggcaaaactctacttgcaaa 762

                                                                       
Query: 325 ggctgttgccaattctacatcagcaacgttcttgcgtgttgttgggagtgagttgatcca 384
           ||| ||||| ||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 763 ggcggttgctaattctacatcagcaacatttttgcgtgttgttgggagtgagttgatcca 822

                                                                       
Query: 385 gaagtaccttggtgacggccctaagcttgtaagggaactgtttagggtggctgatgatct 444
            |||||||||||||| ||||| ||||||||||| ||| ||||||||||||||||||||||
Sbjct: 823 aaagtaccttggtgatggccccaagcttgtaagagaattgtttagggtggctgatgatct 882

                                                                       
Query: 445 gtctccttcaattgtcttcattgatgagattgatgcagttggaacaaagaggtatgatgc 504
            ||||| ||||||||||| ||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 883 ttctccgtcaattgtctttattgacgagattgatgcagtcggaacaaagaggtatgatgc 942

                                                
Query: 505 tcattcaggtggtgagcgcgagattcagagaaccatg 541
           |||||| ||||| ||||| || |||||||||||||||
Sbjct: 943 tcattcgggtggagagcgtgaaattcagagaaccatg 979

---

>ref|NM_185558.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1597

 Score =  454 bits (229), Expect = e-124
 Identities = 443/513 (86%), Gaps = 1/513 (0%)
 Strand = Plus / Plus

                                                                        
Query: 25   ttcgtcgacaagggaccagctggagccgggatgctccatactgatgcataacaaggttct 84
            ||||||||||||| ||||||| ||||| || |||||||| || ||||| |||||||||||
Sbjct: 528  ttcgtcgacaagg-accagctcgagcccggctgctccatcctcatgcacaacaaggttct 586

                                                                        
Query: 85   ctcggtggtcggaattctgcaagatgaagttgatcctatggtttctgtcatgaaagttga 144
             || |||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 587  gtctgtggtcggaattttgcaagatgaagttgatcctatggtttctgtgatgaaagtgga 646

                                                                        
Query: 145  gaaggcacctttggagtcttatgctgacattggtggtttggatgcccaaattcaagagat 204
            ||| || ||  |||| || |||||||||||||||||  | ||||| || || ||||| ||
Sbjct: 647  gaaagctccgctggaatcctatgctgacattggtgggctagatgctcagatccaagaaat 706

                                                                        
Query: 205  caaagaggcagtggaacttccgttgacacatcctgagctatacgaggacattgggatcag 264
            |||||||||||| || ||||| ||||| |||||||||||||| || |||||||| |||||
Sbjct: 707  caaagaggcagttgagcttcctttgacccatcctgagctatatgaagacattggcatcag 766

                                                                        
Query: 265  gcctccgaagggagtcatactatatggggaacctggaacagggaagactctacttgcaaa 324
            ||| || |||||||||||| |||| || |||||||||||||||||||| |||||||| ||
Sbjct: 767  gccacccaagggagtcatattatacggagaacctggaacagggaagacactacttgccaa 826

                                                                        
Query: 325  ggctgttgccaattctacatcagcaacgttcttgcgtgttgttgggagtgagttgatcca 384
            ||||||||| || || ||||| ||||| ||||||||||||||||| |||||| | || ||
Sbjct: 827  ggctgttgctaactccacatccgcaactttcttgcgtgttgttggaagtgagcttattca 886

                                                                        
Query: 385  gaagtaccttggtgacggccctaagcttgtaagggaactgtttagggtggctgatgatct 444
             ||||| |||||||| || || || || || ||||||||||| || || |||||||| ||
Sbjct: 887  aaagtatcttggtgatggtcccaaactagtcagggaactgttcagagttgctgatgagct 946

                                                                        
Query: 445  gtctccttcaattgtcttcattgatgagattgatgcagttggaacaaagaggtatgatgc 504
             ||||| ||||| ||||| || |||||||||||||| ||||||||||||||||| |||||
Sbjct: 947  ttctccctcaatagtctttatcgatgagattgatgctgttggaacaaagaggtacgatgc 1006

                                             
Query: 505  tcattcaggtggtgagcgcgagattcagagaac 537
            ||||||||| || ||||| ||||||||||||||
Sbjct: 1007 tcattcaggaggggagcgtgagattcagagaac 1039

---

>ref|XM_507415.1| PREDICTED Oryza sativa (japonica cultivar-group), P0034A04.112 mRNA
          Length = 1599

 Score =  454 bits (229), Expect = e-124
 Identities = 443/513 (86%), Gaps = 1/513 (0%)
 Strand = Plus / Plus

                                                                        
Query: 25   ttcgtcgacaagggaccagctggagccgggatgctccatactgatgcataacaaggttct 84
            ||||||||||||| ||||||| ||||| || |||||||| || ||||| |||||||||||
Sbjct: 527  ttcgtcgacaagg-accagctcgagcccggctgctccatcctcatgcacaacaaggttct 585

                                                                        
Query: 85   ctcggtggtcggaattctgcaagatgaagttgatcctatggtttctgtcatgaaagttga 144
             || |||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 586  gtctgtggtcggaattttgcaagatgaagttgatcctatggtttctgtgatgaaagtgga 645

                                                                        
Query: 145  gaaggcacctttggagtcttatgctgacattggtggtttggatgcccaaattcaagagat 204
            ||| || ||  |||| || |||||||||||||||||  | ||||| || || ||||| ||
Sbjct: 646  gaaagctccgctggaatcctatgctgacattggtgggctagatgctcagatccaagaaat 705

                                                                        
Query: 205  caaagaggcagtggaacttccgttgacacatcctgagctatacgaggacattgggatcag 264
            |||||||||||| || ||||| ||||| |||||||||||||| || |||||||| |||||
Sbjct: 706  caaagaggcagttgagcttcctttgacccatcctgagctatatgaagacattggcatcag 765

                                                                        
Query: 265  gcctccgaagggagtcatactatatggggaacctggaacagggaagactctacttgcaaa 324
            ||| || |||||||||||| |||| || |||||||||||||||||||| |||||||| ||
Sbjct: 766  gccacccaagggagtcatattatacggagaacctggaacagggaagacactacttgccaa 825

                                                                        
Query: 325  ggctgttgccaattctacatcagcaacgttcttgcgtgttgttgggagtgagttgatcca 384
            ||||||||| || || ||||| ||||| ||||||||||||||||| |||||| | || ||
Sbjct: 826  ggctgttgctaactccacatccgcaactttcttgcgtgttgttggaagtgagcttattca 885

                                                                        
Query: 385  gaagtaccttggtgacggccctaagcttgtaagggaactgtttagggtggctgatgatct 444
             ||||| |||||||| || || || || || ||||||||||| || || |||||||| ||
Sbjct: 886  aaagtatcttggtgatggtcccaaactagtcagggaactgttcagagttgctgatgagct 945

                                                                        
Query: 445  gtctccttcaattgtcttcattgatgagattgatgcagttggaacaaagaggtatgatgc 504
             ||||| ||||| ||||| || |||||||||||||| ||||||||||||||||| |||||
Sbjct: 946  ttctccctcaatagtctttatcgatgagattgatgctgttggaacaaagaggtacgatgc 1005

                                             
Query: 505  tcattcaggtggtgagcgcgagattcagagaac 537
            ||||||||| || ||||| ||||||||||||||
Sbjct: 1006 tcattcaggaggggagcgtgagattcagagaac 1038

---

>ref|XM_506590.2| PREDICTED Oryza sativa (japonica cultivar-group), P0034A04.112 mRNA
          Length = 1615

 Score =  454 bits (229), Expect = e-124
 Identities = 443/513 (86%), Gaps = 1/513 (0%)
 Strand = Plus / Plus

                                                                        
Query: 25   ttcgtcgacaagggaccagctggagccgggatgctccatactgatgcataacaaggttct 84
            ||||||||||||| ||||||| ||||| || |||||||| || ||||| |||||||||||
Sbjct: 527  ttcgtcgacaagg-accagctcgagcccggctgctccatcctcatgcacaacaaggttct 585

                                                                        
Query: 85   ctcggtggtcggaattctgcaagatgaagttgatcctatggtttctgtcatgaaagttga 144
             || |||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 586  gtctgtggtcggaattttgcaagatgaagttgatcctatggtttctgtgatgaaagtgga 645

                                                                        
Query: 145  gaaggcacctttggagtcttatgctgacattggtggtttggatgcccaaattcaagagat 204
            ||| || ||  |||| || |||||||||||||||||  | ||||| || || ||||| ||
Sbjct: 646  gaaagctccgctggaatcctatgctgacattggtgggctagatgctcagatccaagaaat 705

                                                                        
Query: 205  caaagaggcagtggaacttccgttgacacatcctgagctatacgaggacattgggatcag 264
            |||||||||||| || ||||| ||||| |||||||||||||| || |||||||| |||||
Sbjct: 706  caaagaggcagttgagcttcctttgacccatcctgagctatatgaagacattggcatcag 765

                                                                        
Query: 265  gcctccgaagggagtcatactatatggggaacctggaacagggaagactctacttgcaaa 324
            ||| || |||||||||||| |||| || |||||||||||||||||||| |||||||| ||
Sbjct: 766  gccacccaagggagtcatattatacggagaacctggaacagggaagacactacttgccaa 825

                                                                        
Query: 325  ggctgttgccaattctacatcagcaacgttcttgcgtgttgttgggagtgagttgatcca 384
            ||||||||| || || ||||| ||||| ||||||||||||||||| |||||| | || ||
Sbjct: 826  ggctgttgctaactccacatccgcaactttcttgcgtgttgttggaagtgagcttattca 885

                                                                        
Query: 385  gaagtaccttggtgacggccctaagcttgtaagggaactgtttagggtggctgatgatct 444
             ||||| |||||||| || || || || || ||||||||||| || || |||||||| ||
Sbjct: 886  aaagtatcttggtgatggtcccaaactagtcagggaactgttcagagttgctgatgagct 945

                                                                        
Query: 445  gtctccttcaattgtcttcattgatgagattgatgcagttggaacaaagaggtatgatgc 504
             ||||| ||||| ||||| || |||||||||||||| ||||||||||||||||| |||||
Sbjct: 946  ttctccctcaatagtctttatcgatgagattgatgctgttggaacaaagaggtacgatgc 1005

                                             
Query: 505  tcattcaggtggtgagcgcgagattcagagaac 537
            ||||||||| || ||||| ||||||||||||||
Sbjct: 1006 tcattcaggaggggagcgtgagattcagagaac 1038

---

>dbj|AK105861.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-A02, full
            insert sequence
          Length = 1599

 Score =  454 bits (229), Expect = e-124
 Identities = 443/513 (86%), Gaps = 1/513 (0%)
 Strand = Plus / Plus

                                                                        
Query: 25   ttcgtcgacaagggaccagctggagccgggatgctccatactgatgcataacaaggttct 84
            ||||||||||||| ||||||| ||||| || |||||||| || ||||| |||||||||||
Sbjct: 527  ttcgtcgacaagg-accagctcgagcccggctgctccatcctcatgcacaacaaggttct 585

                                                                        
Query: 85   ctcggtggtcggaattctgcaagatgaagttgatcctatggtttctgtcatgaaagttga 144
             || |||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 586  gtctgtggtcggaattttgcaagatgaagttgatcctatggtttctgtgatgaaagtgga 645

                                                                        
Query: 145  gaaggcacctttggagtcttatgctgacattggtggtttggatgcccaaattcaagagat 204
            ||| || ||  |||| || |||||||||||||||||  | ||||| || || ||||| ||
Sbjct: 646  gaaagctccgctggaatcctatgctgacattggtgggctagatgctcagatccaagaaat 705

                                                                        
Query: 205  caaagaggcagtggaacttccgttgacacatcctgagctatacgaggacattgggatcag 264
            |||||||||||| || ||||| ||||| |||||||||||||| || |||||||| |||||
Sbjct: 706  caaagaggcagttgagcttcctttgacccatcctgagctatatgaagacattggcatcag 765

                                                                        
Query: 265  gcctccgaagggagtcatactatatggggaacctggaacagggaagactctacttgcaaa 324
            ||| || |||||||||||| |||| || |||||||||||||||||||| |||||||| ||
Sbjct: 766  gccacccaagggagtcatattatacggagaacctggaacagggaagacactacttgccaa 825

                                                                        
Query: 325  ggctgttgccaattctacatcagcaacgttcttgcgtgttgttgggagtgagttgatcca 384
            ||||||||| || || ||||| ||||| ||||||||||||||||| |||||| | || ||
Sbjct: 826  ggctgttgctaactccacatccgcaactttcttgcgtgttgttggaagtgagcttattca 885

                                                                        
Query: 385  gaagtaccttggtgacggccctaagcttgtaagggaactgtttagggtggctgatgatct 444
             ||||| |||||||| || || || || || ||||||||||| || || |||||||| ||
Sbjct: 886  aaagtatcttggtgatggtcccaaactagtcagggaactgttcagagttgctgatgagct 945

                                                                        
Query: 445  gtctccttcaattgtcttcattgatgagattgatgcagttggaacaaagaggtatgatgc 504
             ||||| ||||| ||||| || |||||||||||||| ||||||||||||||||| |||||
Sbjct: 946  ttctccctcaatagtctttatcgatgagattgatgctgttggaacaaagaggtacgatgc 1005

                                             
Query: 505  tcattcaggtggtgagcgcgagattcagagaac 537
            ||||||||| || ||||| ||||||||||||||
Sbjct: 1006 tcattcaggaggggagcgtgagattcagagaac 1038

---

>dbj|AK099264.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023018C04, full
            insert sequence
          Length = 1597

 Score =  454 bits (229), Expect = e-124
 Identities = 443/513 (86%), Gaps = 1/513 (0%)
 Strand = Plus / Plus

                                                                        
Query: 25   ttcgtcgacaagggaccagctggagccgggatgctccatactgatgcataacaaggttct 84
            ||||||||||||| ||||||| ||||| || |||||||| || ||||| |||||||||||
Sbjct: 528  ttcgtcgacaagg-accagctcgagcccggctgctccatcctcatgcacaacaaggttct 586

                                                                        
Query: 85   ctcggtggtcggaattctgcaagatgaagttgatcctatggtttctgtcatgaaagttga 144
             || |||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 587  gtctgtggtcggaattttgcaagatgaagttgatcctatggtttctgtgatgaaagtgga 646

                                                                        
Query: 145  gaaggcacctttggagtcttatgctgacattggtggtttggatgcccaaattcaagagat 204
            ||| || ||  |||| || |||||||||||||||||  | ||||| || || ||||| ||
Sbjct: 647  gaaagctccgctggaatcctatgctgacattggtgggctagatgctcagatccaagaaat 706

                                                                        
Query: 205  caaagaggcagtggaacttccgttgacacatcctgagctatacgaggacattgggatcag 264
            |||||||||||| || ||||| ||||| |||||||||||||| || |||||||| |||||
Sbjct: 707  caaagaggcagttgagcttcctttgacccatcctgagctatatgaagacattggcatcag 766

                                                                        
Query: 265  gcctccgaagggagtcatactatatggggaacctggaacagggaagactctacttgcaaa 324
            ||| || |||||||||||| |||| || |||||||||||||||||||| |||||||| ||
Sbjct: 767  gccacccaagggagtcatattatacggagaacctggaacagggaagacactacttgccaa 826

                                                                        
Query: 325  ggctgttgccaattctacatcagcaacgttcttgcgtgttgttgggagtgagttgatcca 384
            ||||||||| || || ||||| ||||| ||||||||||||||||| |||||| | || ||
Sbjct: 827  ggctgttgctaactccacatccgcaactttcttgcgtgttgttggaagtgagcttattca 886

                                                                        
Query: 385  gaagtaccttggtgacggccctaagcttgtaagggaactgtttagggtggctgatgatct 444
             ||||| |||||||| || || || || || ||||||||||| || || |||||||| ||
Sbjct: 887  aaagtatcttggtgatggtcccaaactagtcagggaactgttcagagttgctgatgagct 946

                                                                        
Query: 445  gtctccttcaattgtcttcattgatgagattgatgcagttggaacaaagaggtatgatgc 504
             ||||| ||||| ||||| || |||||||||||||| ||||||||||||||||| |||||
Sbjct: 947  ttctccctcaatagtctttatcgatgagattgatgctgttggaacaaagaggtacgatgc 1006

                                             
Query: 505  tcattcaggtggtgagcgcgagattcagagaac 537
            ||||||||| || ||||| ||||||||||||||
Sbjct: 1007 tcattcaggaggggagcgtgagattcagagaac 1039

---

>dbj|AK058311.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H11, full
            insert sequence
          Length = 1615

 Score =  454 bits (229), Expect = e-124
 Identities = 443/513 (86%), Gaps = 1/513 (0%)
 Strand = Plus / Plus

                                                                        
Query: 25   ttcgtcgacaagggaccagctggagccgggatgctccatactgatgcataacaaggttct 84
            ||||||||||||| ||||||| ||||| || |||||||| || ||||| |||||||||||
Sbjct: 527  ttcgtcgacaagg-accagctcgagcccggctgctccatcctcatgcacaacaaggttct 585

                                                                        
Query: 85   ctcggtggtcggaattctgcaagatgaagttgatcctatggtttctgtcatgaaagttga 144
             || |||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 586  gtctgtggtcggaattttgcaagatgaagttgatcctatggtttctgtgatgaaagtgga 645

                                                                        
Query: 145  gaaggcacctttggagtcttatgctgacattggtggtttggatgcccaaattcaagagat 204
            ||| || ||  |||| || |||||||||||||||||  | ||||| || || ||||| ||
Sbjct: 646  gaaagctccgctggaatcctatgctgacattggtgggctagatgctcagatccaagaaat 705

                                                                        
Query: 205  caaagaggcagtggaacttccgttgacacatcctgagctatacgaggacattgggatcag 264
            |||||||||||| || ||||| ||||| |||||||||||||| || |||||||| |||||
Sbjct: 706  caaagaggcagttgagcttcctttgacccatcctgagctatatgaagacattggcatcag 765

                                                                        
Query: 265  gcctccgaagggagtcatactatatggggaacctggaacagggaagactctacttgcaaa 324
            ||| || |||||||||||| |||| || |||||||||||||||||||| |||||||| ||
Sbjct: 766  gccacccaagggagtcatattatacggagaacctggaacagggaagacactacttgccaa 825

                                                                        
Query: 325  ggctgttgccaattctacatcagcaacgttcttgcgtgttgttgggagtgagttgatcca 384
            ||||||||| || || ||||| ||||| ||||||||||||||||| |||||| | || ||
Sbjct: 826  ggctgttgctaactccacatccgcaactttcttgcgtgttgttggaagtgagcttattca 885

                                                                        
Query: 385  gaagtaccttggtgacggccctaagcttgtaagggaactgtttagggtggctgatgatct 444
             ||||| |||||||| || || || || || ||||||||||| || || |||||||| ||
Sbjct: 886  aaagtatcttggtgatggtcccaaactagtcagggaactgttcagagttgctgatgagct 945

                                                                        
Query: 445  gtctccttcaattgtcttcattgatgagattgatgcagttggaacaaagaggtatgatgc 504
             ||||| ||||| ||||| || |||||||||||||| ||||||||||||||||| |||||
Sbjct: 946  ttctccctcaatagtctttatcgatgagattgatgctgttggaacaaagaggtacgatgc 1005

                                             
Query: 505  tcattcaggtggtgagcgcgagattcagagaac 537
            ||||||||| || ||||| ||||||||||||||
Sbjct: 1006 tcattcaggaggggagcgtgagattcagagaac 1038

---

>dbj|D17789.1|RICHTBP2 Oryza sativa (japonica cultivar-group) mRNA for homologue of Tat
            binding protein, complete cds
          Length = 1609

 Score =  454 bits (229), Expect = e-124
 Identities = 443/513 (86%), Gaps = 1/513 (0%)
 Strand = Plus / Plus

                                                                        
Query: 25   ttcgtcgacaagggaccagctggagccgggatgctccatactgatgcataacaaggttct 84
            ||||||||||||| ||||||| ||||| || |||||||| || ||||| |||||||||||
Sbjct: 495  ttcgtcgacaagg-accagctcgagcccggctgctccatcctcatgcacaacaaggttct 553

                                                                        
Query: 85   ctcggtggtcggaattctgcaagatgaagttgatcctatggtttctgtcatgaaagttga 144
             || |||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 554  gtctgtggtcggaattttgcaagatgaagttgatcctatggtttctgtgatgaaagtgga 613

                                                                        
Query: 145  gaaggcacctttggagtcttatgctgacattggtggtttggatgcccaaattcaagagat 204
            ||| || ||  |||| || |||||||||||||||||  | ||||| || || ||||| ||
Sbjct: 614  gaaagctccgctggaatcctatgctgacattggtgggctagatgctcagatccaagaaat 673

                                                                        
Query: 205  caaagaggcagtggaacttccgttgacacatcctgagctatacgaggacattgggatcag 264
            |||||||||||| || ||||| ||||| |||||||||||||| || |||||||| |||||
Sbjct: 674  caaagaggcagttgagcttcctttgacccatcctgagctatatgaagacattggcatcag 733

                                                                        
Query: 265  gcctccgaagggagtcatactatatggggaacctggaacagggaagactctacttgcaaa 324
            ||| || |||||||||||| |||| || |||||||||||||||||||| |||||||| ||
Sbjct: 734  gccacccaagggagtcatattatacggagaacctggaacagggaagacactacttgccaa 793

                                                                        
Query: 325  ggctgttgccaattctacatcagcaacgttcttgcgtgttgttgggagtgagttgatcca 384
            ||||||||| || || ||||| ||||| ||||||||||||||||| |||||| | || ||
Sbjct: 794  ggctgttgctaactccacatccgcaactttcttgcgtgttgttggaagtgagcttattca 853

                                                                        
Query: 385  gaagtaccttggtgacggccctaagcttgtaagggaactgtttagggtggctgatgatct 444
             ||||| |||||||| || || || || || ||||||||||| || || |||||||| ||
Sbjct: 854  aaagtatcttggtgatggtcccaaactagtcagggaactgttcagagttgctgatgagct 913

                                                                        
Query: 445  gtctccttcaattgtcttcattgatgagattgatgcagttggaacaaagaggtatgatgc 504
             |||||||| || ||||| || |||||||||||||| ||||||||||||||||| |||||
Sbjct: 914  ttctccttcgatagtctttatcgatgagattgatgctgttggaacaaagaggtacgatgc 973

                                             
Query: 505  tcattcaggtggtgagcgcgagattcagagaac 537
            ||||||||| || ||||| ||||||||||||||
Sbjct: 974  tcattcaggaggggagcgtgagattcagagaac 1006

---

>gb|AY105631.1| Zea mays PCO101908 mRNA sequence
          Length = 1272

 Score =  430 bits (217), Expect = e-117
 Identities = 430/501 (85%)
 Strand = Plus / Plus

                                                                       
Query: 37  ggaccagctggagccgggatgctccatactgatgcataacaaggttctctcggtggtcgg 96
           ||||||||| |||||||| |||||||| || ||||| |||||||||||||| ||||| ||
Sbjct: 91  ggaccagctcgagccggggtgctccatcctcatgcacaacaaggttctctctgtggttgg 150

                                                                       
Query: 97  aattctgcaagatgaagttgatcctatggtttctgtcatgaaagttgagaaggcaccttt 156
            ||  ||||||||||||||||||||||||| ||||| |||||||||||||| || |||||
Sbjct: 151 tatattgcaagatgaagttgatcctatggtatctgtgatgaaagttgagaaagcgccttt 210

                                                                       
Query: 157 ggagtcttatgctgacattggtggtttggatgcccaaattcaagagatcaaagaggcagt 216
           ||| ||||||||||||||||||||  ||||||| || |||||||| || |||||||||||
Sbjct: 211 ggaatcttatgctgacattggtggactggatgctcagattcaagaaattaaagaggcagt 270

                                                                       
Query: 217 ggaacttccgttgacacatcctgagctatacgaggacattgggatcaggcctccgaaggg 276
            || ||||| ||||| || |||||||| || || |||||||| || |||||||| |||||
Sbjct: 271 tgagcttcccttgactcaccctgagctgtatgaagacattggtattaggcctcccaaggg 330

                                                                       
Query: 277 agtcatactatatggggaacctggaacagggaagactctacttgcaaaggctgttgccaa 336
           ||||||| ||||||| |||||||||||||| || ||||| ||||| |||||||| || ||
Sbjct: 331 agtcatattatatggagaacctggaacaggaaaaactcttcttgccaaggctgtggctaa 390

                                                                       
Query: 337 ttctacatcagcaacgttcttgcgtgttgttgggagtgagttgatccagaagtaccttgg 396
            || ||||| || || ||||||||||||||||| |||||  | || || |||||||||||
Sbjct: 391 ctcaacatctgcgactttcttgcgtgttgttggtagtgaactcattcaaaagtaccttgg 450

                                                                       
Query: 397 tgacggccctaagcttgtaagggaactgtttagggtggctgatgatctgtctccttcaat 456
            || || || || || ||  | ||| ||||||||||||||||||| || ||||| |||||
Sbjct: 451 ggatggtcccaaactagtccgagaattgtttagggtggctgatgaactttctccctcaat 510

                                                                       
Query: 457 tgtcttcattgatgagattgatgcagttggaacaaagaggtatgatgctcattcaggtgg 516
           |||||| |||||||||||||| || |||||||||||||||||||||||||||||||| ||
Sbjct: 511 tgtctttattgatgagattgacgctgttggaacaaagaggtatgatgctcattcaggagg 570

                                
Query: 517 tgagcgcgagattcagagaac 537
            ||||| |||||||| |||||
Sbjct: 571 agagcgtgagattcaaagaac 591

---

>dbj|AK070759.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023065N19, full
           insert sequence
          Length = 947

 Score =  307 bits (155), Expect = 2e-80
 Identities = 290/335 (86%)
 Strand = Plus / Plus

                                                                       
Query: 203 atcaaagaggcagtggaacttccgttgacacatcctgagctatacgaggacattgggatc 262
           |||||||||||||| || ||||| ||||| |||||||||||||| || |||||||| |||
Sbjct: 5   atcaaagaggcagttgagcttcctttgacccatcctgagctatatgaagacattggcatc 64

                                                                       
Query: 263 aggcctccgaagggagtcatactatatggggaacctggaacagggaagactctacttgca 322
           ||||| || |||||||||||| |||| || |||||||||||||||||||| |||||||| 
Sbjct: 65  aggccacccaagggagtcatattatacggagaacctggaacagggaagacactacttgcc 124

                                                                       
Query: 323 aaggctgttgccaattctacatcagcaacgttcttgcgtgttgttgggagtgagttgatc 382
           ||||||||||| || || ||||| ||||| ||||||||||||||||| |||||| | || 
Sbjct: 125 aaggctgttgctaactccacatccgcaactttcttgcgtgttgttggaagtgagcttatt 184

                                                                       
Query: 383 cagaagtaccttggtgacggccctaagcttgtaagggaactgtttagggtggctgatgat 442
           || ||||| |||||||| || || || || || ||||||||||| || || |||||||| 
Sbjct: 185 caaaagtatcttggtgatggtcccaaactagtcagggaactgttcagagttgctgatgag 244

                                                                       
Query: 443 ctgtctccttcaattgtcttcattgatgagattgatgcagttggaacaaagaggtatgat 502
           || ||||| ||||| ||||| || |||||||||||||| ||||||||||||||||| |||
Sbjct: 245 ctttctccctcaatagtctttatcgatgagattgatgctgttggaacaaagaggtacgat 304

                                              
Query: 503 gctcattcaggtggtgagcgcgagattcagagaac 537
           ||||||||||| || ||||| ||||||||||||||
Sbjct: 305 gctcattcaggaggggagcgtgagattcagagaac 339

---

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  303 bits (153), Expect = 3e-79
 Identities = 225/249 (90%)
 Strand = Plus / Plus

                                                                            
Query: 78       aggttctctcggtggtcggaattctgcaagatgaagttgatcctatggtttctgtcatga 137
                |||||||||| ||||| |||||| |||||||||| ||||| |||||||||||||||||||
Sbjct: 10436459 aggttctctctgtggttggaattttgcaagatgaggttgaccctatggtttctgtcatga 10436518

                                                                            
Query: 138      aagttgagaaggcacctttggagtcttatgctgacattggtggtttggatgcccaaattc 197
                ||||||| ||||||||||||||||||||||| ||||| |||||| |||||||||||||||
Sbjct: 10436519 aagttgaaaaggcacctttggagtcttatgcggacatcggtggtctggatgcccaaattc 10436578

                                                                            
Query: 198      aagagatcaaagaggcagtggaacttccgttgacacatcctgagctatacgaggacattg 257
                ||||||| |||||||| || || ||||| ||||| |||||||||||||| ||||||||||
Sbjct: 10436579 aagagattaaagaggctgttgagcttcccttgactcatcctgagctatatgaggacattg 10436638

                                                                            
Query: 258      ggatcaggcctccgaagggagtcatactatatggggaacctggaacagggaagactctac 317
                | || |||||||| |||||||| ||| |||||||||||||||| ||||| || |||||||
Sbjct: 10436639 gaataaggcctcccaagggagtaatattatatggggaacctggcacaggcaaaactctac 10436698

                         
Query: 318      ttgcaaagg 326
                |||||||||
Sbjct: 10436699 ttgcaaagg 10436707



 Score =  236 bits (119), Expect = 6e-59
 Identities = 161/175 (92%)
 Strand = Plus / Plus

                                                                            
Query: 324      aggctgttgccaattctacatcagcaacgttcttgcgtgttgttgggagtgagttgatcc 383
                |||| ||||| ||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 10436917 aggcggttgctaattctacatcagcaacatttttgcgtgttgttgggagtgagttgatcc 10436976

                                                                            
Query: 384      agaagtaccttggtgacggccctaagcttgtaagggaactgtttagggtggctgatgatc 443
                | |||||||||||||| ||||| ||||||||||| ||| |||||||||||||||||||||
Sbjct: 10436977 aaaagtaccttggtgatggccccaagcttgtaagagaattgtttagggtggctgatgatc 10437036

                                                                       
Query: 444      tgtctccttcaattgtcttcattgatgagattgatgcagttggaacaaagaggta 498
                | ||||| ||||||||||| ||||| |||||||||||||| ||||||||||||||
Sbjct: 10437037 tttctccgtcaattgtctttattgacgagattgatgcagtcggaacaaagaggta 10437091



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                                
Query: 494      aggtatgatgctcattcaggtggtgagcgcgagattcagagaaccatg 541
                ||||||||||||||||| ||||| ||||| || |||||||||||||||
Sbjct: 10437220 aggtatgatgctcattcgggtggagagcgtgaaattcagagaaccatg 10437267



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 50/57 (87%), Gaps = 1/57 (1%)
 Strand = Plus / Plus

                                                                         
Query: 25       ttcgtcgacaagggaccagctggagccgggatgctccatactgatgcataacaaggt 81
                ||||||||||||| ||||||| ||||| || ||  |||| |||||||||||||||||
Sbjct: 10434955 ttcgtcgacaagg-accagctcgagccagggtgtgccattctgatgcataacaaggt 10435010

---

>gb|AC137931.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0039F10, complete sequence
          Length = 139714

 Score =  303 bits (153), Expect = 3e-79
 Identities = 225/249 (90%)
 Strand = Plus / Plus

                                                                         
Query: 78    aggttctctcggtggtcggaattctgcaagatgaagttgatcctatggtttctgtcatga 137
             |||||||||| ||||| |||||| |||||||||| ||||| |||||||||||||||||||
Sbjct: 93012 aggttctctctgtggttggaattttgcaagatgaggttgaccctatggtttctgtcatga 93071

                                                                         
Query: 138   aagttgagaaggcacctttggagtcttatgctgacattggtggtttggatgcccaaattc 197
             ||||||| ||||||||||||||||||||||| ||||| |||||| |||||||||||||||
Sbjct: 93072 aagttgaaaaggcacctttggagtcttatgcggacatcggtggtctggatgcccaaattc 93131

                                                                         
Query: 198   aagagatcaaagaggcagtggaacttccgttgacacatcctgagctatacgaggacattg 257
             ||||||| |||||||| || || ||||| ||||| |||||||||||||| ||||||||||
Sbjct: 93132 aagagattaaagaggctgttgagcttcccttgactcatcctgagctatatgaggacattg 93191

                                                                         
Query: 258   ggatcaggcctccgaagggagtcatactatatggggaacctggaacagggaagactctac 317
             | || |||||||| |||||||| ||| |||||||||||||||| ||||| || |||||||
Sbjct: 93192 gaataaggcctcccaagggagtaatattatatggggaacctggcacaggcaaaactctac 93251

                      
Query: 318   ttgcaaagg 326
             |||||||||
Sbjct: 93252 ttgcaaagg 93260



 Score =  236 bits (119), Expect = 6e-59
 Identities = 161/175 (92%)
 Strand = Plus / Plus

                                                                         
Query: 324   aggctgttgccaattctacatcagcaacgttcttgcgtgttgttgggagtgagttgatcc 383
             |||| ||||| ||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 93470 aggcggttgctaattctacatcagcaacatttttgcgtgttgttgggagtgagttgatcc 93529

                                                                         
Query: 384   agaagtaccttggtgacggccctaagcttgtaagggaactgtttagggtggctgatgatc 443
             | |||||||||||||| ||||| ||||||||||| ||| |||||||||||||||||||||
Sbjct: 93530 aaaagtaccttggtgatggccccaagcttgtaagagaattgtttagggtggctgatgatc 93589

                                                                    
Query: 444   tgtctccttcaattgtcttcattgatgagattgatgcagttggaacaaagaggta 498
             | ||||| ||||||||||| ||||| |||||||||||||| ||||||||||||||
Sbjct: 93590 tttctccgtcaattgtctttattgacgagattgatgcagtcggaacaaagaggta 93644



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                             
Query: 494   aggtatgatgctcattcaggtggtgagcgcgagattcagagaaccatg 541
             ||||||||||||||||| ||||| ||||| || |||||||||||||||
Sbjct: 93773 aggtatgatgctcattcgggtggagagcgtgaaattcagagaaccatg 93820



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 50/57 (87%), Gaps = 1/57 (1%)
 Strand = Plus / Plus

                                                                      
Query: 25    ttcgtcgacaagggaccagctggagccgggatgctccatactgatgcataacaaggt 81
             ||||||||||||| ||||||| ||||| || ||  |||| |||||||||||||||||
Sbjct: 91508 ttcgtcgacaagg-accagctcgagccagggtgtgccattctgatgcataacaaggt 91563

---

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  303 bits (153), Expect = 3e-79
 Identities = 225/249 (90%)
 Strand = Plus / Plus

                                                                            
Query: 78       aggttctctcggtggtcggaattctgcaagatgaagttgatcctatggtttctgtcatga 137
                |||||||||| ||||| |||||| |||||||||| ||||| |||||||||||||||||||
Sbjct: 10434560 aggttctctctgtggttggaattttgcaagatgaggttgaccctatggtttctgtcatga 10434619

                                                                            
Query: 138      aagttgagaaggcacctttggagtcttatgctgacattggtggtttggatgcccaaattc 197
                ||||||| ||||||||||||||||||||||| ||||| |||||| |||||||||||||||
Sbjct: 10434620 aagttgaaaaggcacctttggagtcttatgcggacatcggtggtctggatgcccaaattc 10434679

                                                                            
Query: 198      aagagatcaaagaggcagtggaacttccgttgacacatcctgagctatacgaggacattg 257
                ||||||| |||||||| || || ||||| ||||| |||||||||||||| ||||||||||
Sbjct: 10434680 aagagattaaagaggctgttgagcttcccttgactcatcctgagctatatgaggacattg 10434739

                                                                            
Query: 258      ggatcaggcctccgaagggagtcatactatatggggaacctggaacagggaagactctac 317
                | || |||||||| |||||||| ||| |||||||||||||||| ||||| || |||||||
Sbjct: 10434740 gaataaggcctcccaagggagtaatattatatggggaacctggcacaggcaaaactctac 10434799

                         
Query: 318      ttgcaaagg 326
                |||||||||
Sbjct: 10434800 ttgcaaagg 10434808



 Score =  236 bits (119), Expect = 6e-59
 Identities = 161/175 (92%)
 Strand = Plus / Plus

                                                                            
Query: 324      aggctgttgccaattctacatcagcaacgttcttgcgtgttgttgggagtgagttgatcc 383
                |||| ||||| ||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 10435018 aggcggttgctaattctacatcagcaacatttttgcgtgttgttgggagtgagttgatcc 10435077

                                                                            
Query: 384      agaagtaccttggtgacggccctaagcttgtaagggaactgtttagggtggctgatgatc 443
                | |||||||||||||| ||||| ||||||||||| ||| |||||||||||||||||||||
Sbjct: 10435078 aaaagtaccttggtgatggccccaagcttgtaagagaattgtttagggtggctgatgatc 10435137

                                                                       
Query: 444      tgtctccttcaattgtcttcattgatgagattgatgcagttggaacaaagaggta 498
                | ||||| ||||||||||| ||||| |||||||||||||| ||||||||||||||
Sbjct: 10435138 tttctccgtcaattgtctttattgacgagattgatgcagtcggaacaaagaggta 10435192



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                                
Query: 494      aggtatgatgctcattcaggtggtgagcgcgagattcagagaaccatg 541
                ||||||||||||||||| ||||| ||||| || |||||||||||||||
Sbjct: 10435321 aggtatgatgctcattcgggtggagagcgtgaaattcagagaaccatg 10435368



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 50/57 (87%), Gaps = 1/57 (1%)
 Strand = Plus / Plus

                                                                         
Query: 25       ttcgtcgacaagggaccagctggagccgggatgctccatactgatgcataacaaggt 81
                ||||||||||||| ||||||| ||||| || ||  |||| |||||||||||||||||
Sbjct: 10433056 ttcgtcgacaagg-accagctcgagccagggtgtgccattctgatgcataacaaggt 10433111

---

>gb|AY108940.1| Zea mays PCO101909 mRNA sequence
          Length = 961

 Score =  266 bits (134), Expect = 7e-68
 Identities = 273/318 (85%), Gaps = 1/318 (0%)
 Strand = Plus / Plus

                                                                       
Query: 221 cttccgttgacacatcctgagctatacgaggacattgggatcaggcctccgaagggagtc 280
           ||||| ||||| ||||||||| | || || ||||||||||||||||| || |||||||||
Sbjct: 5   cttcccttgactcatcctgagttgtatgaagacattgggatcaggccacccaagggagtc 64

                                                                       
Query: 281 atactatatggggaacctggaacagggaagactctacttgcaaaggctgttgccaattct 340
           ||| ||||||| ||||||||||| || || |||||||| || ||||||||||||||||| 
Sbjct: 65  atattatatggcgaacctggaactggaaaaactctactcgccaaggctgttgccaattca 124

                                                                       
Query: 341 acatcagcaacgttcttgcgtgttgttgggagtgagttgatccagaagtaccttggtgac 400
           ||||| || || |||||||||||||| || |||||  | || || ||||||||||| || 
Sbjct: 125 acatctgcgactttcttgcgtgttgtcggtagtgaacttattcaaaagtaccttggggat 184

                                                                       
Query: 401 ggccctaagcttgtaagggaactgtttagggtggctgatgatctgtctccttcaattgtc 460
           || || ||||| || || ||| ||||||||||||||||||| || ||||| ||||| |||
Sbjct: 185 ggtcccaagctagtcagagaattgtttagggtggctgatgaactttctccctcaatagtc 244

                                                                       
Query: 461 ttcattgatgagattgatgcagtt-ggaacaaagaggtatgatgctcattcaggtggtga 519
           ||||||||||||||||| |||||| ||||| ||||||||||||||||||||||| || ||
Sbjct: 245 ttcattgatgagattgacgcagttgggaacgaagaggtatgatgctcattcaggagggga 304

                             
Query: 520 gcgcgagattcagagaac 537
           ||| |||||||| |||||
Sbjct: 305 gcgtgagattcaaagaac 322

---

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  240 bits (121), Expect = 4e-60
 Identities = 217/249 (87%)
 Strand = Plus / Minus

                                                                            
Query: 78       aggttctctcggtggtcggaattctgcaagatgaagttgatcctatggtttctgtcatga 137
                ||||||| || |||||||||||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 29383932 aggttctgtctgtggtcggaattttgcaagatgaagttgatcctatggtttctgtgatga 29383873

                                                                            
Query: 138      aagttgagaaggcacctttggagtcttatgctgacattggtggtttggatgcccaaattc 197
                |||| ||||| || ||  |||| || |||||||||||||||||  | ||||| || || |
Sbjct: 29383872 aagtggagaaagctccgctggaatcctatgctgacattggtgggctagatgctcagatcc 29383813

                                                                            
Query: 198      aagagatcaaagaggcagtggaacttccgttgacacatcctgagctatacgaggacattg 257
                |||| |||||||||||||| || ||||| ||||| |||||||||||||| || |||||||
Sbjct: 29383812 aagaaatcaaagaggcagttgagcttcctttgacccatcctgagctatatgaagacattg 29383753

                                                                            
Query: 258      ggatcaggcctccgaagggagtcatactatatggggaacctggaacagggaagactctac 317
                | |||||||| || |||||||||||| |||| || |||||||||||||||||||| ||||
Sbjct: 29383752 gcatcaggccacccaagggagtcatattatacggagaacctggaacagggaagacactac 29383693

                         
Query: 318      ttgcaaagg 326
                |||| ||||
Sbjct: 29383692 ttgccaagg 29383684



 Score =  178 bits (90), Expect = 1e-41
 Identities = 183/214 (85%)
 Strand = Plus / Minus

                                                                            
Query: 324      aggctgttgccaattctacatcagcaacgttcttgcgtgttgttgggagtgagttgatcc 383
                |||||||||| || || ||||| ||||| ||||||||||||||||| |||||| | || |
Sbjct: 29383522 aggctgttgctaactccacatccgcaactttcttgcgtgttgttggaagtgagcttattc 29383463

                                                                            
Query: 384      agaagtaccttggtgacggccctaagcttgtaagggaactgtttagggtggctgatgatc 443
                | ||||| |||||||| || || || || || ||||||||||| || || |||||||| |
Sbjct: 29383462 aaaagtatcttggtgatggtcccaaactagtcagggaactgttcagagttgctgatgagc 29383403

                                                                            
Query: 444      tgtctccttcaattgtcttcattgatgagattgatgcagttggaacaaagaggtatgatg 503
                | ||||| ||||| ||||| || |||||||||||||| ||||||||||||||||| ||||
Sbjct: 29383402 tttctccctcaatagtctttatcgatgagattgatgctgttggaacaaagaggtacgatg 29383343

                                                  
Query: 504      ctcattcaggtggtgagcgcgagattcagagaac 537
                |||||||||| || ||||| ||||||||||||||
Sbjct: 29383342 ctcattcaggaggggagcgtgagattcagagaac 29383309

---

>dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0034A04
          Length = 151263

 Score =  240 bits (121), Expect = 4e-60
 Identities = 217/249 (87%)
 Strand = Plus / Minus

                                                                         
Query: 78    aggttctctcggtggtcggaattctgcaagatgaagttgatcctatggtttctgtcatga 137
             ||||||| || |||||||||||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 46854 aggttctgtctgtggtcggaattttgcaagatgaagttgatcctatggtttctgtgatga 46795

                                                                         
Query: 138   aagttgagaaggcacctttggagtcttatgctgacattggtggtttggatgcccaaattc 197
             |||| ||||| || ||  |||| || |||||||||||||||||  | ||||| || || |
Sbjct: 46794 aagtggagaaagctccgctggaatcctatgctgacattggtgggctagatgctcagatcc 46735

                                                                         
Query: 198   aagagatcaaagaggcagtggaacttccgttgacacatcctgagctatacgaggacattg 257
             |||| |||||||||||||| || ||||| ||||| |||||||||||||| || |||||||
Sbjct: 46734 aagaaatcaaagaggcagttgagcttcctttgacccatcctgagctatatgaagacattg 46675

                                                                         
Query: 258   ggatcaggcctccgaagggagtcatactatatggggaacctggaacagggaagactctac 317
             | |||||||| || |||||||||||| |||| || |||||||||||||||||||| ||||
Sbjct: 46674 gcatcaggccacccaagggagtcatattatacggagaacctggaacagggaagacactac 46615

                      
Query: 318   ttgcaaagg 326
             |||| ||||
Sbjct: 46614 ttgccaagg 46606



 Score =  178 bits (90), Expect = 1e-41
 Identities = 183/214 (85%)
 Strand = Plus / Minus

                                                                         
Query: 324   aggctgttgccaattctacatcagcaacgttcttgcgtgttgttgggagtgagttgatcc 383
             |||||||||| || || ||||| ||||| ||||||||||||||||| |||||| | || |
Sbjct: 46444 aggctgttgctaactccacatccgcaactttcttgcgtgttgttggaagtgagcttattc 46385

                                                                         
Query: 384   agaagtaccttggtgacggccctaagcttgtaagggaactgtttagggtggctgatgatc 443
             | ||||| |||||||| || || || || || ||||||||||| || || |||||||| |
Sbjct: 46384 aaaagtatcttggtgatggtcccaaactagtcagggaactgttcagagttgctgatgagc 46325

                                                                         
Query: 444   tgtctccttcaattgtcttcattgatgagattgatgcagttggaacaaagaggtatgatg 503
             | ||||| ||||| ||||| || |||||||||||||| ||||||||||||||||| ||||
Sbjct: 46324 tttctccctcaatagtctttatcgatgagattgatgctgttggaacaaagaggtacgatg 46265

                                               
Query: 504   ctcattcaggtggtgagcgcgagattcagagaac 537
             |||||||||| || ||||| ||||||||||||||
Sbjct: 46264 ctcattcaggaggggagcgtgagattcagagaac 46231

---

>ref|NM_119048.2| Arabidopsis thaliana RPT2A; ATPase AT4G29040 (RPT2A) mRNA, complete
           cds
          Length = 1574

 Score =  222 bits (112), Expect = 9e-55
 Identities = 382/472 (80%)
 Strand = Plus / Plus

                                                                       
Query: 66  tgatgcataacaaggttctctcggtggtcggaattctgcaagatgaagttgatcctatgg 125
           |||||||||| ||||||||||| || || || ||||| ||||||||||| ||||| ||||
Sbjct: 527 tgatgcataataaggttctctctgttgttgggattctacaagatgaagtggatccaatgg 586

                                                                       
Query: 126 tttctgtcatgaaagttgagaaggcacctttggagtcttatgctgacattggtggtttgg 185
           | ||||| |||||||||||||| || ||||||||||| |||||||| ||||| ||||| |
Sbjct: 587 tgtctgtgatgaaagttgagaaagctcctttggagtcatatgctgatattggaggtttag 646

                                                                       
Query: 186 atgcccaaattcaagagatcaaagaggcagtggaacttccgttgacacatcctgagctat 245
           | || || ||||| ||||| || || || || || ||||| ||||| ||||||||| | |
Sbjct: 647 aagctcagattcaggagattaaggaagctgttgagcttcctttgactcatcctgagttgt 706

                                                                       
Query: 246 acgaggacattgggatcaggcctccgaagggagtcatactatatggggaacctggaacag 305
           | || || ||||| || |  || || ||||| || ||  | ||||| || |||||||| |
Sbjct: 707 atgaagatattggtattaaaccaccaaagggtgtaattttgtatggtgagcctggaactg 766

                                                                       
Query: 306 ggaagactctacttgcaaaggctgttgccaattctacatcagcaacgttcttgcgtgttg 365
           |||||||  | ||||| ||||| ||||| ||||| |||||||| || |||||| | ||||
Sbjct: 767 ggaagacattgcttgctaaggcggttgcgaattcaacatcagctactttcttgagagttg 826

                                                                       
Query: 366 ttgggagtgagttgatccagaagtaccttggtgacggccctaagcttgtaagggaactgt 425
           |||| |||||| |||| ||||||||  | || || || ||||||||||| || ||||| |
Sbjct: 827 ttggtagtgagctgattcagaagtatttgggagatggtcctaagcttgtgagagaacttt 886

                                                                       
Query: 426 ttagggtggctgatgatctgtctccttcaattgtcttcattgatgagattgatgcagttg 485
           | || || |||||||| || || || ||||| |||||||| |||||||||||||| ||||
Sbjct: 887 tcagagttgctgatgacctttcaccatcaatcgtcttcatagatgagattgatgctgttg 946

                                                               
Query: 486 gaacaaagaggtatgatgctcattcaggtggtgagcgcgagattcagagaac 537
           | || ||| ||||||| ||||| ||||| ||||| || ||||| || |||||
Sbjct: 947 gtaccaagcggtatgacgctcactcaggaggtgaacgtgagatccaaagaac 998

---

>gb|AY034975.1| Arabidopsis thaliana putative 26S proteasome subunit 4 (At4g29040)
           mRNA, complete cds
          Length = 1590

 Score =  222 bits (112), Expect = 9e-55
 Identities = 382/472 (80%)
 Strand = Plus / Plus

                                                                       
Query: 66  tgatgcataacaaggttctctcggtggtcggaattctgcaagatgaagttgatcctatgg 125
           |||||||||| ||||||||||| || || || ||||| ||||||||||| ||||| ||||
Sbjct: 527 tgatgcataataaggttctctctgttgttgggattctacaagatgaagtggatccaatgg 586

                                                                       
Query: 126 tttctgtcatgaaagttgagaaggcacctttggagtcttatgctgacattggtggtttgg 185
           | ||||| |||||||||||||| || ||||||||||| |||||||| ||||| ||||| |
Sbjct: 587 tgtctgtgatgaaagttgagaaagctcctttggagtcatatgctgatattggaggtttag 646

                                                                       
Query: 186 atgcccaaattcaagagatcaaagaggcagtggaacttccgttgacacatcctgagctat 245
           | || || ||||| ||||| || || || || || ||||| ||||| ||||||||| | |
Sbjct: 647 aagctcagattcaggagattaaggaagctgttgagcttcctttgactcatcctgagttgt 706

                                                                       
Query: 246 acgaggacattgggatcaggcctccgaagggagtcatactatatggggaacctggaacag 305
           | || || ||||| || |  || || ||||| || ||  | ||||| || |||||||| |
Sbjct: 707 atgaagatattggtattaaaccaccaaagggtgtaattttgtatggtgagcctggaactg 766

                                                                       
Query: 306 ggaagactctacttgcaaaggctgttgccaattctacatcagcaacgttcttgcgtgttg 365
           |||||||  | ||||| ||||| ||||| ||||| |||||||| || |||||| | ||||
Sbjct: 767 ggaagacattgcttgctaaggcggttgcgaattcaacatcagctactttcttgagagttg 826

                                                                       
Query: 366 ttgggagtgagttgatccagaagtaccttggtgacggccctaagcttgtaagggaactgt 425
           |||| |||||| |||| ||||||||  | || || || ||||||||||| || ||||| |
Sbjct: 827 ttggtagtgagctgattcagaagtatttgggagatggtcctaagcttgtgagagaacttt 886

                                                                       
Query: 426 ttagggtggctgatgatctgtctccttcaattgtcttcattgatgagattgatgcagttg 485
           | || || |||||||| || || || ||||| |||||||| |||||||||||||| ||||
Sbjct: 887 tcagagttgctgatgacctttcaccatcaatcgtcttcatagatgagattgatgctgttg 946

                                                               
Query: 486 gaacaaagaggtatgatgctcattcaggtggtgagcgcgagattcagagaac 537
           | || ||| ||||||| ||||| ||||| ||||| || ||||| || |||||
Sbjct: 947 gtaccaagcggtatgacgctcactcaggaggtgaacgtgagatccaaagaac 998

---

>dbj|AB161192.1| Arabidopsis thaliana HLR mRNA for 26S proteasome subunit AtRPT2a,
           complete cds
          Length = 1574

 Score =  222 bits (112), Expect = 9e-55
 Identities = 382/472 (80%)
 Strand = Plus / Plus

                                                                       
Query: 66  tgatgcataacaaggttctctcggtggtcggaattctgcaagatgaagttgatcctatgg 125
           |||||||||| ||||||||||| || || || ||||| ||||||||||| ||||| ||||
Sbjct: 527 tgatgcataataaggttctctctgttgttgggattctacaagatgaagtggatccaatgg 586

                                                                       
Query: 126 tttctgtcatgaaagttgagaaggcacctttggagtcttatgctgacattggtggtttgg 185
           | ||||| |||||||||||||| || ||||||||||| |||||||| ||||| ||||| |
Sbjct: 587 tgtctgtgatgaaagttgagaaagctcctttggagtcatatgctgatattggaggtttag 646

                                                                       
Query: 186 atgcccaaattcaagagatcaaagaggcagtggaacttccgttgacacatcctgagctat 245
           | || || ||||| ||||| || || || || || ||||| ||||| ||||||||| | |
Sbjct: 647 aagctcagattcaggagattaaggaagctgttgagcttcctttgactcatcctgagttgt 706

                                                                       
Query: 246 acgaggacattgggatcaggcctccgaagggagtcatactatatggggaacctggaacag 305
           | || || ||||| || |  || || ||||| || ||  | ||||| || |||||||| |
Sbjct: 707 atgaagatattggtattaaaccaccaaagggtgtaattttgtatggtgagcctggaactg 766

                                                                       
Query: 306 ggaagactctacttgcaaaggctgttgccaattctacatcagcaacgttcttgcgtgttg 365
           |||||||  | ||||| ||||| ||||| ||||| |||||||| || |||||| | ||||
Sbjct: 767 ggaagacattgcttgctaaggcggttgcgaattcaacatcagctactttcttgagagttg 826

                                                                       
Query: 366 ttgggagtgagttgatccagaagtaccttggtgacggccctaagcttgtaagggaactgt 425
           |||| |||||| |||| ||||||||  | || || || ||||||||||| || ||||| |
Sbjct: 827 ttggtagtgagctgattcagaagtatttgggagatggtcctaagcttgtgagagaacttt 886

                                                                       
Query: 426 ttagggtggctgatgatctgtctccttcaattgtcttcattgatgagattgatgcagttg 485
           | || || |||||||| || || || ||||| |||||||| |||||||||||||| ||||
Sbjct: 887 tcagagttgctgatgacctttcaccatcaatcgtcttcatagatgagattgatgctgttg 946

                                                               
Query: 486 gaacaaagaggtatgatgctcattcaggtggtgagcgcgagattcagagaac 537
           | || ||| ||||||| ||||| ||||| ||||| || ||||| || |||||
Sbjct: 947 gtaccaagcggtatgacgctcactcaggaggtgaacgtgagatccaaagaac 998

---

>gb|AF123391.1|AF123391 Arabidopsis thaliana 26S proteasome AAA-ATPase subunit RPT2a
           (RPT2a) mRNA, complete cds
          Length = 1568

 Score =  222 bits (112), Expect = 9e-55
 Identities = 382/472 (80%)
 Strand = Plus / Plus

                                                                       
Query: 66  tgatgcataacaaggttctctcggtggtcggaattctgcaagatgaagttgatcctatgg 125
           |||||||||| ||||||||||| || || || ||||| ||||||||||| ||||| ||||
Sbjct: 526 tgatgcataataaggttctctctgttgttgggattctacaagatgaagtggatccaatgg 585

                                                                       
Query: 126 tttctgtcatgaaagttgagaaggcacctttggagtcttatgctgacattggtggtttgg 185
           | ||||| |||||||||||||| || ||||||||||| |||||||| ||||| ||||| |
Sbjct: 586 tgtctgtgatgaaagttgagaaagctcctttggagtcatatgctgatattggaggtttag 645

                                                                       
Query: 186 atgcccaaattcaagagatcaaagaggcagtggaacttccgttgacacatcctgagctat 245
           | || || ||||| ||||| || || || || || ||||| ||||| ||||||||| | |
Sbjct: 646 aagctcagattcaggagattaaggaagctgttgagcttcctttgactcatcctgagttgt 705

                                                                       
Query: 246 acgaggacattgggatcaggcctccgaagggagtcatactatatggggaacctggaacag 305
           | || || ||||| || |  || || ||||| || ||  | ||||| || |||||||| |
Sbjct: 706 atgaagatattggtattaaaccaccaaagggtgtaattttgtatggtgagcctggaactg 765

                                                                       
Query: 306 ggaagactctacttgcaaaggctgttgccaattctacatcagcaacgttcttgcgtgttg 365
           |||||||  | ||||| ||||| ||||| ||||| |||||||| || |||||| | ||||
Sbjct: 766 ggaagacattgcttgctaaggcggttgcgaattcaacatcagctactttcttgagagttg 825

                                                                       
Query: 366 ttgggagtgagttgatccagaagtaccttggtgacggccctaagcttgtaagggaactgt 425
           |||| |||||| |||| ||||||||  | || || || ||||||||||| || ||||| |
Sbjct: 826 ttggtagtgagctgattcagaagtatttgggagatggtcctaagcttgtgagagaacttt 885

                                                                       
Query: 426 ttagggtggctgatgatctgtctccttcaattgtcttcattgatgagattgatgcagttg 485
           | || || |||||||| || || || ||||| |||||||| |||||||||||||| ||||
Sbjct: 886 tcagagttgctgatgacctttcaccatcaatcgtcttcatagatgagattgatgctgttg 945

                                                               
Query: 486 gaacaaagaggtatgatgctcattcaggtggtgagcgcgagattcagagaac 537
           | || ||| ||||||| ||||| ||||| ||||| || ||||| || |||||
Sbjct: 946 gtaccaagcggtatgacgctcactcaggaggtgaacgtgagatccaaagaac 997

---

>gb|AY105318.1| Zea mays PCO073117 mRNA sequence
          Length = 866

 Score =  206 bits (104), Expect = 5e-50
 Identities = 143/156 (91%)
 Strand = Plus / Plus

                                                                       
Query: 386 aagtaccttggtgacggccctaagcttgtaagggaactgtttagggtggctgatgatctg 445
           |||||||||||||| || || |||||||| || ||| |||| ||||||||||||||||| 
Sbjct: 4   aagtaccttggtgatggtcccaagcttgttagagaattgttcagggtggctgatgatctt 63

                                                                       
Query: 446 tctccttcaattgtcttcattgatgagattgatgcagttggaacaaagaggtatgatgct 505
           ||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 64  tctccttcaattgtctttattgatgagattgatgctgttgggacaaagaggtatgatgct 123

                                               
Query: 506 cattcaggtggtgagcgcgagattcagagaaccatg 541
           ||||| ||||||||||| ||||||||||||||||||
Sbjct: 124 cattctggtggtgagcgtgagattcagagaaccatg 159

---

>gb|AF432345.1| Tortula ruralis 26S proteasome regulatory subunit IV (RPT2) mRNA,
            complete cds
          Length = 1845

 Score =  194 bits (98), Expect = 2e-46
 Identities = 380/474 (80%)
 Strand = Plus / Plus

                                                                        
Query: 68   atgcataacaaggttctctcggtggtcggaattctgcaagatgaagttgatcctatggtt 127
            ||||| |||||||||||||| || || ||  |  |||||||||| || || || ||||||
Sbjct: 658  atgcacaacaaggttctctcagttgtggggttattgcaagatgatgtggacccgatggtt 717

                                                                        
Query: 128  tctgtcatgaaagttgagaaggcacctttggagtcttatgctgacattggtggtttggat 187
            || || ||||| |||||||| || ||| ||||||| || ||||| ||||||||  | |||
Sbjct: 718  tcagtgatgaaggttgagaaagcccctctggagtcatacgctgatattggtggactagat 777

                                                                        
Query: 188  gcccaaattcaagagatcaaagaggcagtggaacttccgttgacacatcctgagctatac 247
             | || ||||| || ||||| || |||||||| || ||  | |||||||||||||| |||
Sbjct: 778  cctcagattcaggaaatcaaggaagcagtggagctgcccctcacacatcctgagctttac 837

                                                                        
Query: 248  gaggacattgggatcaggcctccgaagggagtcatactatatggggaacctggaacaggg 307
            ||||||||||| |||| ||| |  ||||| || || || ||||| ||||| ||||| || 
Sbjct: 838  gaggacattggtatcaagccgctcaagggtgttattctgtatggtgaaccgggaactgga 897

                                                                        
Query: 308  aagactctacttgcaaaggctgttgccaattctacatcagcaacgttcttgcgtgttgtt 367
            |||||||| ||||||||||||||||| ||||| || || ||||||||  | || ||||||
Sbjct: 898  aagactcttcttgcaaaggctgttgcgaattcaacgtctgcaacgtttcttcgcgttgtt 957

                                                                        
Query: 368  gggagtgagttgatccagaagtaccttggtgacggccctaagcttgtaagggaactgttt 427
            || |||||| ||||||||||||| || || || || |||||| | ||  ||||  |||||
Sbjct: 958  ggaagtgagctgatccagaagtatctgggagatggacctaagttggtgcgggagttgttt 1017

                                                                        
Query: 428  agggtggctgatgatctgtctccttcaattgtcttcattgatgagattgatgcagttgga 487
             | || ||||||||  |||| ||  | ||||| ||||||||||| || |||||  | |||
Sbjct: 1018 cgagtcgctgatgaattgtcccccactattgttttcattgatgaaatcgatgctatcgga 1077

                                                                  
Query: 488  acaaagaggtatgatgctcattcaggtggtgagcgcgagattcagagaaccatg 541
            |||||||| |||||||| ||||| ||||| || || ||||||||||| ||||||
Sbjct: 1078 acaaagagatatgatgcccattctggtggagaacgtgagattcagaggaccatg 1131

---

>ref|NM_127572.2| Arabidopsis thaliana ATP binding / ATPase/ hydrolase/
           nucleoside-triphosphatase/ nucleotide binding AT2G20140
           mRNA, complete cds
          Length = 1610

 Score =  182 bits (92), Expect = 8e-43
 Identities = 350/436 (80%)
 Strand = Plus / Plus

                                                                       
Query: 66  tgatgcataacaaggttctctcggtggtcggaattctgcaagatgaagttgatcctatgg 125
           |||||||||||||||| ||||| || || || ||||| ||||||||||| ||||| ||||
Sbjct: 497 tgatgcataacaaggtactctctgttgttgggattcttcaagatgaagtggatccaatgg 556

                                                                       
Query: 126 tttctgtcatgaaagttgagaaggcacctttggagtcttatgctgacattggtggtttgg 185
           | ||||| |||||||| |||||||| ||||||||||| |||||||||||||| ||||| |
Sbjct: 557 tgtctgtgatgaaagtggagaaggctcctttggagtcatatgctgacattggaggtttag 616

                                                                       
Query: 186 atgcccaaattcaagagatcaaagaggcagtggaacttccgttgacacatcctgagctat 245
           | || || ||||| ||||| || || || || ||  | || || |||||||| ||||| |
Sbjct: 617 aagctcagattcaggagattaaggaagctgttgagttacctttaacacatcccgagctgt 676

                                                                       
Query: 246 acgaggacattgggatcaggcctccgaagggagtcatactatatggggaacctggaacag 305
           | || || ||||| || | ||| || || || || ||  | ||||| || || || || |
Sbjct: 677 atgaagatattggaattaagccaccaaaaggtgtgatcttgtatggtgagccaggcactg 736

                                                                       
Query: 306 ggaagactctacttgcaaaggctgttgccaattctacatcagcaacgttcttgcgtgttg 365
           |||||||  | ||||| ||||| || || |||||||| ||||| || |||||||||||||
Sbjct: 737 ggaagacattgcttgctaaggcagtggcaaattctacttcagctactttcttgcgtgttg 796

                                                                       
Query: 366 ttgggagtgagttgatccagaagtaccttggtgacggccctaagcttgtaagggaactgt 425
           | || |||||  |||| ||||||||  | || || || || |||||||| |||||||| |
Sbjct: 797 tcggtagtgaactgattcagaagtatttaggagatggtcccaagcttgtgagggaacttt 856

                                                                       
Query: 426 ttagggtggctgatgatctgtctccttcaattgtcttcattgatgagattgatgcagttg 485
           | ||||| |||||||| || |||||||| ||||| ||||| || ||||||||||| ||||
Sbjct: 857 tcagggttgctgatgacctttctccttctattgttttcatagacgagattgatgctgttg 916

                           
Query: 486 gaacaaagaggtatga 501
           | || ||| |||||||
Sbjct: 917 gcaccaagcggtatga 932

---

>gb|DQ222507.1| Solanum tuberosum clone 115D06 26S proteasome subunit 4-like mRNA,
           complete cds
          Length = 1581

 Score =  182 bits (92), Expect = 8e-43
 Identities = 380/476 (79%)
 Strand = Plus / Plus

                                                                       
Query: 66  tgatgcataacaaggttctctcggtggtcggaattctgcaagatgaagttgatcctatgg 125
           |||||||||| |||||||| || || || ||  |||| ||||| || |||||||| ||||
Sbjct: 501 tgatgcataataaggttctatctgttgttgggcttctacaagacgatgttgatccaatgg 560

                                                                       
Query: 126 tttctgtcatgaaagttgagaaggcacctttggagtcttatgctgacattggtggtttgg 185
           | ||||||||||| |||||||| || |||||||| || || ||||| || ||||| ||||
Sbjct: 561 tgtctgtcatgaaggttgagaaagctcctttggaatcctacgctgatataggtggattgg 620

                                                                       
Query: 186 atgcccaaattcaagagatcaaagaggcagtggaacttccgttgacacatcctgagctat 245
           |||| || ||||| ||||| ||||| || || || ||||| ||||| || |||||||| |
Sbjct: 621 atgctcagattcaggagattaaagaagctgttgagcttcccttgactcaccctgagctgt 680

                                                                       
Query: 246 acgaggacattgggatcaggcctccgaagggagtcatactatatggggaacctggaacag 305
           | || |||||||| || |  ||||| || || ||||| || |||||||| || || || |
Sbjct: 681 atgaagacattggtataaaacctcctaaaggggtcattctctatggggagcccgggactg 740

                                                                       
Query: 306 ggaagactctacttgcaaaggctgttgccaattctacatcagcaacgttcttgcgtgttg 365
           | || ||  | ||||||||||| ||||| || || || || ||||| |||||||||||||
Sbjct: 741 gcaaaaccttgcttgcaaaggcagttgcaaactccacttcggcaactttcttgcgtgttg 800

                                                                       
Query: 366 ttgggagtgagttgatccagaagtaccttggtgacggccctaagcttgtaagggaactgt 425
           |||| |||||  |||| ||||| ||  | || || || |||||  | || ||||| || |
Sbjct: 801 ttggaagtgaactgattcagaaatatttgggagatgggcctaaattggtgagggagctct 860

                                                                       
Query: 426 ttagggtggctgatgatctgtctccttcaattgtcttcattgatgagattgatgcagttg 485
           | || || ||||| ||||| || ||||| || ||||||||||||||||||||||||||  
Sbjct: 861 tcagagttgctgacgatctctcaccttctatcgtcttcattgatgagattgatgcagtcc 920

                                                                   
Query: 486 gaacaaagaggtatgatgctcattcaggtggtgagcgcgagattcagagaaccatg 541
           | || |||||||| ||||| ||||| |||||||| || ||||| ||||| ||||||
Sbjct: 921 gtaccaagaggtacgatgcacattctggtggtgaacgtgagatccagaggaccatg 976

---

>gb|AY056335.1| Arabidopsis thaliana putative 26S proteasome subunit 4 (At2g20140)
           mRNA, complete cds
          Length = 1363

 Score =  182 bits (92), Expect = 8e-43
 Identities = 350/436 (80%)
 Strand = Plus / Plus

                                                                       
Query: 66  tgatgcataacaaggttctctcggtggtcggaattctgcaagatgaagttgatcctatgg 125
           |||||||||||||||| ||||| || || || ||||| ||||||||||| ||||| ||||
Sbjct: 461 tgatgcataacaaggtactctctgttgttgggattcttcaagatgaagtggatccaatgg 520

                                                                       
Query: 126 tttctgtcatgaaagttgagaaggcacctttggagtcttatgctgacattggtggtttgg 185
           | ||||| |||||||| |||||||| ||||||||||| |||||||||||||| ||||| |
Sbjct: 521 tgtctgtgatgaaagtggagaaggctcctttggagtcatatgctgacattggaggtttag 580

                                                                       
Query: 186 atgcccaaattcaagagatcaaagaggcagtggaacttccgttgacacatcctgagctat 245
           | || || ||||| ||||| || || || || ||  | || || |||||||| ||||| |
Sbjct: 581 aagctcagattcaggagattaaggaagctgttgagttacctttaacacatcccgagctgt 640

                                                                       
Query: 246 acgaggacattgggatcaggcctccgaagggagtcatactatatggggaacctggaacag 305
           | || || ||||| || | ||| || || || || ||  | ||||| || || || || |
Sbjct: 641 atgaagatattggaattaagccaccaaaaggtgtgatcttgtatggtgagccaggcactg 700

                                                                       
Query: 306 ggaagactctacttgcaaaggctgttgccaattctacatcagcaacgttcttgcgtgttg 365
           |||||||  | ||||| ||||| || || |||||||| ||||| || |||||||||||||
Sbjct: 701 ggaagacattgcttgctaaggcagtggcaaattctacttcagctactttcttgcgtgttg 760

                                                                       
Query: 366 ttgggagtgagttgatccagaagtaccttggtgacggccctaagcttgtaagggaactgt 425
           | || |||||  |||| ||||||||  | || || || || |||||||| |||||||| |
Sbjct: 761 tcggtagtgaactgattcagaagtatttaggagatggtcccaagcttgtgagggaacttt 820

                                                                       
Query: 426 ttagggtggctgatgatctgtctccttcaattgtcttcattgatgagattgatgcagttg 485
           | ||||| |||||||| || |||||||| ||||| ||||| || ||||||||||| ||||
Sbjct: 821 tcagggttgctgatgacctttctccttctattgttttcatagacgagattgatgctgttg 880

                           
Query: 486 gaacaaagaggtatga 501
           | || ||| |||||||
Sbjct: 881 gcaccaagcggtatga 896

---

>gb|AY035072.1| Arabidopsis thaliana putative 26S proteasome subunit 4 (At2g20140)
           mRNA, complete cds
          Length = 1586

 Score =  182 bits (92), Expect = 8e-43
 Identities = 350/436 (80%)
 Strand = Plus / Plus

                                                                       
Query: 66  tgatgcataacaaggttctctcggtggtcggaattctgcaagatgaagttgatcctatgg 125
           |||||||||||||||| ||||| || || || ||||| ||||||||||| ||||| ||||
Sbjct: 479 tgatgcataacaaggtactctctgttgttgggattcttcaagatgaagtggatccaatgg 538

                                                                       
Query: 126 tttctgtcatgaaagttgagaaggcacctttggagtcttatgctgacattggtggtttgg 185
           | ||||| |||||||| |||||||| ||||||||||| |||||||||||||| ||||| |
Sbjct: 539 tgtctgtgatgaaagtggagaaggctcctttggagtcatatgctgacattggaggtttag 598

                                                                       
Query: 186 atgcccaaattcaagagatcaaagaggcagtggaacttccgttgacacatcctgagctat 245
           | || || ||||| ||||| || || || || ||  | || || |||||||| ||||| |
Sbjct: 599 aagctcagattcaggagattaaggaagctgttgagttacctttaacacatcccgagctgt 658

                                                                       
Query: 246 acgaggacattgggatcaggcctccgaagggagtcatactatatggggaacctggaacag 305
           | || || ||||| || | ||| || || || || ||  | ||||| || || || || |
Sbjct: 659 atgaagatattggaattaagccaccaaaaggtgtgatcttgtatggtgagccaggcactg 718

                                                                       
Query: 306 ggaagactctacttgcaaaggctgttgccaattctacatcagcaacgttcttgcgtgttg 365
           |||||||  | ||||| ||||| || || |||||||| ||||| || |||||||||||||
Sbjct: 719 ggaagacattgcttgctaaggcagtggcaaattctacttcagctactttcttgcgtgttg 778

                                                                       
Query: 366 ttgggagtgagttgatccagaagtaccttggtgacggccctaagcttgtaagggaactgt 425
           | || |||||  |||| ||||||||  | || || || || |||||||| |||||||| |
Sbjct: 779 tcggtagtgaactgattcagaagtatttaggagatggtcccaagcttgtgagggaacttt 838

                                                                       
Query: 426 ttagggtggctgatgatctgtctccttcaattgtcttcattgatgagattgatgcagttg 485
           | ||||| |||||||| || |||||||| ||||| ||||| || ||||||||||| ||||
Sbjct: 839 tcagggttgctgatgacctttctccttctattgttttcatagacgagattgatgctgttg 898

                           
Query: 486 gaacaaagaggtatga 501
           | || ||| |||||||
Sbjct: 899 gcaccaagcggtatga 914

---

>emb|BX819727.1|CNS0A8HI Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS20ZD02 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1465

 Score =  182 bits (92), Expect = 8e-43
 Identities = 350/436 (80%)
 Strand = Plus / Plus

                                                                       
Query: 66  tgatgcataacaaggttctctcggtggtcggaattctgcaagatgaagttgatcctatgg 125
           |||||||||||||||| ||||| || || || ||||| ||||||||||| ||||| ||||
Sbjct: 502 tgatgcataacaaggtactctctgttgttgggattcttcaagatgaagtggatccaatgg 561

                                                                       
Query: 126 tttctgtcatgaaagttgagaaggcacctttggagtcttatgctgacattggtggtttgg 185
           | ||||| |||||||| |||||||| ||||||||||| |||||||||||||| ||||| |
Sbjct: 562 tgtctgtgatgaaagtggagaaggctcctttggagtcatatgctgacattggaggtttag 621

                                                                       
Query: 186 atgcccaaattcaagagatcaaagaggcagtggaacttccgttgacacatcctgagctat 245
           | || || ||||| ||||| || || || || ||  | || || |||||||| ||||| |
Sbjct: 622 aagctcagattcaggagattaaggaagctgttgagttacctttaacacatcccgagctgt 681

                                                                       
Query: 246 acgaggacattgggatcaggcctccgaagggagtcatactatatggggaacctggaacag 305
           | || || ||||| || | ||| || || || || ||  | ||||| || || || || |
Sbjct: 682 atgaagatattggaattaagccaccaaaaggtgtgatcttgtatggtgagccaggcactg 741

                                                                       
Query: 306 ggaagactctacttgcaaaggctgttgccaattctacatcagcaacgttcttgcgtgttg 365
           |||||||  | ||||| ||||| || || |||||||| ||||| || |||||||||||||
Sbjct: 742 ggaagacattgcttgctaaggcagtggcaaattctacttcagctactttcttgcgtgttg 801

                                                                       
Query: 366 ttgggagtgagttgatccagaagtaccttggtgacggccctaagcttgtaagggaactgt 425
           | || |||||  |||| ||||||||  | || || || || |||||||| |||||||| |
Sbjct: 802 tcggtagtgaactgattcagaagtatttaggagatggtcccaagcttgtgagggaacttt 861

                                                                       
Query: 426 ttagggtggctgatgatctgtctccttcaattgtcttcattgatgagattgatgcagttg 485
           | ||||| |||||||| || |||||||| ||||| ||||| || ||||||||||| ||||
Sbjct: 862 tcagggttgctgatgacctttctccttctattgttttcatagacgagattgatgctgttg 921

                           
Query: 486 gaacaaagaggtatga 501
           | || ||| |||||||
Sbjct: 922 gcaccaagcggtatga 937

---

>gb|AC161749.3| Medicago truncatula chromosome 7 BAC clone mth2-182g1, complete
             sequence
          Length = 47909

 Score =  176 bits (89), Expect = 5e-41
 Identities = 209/249 (83%)
 Strand = Plus / Minus

                                                                         
Query: 78    aggttctctcggtggtcggaattctgcaagatgaagttgatcctatggtttctgtcatga 137
             ||||||| || || || ||| |||| ||||||||||||||||| ||||| ||||| ||||
Sbjct: 38803 aggttctttctgttgttggacttcttcaagatgaagttgatccaatggtctctgtaatga 38744

                                                                         
Query: 138   aagttgagaaggcacctttggagtcttatgctgacattggtggtttggatgcccaaattc 197
             | ||||||||||| |||||||| || |||||||||||||||||||| |||||||| || |
Sbjct: 38743 aggttgagaaggctcctttggaatcatatgctgacattggtggtttagatgcccagatac 38684

                                                                         
Query: 198   aagagatcaaagaggcagtggaacttccgttgacacatcctgagctatacgaggacattg 257
             | || || ||||| || || || |||||  ||||||||||||| || || || || ||||
Sbjct: 38683 aggaaattaaagaagccgtagagcttcccctgacacatcctgaactgtatgaagatattg 38624

                                                                         
Query: 258   ggatcaggcctccgaagggagtcatactatatggggaacctggaacagggaagactctac 317
             | |||| |||||| |||||||||||  ||||||| |||||||| ||||| ||||| || |
Sbjct: 38623 gtatcaagcctccaaagggagtcattttatatggagaacctggtacaggaaagacacttc 38564

                      
Query: 318   ttgcaaagg 326
             |||||||||
Sbjct: 38563 ttgcaaagg 38555



 Score =  113 bits (57), Expect = 6e-22
 Identities = 147/177 (83%)
 Strand = Plus / Minus

                                                                         
Query: 324   aggctgttgccaattctacatcagcaacgttcttgcgtgttgttgggagtgagttgatcc 383
             ||||||| ||||| || ||||||||||| ||||||||||||||||| ||||| ||||| |
Sbjct: 37767 aggctgtggccaactcaacatcagcaacattcttgcgtgttgttggtagtgaattgattc 37708

                                                                         
Query: 384   agaagtaccttggtgacggccctaagcttgtaagggaactgtttagggtggctgatgatc 443
             | || ||| | || || || || || ||||| |||||||| ||| | || ||||||||||
Sbjct: 37707 aaaaatacttaggagatggtccaaaacttgtgagggaactttttcgagttgctgatgatc 37648

                                                                      
Query: 444   tgtctccttcaattgtcttcattgatgagattgatgcagttggaacaaagaggtatg 500
             | ||||| || |||||||| |||||||| || || || ||||| |||||||||||||
Sbjct: 37647 tttctccctctattgtctttattgatgaaatagacgctgttggtacaaagaggtatg 37591



 Score = 48.1 bits (24), Expect = 0.030
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                             
Query: 494   aggtatgatgctcattcaggtggtgagcgcgagattcagagaaccatg 541
             |||||||||||||| |||||||| ||||| || ||||| || ||||||
Sbjct: 37444 aggtatgatgctcactcaggtggagagcgtgaaattcaaaggaccatg 37397

---

>gb|AC150776.2| Medicago truncatula chromosome 7 BAC clone mte1-45n16, complete
            sequence
          Length = 107886

 Score =  176 bits (89), Expect = 5e-41
 Identities = 209/249 (83%)
 Strand = Plus / Minus

                                                                        
Query: 78   aggttctctcggtggtcggaattctgcaagatgaagttgatcctatggtttctgtcatga 137
            ||||||| || || || ||| |||| ||||||||||||||||| ||||| ||||| ||||
Sbjct: 9961 aggttctttctgttgttggacttcttcaagatgaagttgatccaatggtctctgtaatga 9902

                                                                        
Query: 138  aagttgagaaggcacctttggagtcttatgctgacattggtggtttggatgcccaaattc 197
            | ||||||||||| |||||||| || |||||||||||||||||||| |||||||| || |
Sbjct: 9901 aggttgagaaggctcctttggaatcatatgctgacattggtggtttagatgcccagatac 9842

                                                                        
Query: 198  aagagatcaaagaggcagtggaacttccgttgacacatcctgagctatacgaggacattg 257
            | || || ||||| || || || |||||  ||||||||||||| || || || || ||||
Sbjct: 9841 aggaaattaaagaagccgtagagcttcccctgacacatcctgaactgtatgaagatattg 9782

                                                                        
Query: 258  ggatcaggcctccgaagggagtcatactatatggggaacctggaacagggaagactctac 317
            | |||| |||||| |||||||||||  ||||||| |||||||| ||||| ||||| || |
Sbjct: 9781 gtatcaagcctccaaagggagtcattttatatggagaacctggtacaggaaagacacttc 9722

                     
Query: 318  ttgcaaagg 326
            |||||||||
Sbjct: 9721 ttgcaaagg 9713



 Score =  113 bits (57), Expect = 6e-22
 Identities = 147/177 (83%)
 Strand = Plus / Minus

                                                                        
Query: 324  aggctgttgccaattctacatcagcaacgttcttgcgtgttgttgggagtgagttgatcc 383
            ||||||| ||||| || ||||||||||| ||||||||||||||||| ||||| ||||| |
Sbjct: 8925 aggctgtggccaactcaacatcagcaacattcttgcgtgttgttggtagtgaattgattc 8866

                                                                        
Query: 384  agaagtaccttggtgacggccctaagcttgtaagggaactgtttagggtggctgatgatc 443
            | || ||| | || || || || || ||||| |||||||| ||| | || ||||||||||
Sbjct: 8865 aaaaatacttaggagatggtccaaaacttgtgagggaactttttcgagttgctgatgatc 8806

                                                                     
Query: 444  tgtctccttcaattgtcttcattgatgagattgatgcagttggaacaaagaggtatg 500
            | ||||| || |||||||| |||||||| || || || ||||| |||||||||||||
Sbjct: 8805 tttctccctctattgtctttattgatgaaatagacgctgttggtacaaagaggtatg 8749



 Score = 48.1 bits (24), Expect = 0.030
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                            
Query: 494  aggtatgatgctcattcaggtggtgagcgcgagattcagagaaccatg 541
            |||||||||||||| |||||||| ||||| || ||||| || ||||||
Sbjct: 8602 aggtatgatgctcactcaggtggagagcgtgaaattcaaaggaccatg 8555

---

>gb|AF372977.1|AF372977 Arabidopsis thaliana At2g20140/T2G17.6 mRNA, complete cds
          Length = 1578

 Score =  174 bits (88), Expect = 2e-40
 Identities = 349/436 (80%)
 Strand = Plus / Plus

                                                                       
Query: 66  tgatgcataacaaggttctctcggtggtcggaattctgcaagatgaagttgatcctatgg 125
           |||||||||||||||| ||||| || || || ||||| ||||||||||| ||||| ||||
Sbjct: 484 tgatgcataacaaggtactctctgttgttgggattcttcaagatgaagtggatccaatgg 543

                                                                       
Query: 126 tttctgtcatgaaagttgagaaggcacctttggagtcttatgctgacattggtggtttgg 185
           | |||||  ||||||| |||||||| ||||||||||| |||||||||||||| ||||| |
Sbjct: 544 tgtctgtggtgaaagtggagaaggctcctttggagtcatatgctgacattggaggtttag 603

                                                                       
Query: 186 atgcccaaattcaagagatcaaagaggcagtggaacttccgttgacacatcctgagctat 245
           | || || ||||| ||||| || || || || ||  | || || |||||||| ||||| |
Sbjct: 604 aagctcagattcaggagattaaggaagctgttgagttacctttaacacatcccgagctgt 663

                                                                       
Query: 246 acgaggacattgggatcaggcctccgaagggagtcatactatatggggaacctggaacag 305
           | || || ||||| || | ||| || || || || ||  | ||||| || || || || |
Sbjct: 664 atgaagatattggaattaagccaccaaaaggtgtgatcttgtatggtgagccaggcactg 723

                                                                       
Query: 306 ggaagactctacttgcaaaggctgttgccaattctacatcagcaacgttcttgcgtgttg 365
           |||||||  | ||||| ||||| || || |||||||| ||||| || |||||||||||||
Sbjct: 724 ggaagacattgcttgctaaggcagtggcaaattctacttcagctactttcttgcgtgttg 783

                                                                       
Query: 366 ttgggagtgagttgatccagaagtaccttggtgacggccctaagcttgtaagggaactgt 425
           | || |||||  |||| ||||||||  | || || || || |||||||| |||||||| |
Sbjct: 784 tcggtagtgaactgattcagaagtatttaggagatggtcccaagcttgtgagggaacttt 843

                                                                       
Query: 426 ttagggtggctgatgatctgtctccttcaattgtcttcattgatgagattgatgcagttg 485
           | ||||| |||||||| || |||||||| ||||| ||||| || ||||||||||| ||||
Sbjct: 844 tcagggttgctgatgacctttctccttctattgttttcatagacgagattgatgctgttg 903

                           
Query: 486 gaacaaagaggtatga 501
           | || ||| |||||||
Sbjct: 904 gcaccaagcggtatga 919

---

>gb|AY087584.1| Arabidopsis thaliana clone 36815 mRNA, complete sequence
          Length = 1478

 Score =  174 bits (88), Expect = 2e-40
 Identities = 349/436 (80%)
 Strand = Plus / Plus

                                                                       
Query: 66  tgatgcataacaaggttctctcggtggtcggaattctgcaagatgaagttgatcctatgg 125
           |||||||||||||||| ||||| || || || ||||| ||||||||||| ||||| ||||
Sbjct: 487 tgatgcataacaaggtactctctgttgttgggattcttcaagatgaagtggatccaatgg 546

                                                                       
Query: 126 tttctgtcatgaaagttgagaaggcacctttggagtcttatgctgacattggtggtttgg 185
           | ||||| |||||||| |||||||| ||||||||||| |||||||||||||| ||||| |
Sbjct: 547 tgtctgtgatgaaagtggagaaggctcctttggagtcatatgctgacattggaggtttag 606

                                                                       
Query: 186 atgcccaaattcaagagatcaaagaggcagtggaacttccgttgacacatcctgagctat 245
           | || || ||||| ||||| || || || || ||  | || || |||||||| ||||| |
Sbjct: 607 aagctcagattcaggagattaaggaagctgttgagttacctttaacacatcccgagctgt 666

                                                                       
Query: 246 acgaggacattgggatcaggcctccgaagggagtcatactatatggggaacctggaacag 305
           | || || ||||| || | ||| || || || || ||  | ||||| || || || || |
Sbjct: 667 atgaagatattggaattaagccaccaaaaggtgtgatcttgtatggtgagccaggcactg 726

                                                                       
Query: 306 ggaagactctacttgcaaaggctgttgccaattctacatcagcaacgttcttgcgtgttg 365
           |||||||  | ||||| ||||| || || |||||||| ||||| || |||||||||||||
Sbjct: 727 ggaagacattgcttgctaaggcagtggcaaattctacttcagctactttcttgcgtgttg 786

                                                                       
Query: 366 ttgggagtgagttgatccagaagtaccttggtgacggccctaagcttgtaagggaactgt 425
           | || |||||  |||| ||||||||  | || || || || |||||||| |||||||| |
Sbjct: 787 tcggtagtgaactgattcagaagtatttaggagatggtcccaagcttgtgagggaacttt 846

                                                                       
Query: 426 ttagggtggctgatgatctgtctccttcaattgtcttcattgatgagattgatgcagttg 485
           | ||||| |||||||| || |||||||| ||||  ||||| || ||||||||||| ||||
Sbjct: 847 tcagggttgctgatgacctttctccttctattggtttcatagacgagattgatgctgttg 906

                           
Query: 486 gaacaaagaggtatga 501
           | || ||| |||||||
Sbjct: 907 gcaccaagcggtatga 922

---

>ref|XM_791137.1| PREDICTED: Strongylocentrotus purpuratus similar to CG5289-PA
           (LOC591581), mRNA
          Length = 1396

 Score =  117 bits (59), Expect = 4e-23
 Identities = 194/239 (81%)
 Strand = Plus / Plus

                                                                       
Query: 260 atcaggcctccgaagggagtcatactatatggggaacctggaacagggaagactctactt 319
           ||||| ||||| ||||| ||||| |||||||| |  ||||||||||| || ||||| |||
Sbjct: 719 atcagacctcccaagggtgtcattctatatggtgctcctggaacaggtaaaactctcctt 778

                                                                       
Query: 320 gcaaaggctgttgccaattctacatcagcaacgttcttgcgtgttgttgggagtgagttg 379
           || || ||||||||||||   |||||||| || ||| | |||||||| ||    ||  | 
Sbjct: 779 gctaaagctgttgccaatcaaacatcagccacattccttcgtgttgtaggctcagaactc 838

                                                                       
Query: 380 atccagaagtaccttggtgacggccctaagcttgtaagggaactgtttagggtggctgat 439
           |||||||| ||| | |||||||| || |||||||||||||| ||||| || |||||||| 
Sbjct: 839 atccagaaatacttgggtgacggaccgaagcttgtaagggagctgttcagagtggctgaa 898

                                                                      
Query: 440 gatctgtctccttcaattgtcttcattgatgagattgatgcagttggaacaaagaggta 498
           || |   |||| ||||| ||||||||||||||||| |||||  ||||||||||||||||
Sbjct: 899 gagcatgctccatcaatagtcttcattgatgagatcgatgctattggaacaaagaggta 957

---

>emb|AL161574.2|ATCHRIV70 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 70
          Length = 198429

 Score =  111 bits (56), Expect = 2e-21
 Identities = 137/164 (83%)
 Strand = Plus / Plus

                                                                         
Query: 78    aggttctctcggtggtcggaattctgcaagatgaagttgatcctatggtttctgtcatga 137
             |||||||||| || || || ||||| ||||||||||| ||||| ||||| ||||| ||||
Sbjct: 41014 aggttctctctgttgttgggattctacaagatgaagtggatccaatggtgtctgtgatga 41073

                                                                         
Query: 138   aagttgagaaggcacctttggagtcttatgctgacattggtggtttggatgcccaaattc 197
             |||||||||| || ||||||||||| |||||||| ||||| ||||| || || || ||||
Sbjct: 41074 aagttgagaaagctcctttggagtcatatgctgatattggaggtttagaagctcagattc 41133

                                                         
Query: 198   aagagatcaaagaggcagtggaacttccgttgacacatcctgag 241
             | ||||| || || || || || ||||| ||||| |||||||||
Sbjct: 41134 aggagattaaggaagctgttgagcttcctttgactcatcctgag 41177



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 134/163 (82%)
 Strand = Plus / Plus

                                                                         
Query: 324   aggctgttgccaattctacatcagcaacgttcttgcgtgttgttgggagtgagttgatcc 383
             |||| ||||| ||||| |||||||| || |||||| | |||||||| |||||| |||| |
Sbjct: 41576 aggcggttgcgaattcaacatcagctactttcttgagagttgttggtagtgagctgattc 41635

                                                                         
Query: 384   agaagtaccttggtgacggccctaagcttgtaagggaactgtttagggtggctgatgatc 443
             |||||||  | || || || ||||||||||| || ||||| || || || |||||||| |
Sbjct: 41636 agaagtatttgggagatggtcctaagcttgtgagagaacttttcagagttgctgatgacc 41695

                                                        
Query: 444   tgtctccttcaattgtcttcattgatgagattgatgcagttgg 486
             | || || ||||| |||||||| |||||||||||||| |||||
Sbjct: 41696 tttcaccatcaatcgtcttcatagatgagattgatgctgttgg 41738

---

>emb|AL078469.2|ATF25O24 Arabidopsis thaliana DNA chromosome 4, BAC clone F25O24 (ESSA project)
          Length = 97714

 Score =  111 bits (56), Expect = 2e-21
 Identities = 137/164 (83%)
 Strand = Plus / Plus

                                                                         
Query: 78    aggttctctcggtggtcggaattctgcaagatgaagttgatcctatggtttctgtcatga 137
             |||||||||| || || || ||||| ||||||||||| ||||| ||||| ||||| ||||
Sbjct: 66045 aggttctctctgttgttgggattctacaagatgaagtggatccaatggtgtctgtgatga 66104

                                                                         
Query: 138   aagttgagaaggcacctttggagtcttatgctgacattggtggtttggatgcccaaattc 197
             |||||||||| || ||||||||||| |||||||| ||||| ||||| || || || ||||
Sbjct: 66105 aagttgagaaagctcctttggagtcatatgctgatattggaggtttagaagctcagattc 66164

                                                         
Query: 198   aagagatcaaagaggcagtggaacttccgttgacacatcctgag 241
             | ||||| || || || || || ||||| ||||| |||||||||
Sbjct: 66165 aggagattaaggaagctgttgagcttcctttgactcatcctgag 66208



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 134/163 (82%)
 Strand = Plus / Plus

                                                                         
Query: 324   aggctgttgccaattctacatcagcaacgttcttgcgtgttgttgggagtgagttgatcc 383
             |||| ||||| ||||| |||||||| || |||||| | |||||||| |||||| |||| |
Sbjct: 66607 aggcggttgcgaattcaacatcagctactttcttgagagttgttggtagtgagctgattc 66666

                                                                         
Query: 384   agaagtaccttggtgacggccctaagcttgtaagggaactgtttagggtggctgatgatc 443
             |||||||  | || || || ||||||||||| || ||||| || || || |||||||| |
Sbjct: 66667 agaagtatttgggagatggtcctaagcttgtgagagaacttttcagagttgctgatgacc 66726

                                                        
Query: 444   tgtctccttcaattgtcttcattgatgagattgatgcagttgg 486
             | || || ||||| |||||||| |||||||||||||| |||||
Sbjct: 66727 tttcaccatcaatcgtcttcatagatgagattgatgctgttgg 66769

---

>emb|AL078470.1|ATF19B15 Arabidopsis thaliana DNA chromosome 4, BAC clone F19B15 (ESSA project)
          Length = 101679

 Score =  111 bits (56), Expect = 2e-21
 Identities = 137/164 (83%)
 Strand = Plus / Plus

                                                                         
Query: 78    aggttctctcggtggtcggaattctgcaagatgaagttgatcctatggtttctgtcatga 137
             |||||||||| || || || ||||| ||||||||||| ||||| ||||| ||||| ||||
Sbjct: 24541 aggttctctctgttgttgggattctacaagatgaagtggatccaatggtgtctgtgatga 24600

                                                                         
Query: 138   aagttgagaaggcacctttggagtcttatgctgacattggtggtttggatgcccaaattc 197
             |||||||||| || ||||||||||| |||||||| ||||| ||||| || || || ||||
Sbjct: 24601 aagttgagaaagctcctttggagtcatatgctgatattggaggtttagaagctcagattc 24660

                                                         
Query: 198   aagagatcaaagaggcagtggaacttccgttgacacatcctgag 241
             | ||||| || || || || || ||||| ||||| |||||||||
Sbjct: 24661 aggagattaaggaagctgttgagcttcctttgactcatcctgag 24704



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 134/163 (82%)
 Strand = Plus / Plus

                                                                         
Query: 324   aggctgttgccaattctacatcagcaacgttcttgcgtgttgttgggagtgagttgatcc 383
             |||| ||||| ||||| |||||||| || |||||| | |||||||| |||||| |||| |
Sbjct: 25103 aggcggttgcgaattcaacatcagctactttcttgagagttgttggtagtgagctgattc 25162

                                                                         
Query: 384   agaagtaccttggtgacggccctaagcttgtaagggaactgtttagggtggctgatgatc 443
             |||||||  | || || || ||||||||||| || ||||| || || || |||||||| |
Sbjct: 25163 agaagtatttgggagatggtcctaagcttgtgagagaacttttcagagttgctgatgacc 25222

                                                        
Query: 444   tgtctccttcaattgtcttcattgatgagattgatgcagttgg 486
             | || || ||||| |||||||| |||||||||||||| |||||
Sbjct: 25223 tttcaccatcaatcgtcttcatagatgagattgatgctgttgg 25265

---

>gb|AC006081.4| Arabidopsis thaliana chromosome 2 clone T2G17 map mi148, complete
             sequence
          Length = 97814

 Score =  101 bits (51), Expect = 2e-18
 Identities = 93/107 (86%)
 Strand = Plus / Minus

                                                                         
Query: 98    attctgcaagatgaagttgatcctatggtttctgtcatgaaagttgagaaggcacctttg 157
             ||||| ||||||||||| ||||| ||||| ||||| |||||||| |||||||| ||||||
Sbjct: 25424 attcttcaagatgaagtggatccaatggtgtctgtgatgaaagtggagaaggctcctttg 25365

                                                            
Query: 158   gagtcttatgctgacattggtggtttggatgcccaaattcaagagat 204
             ||||| |||||||||||||| ||||| || || || ||||| |||||
Sbjct: 25364 gagtcatatgctgacattggaggtttagaagctcagattcaggagat 25318



 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 137/166 (82%)
 Strand = Plus / Minus

                                                                         
Query: 335   aattctacatcagcaacgttcttgcgtgttgttgggagtgagttgatccagaagtacctt 394
             |||||||| ||||| || |||||||||||||| || |||||  |||| ||||||||  | 
Sbjct: 24785 aattctacttcagctactttcttgcgtgttgtcggtagtgaactgattcagaagtattta 24726

                                                                         
Query: 395   ggtgacggccctaagcttgtaagggaactgtttagggtggctgatgatctgtctccttca 454
             || || || || |||||||| |||||||| || ||||| |||||||| || |||||||| 
Sbjct: 24725 ggagatggtcccaagcttgtgagggaacttttcagggttgctgatgacctttctccttct 24666

                                                           
Query: 455   attgtcttcattgatgagattgatgcagttggaacaaagaggtatg 500
             ||||| ||||| || ||||||||||| ||||| || ||| ||||||
Sbjct: 24665 attgttttcatagacgagattgatgctgttggcaccaagcggtatg 24620

---

>emb|AJ293726.1|BNA293726 Brassica napus homologue of AT4g29030 gene, homologue of SPH gene,
             homologue of AT4g29040 gene (pseudogene) and homologue of
             AT4g29060 gene (pseudogene, partial)
          Length = 15378

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 91/107 (85%)
 Strand = Plus / Plus

                                                                         
Query: 98    attctgcaagatgaagttgatcctatggtttctgtcatgaaagttgagaaggcacctttg 157
             ||||| || ||||| || ||||| ||||| || || ||||||||||||||||| || |||
Sbjct: 11356 attctacacgatgaggtggatccgatggtgtcggtgatgaaagttgagaaggctccgttg 11415

                                                            
Query: 158   gagtcttatgctgacattggtggtttggatgcccaaattcaagagat 204
             |||||||||||||||||||| ||||| || || || ||||| |||||
Sbjct: 11416 gagtcttatgctgacattggaggtttagaggctcagattcaggagat 11462



 Score = 48.1 bits (24), Expect = 0.030
 Identities = 66/80 (82%)
 Strand = Plus / Plus

                                                                         
Query: 407   aagcttgtaagggaactgtttagggtggctgatgatctgtctccttcaattgtcttcatt 466
             |||||||| ||||| || || || || || ||||| || || || ||||| |||||||| 
Sbjct: 12076 aagcttgtgagggagcttttcagagttgccgatgacctttcaccatcaatggtcttcatc 12135

                                 
Query: 467   gatgagattgatgcagttgg 486
             |||||||||||||| |||||
Sbjct: 12136 gatgagattgatgctgttgg 12155

---

>emb|AJ291500.1|BNA291500 Brassica napus homologue of SPH gene, AT4g29040 gene and AT4g29100
            gene, clone SI13
          Length = 14775

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 86/101 (85%)
 Strand = Plus / Plus

                                                                        
Query: 104  caagatgaagttgatcctatggtttctgtcatgaaagttgagaaggcacctttggagtct 163
            |||||||| || ||||| ||||| ||||| ||||||||||||||||| || |||||||| 
Sbjct: 2890 caagatgaggtggatccgatggtgtctgtgatgaaagttgagaaggctccgttggagtcg 2949

                                                     
Query: 164  tatgctgacattggtggtttggatgcccaaattcaagagat 204
            |||||||| ||||| ||||| || || || ||||| |||||
Sbjct: 2950 tatgctgatattggaggtttagaagctcagattcaggagat 2990



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 132/163 (80%)
 Strand = Plus / Plus

                                                                        
Query: 324  aggctgttgccaattctacatcagcaacgttcttgcgtgttgttgggagtgagttgatcc 383
            ||||||| || |||||||||||||| || |||||| | ||||| ||||||||  |||| |
Sbjct: 3370 aggctgtggcgaattctacatcagctactttcttgagagttgtagggagtgaactgattc 3429

                                                                        
Query: 384  agaagtaccttggtgacggccctaagcttgtaagggaactgtttagggtggctgatgatc 443
            |||||||  | || || || || ||||| || ||||| || || || || || ||||| |
Sbjct: 3430 agaagtatttgggagatggtcccaagctcgtgagggagcttttcagagttgccgatgacc 3489

                                                       
Query: 444  tgtctccttcaattgtcttcattgatgagattgatgcagttgg 486
            | || || ||||| ||||||||||||||||||||||| |||||
Sbjct: 3490 tttcaccatcaatcgtcttcattgatgagattgatgctgttgg 3532

---

>gb|AF517885.1| Griffithsia japonica isolate Gj112 26S proteasome subunit mRNA,
           partial cds
          Length = 896

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 118/146 (80%)
 Strand = Plus / Plus

                                                                       
Query: 191 caaattcaagagatcaaagaggcagtggaacttccgttgacacatcctgagctatacgag 250
           ||||| || ||||| || ||||| || || || ||| |||||||||||||||| ||||||
Sbjct: 110 caaatccaggagattaaggaggccgttgagctgccgctgacacatcctgagctgtacgag 169

                                                                       
Query: 251 gacattgggatcaggcctccgaagggagtcatactatatggggaacctggaacagggaag 310
           |||||||| ||||  || |||||||| || || || || || ||||| || || || || 
Sbjct: 170 gacattggcatcaaaccaccgaagggcgtgattctgtacggcgaaccgggtaccggcaaa 229

                                     
Query: 311 actctacttgcaaaggctgttgccaa 336
           || ||||| |||||||| ||||||||
Sbjct: 230 acgctactggcaaaggcggttgccaa 255

---

>gb|BC049471.1| Danio rerio proteasome (prosome, macropain) 26S subunit, ATPase, 1a,
            mRNA (cDNA clone MGC:56516 IMAGE:5913784), complete cds
          Length = 1749

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 76/91 (83%)
 Strand = Plus / Plus

                                                                        
Query: 447  ctccttcaattgtcttcattgatgagattgatgcagttggaacaaagaggtatgatgctc 506
            |||| |||||||||||||| |||||||| || ||  | || ||||||||||||||  || 
Sbjct: 1126 ctccctcaattgtcttcatagatgagatcgacgctatcggcacaaagaggtatgactcta 1185

                                           
Query: 507  attcaggtggtgagcgcgagattcagagaac 537
            ||||||| || ||||| ||||| ||||||||
Sbjct: 1186 attcaggaggagagcgtgagatccagagaac 1216

---

>ref|NM_200033.1| Danio rerio proteasome (prosome, macropain) 26S subunit, ATPase, 1a
            (psmc1a), mRNA
          Length = 1749

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 76/91 (83%)
 Strand = Plus / Plus

                                                                        
Query: 447  ctccttcaattgtcttcattgatgagattgatgcagttggaacaaagaggtatgatgctc 506
            |||| |||||||||||||| |||||||| || ||  | || ||||||||||||||  || 
Sbjct: 1126 ctccctcaattgtcttcatagatgagatcgacgctatcggcacaaagaggtatgactcta 1185

                                           
Query: 507  attcaggtggtgagcgcgagattcagagaac 537
            ||||||| || ||||| ||||| ||||||||
Sbjct: 1186 attcaggaggagagcgtgagatccagagaac 1216

---

>gb|BC054287.1| Xenopus laevis protease (prosome, macropain) 26S subunit, ATPase 1,
           mRNA (cDNA clone MGC:64535 IMAGE:6878698), complete cds
          Length = 1595

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 70/83 (84%)
 Strand = Plus / Plus

                                                                       
Query: 455 attgtcttcattgatgagattgatgcagttggaacaaagaggtatgatgctcattcaggt 514
           ||||| || |||||||||||||||||| |||| |||||||| |||||| |  |||| |||
Sbjct: 872 attgtgtttattgatgagattgatgcaattggtacaaagagatatgattccaattctggt 931

                                  
Query: 515 ggtgagcgcgagattcagagaac 537
           || ||||| || || ||||||||
Sbjct: 932 ggggagcgagaaatccagagaac 954

---

>ref|XM_694176.1| PREDICTED: Danio rerio similar to Proteasome (prosome, macropain)
           26S subunit, ATPase, 1 (LOC573830), mRNA
          Length = 1550

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 76/91 (83%)
 Strand = Plus / Plus

                                                                       
Query: 447 ctccttcaattgtcttcattgatgagattgatgcagttggaacaaagaggtatgatgctc 506
           |||| |||||||||||||| |||||||| || ||  | || ||||||||||||||  || 
Sbjct: 533 ctccctcaattgtcttcatagatgagatcgacgctatcggcacaaagaggtatgactcta 592

                                          
Query: 507 attcaggtggtgagcgcgagattcagagaac 537
           ||||||| || ||||| ||||| ||||||||
Sbjct: 593 attcaggaggagagcgtgagatccagagaac 623

---

>gb|AC087422.1|AC087422 Caenorhabditis briggsae cosmid CB033P12, complete sequence
          Length = 97900

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                   
Query: 452   tcaattgtcttcattgatgagattgatgcagttggaac 489
             ||||| |||||||| |||||||||||||||||||||||
Sbjct: 37491 tcaatcgtcttcatcgatgagattgatgcagttggaac 37528



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 60/71 (84%)
 Strand = Plus / Plus

                                                                         
Query: 278   gtcatactatatggggaacctggaacagggaagactctacttgcaaaggctgttgccaat 337
             ||||| || ||||| ||||||||||| || ||||| || ||||| ||||| || ||||||
Sbjct: 37317 gtcattctttatggagaacctggaactggaaagacgcttcttgccaaggcagtggccaat 37376

                        
Query: 338   tctacatcagc 348
             || ||||||||
Sbjct: 37377 tcaacatcagc 37387

---

>dbj|AK058779.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-C01, full
           insert sequence
          Length = 651

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                         
Query: 496 gtatgatgctcattcaggtggtgagcgcgagattcagagaaccatg 541
           ||||||||||||||| ||||| ||||| || |||||||||||||||
Sbjct: 1   gtatgatgctcattcgggtggagagcgtgaaattcagagaaccatg 46

---

>gb|AY103957.1| Zea mays PCO116832 mRNA sequence
          Length = 1820

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                             
Query: 455 attgtcttcattgatgagattgatgcagttggaa 488
           |||||||||||||||||||||||||| |||||||
Sbjct: 367 attgtcttcattgatgagattgatgccgttggaa 400

---

>ref|XM_660561.1| Cryptosporidium hominis TU502 26S proteasome AAA-ATPase subunit
           RPT2a (Chro.40138) partial mRNA
          Length = 1338

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                
Query: 107 gatgaagttgatcctatggtttctgtcatgaaagttgagaaggcacctttgga 159
           ||||| || |||||| |||||||||| ||||||||||| ||||| ||||||||
Sbjct: 508 gatgaggtggatcctttggtttctgtaatgaaagttgataaggctcctttgga 560

---

>gb|AF016440.2| Caenorhabditis elegans cosmid F29G9, complete sequence
          Length = 42751

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                      
Query: 452   tcaattgtcttcattgatgagattgatgcagttggaacaaa 492
             |||||||| ||||||||||| |||||||| |||||||||||
Sbjct: 16232 tcaattgtgttcattgatgaaattgatgctgttggaacaaa 16192

---

>ref|NM_072157.3| Caenorhabditis elegans F29G9.5 (ATPase) mRNA, complete cds
          Length = 1458

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                    
Query: 452 tcaattgtcttcattgatgagattgatgcagttggaacaaa 492
           |||||||| ||||||||||| |||||||| |||||||||||
Sbjct: 848 tcaattgtgttcattgatgaaattgatgctgttggaacaaa 888

---

>emb|AL115143.1|CNS01C6N Botrytis cinerea strain T4 cDNA library
          Length = 660

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                        
Query: 347 gcaacgttcttgcgtgttgttgggagtgagttgatccagaagtac 391
           ||||||||||||||  ||||||| ||||||||||| |||||||||
Sbjct: 291 gcaacgttcttgcgaattgttggtagtgagttgattcagaagtac 335

---

>ref|XM_360102.1| Magnaporthe grisea 70-15 hypothetical protein (MG05477.4) partial
           mRNA
          Length = 1380

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                   
Query: 344 tcagcaacgttcttgcgtgttgttgggagtgagttgatccagaagtaccttggtga 399
           ||||| |||||||||||  ||||||| |||||| |||||||||| || ||||||||
Sbjct: 787 tcagctacgttcttgcgcattgttggtagtgagctgatccagaaatatcttggtga 842



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 158 gagtcttatgctgacattggtggtttgga 186
           ||||||||||| |||||||||||||||||
Sbjct: 601 gagtcttatgccgacattggtggtttgga 629

---

>ref|NM_204958.1| Gallus gallus proteasome (prosome, macropain) 26S subunit, ATPase,
           1 (PSMC1), mRNA
          Length = 1440

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                       
Query: 455 attgtcttcattgatgagattgatgcagttggaacaaagaggta 498
           |||||||||||||||||||| |||||  |||| |||||||||||
Sbjct: 853 attgtcttcattgatgagatcgatgccattggtacaaagaggta 896

---

>gb|U60187.1|GGU60187 Gallus gallus 26S ATPase complex subunit 4 mRNA, complete cds
          Length = 1440

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                       
Query: 455 attgtcttcattgatgagattgatgcagttggaacaaagaggta 498
           |||||||||||||||||||| |||||  |||| |||||||||||
Sbjct: 853 attgtcttcattgatgagatcgatgccattggtacaaagaggta 896

---

>gb|BT016035.1| Drosophila melanogaster RE01104 full insert cDNA
          Length = 1442

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 446 tctccttcaattgtcttcattgatgagattgatgc 480
           |||||||||||| |||||||||||||||| |||||
Sbjct: 770 tctccttcaattatcttcattgatgagatcgatgc 804

---

>gb|DQ440313.1| Aedes aegypti clone AET-397 26S proteasome regulatory chain 4 mRNA,
           complete cds
          Length = 1317

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 78/95 (82%)
 Strand = Plus / Plus

                                                                       
Query: 447 ctccttcaattgtcttcattgatgagattgatgcagttggaacaaagaggtatgatgctc 506
           |||||||||||||||||||||| || || |||||||| || |||||  | || ||| || 
Sbjct: 827 ctccttcaattgtcttcattgacgaaatcgatgcagtaggcacaaaacgttacgattcta 886

                                              
Query: 507 attcaggtggtgagcgcgagattcagagaaccatg 541
           |||| || || || || ||||| ||||||||||||
Sbjct: 887 attccggaggagaacgtgagatccagagaaccatg 921

---

>gb|AY113319.1| Drosophila melanogaster AT28212 full insert cDNA
          Length = 1234

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 446 tctccttcaattgtcttcattgatgagattgatgc 480
           |||||||||||| |||||||||||||||| |||||
Sbjct: 617 tctccttcaattatcttcattgatgagatcgatgc 651

---

>ref|NM_169308.2| Drosophila melanogaster Rpt3R CG9475-RB, transcript variant B
           (Rpt3R), mRNA
          Length = 1371

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 446 tctccttcaattgtcttcattgatgagattgatgc 480
           |||||||||||| |||||||||||||||| |||||
Sbjct: 721 tctccttcaattatcttcattgatgagatcgatgc 755

---

>ref|NM_141681.1| Drosophila melanogaster Rpt3R CG9475-RA, transcript variant A
           (Rpt3R), mRNA
          Length = 1467

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 446 tctccttcaattgtcttcattgatgagattgatgc 480
           |||||||||||| |||||||||||||||| |||||
Sbjct: 817 tctccttcaattatcttcattgatgagatcgatgc 851

---

>gb|AC008316.3|AC008316 Drosophila melanogaster, chromosome 3R, region 85F-85F, BAC clone
             BACR23O04, complete sequence
          Length = 160817

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                
Query: 446   tctccttcaattgtcttcattgatgagattgatgc 480
             |||||||||||| |||||||||||||||| |||||
Sbjct: 29971 tctccttcaattatcttcattgatgagatcgatgc 29937

---

>gb|AC008315.9|AC008315 Drosophila melanogaster, chromosome 3R, region 85E-85E, BAC clone
              BACR30F01, complete sequence
          Length = 177028

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                 
Query: 446    tctccttcaattgtcttcattgatgagattgatgc 480
              |||||||||||| |||||||||||||||| |||||
Sbjct: 137124 tctccttcaattatcttcattgatgagatcgatgc 137090

---

>gb|AE003684.4| Drosophila melanogaster chromosome 3R, section 22 of 118 of the
             complete sequence
          Length = 214323

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                
Query: 446   tctccttcaattgtcttcattgatgagattgatgc 480
             |||||||||||| |||||||||||||||| |||||
Sbjct: 49694 tctccttcaattatcttcattgatgagatcgatgc 49660

---

>emb|CR942586.2| Xenopus tropicalis finished cDNA, clone TGas066b09
          Length = 1561

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 69/83 (83%)
 Strand = Plus / Plus

                                                                       
Query: 455 attgtcttcattgatgagattgatgcagttggaacaaagaggtatgatgctcattcaggt 514
           ||||| || |||||||||||||||||  |||| |||||||| |||||| |  |||| |||
Sbjct: 843 attgtgtttattgatgagattgatgcgattggtacaaagagatatgattccaattctggt 902

                                  
Query: 515 ggtgagcgcgagattcagagaac 537
           || || || || |||||||||||
Sbjct: 903 ggggaacgtgaaattcagagaac 925

---

>ref|NM_125854.2| Arabidopsis thaliana ATP binding / nucleoside-triphosphatase/
            nucleotide binding AT5G64580 mRNA, complete cds
          Length = 2758

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                          
Query: 459  tcttcattgatgagattgatgcagttggaa 488
            ||||||||||||||||||||||| ||||||
Sbjct: 1235 tcttcattgatgagattgatgcaattggaa 1264

---

>ref|XM_712719.1| Candida albicans SC5314 putative proteasome regulatory particle
           ATPase Rpt2p (CaO19_5440), mRNA
          Length = 1398

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 149/190 (78%)
 Strand = Plus / Plus

                                                                       
Query: 104 caagatgaagttgatcctatggtttctgtcatgaaagttgagaaggcacctttggagtct 163
           |||||||| | ||||||||||||||| || |||||| | || ||  | |||   || || 
Sbjct: 493 caagatgatgctgatcctatggtttcggtaatgaaactcgacaaatcccctacagaatca 552

                                                                       
Query: 164 tatgctgacattggtggtttggatgcccaaattcaagagatcaaagaggcagtggaactt 223
           ||||| |||||||| || |||||  | ||||||||||| ||||||||  |||| ||| | 
Sbjct: 553 tatgccgacattggggggttggaatcacaaattcaagaaatcaaagaatcagtcgaattg 612

                                                                       
Query: 224 ccgttgacacatcctgagctatacgaggacattgggatcaggcctccgaagggagtcata 283
           || ||||||||||||||  | ||||| || || || |||| |||||| || || || |||
Sbjct: 613 ccattgacacatcctgaattgtacgaagaaatgggaatcaagcctccaaaaggtgtgata 672

                     
Query: 284 ctatatgggg 293
            |||||||||
Sbjct: 673 ttatatgggg 682



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 449 ccttcaattgtcttcattgatgagattgatgcagttggaacaaagag 495
           ||||||||||| ||||||||||| || |||||  |||| ||||||||
Sbjct: 838 ccttcaattgttttcattgatgaaatcgatgccattggtacaaagag 884

---

>ref|XM_712625.1| Candida albicans SC5314 putative proteasome regulatory particle
           ATPase Rpt2p (CaO19_12895), mRNA
          Length = 1398

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 149/190 (78%)
 Strand = Plus / Plus

                                                                       
Query: 104 caagatgaagttgatcctatggtttctgtcatgaaagttgagaaggcacctttggagtct 163
           |||||||| | ||||||||||||||| || |||||| | || ||  | |||   || || 
Sbjct: 493 caagatgatgctgatcctatggtttcggtaatgaaactcgacaaatcccctacagaatca 552

                                                                       
Query: 164 tatgctgacattggtggtttggatgcccaaattcaagagatcaaagaggcagtggaactt 223
           ||||| |||||||| || |||||  | ||||||||||| ||||||||  |||| ||| | 
Sbjct: 553 tatgccgacattggggggttggaatcacaaattcaagaaatcaaagaatcagtcgaattg 612

                                                                       
Query: 224 ccgttgacacatcctgagctatacgaggacattgggatcaggcctccgaagggagtcata 283
           || ||||||||||||||  | ||||| || || || |||| |||||| || || || |||
Sbjct: 613 ccattgacacatcctgaattgtacgaagaaatgggaatcaagcctccaaaaggtgtgata 672

                     
Query: 284 ctatatgggg 293
            |||||||||
Sbjct: 673 ttatatgggg 682



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 449 ccttcaattgtcttcattgatgagattgatgcagttggaacaaagag 495
           ||||||||||| ||||||||||| || |||||  |||| ||||||||
Sbjct: 838 ccttcaattgttttcattgatgaaatcgatgccattggtacaaagag 884

---

>emb|Z93386.1|CER11H6 Caenorhabditis elegans Cosmid R11H6, complete sequence
          Length = 19383

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                           
Query: 457   tgtcttcattgatgagattgatgcagttgg 486
             ||||||||||||||| ||||||||||||||
Sbjct: 14495 tgtcttcattgatgaaattgatgcagttgg 14524

---

>gb|AF475102.1| Triticum aestivum tat binding protein mRNA, partial cds
          Length = 564

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 464 attgatgagattgatgcagttggaacaaag 493
           |||||||||||||||||| |||||||||||
Sbjct: 271 attgatgagattgatgcaattggaacaaag 300

---

>gb|AF526250.1| Chlamys farreri clone iolscfcl363ct379cn399 ribosomal protein S20
          mRNA, complete cds
          Length = 536

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                    
Query: 1  cctcgtgccgaatcggcacgagggtt 26
          ||||||||||||||||||||||||||
Sbjct: 76 cctcgtgccgaatcggcacgagggtt 51

---

>dbj|AB223595.1| Aspergillus oryzae cDNA, contig sequence: AoEST0433
          Length = 689

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 447 ctccttcaattgtcttcattgatgagattgatgc 480
           ||||||| ||||||||||||||||| ||||||||
Sbjct: 143 ctccttccattgtcttcattgatgaaattgatgc 176

---

>dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111
          Length = 2356219

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                
Query: 447    ctccttcaattgtcttcattgatgagattgatgc 480
              ||||||| ||||||||||||||||| ||||||||
Sbjct: 749420 ctccttccattgtcttcattgatgaaattgatgc 749387

---

>dbj|AB010076.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUB3
          Length = 82188

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                           
Query: 459   tcttcattgatgagattgatgcagttggaa 488
             ||||||||||||||||||||||| ||||||
Sbjct: 38841 tcttcattgatgagattgatgcaattggaa 38812

---

>gb|AY540192.1| Oreochromis mossambicus proteasome 26S ATPase subunit 1 mRNA,
           partial cds
          Length = 770

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 76/93 (81%)
 Strand = Plus / Plus

                                                                       
Query: 449 ccttcaattgtcttcattgatgagattgatgcagttggaacaaagaggtatgatgctcat 508
           |||||||| |||||||| ||||||||||| ||  | || ||||||||||| ||  || | 
Sbjct: 352 ccttcaatcgtcttcatcgatgagattgacgccatcggcacaaagaggtacgactctaac 411

                                            
Query: 509 tcaggtggtgagcgcgagattcagagaaccatg 541
           || ||||||||| | ||||| ||||| ||||||
Sbjct: 412 tccggtggtgagagggagatccagaggaccatg 444

---

>ref|XM_736668.1| Plasmodium chabaudi chabaudi 26S proteasome regulatory subunit 4
           (PC000434.02.0) partial mRNA
          Length = 882

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 449 ccttcaattgtcttcattgatgagattgatgcagttggaacaaagaggtatga 501
           ||||| ||||| || |||||||| |||||||||||||| ||||| || |||||
Sbjct: 394 ccttctattgtttttattgatgaaattgatgcagttggtacaaaaagatatga 446

---

>gb|AY620960.1| Pennisetum glaucum truncated vacuolar ATPase subunit c isoform
          mRNA, partial cds
          Length = 911

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 1  cctcgtgccgaatcggcacgagggt 25
          |||||||||||||||||||||||||
Sbjct: 11 cctcgtgccgaatcggcacgagggt 35

---

>gb|BT018175.1| Zea mays clone EL01N0557C11.c mRNA sequence
          Length = 780

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  cctcgtgccgaatcggcacgaggg 24
          ||||||||||||||||||||||||
Sbjct: 9  cctcgtgccgaatcggcacgaggg 32

---

>ref|XM_654725.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN2213.2), mRNA
          Length = 1383

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 353 ttcttgcgtgttgttgggagtgagttgatccagaagtaccttgg 396
           ||||||||  ||||||| ||||||||||| || |||||||||||
Sbjct: 796 ttcttgcgaattgttggaagtgagttgattcaaaagtaccttgg 839



 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 455 attgtcttcattgatgagattgatgc 480
           ||||||||||||||||| ||||||||
Sbjct: 898 attgtcttcattgatgaaattgatgc 923



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 296 cctggaacagggaagactctacttgcaaaggctgttgccaa 336
           |||||||| || ||||| || ||||| ||||||||||||||
Sbjct: 739 cctggaactggaaagacactgcttgccaaggctgttgccaa 779

---

>ref|XM_764056.1| Giardia lamblia ATCC 50803 26S proteasome ATPase subunit S4
           (GLP_90_16591_17934) partial mRNA
          Length = 1344

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                       
Query: 459 tcttcattgatgagattgatgcagttggaacaaagaggtatgatgctcattcaggtggtg 518
           ||||||| || ||| ||||||| || |||| |||||||||||||||  ||||||| ||||
Sbjct: 869 tcttcatcgacgaggttgatgccgtaggaagaaagaggtatgatgcagattcaggaggtg 928

---

>ref|XM_721689.1| Plasmodium yoelii yoelii str. 17XNL 26S proteasome subunit 4
           protein (PY00768) partial mRNA
          Length = 1344

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 449 ccttcaattgtcttcattgatgagattgatgcagttggaacaaa 492
           ||||| ||||| || |||||||| |||||||||||||| |||||
Sbjct: 856 ccttctattgtttttattgatgaaattgatgcagttggtacaaa 899



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 62/75 (82%)
 Strand = Plus / Plus

                                                                       
Query: 106 agatgaagttgatcctatggtttctgtcatgaaagttgagaaggcacctttggagtctta 165
           |||||||||||||||  | || ||||| ||||||||||| ||||| ||  | || || ||
Sbjct: 513 agatgaagttgatccgttagtatctgttatgaaagttgaaaaggctccactagaatcata 572

                          
Query: 166 tgctgacattggtgg 180
           |||||| ||||||||
Sbjct: 573 tgctgatattggtgg 587

---

>ref|XM_948843.1| Theileria annulata strain Ankara 26S proteasome subunit 4 (TA05950)
           partial mRNA
          Length = 1317

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 194 attcaagagatcaaagaggcagtggaacttccgttgacacatcctgagctatacga 249
           ||||||||||||||||||||||| || || ||||| |||   |||||||| |||||
Sbjct: 574 attcaagagatcaaagaggcagttgagctaccgttaacaaggcctgagctgtacga 629

---

>gb|U88170.1| Caenorhabditis elegans cosmid C10G11, complete sequence
          Length = 36795

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 455 attgtcttcattgatgagattgatgcagttgg 486
           ||||| ||||||||||| ||||||||||||||
Sbjct: 871 attgtattcattgatgaaattgatgcagttgg 840

---

>emb|AJ297368.1|GLA297368 Giardia lamblia partial s4 gene for ATPase subunit S4 of 26S
           Proteasome
          Length = 763

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                       
Query: 459 tcttcattgatgagattgatgcagttggaacaaagaggtatgatgctcattcaggtggtg 518
           ||||||| || ||| ||||||| || |||| |||||||||||||||  ||||||| ||||
Sbjct: 269 tcttcatcgacgaggttgatgccgtaggaagaaagaggtatgatgcagattcaggaggtg 328

---

>dbj|AB228520.1| Aspergillus oryzae cDNA, contig sequence: AoEST5393
          Length = 731

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  cctcgtgccgaatcggcacgaggg 24
          ||||||||||||||||||||||||
Sbjct: 1  cctcgtgccgaatcggcacgaggg 24

---

>gb|AY057456.1| Stizostedion vitreum clone C1-3 major histocompatibility class I
            receptor mRNA, complete cds
          Length = 1293

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 1    cctcgtgccgaatcggcacgaggg 24
            ||||||||||||||||||||||||
Sbjct: 1089 cctcgtgccgaatcggcacgaggg 1112

---

>ref|NM_059410.2| Caenorhabditis elegans C10G11.8 (ATPase) mRNA, complete cds
          Length = 1398

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 455 attgtcttcattgatgagattgatgcagttgg 486
           ||||| ||||||||||| ||||||||||||||
Sbjct: 905 attgtattcattgatgaaattgatgcagttgg 936

---

>ref|NM_114573.2| Arabidopsis thaliana FTSH7; ATP-dependent peptidase/ ATPase/
            metallopeptidase AT3G47060 (FTSH7) mRNA, complete cds
          Length = 2776

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                               
Query: 299  ggaacagggaagactctacttgcaaaggctgttgc 333
            ||||||||||| || || |||||||||||||||||
Sbjct: 1116 ggaacagggaaaacccttcttgcaaaggctgttgc 1150

---

>gb|AY551094.1| Crassostrea gigas cavortin mRNA, complete cds
          Length = 778

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                 
Query: 1  cctcgtgccgaatcggcacgagg 23
          |||||||||||||||||||||||
Sbjct: 23 cctcgtgccgaatcggcacgagg 1

---

>gb|BT016708.1| Zea mays clone Contig541 mRNA sequence
          Length = 1331

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 1  cctcgtgccgaatcggcacgagg 23
          |||||||||||||||||||||||
Sbjct: 10 cctcgtgccgaatcggcacgagg 32

---

>gb|BT018602.1| Zea mays clone EL01N0449E02.d mRNA sequence
          Length = 1546

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 1    cctcgtgccgaatcggcacgagg 23
            |||||||||||||||||||||||
Sbjct: 1116 cctcgtgccgaatcggcacgagg 1138



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 1    cctcgtgccgaatcggcacgaggg 24
            ||||||||||| ||||||||||||
Sbjct: 1138 cctcgtgccgattcggcacgaggg 1115

---

>gb|BT016274.1| Zea mays clone Contig107 mRNA sequence
          Length = 1486

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 1   cctcgtgccgaatcggcacgagg 23
           |||||||||||||||||||||||
Sbjct: 474 cctcgtgccgaatcggcacgagg 496

---

>gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 5, complete
              sequence
          Length = 1507550

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                 
Query: 191    caaattcaagagatcaaagaggcagtggaacttcc 225
              ||||||||||| ||||||||| |||| ||||||||
Sbjct: 858498 caaattcaagaaatcaaagagtcagttgaacttcc 858532

---

>gb|AY857765.1| Triticum monococcum glyceraldehyde-3-phosphate dehydrogenase
          (GPD1) mRNA, partial cds
          Length = 630

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 1  cctcgtgccgaatcggcacgagg 23
          |||||||||||||||||||||||
Sbjct: 1  cctcgtgccgaatcggcacgagg 23

---

>gb|AY190742.1| Pagrus major 40S ribosomal protein S15A mRNA, complete cds
          Length = 568

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 1   cctcgtgccgaatcggcacgagg 23
           |||||||||||||||||||||||
Sbjct: 84  cctcgtgccgaatcggcacgagg 106

---

>gb|BT015300.1| Drosophila melanogaster AT22779 full insert cDNA
          Length = 1541

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 1  cctcgtgccgaatcggcacgagg 23
          |||||||||||||||||||||||
Sbjct: 1  cctcgtgccgaatcggcacgagg 23

---

>gb|AY549572.1| Chlamydomonas reinhardtii mitochondrial NADH:ubiquinone
          oxidoreductase 10 kDa subunit precursor mRNA, complete
          cds; nuclear gene for mitochondrial product
          Length = 868

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 1  cctcgtgccgaatcggcacgagg 23
          |||||||||||||||||||||||
Sbjct: 8  cctcgtgccgaatcggcacgagg 30

---

>ref|XM_570849.1| Cryptococcus neoformans var. neoformans JEC21 endopeptidase
           (CNE03020) partial mRNA
          Length = 1436

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 191 caaattcaagagatcaaagaggcagtggaacttcc 225
           ||||||||||| ||||||||| |||| ||||||||
Sbjct: 635 caaattcaagaaatcaaagagtcagttgaacttcc 669

---

>ref|XM_648741.1| Entamoeba histolytica HM-1:IMSS 26S proteasome subunit P45 family
           protein (71.t00014) partial mRNA
          Length = 1233

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                      
Query: 455 attgtcttcattgatgagattgatgcagttggaacaaagaggtatgatgctcattcagg 513
           ||||| || |||||||| |||||||| ||||| || ||  | |||||||||||||||||
Sbjct: 751 attgtttttattgatgaaattgatgctgttggtactaaacgttatgatgctcattcagg 809

---

>gb|AY223112.1| Schistosoma japonicum clone ZZD1382 mRNA sequence
          Length = 1276

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                 
Query: 1  cctcgtgccgaatcggcacgagg 23
          |||||||||||||||||||||||
Sbjct: 23 cctcgtgccgaatcggcacgagg 1



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 1  cctcgtgccgaatcggcacgaggg 24
          ||||||||||| ||||||||||||
Sbjct: 1  cctcgtgccgattcggcacgaggg 24

---

>gb|AY222865.1| Schistosoma japonicum clone ZZD1198 mRNA sequence
          Length = 711

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 1  cctcgtgccgaatcggcacgagg 23
          |||||||||||||||||||||||
Sbjct: 1  cctcgtgccgaatcggcacgagg 23

---

>ref|XM_667923.1| Plasmodium berghei strain ANKA 26S proteasome regulatory subunit 4
           (PB000601.02.0) partial mRNA
          Length = 867

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 62/75 (82%)
 Strand = Plus / Plus

                                                                       
Query: 106 agatgaagttgatcctatggtttctgtcatgaaagttgagaaggcacctttggagtctta 165
           |||||||||||||||  | || ||||| ||||||||||| ||||| || || || || ||
Sbjct: 495 agatgaagttgatccgttagtatctgttatgaaagttgaaaaggccccattagaatcata 554

                          
Query: 166 tgctgacattggtgg 180
            ||||| ||||||||
Sbjct: 555 cgctgatattggtgg 569

---

>emb|AJ619759.1| Polytomella sp. Pringsheim 198.80 mitochondrial atp3 gene for ATP
          synthase gamma chain, mitochondrial precursor
          Length = 1225

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 1  cctcgtgccgaatcggcacgagg 23
          |||||||||||||||||||||||
Sbjct: 10 cctcgtgccgaatcggcacgagg 32

---

>emb|Z29366.1|SPMTS2MR S.pombe(972) mts2 mRNA for 26S protease subunit
          Length = 1518

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 191 caaattcaagagatcaaagaggc 213
           |||||||||||||||||||||||
Sbjct: 644 caaattcaagagatcaaagaggc 666

---

>gb|BT000368.1| Arabidopsis thaliana FtsH metalloprotease-like protein (At3g47060)
            mRNA, complete cds
          Length = 2481

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                               
Query: 299  ggaacagggaagactctacttgcaaaggctgttgc 333
            ||||||||||| || || |||||||||||||||||
Sbjct: 1102 ggaacagggaaaacccttcttgcaaaggctgttgc 1136

---

>ref|NM_001015906.2| Xenopus tropicalis AFG3(ATPase family gene 3)-like 1 (yeast)
            (afg3l1), mRNA
          Length = 2845

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 464  attgatgagattgatgcagttgg 486
            |||||||||||||||||||||||
Sbjct: 1205 attgatgagattgatgcagttgg 1227



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 305  gggaagactctacttgcaaaggct 328
            ||||||||||| ||||||||||||
Sbjct: 1046 gggaagactcttcttgcaaaggct 1069

---

>emb|AL133292.3|ATF13I12 Arabidopsis thaliana DNA chromosome 3, BAC clone F13I12
          Length = 140680

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 299   ggaacagggaagactctacttgcaaaggctgttgc 333
             ||||||||||| || || |||||||||||||||||
Sbjct: 51961 ggaacagggaaaacccttcttgcaaaggctgttgc 51995

---

>emb|AL121863.1|SPBC4 S.pombe chromosome II cosmid c4
          Length = 16037

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 191   caaattcaagagatcaaagaggc 213
             |||||||||||||||||||||||
Sbjct: 14619 caaattcaagagatcaaagaggc 14597

---

>gb|AY122071.1| Drosophila melanogaster AT15262 full insert cDNA
          Length = 1224

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                 
Query: 1  cctcgtgccgaatcggcacgagg 23
          |||||||||||||||||||||||
Sbjct: 23 cctcgtgccgaatcggcacgagg 1

---

>gb|AY113216.1| Drosophila melanogaster AT07420 full insert cDNA
          Length = 1395

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 1  cctcgtgccgaatcggcacgagg 23
          |||||||||||||||||||||||
Sbjct: 1  cctcgtgccgaatcggcacgagg 23

---

>gb|AY099737.1| Arabidopsis thaliana FtsH metalloprotease-like protein (At3g47060)
            mRNA, complete cds
          Length = 2776

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                               
Query: 299  ggaacagggaagactctacttgcaaaggctgttgc 333
            ||||||||||| || || |||||||||||||||||
Sbjct: 1116 ggaacagggaaaacccttcttgcaaaggctgttgc 1150

---

>gb|AE010283.1| Pyrococcus furiosus DSM 3638, section 158 of 173 of the complete
            genome
          Length = 10991

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 459  tcttcattgatgagattgatgca 481
            |||||||||||||||||||||||
Sbjct: 2713 tcttcattgatgagattgatgca 2691

---

>ref|XM_628150.1| Cryptosporidium parvum Iowa II predicted AFG1 ATpase family AAA
            ATpase (cgd1_3360), partial mRNA
          Length = 2160

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                   
Query: 455  attgtcttcattgatgagattgatgcagttggaacaaag 493
            ||||| || |||||||| |||||||||||||||| ||||
Sbjct: 1060 attgtttttattgatgaaattgatgcagttggaagaaag 1098

---

>ref|NM_001021391.1| Schizosaccharomyces pombe 972h- 19S proteasome regulatory protein
           (SPBC4.07c), partial mRNA
          Length = 1347

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 191 caaattcaagagatcaaagaggc 213
           |||||||||||||||||||||||
Sbjct: 595 caaattcaagagatcaaagaggc 617

---

>gb|AF309805.1|AF309805 Pneumocystis carinii f. sp. carinii glutathione synthetase Gsh1 (gsh1)
             gene, partial cds; putative a-factor pheromone receptor
             Ste3 (ste3) gene, complete cds, alternatively spliced; and
             Ydr124wp-like protein, helix-loop-helix DNA binding
             protein, Yer049wp-like protein, protein kinase Ste20
             (ste20), putative sucrose carrier Sca1 (sca1), putative
             Na+/H+ exchanger Nhx1 (nhx1), putative 26S protease
             regulatory subunit 4 (mts2), hypothetical protein, glycyl
             tRNA synthetase, and coiled-coil protein genes, complete
             cds
          Length = 32083

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                                
Query: 191   caaattcaagagatcaaagaggcagtggaacttccgttgacacatcctgag 241
             ||||||||||||||||||||| | || ||| | || || ||||||||||||
Sbjct: 21385 caaattcaagagatcaaagagacggtagaattgccattaacacatcctgag 21435

---

>gb|AY967593.1| Schmidtea mediterranea clone NBE.3.05B mRNA sequence
          Length = 999

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                          
Query: 455 attgtcttcattgatgagattgatgcagttggaacaaagaggtatga 501
           ||||| || |||||||| || ||||||||||||||||| || |||||
Sbjct: 528 attgtttttattgatgaaatcgatgcagttggaacaaaaagatatga 482

---

>gb|AF304353.1|AF304353 Lampetra fluviatilis endophilin SH3p4 mRNA, complete cds
          Length = 1337

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 2    ctcgtgccgaatcggcacgaggg 24
            |||||||||||||||||||||||
Sbjct: 1274 ctcgtgccgaatcggcacgaggg 1252

---

>gb|BC002907.2| Homo sapiens hypothetical protein FLJ20512, mRNA (cDNA clone
          MGC:10300 IMAGE:3941377), complete cds
          Length = 707

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 1  cctcgtgccgaatcggcacgagg 23
          |||||||||||||||||||||||
Sbjct: 1  cctcgtgccgaatcggcacgagg 23

---

>gb|BC002897.2| Homo sapiens zinc finger protein 343, mRNA (cDNA clone
          IMAGE:3940750), complete cds
          Length = 847

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                 
Query: 1  cctcgtgccgaatcggcacgagg 23
          |||||||||||||||||||||||
Sbjct: 23 cctcgtgccgaatcggcacgagg 1

---

>gb|AY849619.1| Magnaporthe grisea transporter-like protein mRNA, complete cds
          Length = 1770

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                 
Query: 1  cctcgtgccgaatcggcacgagg 23
          |||||||||||||||||||||||
Sbjct: 24 cctcgtgccgaatcggcacgagg 2

---

>emb|CR926435.2| Xenopus tropicalis finished cDNA, clone TTpA010o23
          Length = 2845

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 464  attgatgagattgatgcagttgg 486
            |||||||||||||||||||||||
Sbjct: 1205 attgatgagattgatgcagttgg 1227



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 305  gggaagactctacttgcaaaggct 328
            ||||||||||| ||||||||||||
Sbjct: 1046 gggaagactcttcttgcaaaggct 1069

---

>gb|AY609483.1| Sus scrofa clone Clu_131.scr.msk.p1.Contig2, mRNA sequence
          Length = 1502

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 1    cctcgtgccgaatcggcacgagg 23
            |||||||||||||||||||||||
Sbjct: 1420 cctcgtgccgaatcggcacgagg 1398

---

>ref|NM_125277.2| Arabidopsis thaliana FTSH9; ATP-dependent peptidase/ ATPase/
            metallopeptidase AT5G58870 (FTSH9) mRNA, complete cds
          Length = 2750

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                  
Query: 296  cctggaacagggaagactctacttgcaaaggctgttgc 333
            |||||||||||||| || || |||||||| ||||||||
Sbjct: 1172 cctggaacagggaaaacccttcttgcaaaagctgttgc 1209

---

>ref|NM_121529.1| Arabidopsis thaliana FTSH6; ATP-dependent peptidase/ ATPase/
           metallopeptidase AT5G15250 (FTSH6) mRNA, complete cds
          Length = 2064

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 461 ttcattgatgagattgatgcagttgg 486
           |||||||||||||||||||| |||||
Sbjct: 958 ttcattgatgagattgatgctgttgg 983

---

>ref|XM_641634.1| Dictyostelium discoideum hypothetical protein (DDB0202018), partial
           mRNA
          Length = 1320

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 70/86 (81%)
 Strand = Plus / Plus

                                                                       
Query: 452 tcaattgtcttcattgatgagattgatgcagttggaacaaagaggtatgatgctcattca 511
           |||||||| ||||||||||| || ||||| ||||| || ||  | |||||| |||| || 
Sbjct: 835 tcaattgttttcattgatgaaatcgatgctgttggtaccaaacgttatgattctcaatct 894

                                     
Query: 512 ggtggtgagcgcgagattcagagaac 537
           |||||||| || || ||||| |||||
Sbjct: 895 ggtggtgaacgtgaaattcaaagaac 920



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 71/88 (80%)
 Strand = Plus / Plus

                                                                       
Query: 176 ggtggtttggatgcccaaattcaagagatcaaagaggcagtggaacttccgttgacacat 235
           ||||||||||| || ||| |||||||||| ||||| ||  | ||| | || ||||| |||
Sbjct: 559 ggtggtttggaagcacaagttcaagagatgaaagaagccatcgaattgccattgactcat 618

                                       
Query: 236 cctgagctatacgaggacattgggatca 263
           || ||||| || ||||| ||||| ||||
Sbjct: 619 ccagagctctatgaggagattggtatca 646

---

>gb|BC005783.1| Mus musculus proteasome (prosome, macropain) 26S subunit, ATPase 3,
           mRNA (cDNA clone MGC:12017 IMAGE:3603053), complete cds
          Length = 1534

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 296 cctggaacagggaagactctacttgc 321
           |||||||||||||||||||| |||||
Sbjct: 815 cctggaacagggaagactctgcttgc 840

---

>gb|BT015177.1| Drosophila melanogaster SD19814 full insert cDNA
          Length = 5154

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 1  cctcgtgccgaatcggcacgag 22
          ||||||||||||||||||||||
Sbjct: 22 cctcgtgccgaatcggcacgag 1

---

>gb|AE017261.1| Picrophilus torridus DSM 9790, complete genome
          Length = 1545895

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                    
Query: 296    cctggaacagggaagactctacttgcaaaggctgttgc 333
              |||||||| || ||||| || |||||||||||||||||
Sbjct: 480735 cctggaacgggcaagacgctccttgcaaaggctgttgc 480698

---

>ref|NM_008948.1| Mus musculus proteasome (prosome, macropain) 26S subunit, ATPase 3
           (Psmc3), mRNA
          Length = 1569

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 296 cctggaacagggaagactctacttgc 321
           |||||||||||||||||||| |||||
Sbjct: 870 cctggaacagggaagactctgcttgc 895

---

>gb|BC043056.1| Mus musculus AFG3(ATPase family gene 3)-like 2 (yeast), mRNA (cDNA
            clone MGC:57959 IMAGE:6419521), complete cds
          Length = 3086

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 459  tcttcattgatgagattgatgc 480
            ||||||||||||||||||||||
Sbjct: 1343 tcttcattgatgagattgatgc 1364

---

>gb|BC036999.1| Mus musculus AFG3(ATPase family gene 3)-like 2 (yeast), mRNA (cDNA
            clone MGC:47048 IMAGE:5042649), complete cds
          Length = 3116

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 459  tcttcattgatgagattgatgc 480
            ||||||||||||||||||||||
Sbjct: 1387 tcttcattgatgagattgatgc 1408

---

>gb|BC021380.1| Mus musculus AFG3(ATPase family gene 3)-like 2 (yeast), mRNA (cDNA
            clone IMAGE:5043529), containing frame-shift errors
          Length = 3069

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 459  tcttcattgatgagattgatgc 480
            ||||||||||||||||||||||
Sbjct: 1340 tcttcattgatgagattgatgc 1361

---

>ref|XM_001000481.1| PREDICTED: Mus musculus AFG3(ATPase family gene 3)-like 2 (yeast)
            (Afg3l2), mRNA
          Length = 2376

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 459  tcttcattgatgagattgatgc 480
            ||||||||||||||||||||||
Sbjct: 1175 tcttcattgatgagattgatgc 1196

---

>ref|XM_128950.7| PREDICTED: Mus musculus AFG3(ATPase family gene 3)-like 2 (yeast)
            (Afg3l2), mRNA
          Length = 2376

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 459  tcttcattgatgagattgatgc 480
            ||||||||||||||||||||||
Sbjct: 1175 tcttcattgatgagattgatgc 1196

---

>gb|BC060064.1| Mus musculus AFG3(ATPase family gene 3)-like 1 (yeast), mRNA (cDNA
            clone IMAGE:6418748), containing frame-shift errors
          Length = 2887

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 461  ttcattgatgagattgatgcagttgg 486
            ||||||||||||||||||||| ||||
Sbjct: 1196 ttcattgatgagattgatgcaattgg 1221

---

>gb|AC158362.5| Mus musculus BAC clone RP23-214K5 from chromosome 8, complete sequence
          Length = 201185

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 461   ttcattgatgagattgatgcagttgg 486
             ||||||||||||||||||||| ||||
Sbjct: 38284 ttcattgatgagattgatgcaattgg 38259

---

>gb|DQ446953.1| Arabidopsis thaliana clone pENTR221-At5g15250 FtsH protease
           (At5g15250) mRNA, complete cds
          Length = 2067

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 461 ttcattgatgagattgatgcagttgg 486
           |||||||||||||||||||| |||||
Sbjct: 961 ttcattgatgagattgatgctgttgg 986

---

>gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome
          Length = 2575032

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 461     ttcattgatgagattgatgcagttgg 486
               |||||||||||||| |||||||||||
Sbjct: 2428303 ttcattgatgagatcgatgcagttgg 2428278

---

>emb|AL591974.1| Listeria monocytogenes strain EGD, complete genome, segment 2/12
          Length = 160050

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 461   ttcattgatgagattgatgcagttgg 486
             ||||||||||| ||||||||||||||
Sbjct: 27682 ttcattgatgaaattgatgcagttgg 27707

---

>emb|AL596164.1| Listeria innocua Clip11262 complete genome, segment 2/12
          Length = 224650

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 461   ttcattgatgagattgatgcagttgg 486
             ||||||||||| ||||||||||||||
Sbjct: 19344 ttcattgatgaaattgatgcagttgg 19369

---

>emb|AL590447.1|CNS07EGE chromosome VII of strain GB-M1 of Encephalitozoon cuniculi (Microspora)
          Length = 226576

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                    
Query: 296    cctggaacagggaagactctacttgcaaaggctgttgc 333
              |||||||||||||||||||| || || ||||| |||||
Sbjct: 194342 cctggaacagggaagactctcctagccaaggccgttgc 194379

---

>emb|AL353993.1|ATF8M21 Arabidopsis thaliana DNA chromosome 5, BAC clone F8M21 (ESSA project)
          Length = 103996

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 461   ttcattgatgagattgatgcagttgg 486
             |||||||||||||||||||| |||||
Sbjct: 55660 ttcattgatgagattgatgctgttgg 55635

---

>emb|AJ420188.1|FSY420188 Fagus sylvatica partial mRNA for ACC synthase 1.1 (acs1.1 gene)
          Length = 941

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 2  ctcgtgccgaatcggcacgagg 23
          ||||||||||||||||||||||
Sbjct: 1  ctcgtgccgaatcggcacgagg 22

---

>gb|BC056978.1| Mus musculus AFG3(ATPase family gene 3)-like 1 (yeast), mRNA (cDNA
            clone MGC:66836 IMAGE:6821746), complete cds
          Length = 4243

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 461  ttcattgatgagattgatgcagttgg 486
            ||||||||||||||||||||| ||||
Sbjct: 1196 ttcattgatgagattgatgcaattgg 1221

---

>gb|AC154125.7| Mus musculus chromosome 18, clone RP23-121M18, complete sequence
          Length = 207258

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 459   tcttcattgatgagattgatgc 480
             ||||||||||||||||||||||
Sbjct: 58952 tcttcattgatgagattgatgc 58973

---

>emb|AJ505009.1|DLA505009 Dicentrarchus labrax partially processed transcript RNA for
          oestrogen receptor alpha (ERalpha gene)
          Length = 3812

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 2  ctcgtgccgaatcggcacgagg 23
          ||||||||||||||||||||||
Sbjct: 31 ctcgtgccgaatcggcacgagg 10

---

>dbj|AB236766.1| Trifolium pratense RNA for putative DEAD-box protein abstrakt,
          complete cds, clone: C1562
          Length = 2301

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 1  cctcgtgccgaatcggcacgagggtt 26
          ||||||||||||| ||||||||||||
Sbjct: 23 cctcgtgccgaattggcacgagggtt 48

---

>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome
          Length = 2696255

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 458    gtcttcattgatgagattgatgcagttgga 487
              |||||||| |||||||| ||||||||||||
Sbjct: 614396 gtcttcatcgatgagatcgatgcagttgga 614367

---

>dbj|AK149970.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched
            library, clone:G530110M11 product:AFG3(ATPase family gene
            3)-like 2 (yeast), full insert sequence
          Length = 3026

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 459  tcttcattgatgagattgatgc 480
            ||||||||||||||||||||||
Sbjct: 1315 tcttcattgatgagattgatgc 1336

---

>dbj|AK152018.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
           enriched library, clone:I830045E17 product:proteasome
           (prosome, macropain) 26S subunit, ATPase 3, full insert
           sequence
          Length = 1370

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 296 cctggaacagggaagactctacttgc 321
           |||||||||||||||||||| |||||
Sbjct: 665 cctggaacagggaagactctgcttgc 690

---

>dbj|AK152727.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched
            library, clone:I830083E10 product:AFG3(ATPase family gene
            3)-like 2 (yeast), full insert sequence
          Length = 3086

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 459  tcttcattgatgagattgatgc 480
            ||||||||||||||||||||||
Sbjct: 1374 tcttcattgatgagattgatgc 1395

---

>dbj|AK151370.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
           enriched library, clone:I830028L03 product:proteasome
           (prosome, macropain) 26S subunit, ATPase 3, full insert
           sequence
          Length = 1352

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 296 cctggaacagggaagactctacttgc 321
           |||||||||||||||||||| |||||
Sbjct: 646 cctggaacagggaagactctgcttgc 671

---

>dbj|AK164537.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched
            library, clone:D330034J01 product:AFG3(ATPase family gene
            3)-like 2 (yeast), full insert sequence
          Length = 3100

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 459  tcttcattgatgagattgatgc 480
            ||||||||||||||||||||||
Sbjct: 1384 tcttcattgatgagattgatgc 1405

---

>dbj|AK152115.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched
            library, clone:I830047O12 product:AFG3(ATPase family gene
            3)-like 2 (yeast), full insert sequence
          Length = 3086

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 459  tcttcattgatgagattgatgc 480
            ||||||||||||||||||||||
Sbjct: 1374 tcttcattgatgagattgatgc 1395

---

>dbj|AK151207.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched
            library, clone:I830026N09 product:AFG3(ATPase family gene
            3)-like 2 (yeast), full insert sequence
          Length = 3073

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 459  tcttcattgatgagattgatgc 480
            ||||||||||||||||||||||
Sbjct: 1364 tcttcattgatgagattgatgc 1385

---

>dbj|AK150189.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
           enriched library, clone:G530142L01 product:proteasome
           (prosome, macropain) 26S subunit, ATPase 3, full insert
           sequence
          Length = 1220

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 296 cctggaacagggaagactctacttgc 321
           |||||||||||||||||||| |||||
Sbjct: 862 cctggaacagggaagactctgcttgc 887

---

>dbj|AK168668.1| Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched
            library, clone:I920043E21 product:AFG3(ATPase family gene
            3)-like 2 (yeast), full insert sequence
          Length = 3114

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 459  tcttcattgatgagattgatgc 480
            ||||||||||||||||||||||
Sbjct: 1403 tcttcattgatgagattgatgc 1424

---

>dbj|AK168616.1| Mus musculus 17 days pregnant adult female amnion cDNA, RIKEN
           full-length enriched library, clone:I920038K15
           product:proteasome (prosome, macropain) 26S subunit,
           ATPase 3, full insert sequence
          Length = 1349

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 296 cctggaacagggaagactctacttgc 321
           |||||||||||||||||||| |||||
Sbjct: 646 cctggaacagggaagactctgcttgc 671

---

>gb|AY059856.1| Arabidopsis thaliana cell division protein FtsH (K19M22.7) mRNA,
            complete cds
          Length = 2751

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                  
Query: 296  cctggaacagggaagactctacttgcaaaggctgttgc 333
            |||||||||||||| || || |||||||| ||||||||
Sbjct: 1172 cctggaacagggaaaacccttcttgcaaaagctgttgc 1209

---

>dbj|AK159647.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched
            library, clone:I420027B15 product:AFG3(ATPase family gene
            3)-like 1 (yeast), full insert sequence
          Length = 2983

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 461  ttcattgatgagattgatgcagttgg 486
            ||||||||||||||||||||| ||||
Sbjct: 1201 ttcattgatgagattgatgcaattgg 1226

---

>dbj|AK168263.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library,
           clone:I730073O13 product:proteasome (prosome, macropain)
           26S subunit, ATPase 3, full insert sequence
          Length = 1298

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 296 cctggaacagggaagactctacttgc 321
           |||||||||||||||||||| |||||
Sbjct: 595 cctggaacagggaagactctgcttgc 620

---

>dbj|AK168244.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library,
            clone:I730071E11 product:AFG3(ATPase family gene 3)-like
            1 (yeast), full insert sequence
          Length = 2386

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 461  ttcattgatgagattgatgcagttgg 486
            ||||||||||||||||||||| ||||
Sbjct: 1211 ttcattgatgagattgatgcaattgg 1236

---

>dbj|AK167061.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched
           library, clone:I1C0029C15 product:proteasome (prosome,
           macropain) 26S subunit, ATPase 3, full insert sequence
          Length = 1577

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 296 cctggaacagggaagactctacttgc 321
           |||||||||||||||||||| |||||
Sbjct: 871 cctggaacagggaagactctgcttgc 896

---

>dbj|AK167964.1| Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-length enriched
            library, clone:I730043J12 product:AFG3(ATPase family gene
            3)-like 1 (yeast), full insert sequence
          Length = 2503

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 461  ttcattgatgagattgatgcagttgg 486
            ||||||||||||||||||||| ||||
Sbjct: 1212 ttcattgatgagattgatgcaattgg 1237

---

>dbj|AK167002.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched
           library, clone:I1C0027D13 product:proteasome (prosome,
           macropain) 26S subunit, ATPase 3, full insert sequence
          Length = 1573

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 296 cctggaacagggaagactctacttgc 321
           |||||||||||||||||||| |||||
Sbjct: 874 cctggaacagggaagactctgcttgc 899

---

>gb|AF329695.1|AF329695 Mus musculus ATP-dependent zinc metalloprotease (Afg3l1) mRNA,
            complete cds; nuclear gene for mitochondrial product
          Length = 2479

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 461  ttcattgatgagattgatgcagttgg 486
            ||||||||||||||||||||| ||||
Sbjct: 1178 ttcattgatgagattgatgcaattgg 1203

---

>dbj|AK006708.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:1700047G05 product:AFG3(ATPase family
           gene 3)-like 1 (yeast), full insert sequence
          Length = 1800

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 461 ttcattgatgagattgatgcagttgg 486
           ||||||||||||||||||||| ||||
Sbjct: 528 ttcattgatgagattgatgcaattgg 553

---

>gb|AY050236.1| Drosophila melanogaster SD02116 full length cDNA
          Length = 2338

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 1  cctcgtgccgaatcggcacgag 22
          ||||||||||||||||||||||
Sbjct: 22 cctcgtgccgaatcggcacgag 1

---

>dbj|AK080118.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length
            enriched library, clone:A530064L23 product:AFG3-LIKE
            PROTEIN 2 (EC 3.4.24.-) (PARAPLEGIN-LIKE PROTEIN) homolog
            [Homo sapiens], full insert sequence
          Length = 3462

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 459  tcttcattgatgagattgatgc 480
            ||||||||||||||||||||||
Sbjct: 2378 tcttcattgatgagattgatgc 2399

---

>dbj|AK002542.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched
           library, clone:0610011H11 product:proteasome (prosome,
           macropain) 26S subunit, ATPase 3, full insert sequence
          Length = 1353

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 296 cctggaacagggaagactctacttgc 321
           |||||||||||||||||||| |||||
Sbjct: 647 cctggaacagggaagactctgcttgc 672

---

>dbj|AK083043.1| Mus musculus 12 days embryo spinal cord cDNA, RIKEN full-length
           enriched library, clone:C530037H08 product:proteasome
           (prosome, macropain) 26S subunit, ATPase 3, full insert
           sequence
          Length = 1822

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 296 cctggaacagggaagactctacttgc 321
           |||||||||||||||||||| |||||
Sbjct: 888 cctggaacagggaagactctgcttgc 913

---

>gb|AC141881.4| Mus musculus BAC clone RP24-226C9 from chromosome 8, complete sequence
          Length = 142803

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 461    ttcattgatgagattgatgcagttgg 486
              ||||||||||||||||||||| ||||
Sbjct: 130793 ttcattgatgagattgatgcaattgg 130768

---

>gb|BC043320.1| Mus musculus AFG3(ATPase family gene 3)-like 1 (yeast), mRNA (cDNA
           clone IMAGE:5365107), containing frame-shift errors
          Length = 1760

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 461 ttcattgatgagattgatgcagttgg 486
           ||||||||||||||||||||| ||||
Sbjct: 59  ttcattgatgagattgatgcaattgg 84

---

>dbj|AB040858.2| Mus musculus TBP1/PSMC3 gene for proteasomal ATPase, complete cds
          Length = 2669

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 296  cctggaacagggaagactctacttgc 321
            |||||||||||||||||||| |||||
Sbjct: 1470 cctggaacagggaagactctgcttgc 1495

---

>ref|XM_341714.2| PREDICTED: Rattus norvegicus AFG3(ATPase family gene 3)-like 1
            (yeast) (predicted) (Afg3l1_predicted), mRNA
          Length = 2605

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 461  ttcattgatgagattgatgcagttgg 486
            ||||||||||||||||||||| ||||
Sbjct: 1196 ttcattgatgagattgatgcaattgg 1221

---

>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome
          Length = 3573470

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 459     tcttcattgatgagattgatgc 480
               ||||||||||||||||||||||
Sbjct: 2529811 tcttcattgatgagattgatgc 2529832

---

>dbj|AK208850.1| Mus musculus cDNA, clone:Y2G0112P12, strand:minus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000025408, based on BLAT search
          Length = 382

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 459 tcttcattgatgagattgatgc 480
           ||||||||||||||||||||||
Sbjct: 344 tcttcattgatgagattgatgc 365

---

>dbj|AB016885.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K19M22
          Length = 77758

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 296   cctggaacagggaagactctacttgcaaaggctgttgc 333
             |||||||||||||| || || |||||||| ||||||||
Sbjct: 25132 cctggaacagggaaaacccttcttgcaaaagctgttgc 25095

---

>gb|AY902337.1| Mus musculus strain CAST/EiJ proteasome (prosome, macropain) 26S
           subunit, ATPase 3 (Psmc3) gene, complete cds
          Length = 1426

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 296 cctggaacagggaagactctacttgc 321
           |||||||||||||||||||| |||||
Sbjct: 772 cctggaacagggaagactctgcttgc 797

---

>gb|BT020983.1| Bos taurus proteasome (prosome, macropain) 26S subunit, ATPase, 1
           (PSMC1), mRNA, complete cds
          Length = 1534

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 79/98 (80%)
 Strand = Plus / Plus

                                                                       
Query: 383 cagaagtaccttggtgacggccctaagcttgtaagggaactgtttagggtggctgatgat 442
           ||||||||||| || |||||||| ||||| ||  ||||||||||| | || ||||| || 
Sbjct: 792 cagaagtacctgggcgacggccccaagctcgttcgggaactgtttcgagtcgctgaagaa 851

                                                 
Query: 443 ctgtctccttcaattgtcttcattgatgagattgatgc 480
           |   | || || |||||||| |||||||| ||||||||
Sbjct: 852 cacgcaccatccattgtctttattgatgaaattgatgc 889

---

>gb|AF049750.1|AF049750 Monodelphis domestica ModoVL10c Ig lambda light chain (Igl@)
          mRNA, complete cds
          Length = 775

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 1  cctcgtgccgaatcggcacgag 22
          ||||||||||||||||||||||
Sbjct: 30 cctcgtgccgaatcggcacgag 9

---

>ref|NM_054070.2| Mus musculus AFG3(ATPase family gene 3)-like 1 (yeast) (Afg3l1), mRNA
          Length = 4243

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 461  ttcattgatgagattgatgcagttgg 486
            ||||||||||||||||||||| ||||
Sbjct: 1196 ttcattgatgagattgatgcaattgg 1221

---

>ref|NM_001014855.1| Bos taurus proteasome 26S ATPase subunit 1 (PSMC1), mRNA
          Length = 1534

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 79/98 (80%)
 Strand = Plus / Plus

                                                                       
Query: 383 cagaagtaccttggtgacggccctaagcttgtaagggaactgtttagggtggctgatgat 442
           ||||||||||| || |||||||| ||||| ||  ||||||||||| | || ||||| || 
Sbjct: 792 cagaagtacctgggcgacggccccaagctcgttcgggaactgtttcgagtcgctgaagaa 851

                                                 
Query: 443 ctgtctccttcaattgtcttcattgatgagattgatgc 480
           |   | || || |||||||| |||||||| ||||||||
Sbjct: 852 cacgcaccatccattgtctttattgatgaaattgatgc 889

---

>emb|AL691439.8| Mouse DNA sequence from clone RP23-263H8 on chromosome 2, complete
            sequence
          Length = 30770

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 296  cctggaacagggaagactctacttgc 321
            |||||||||||||||||||| |||||
Sbjct: 8366 cctggaacagggaagactctgcttgc 8391

---

>dbj|D49686.1| Mus musculus mRNA for Tat binding protein-1, complete cds
          Length = 1569

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 296 cctggaacagggaagactctacttgc 321
           |||||||||||||||||||| |||||
Sbjct: 870 cctggaacagggaagactctgcttgc 895

---

>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome
          Length = 2695903

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 458     gtcttcattgatgagattgatgcagttgga 487
               |||||||| |||||||| ||||||||||||
Sbjct: 1006410 gtcttcatcgatgagatcgatgcagttgga 1006439

---

>gb|AE017197.1| Rickettsia typhi str. Wilmington complete genome
          Length = 1111496

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 459    tcttcattgatgagattgatgcagt 483
              |||| ||||||||||||||||||||
Sbjct: 114072 tctttattgatgagattgatgcagt 114048

---

>gb|AC114434.4| Rattus norvegicus 1 BAC CH230-210C18 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 127883

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 415   aagggaactgtttagggtggctgat 439
             |||||||||||||| ||||||||||
Sbjct: 84244 aagggaactgtttaaggtggctgat 84220

---

>ref|XM_419391.1| PREDICTED: Gallus gallus similar to Nuclear valosin-containing
            protein-like (Nuclear VCP-like protein) (NVLp)
            (LOC421326), mRNA
          Length = 3651

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 461  ttcattgatgagattgatgca 481
            |||||||||||||||||||||
Sbjct: 1126 ttcattgatgagattgatgca 1146

---

>gb|BT014925.1| Drosophila melanogaster AT18965 full insert cDNA
          Length = 3178

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Plus

                                         
Query: 1    cctcgtgccgaat-cggcacgagggttcg 28
            ||||||||||||| |||||||||||||||
Sbjct: 2317 cctcgtgccgaattcggcacgagggttcg 2345

---

>gb|AY533301.1| Petroselinum crispum mitogen-activated protein kinase kinase 2
          (MKK2) mRNA, complete cds
          Length = 1460

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 2  ctcgtgccgaatcggcacgag 22
          |||||||||||||||||||||
Sbjct: 35 ctcgtgccgaatcggcacgag 15

---

>emb|AJ249225.1|XLA249225 Xenopus laevis mRNA for XFD-4' protein (fd-4' gene)
          Length = 2385

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 2  ctcgtgccgaatcggcacgag 22
          |||||||||||||||||||||
Sbjct: 21 ctcgtgccgaatcggcacgag 1

---

>gb|AF460237.1| Solanum tuberosum Kunitz-type enzyme inhibitor S9C11 mRNA,
          complete cds
          Length = 774

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 2  ctcgtgccgaatcggcacgag 22
          |||||||||||||||||||||
Sbjct: 21 ctcgtgccgaatcggcacgag 1

---

>emb|AJ786652.1| Pisum sativum mRNA for Ftsh-like protease (ftsh11 gene)
          Length = 2769

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 459  tcttcattgatgagattgatgcagttgga 487
            ||||||||||||| |||||||| ||||||
Sbjct: 1405 tcttcattgatgaaattgatgctgttgga 1433

---

>ref|XM_741493.1| Aspergillus fumigatus Af293 membrane-spanning ATPase (Afu4g03990)
           partial mRNA
          Length = 1260

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 455 attgtcttcattgatgagattgatgcagt 483
           |||||||||||||| ||||| ||||||||
Sbjct: 622 attgtcttcattgacgagatagatgcagt 650

---

>ref|XM_647974.1| Entamoeba histolytica HM-1:IMSS AAA family ATPase (95.t00012)
            partial mRNA
          Length = 1962

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 296  cctggaacagggaagactctacttgcaaa 324
            ||||||||||| |||||||| ||||||||
Sbjct: 1345 cctggaacaggaaagactcttcttgcaaa 1373

---

>emb|CR689180.2|CNS0FUQ0 Tetraodon nigroviridis full-length cDNA
          Length = 1478

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 260 atcaggcctccgaagggagtcatactatatggggaacctggaacagggaagac 312
           |||| |||||| ||||| ||||| || ||||||  |||||| |||||||||||
Sbjct: 644 atcaagcctccaaagggtgtcatcctgtatgggccacctggcacagggaagac 696

---

>emb|BX060993.1|CNS09J85 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC41CD06 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 1018

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 34/37 (91%), Gaps = 1/37 (2%)
 Strand = Plus / Plus

                                                
Query: 24  gttcgtcgacaagggaccagctggagccgggatgctc 60
           ||||||||||||||| ||||||||| ||||| |||||
Sbjct: 393 gttcgtcgacaaggg-ccagctggaaccgggctgctc 428

---

>emb|BX038369.1|CNS091RP Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAB2DA06 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 720

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 34/37 (91%), Gaps = 1/37 (2%)
 Strand = Plus / Minus

                                                
Query: 24  gttcgtcgacaagggaccagctggagccgggatgctc 60
           |||||||||||||| |||||||||| ||||| |||||
Sbjct: 239 gttcgtcgacaagg-accagctggaaccgggctgctc 204

---

>emb|BX019099.1|CNS08MWF Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA29AB01 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 997

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 34/37 (91%), Gaps = 1/37 (2%)
 Strand = Plus / Plus

                                                
Query: 24  gttcgtcgacaagggaccagctggagccgggatgctc 60
           |||||||||||||| |||||||||| ||||| |||||
Sbjct: 70  gttcgtcgacaagg-accagctggaaccgggctgctc 105

---

>emb|BX017976.1|CNS08M18 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA27AF10 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 949

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 34/37 (91%), Gaps = 1/37 (2%)
 Strand = Plus / Plus

                                                
Query: 24  gttcgtcgacaagggaccagctggagccgggatgctc 60
           |||||||||||||| |||||||||| ||||| |||||
Sbjct: 426 gttcgtcgacaagg-accagctggaaccgggctgctc 461

---

>emb|BX009769.1|CNS08FP9 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA15DB01 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 882

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 34/37 (91%), Gaps = 1/37 (2%)
 Strand = Plus / Plus

                                                
Query: 24  gttcgtcgacaagggaccagctggagccgggatgctc 60
           |||||||||||||| |||||||||| ||||| |||||
Sbjct: 496 gttcgtcgacaagg-accagctggaaccgggctgctc 531

---

>emb|AJ312288.1|CEL312288 Caenorhabditis elegans partial mRNA for putative transcription
          factor (ceh-43 gene)
          Length = 1039

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 2  ctcgtgccgaatcggcacgag 22
          |||||||||||||||||||||
Sbjct: 21 ctcgtgccgaatcggcacgag 1

---

>dbj|AB080201.1| Caenorhabditis elegans mRNA for C2-RGS protein, complete cds
          Length = 2427

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 2  ctcgtgccgaatcggcacgag 22
          |||||||||||||||||||||
Sbjct: 11 ctcgtgccgaatcggcacgag 31

---

>gb|AF465934.1| Elaeis oleifera DNA binding protein (DNAbp) mRNA, complete cds
          Length = 1601

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 2  ctcgtgccgaatcggcacgag 22
          |||||||||||||||||||||
Sbjct: 21 ctcgtgccgaatcggcacgag 1

---

>gb|AF456360.1|AF456360 Caenorhabditis elegans immunoglobulin domain-containing protein
          F02G3.1 mRNA, complete cds
          Length = 3261

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 2  ctcgtgccgaatcggcacgag 22
          |||||||||||||||||||||
Sbjct: 9  ctcgtgccgaatcggcacgag 29

---

>ref|XM_687589.1| PREDICTED: Danio rerio similar to AFG3 ATPase family gene 3-like 2
            (LOC564245), mRNA
          Length = 3027

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                 
Query: 459  tcttcattgatgagattgatgcagttggaacaaagag 495
            ||||||| |||||||||||||| || |||| ||||||
Sbjct: 1199 tcttcatagatgagattgatgctgtgggaagaaagag 1235

---

>ref|XM_692535.1| PREDICTED: Danio rerio similar to AFG3 ATPase family gene 3-like 2
            (LOC569168), mRNA
          Length = 3024

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                 
Query: 459  tcttcattgatgagattgatgcagttggaacaaagag 495
            ||||||| |||||||||||||| || |||| ||||||
Sbjct: 1196 tcttcatagatgagattgatgctgtgggaagaaagag 1232

---

>ref|XM_625714.1| Cryptosporidium parvum Iowa II 26S proteasome regulatory subunit S4
           like AAA ATpase (cgd4_1170), partial mRNA
          Length = 1338

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 107 gatgaagttgatcctatggtttctgtcatgaaagttgagaaggcacctttgga 159
           ||||| || |||||| | |||||||| ||||||||||| || || ||||||||
Sbjct: 508 gatgaggtggatcctttagtttctgtaatgaaagttgataaagctcctttgga 560

---

>gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete genome
          Length = 2174500

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                       
Query: 293    gaacctggaacagggaagactctacttgcaaaggctgttgc 333
              ||||||||||| || || |||||||||||||| || |||||
Sbjct: 480558 gaacctggaactggtaaaactctacttgcaaaagcagttgc 480598

---

>gb|AF343876.1|AF343876 Clonorchis sinensis proline-rich antigen mRNA, partial cds
          Length = 826

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 2  ctcgtgccgaatcggcacgag 22
          |||||||||||||||||||||
Sbjct: 21 ctcgtgccgaatcggcacgag 1

---

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                    
Query: 461     ttcattgatgagattgatgcagttggaacaaagaggt 497
               ||||||||||||||||||||  |||| || |||||||
Sbjct: 3691559 ttcattgatgagattgatgccattgggactaagaggt 3691595

---

>gb|AF302079.1|AF302079 Homo sapiens HSP22-like protein interacting protein 17 mRNA,
          complete cds
          Length = 903

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 2  ctcgtgccgaatcggcacgag 22
          |||||||||||||||||||||
Sbjct: 28 ctcgtgccgaatcggcacgag 8

---

>gb|AY074433.1| Trichosurus vulpecula clone TrvuVK172 immunoglobulin kappa light
          chain variable region mRNA, partial cds
          Length = 467

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 2  ctcgtgccgaatcggcacgag 22
          |||||||||||||||||||||
Sbjct: 26 ctcgtgccgaatcggcacgag 6

---

>gb|AY074427.1| Trichosurus vulpecula clone TrvuVK138 immunoglobulin kappa light
          chain variable region mRNA, partial cds
          Length = 467

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 2  ctcgtgccgaatcggcacgag 22
          |||||||||||||||||||||
Sbjct: 26 ctcgtgccgaatcggcacgag 6

---

>dbj|D13758.1|RICSS230 Oryza sativa ss230 mRNA for ras-related GTP binding protein,
          complete cds
          Length = 946

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 2  ctcgtgccgaatcggcacgag 22
          |||||||||||||||||||||
Sbjct: 21 ctcgtgccgaatcggcacgag 1

---

>dbj|AP002854.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0014B15
          Length = 158821

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 461   ttcattgatgagattgatgcagttggaacaaagaggt 497
             ||||||||||||||||||||  |||| || |||||||
Sbjct: 85787 ttcattgatgagattgatgccattgggactaagaggt 85823

---

>emb|BX000484.12| Zebrafish DNA sequence from clone CH211-12E1 in linkage group 2,
             complete sequence
          Length = 158932

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 459   tcttcattgatgagattgatgcagttggaacaaagag 495
             ||||||| |||||||||||||| || |||| ||||||
Sbjct: 45509 tcttcatagatgagattgatgctgtgggaagaaagag 45545

---

>ref|XM_312924.2| Anopheles gambiae str. PEST ENSANGP00000014726
           (ENSANGG00000012237), partial mRNA
          Length = 1317

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 34/37 (91%), Gaps = 1/37 (2%)
 Strand = Plus / Plus

                                                
Query: 24  gttcgtcgacaagggaccagctggagccgggatgctc 60
           |||||||||||||| |||||||||| ||||| |||||
Sbjct: 405 gttcgtcgacaagg-accagctggaaccgggctgctc 440

---

>ref|XM_312923.2| Anopheles gambiae str. PEST ENSANGP00000014769
           (ENSANGG00000012280), partial mRNA
          Length = 1317

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 34/37 (91%), Gaps = 1/37 (2%)
 Strand = Plus / Plus

                                                
Query: 24  gttcgtcgacaagggaccagctggagccgggatgctc 60
           |||||||||||||| |||||||||| ||||| |||||
Sbjct: 405 gttcgtcgacaagg-accagctggaaccgggctgctc 440

---

>ref|XM_312720.2| Anopheles gambiae str. PEST ENSANGP00000017106
           (ENSANGG00000014617), partial mRNA
          Length = 1317

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 34/37 (91%), Gaps = 1/37 (2%)
 Strand = Plus / Plus

                                                
Query: 24  gttcgtcgacaagggaccagctggagccgggatgctc 60
           |||||||||||||| |||||||||| ||||| |||||
Sbjct: 405 gttcgtcgacaagg-accagctggaaccgggctgctc 440

---

>ref|XM_312719.2| Anopheles gambiae str. PEST ENSANGP00000017098
           (ENSANGG00000014609), partial mRNA
          Length = 1317

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 34/37 (91%), Gaps = 1/37 (2%)
 Strand = Plus / Plus

                                                
Query: 24  gttcgtcgacaagggaccagctggagccgggatgctc 60
           |||||||||||||| |||||||||| ||||| |||||
Sbjct: 405 gttcgtcgacaagg-accagctggaaccgggctgctc 440

---

>gb|AF177671.1|AF177671 Rattus norvegicus ATX1 homolog protein Rah1p (rah1) mRNA,
          complete cds
          Length = 503

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 2  ctcgtgccgaatcggcacgag 22
          |||||||||||||||||||||
Sbjct: 1  ctcgtgccgaatcggcacgag 21

---

>gb|AF130979.1|AF130979 Homo sapiens SH3 domain-containing protein 6511 mRNA, complete
          cds
          Length = 1907

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 2  ctcgtgccgaatcggcacgag 22
          |||||||||||||||||||||
Sbjct: 15 ctcgtgccgaatcggcacgag 35

---

>dbj|AK065612.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013026E01, full
           insert sequence
          Length = 1571

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 461 ttcattgatgagattgatgcagttggaacaaagaggt 497
           ||||||||||||||||||||  |||| || |||||||
Sbjct: 909 ttcattgatgagattgatgccattgggactaagaggt 945

---

>gb|AY109271.1| Zea mays PCO074636 mRNA sequence
          Length = 503

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 2  ctcgtgccgaatcggcacgag 22
          |||||||||||||||||||||
Sbjct: 46 ctcgtgccgaatcggcacgag 26

---

>gb|AY106084.1| Zea mays PCO072275 mRNA sequence
          Length = 1307

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 2  ctcgtgccgaatcggcacgag 22
          |||||||||||||||||||||
Sbjct: 28 ctcgtgccgaatcggcacgag 8

---

>gb|AF026844.1|AF026844 Homo sapiens ribosomal protein L41 mRNA, complete cds
          Length = 444

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 2  ctcgtgccgaatcggcacgag 22
          |||||||||||||||||||||
Sbjct: 1  ctcgtgccgaatcggcacgag 21

---

>gb|U71195.1|GMU71195 Glycine max napin-type 2S albumin 3 mRNA, complete cds
          Length = 777

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 2  ctcgtgccgaatcggcacgag 22
          |||||||||||||||||||||
Sbjct: 4  ctcgtgccgaatcggcacgag 24

---

>dbj|AB080019.1| Xenopus laevis mRNA for galectin family xgalectin-VIa, complete
          cds
          Length = 1427

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 2  ctcgtgccgaatcggcacgag 22
          |||||||||||||||||||||
Sbjct: 10 ctcgtgccgaatcggcacgag 30

---

>gb|AF074334.1|AF074334 Drosophila melanogaster cyclin H homolog (CycH) mRNA, complete
          cds
          Length = 1244

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 2  ctcgtgccgaatcggcacgag 22
          |||||||||||||||||||||
Sbjct: 27 ctcgtgccgaatcggcacgag 7

---

>gb|U61844.1|BFU61844 Bacillus firmus hypoxanthine-guanine phosphoribosyltransferase
            (HGPRT) and cell division protein (FtsH) genes, complete
            cds
          Length = 3098

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 459  tcttcattgatgagattgatgcagt 483
            |||| ||||||||||||||||||||
Sbjct: 1536 tctttattgatgagattgatgcagt 1560

---

>dbj|AB018544.1| Hydra magnipapillata mRNA for Hym-176 preprohormone, complete cds
          Length = 620

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 2  ctcgtgccgaatcggcacgag 22
          |||||||||||||||||||||
Sbjct: 26 ctcgtgccgaatcggcacgag 6

---

>dbj|AB071016.1| Oryza sativa (japonica cultivar-group) OsRPT5b mRNA for 26S
           proteasome regulatory particle triple-A ATPase
           subunit5b, partial cds
          Length = 758

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 461 ttcattgatgagattgatgcagttggaacaaagaggt 497
           ||||||||||||||||||||  |||| || |||||||
Sbjct: 115 ttcattgatgagattgatgccattgggactaagaggt 151

---

>ref|NM_123592.2| Arabidopsis thaliana VAR1 (VARIEGATED 1); ATP-dependent peptidase/
            ATPase/ metallopeptidase AT5G42270 (VAR1) mRNA, complete
            cds
          Length = 3058

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 455  attgtcttcattgatgagattgatgcagttgg 486
            ||||| || ||||||||||||||||| |||||
Sbjct: 1206 attgtgtttattgatgagattgatgctgttgg 1237

---

>ref|XM_633582.1| Dictyostelium discoideum Peptidase M41, FtsH domain-containing
            protein (DDB0229917), partial mRNA
          Length = 2295

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 455  attgtcttcattgatgagattgatgcagttgg 486
            ||||| ||||| ||||| ||||||||||||||
Sbjct: 1189 attgtattcatcgatgaaattgatgcagttgg 1220

---

>ref|XM_550086.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1071

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 447 ctccttcaattgtcttcattgatgagattgat 478
           ||||||| ||| ||||||||||||| ||||||
Sbjct: 173 ctccttccattatcttcattgatgaaattgat 204

---

>ref|XM_471556.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1074

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 461 ttcattgatgagattgatgcagttggaa 488
           ||||||||||| ||||||||| ||||||
Sbjct: 634 ttcattgatgaaattgatgcaattggaa 661

---

>gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complete genome
          Length = 2401520

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 455    attgtcttcattgatgagattgatgcagttgg 486
              ||||| || ||||||||||||||||| |||||
Sbjct: 180785 attgtttttattgatgagattgatgctgttgg 180816

---

>gb|BT018916.1| Zea mays clone EL01T0404G12.d mRNA sequence
          Length = 1782

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                       
Query: 1   cctcgtgccgaat-cggcacgagggttc 27
           ||||||||||||| ||||||||||||||
Sbjct: 904 cctcgtgccgaattcggcacgagggttc 877

---

>gb|BC071538.1| Danio rerio proteasome (prosome, macropain) 26S subunit, ATPase,
           1b, mRNA (cDNA clone MGC:86923 IMAGE:6905970), complete
           cds
          Length = 1521

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 65/80 (81%)
 Strand = Plus / Plus

                                                                       
Query: 455 attgtcttcattgatgagattgatgcagttggaacaaagaggtatgatgctcattcaggt 514
           ||||||||||| |||||||| || ||  ||||||| ||||| || ||  |  | ||||| 
Sbjct: 868 attgtcttcatcgatgagatagacgccattggaaccaagagatacgactcaaactcagga 927

                               
Query: 515 ggtgagcgcgagattcagag 534
           |||||||| |||||||||||
Sbjct: 928 ggtgagcgtgagattcagag 947

---

>gb|AY673996.1| Gracilaria tenuistipitata var. liui chloroplast, complete genome
          Length = 183883

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 455   attgtcttcattgatgagattgatgcagttgg 486
             ||||| ||||| ||||| ||||||||||||||
Sbjct: 65690 attgtattcatagatgaaattgatgcagttgg 65659

---

>gb|BC073566.1| Xenopus laevis hypothetical protein LOC443667, mRNA (cDNA clone
            IMAGE:5511363), partial cds
          Length = 2776

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 464  attgatgagattgatgcagttgga 487
            |||||||| |||||||||||||||
Sbjct: 1137 attgatgaaattgatgcagttgga 1160



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 305  gggaagactctacttgcaaaggct 328
            ||||||||||| ||||||||||||
Sbjct: 978  gggaagactcttcttgcaaaggct 1001

---

>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome
          Length = 2560265

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 459    tcttcattgatgagattgatgcagttgg 486
              ||||||||||||||||||| || |||||
Sbjct: 314191 tcttcattgatgagattgacgctgttgg 314218

---

>ref|XM_421449.1| PREDICTED: Gallus gallus similar to RIKEN cDNA D630024B06
            (LOC423558), mRNA
          Length = 3956

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 117  atcctatggtttctgtcatg 136
            ||||||||||||||||||||
Sbjct: 3453 atcctatggtttctgtcatg 3472

---

>gb|BC071038.1| Xenopus laevis hypothetical protein LOC432063, mRNA (cDNA clone
            IMAGE:4033185), partial cds
          Length = 2839

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 305  gggaagactctacttgcaaaggct 328
            ||||||||||| ||||||||||||
Sbjct: 1035 gggaagactcttcttgcaaaggct 1058

---

>ref|NM_001006378.1| Gallus gallus vacuolar protein sorting 4 homolog B (S. cerevisiae)
            (VPS4B), mRNA
          Length = 4429

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 459  tcttcattgatgagattgat 478
            ||||||||||||||||||||
Sbjct: 1714 tcttcattgatgagattgat 1733

---

>ref|XM_708910.1| Candida albicans SC5314 hypothetical protein (CaO19.9876), mRNA
          Length = 2481

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 446 tctccttcaattgtcttcattgatgagattga 477
           |||||||| ||| | |||||||||||||||||
Sbjct: 922 tctccttccattattttcattgatgagattga 953

---

>ref|XM_708852.1| Candida albicans SC5314 hypothetical protein (CaO19.2340), mRNA
          Length = 2481

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 446 tctccttcaattgtcttcattgatgagattga 477
           |||||||| ||| | |||||||||||||||||
Sbjct: 922 tctccttccattattttcattgatgagattga 953

---

>ref|XR_003282.1| PREDICTED: Mus musculus similar to vacuolar protein sorting 4b
           (LOC238963), mRNA
          Length = 1441

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 459 tcttcattgatgagattgat 478
           ||||||||||||||||||||
Sbjct: 706 tcttcattgatgagattgat 725

---

>ref|XR_004725.1| PREDICTED: Mus musculus similar to vacuolar protein sorting 4b
           (LOC675056), mRNA
          Length = 1442

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 459 tcttcattgatgagattgat 478
           ||||||||||||||||||||
Sbjct: 706 tcttcattgatgagattgat 725

---

>gb|AC092143.4| Homo sapiens chromosome 16 clone RP11-566K11, complete sequence
          Length = 146534

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 461    ttcattgatgagattgatgc 480
              ||||||||||||||||||||
Sbjct: 118338 ttcattgatgagattgatgc 118357


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,975,599
Number of Sequences: 3902068
Number of extensions: 3975599
Number of successful extensions: 69512
Number of sequences better than 10.0: 305
Number of HSP's better than 10.0 without gapping: 289
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 68740
Number of HSP's gapped (non-prelim): 762
length of query: 541
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 518
effective length of database: 17,143,297,704
effective search space: 8880228210672
effective search space used: 8880228210672
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---