ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags4e05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_197731.1| Oryza sativa (japonica cultivar-group) unknown ... 100 1e-17
2gb|AC079874.21| Oryza sativa chromosome 10 BAC OSJNBa0042H09 gen... 100 1e-17
3dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 100 1e-17
4dbj|AK066219.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 1e-17
5gb|AY105362.1| Zea mays PCO108394 mRNA sequence 100 1e-17
6gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 100 1e-17
7gb|AY596600.1| Saccharum officinarum clone SCQSLB1051H10, comple... 94 6e-16
8ref|NM_117837.3| Arabidopsis thaliana ATG2484-1; RNA binding AT4... 50 0.008
9emb|Z97343.1|ATFCA8 Arabidopsis thaliana DNA chromosome 4, ESSA ... 50 0.008
10emb|AL161546.2|ATCHRIV46 Arabidopsis thaliana DNA chromosome 4, ... 50 0.008
11gb|BT008431.1| Arabidopsis thaliana At4g17330 gene, complete cds 50 0.008
12gb|AY099730.1| Arabidopsis thaliana G2484-1 protein (At4g17330) ... 50 0.008
13emb|AJ222646.1|ATAJ646 Arabidopsis thaliana mRNA for G2484-1 pro... 50 0.008
14gb|AY110628.1| Zea mays CL30444_1 mRNA sequence 50 0.008
15gb|AC125444.9| Mus musculus chromosome 1, clone RP24-499L20, com... 44 0.52
16gb|AC161180.3| Mus musculus chromosome 1, clone RP23-149C6, comp... 44 0.52
17gb|AC162384.6| Mus musculus 10 BAC RP24-292K6 (Roswell Park Canc... 42 2.1
18gb|AC162310.7| Mus musculus 10 BAC RP24-225K5 (Roswell Park Canc... 42 2.1
19gb|AC155833.10| Mus musculus 10 BAC RP24-405O10 (Roswell Park Ca... 42 2.1
20gb|AC137151.3| Mus musculus BAC clone RP24-217N24 from 6, comple... 42 2.1
21dbj|AP003120.4| Homo sapiens genomic DNA, chromosome 11 clone:RP... 42 2.1
22gb|AC132431.3| Mus musculus BAC clone RP23-211M23 from 6, comple... 42 2.1
23gb|AC104540.9| Mus musculus chromosome 5, clone RP23-301P15, com... 40 8.2
24gb|AY686596.1| Apis mellifera Dscam gene, complete cds, alternat... 40 8.2
25gb|AC166150.2| Mus musculus chromosome 1, clone RP23-321N22, com... 40 8.2
26gb|AC161346.7| Mus musculus chromosome 1, clone RP24-335G4, comp... 40 8.2
27emb|AL354711.24| Human DNA sequence from clone RP11-340N12 on ch... 40 8.2
28gb|AC158149.3| Mus musculus chromosome 5, clone RP24-296L6, comp... 40 8.2
29gb|DQ441406.1| Allochromatium vinosum putative Zn-dependent prot... 40 8.2
30gb|DQ232399.1| Uncultured bacterium clone CYCU-0244 NirS (nirS) ... 40 8.2
31dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
32gb|AC141366.2| Homo sapiens fosmid clone XXFOS-87310E7 from 2, c... 40 8.2
33dbj|AP005072.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
34dbj|AP004883.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
35emb|AL929585.11| Mouse DNA sequence from clone RP23-97O7 on chro... 40 8.2 
>ref|NM_197731.1| Oryza sativa (japonica cultivar-group) unknown protein
            (OSJNBa0042H09.8), mRNA
          Length = 6504

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 68/74 (91%)
 Strand = Plus / Plus

                                                                        
Query: 523  ggtgttccaaaacctggaaagaagaagaagtttatggatgtaagcaaacattatgttggc 582
            |||||||||||||||||||||||||| ||||||||||| ||||||||||| |||| ||  
Sbjct: 5395 ggtgttccaaaacctggaaagaagaaaaagtttatggaagtaagcaaacactatgatgca 5454

                          
Query: 583  gatcaagctgataa 596
            ||||||||||||||
Sbjct: 5455 gatcaagctgataa 5468



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 56/63 (88%)
 Strand = Plus / Plus

                                                                        
Query: 396  aaaaccagatgagccaaggccactggctttatctgatagggacgtgctttttaacattgg 455
            ||||||||| ||||||| |||| |||||||||||||||||||| || |||| ||||| ||
Sbjct: 5256 aaaaccagaggagccaaagccattggctttatctgatagggacatggttttcaacatcgg 5315

               
Query: 456  aaa 458
            |||
Sbjct: 5316 aaa 5318



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 64   aataagggtgattctccatatgagaaacg 92
            |||||||||||||||||  ||||||||||
Sbjct: 5143 aataagggtgattctcctcatgagaaacg 5171
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>gb|AC079874.21| Oryza sativa chromosome 10 BAC OSJNBa0042H09 genomic sequence, complete
              sequence
          Length = 144191

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 68/74 (91%)
 Strand = Plus / Plus

                                                                          
Query: 523    ggtgttccaaaacctggaaagaagaagaagtttatggatgtaagcaaacattatgttggc 582
              |||||||||||||||||||||||||| ||||||||||| ||||||||||| |||| ||  
Sbjct: 102923 ggtgttccaaaacctggaaagaagaaaaagtttatggaagtaagcaaacactatgatgca 102982

                            
Query: 583    gatcaagctgataa 596
              ||||||||||||||
Sbjct: 102983 gatcaagctgataa 102996



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 56/63 (88%)
 Strand = Plus / Plus

                                                                          
Query: 396    aaaaccagatgagccaaggccactggctttatctgatagggacgtgctttttaacattgg 455
              ||||||||| ||||||| |||| |||||||||||||||||||| || |||| ||||| ||
Sbjct: 102784 aaaaccagaggagccaaagccattggctttatctgatagggacatggttttcaacatcgg 102843

                 
Query: 456    aaa 458
              |||
Sbjct: 102844 aaa 102846
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 68/74 (91%)
 Strand = Plus / Minus

                                                                            
Query: 523      ggtgttccaaaacctggaaagaagaagaagtttatggatgtaagcaaacattatgttggc 582
                |||||||||||||||||||||||||| ||||||||||| ||||||||||| |||| ||  
Sbjct: 21507134 ggtgttccaaaacctggaaagaagaaaaagtttatggaagtaagcaaacactatgatgca 21507075

                              
Query: 583      gatcaagctgataa 596
                ||||||||||||||
Sbjct: 21507074 gatcaagctgataa 21507061



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 56/63 (88%)
 Strand = Plus / Minus

                                                                            
Query: 396      aaaaccagatgagccaaggccactggctttatctgatagggacgtgctttttaacattgg 455
                ||||||||| ||||||| |||| |||||||||||||||||||| || |||| ||||| ||
Sbjct: 21507273 aaaaccagaggagccaaagccattggctttatctgatagggacatggttttcaacatcgg 21507214

                   
Query: 456      aaa 458
                |||
Sbjct: 21507213 aaa 21507211
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>dbj|AK066219.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052O05, full
           insert sequence
          Length = 1796

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 68/74 (91%)
 Strand = Plus / Plus

                                                                       
Query: 523 ggtgttccaaaacctggaaagaagaagaagtttatggatgtaagcaaacattatgttggc 582
           |||||||||||||||||||||||||| ||||||||||| ||||||||||| |||| ||  
Sbjct: 722 ggtgttccaaaacctggaaagaagaaaaagtttatggaagtaagcaaacactatgatgca 781

                         
Query: 583 gatcaagctgataa 596
           ||||||||||||||
Sbjct: 782 gatcaagctgataa 795



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 56/63 (88%)
 Strand = Plus / Plus

                                                                       
Query: 396 aaaaccagatgagccaaggccactggctttatctgatagggacgtgctttttaacattgg 455
           ||||||||| ||||||| |||| |||||||||||||||||||| || |||| ||||| ||
Sbjct: 583 aaaaccagaggagccaaagccattggctttatctgatagggacatggttttcaacatcgg 642

              
Query: 456 aaa 458
           |||
Sbjct: 643 aaa 645



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 64  aataagggtgattctccatatgagaaacg 92
           |||||||||||||||||  ||||||||||
Sbjct: 470 aataagggtgattctcctcatgagaaacg 498
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>gb|AY105362.1| Zea mays PCO108394 mRNA sequence
          Length = 1657

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 79/88 (89%), Gaps = 3/88 (3%)
 Strand = Plus / Plus

                                                                       
Query: 493 ggactgcaaaaggaaggaacaaaggtcttc---ggtgttccaaaacctggaaagaagaag 549
           ||||| ||||| |||||| |||||||| ||   ||||||||||||| |||||||||||||
Sbjct: 536 ggactacaaaaagaaggatcaaaggtcgtctatggtgttccaaaacatggaaagaagaag 595

                                       
Query: 550 aagtttatggatgtaagcaaacattatg 577
           ||||||||||| ||||||||||||||||
Sbjct: 596 aagtttatggaagtaagcaaacattatg 623



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 76/93 (81%)
 Strand = Plus / Plus

                                                                       
Query: 3   tgtttggcaggatggtaaatggacagagtggtcccgtgcacgagagaggaaagataaatc 62
           ||||||| | |||||| |||||  ||||||||||| |||| |||| ||||||   |||||
Sbjct: 244 tgtttggaaagatggtcaatgggtagagtggtcccatgcaagagaaaggaaatccaaatc 303

                                            
Query: 63  aaataagggtgattctccatatgagaaacgcca 95
            |||||||| ||||| ||   ||||||||||||
Sbjct: 304 taataagggcgattcacctcctgagaaacgcca 336
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 68/74 (91%)
 Strand = Plus / Minus

                                                                            
Query: 523      ggtgttccaaaacctggaaagaagaagaagtttatggatgtaagcaaacattatgttggc 582
                |||||||||||||||||||||||||| ||||||||||| ||||||||||| |||| ||  
Sbjct: 21518797 ggtgttccaaaacctggaaagaagaaaaagtttatggaagtaagcaaacactatgatgca 21518738

                              
Query: 583      gatcaagctgataa 596
                ||||||||||||||
Sbjct: 21518737 gatcaagctgataa 21518724



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 56/63 (88%)
 Strand = Plus / Minus

                                                                            
Query: 396      aaaaccagatgagccaaggccactggctttatctgatagggacgtgctttttaacattgg 455
                ||||||||| ||||||| |||| |||||||||||||||||||| || |||| ||||| ||
Sbjct: 21518936 aaaaccagaggagccaaagccattggctttatctgatagggacatggttttcaacatcgg 21518877

                   
Query: 456      aaa 458
                |||
Sbjct: 21518876 aaa 21518874
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>gb|AY596600.1| Saccharum officinarum clone SCQSLB1051H10, complete sequence
          Length = 3010

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 53/55 (96%)
 Strand = Plus / Plus

                                                                   
Query: 523  ggtgttccaaaacctggaaagaagaagaagtttatggatgtaagcaaacattatg 577
            ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1928 ggtgttccaaaacatggaaagaagaagaagtttatggaagtaagcaaacattatg 1982



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 59/69 (85%)
 Strand = Plus / Plus

                                                                        
Query: 3    tgtttggcaggatggtaaatggacagagtggtcccgtgcacgagagaggaaagataaatc 62
            ||||||| | |||||| |||||| |||||||||||||||| |||| ||||||   |||||
Sbjct: 1603 tgtttggaaagatggtcaatggatagagtggtcccgtgcaagagaaaggaaatccaaatc 1662

                     
Query: 63   aaataaggg 71
             ||||||||
Sbjct: 1663 taataaggg 1671
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>ref|NM_117837.3| Arabidopsis thaliana ATG2484-1; RNA binding AT4G17330 (ATG2484-1)
            mRNA, complete cds
          Length = 3852

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                     
Query: 523  ggtgttccaaaacctggaaagaagaagaagtttatggatgtaagcaaacattatgtt 579
            ||||| || |||||||||||||| | |||||| ||||| || |||||||| ||||||
Sbjct: 2915 ggtgtccctaaacctggaaagaaaaggaagttcatggacgtgagcaaacactatgtt 2971
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>emb|Z97343.1|ATFCA8 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 8
          Length = 207674

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                      
Query: 523   ggtgttccaaaacctggaaagaagaagaagtttatggatgtaagcaaacattatgtt 579
             ||||| || |||||||||||||| | |||||| ||||| || |||||||| ||||||
Sbjct: 54790 ggtgtccctaaacctggaaagaaaaggaagttcatggacgtgagcaaacactatgtt 54734
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>emb|AL161546.2|ATCHRIV46 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 46
          Length = 198788

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                      
Query: 523   ggtgttccaaaacctggaaagaagaagaagtttatggatgtaagcaaacattatgtt 579
             ||||| || |||||||||||||| | |||||| ||||| || |||||||| ||||||
Sbjct: 44155 ggtgtccctaaacctggaaagaaaaggaagttcatggacgtgagcaaacactatgtt 44099
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>gb|BT008431.1| Arabidopsis thaliana At4g17330 gene, complete cds
          Length = 3177

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                     
Query: 523  ggtgttccaaaacctggaaagaagaagaagtttatggatgtaagcaaacattatgtt 579
            ||||| || |||||||||||||| | |||||| ||||| || |||||||| ||||||
Sbjct: 2524 ggtgtccctaaacctggaaagaaaaggaagttcatggacgtgagcaaacactatgtt 2580
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>gb|AY099730.1| Arabidopsis thaliana G2484-1 protein (At4g17330) mRNA, complete cds
          Length = 3825

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                     
Query: 523  ggtgttccaaaacctggaaagaagaagaagtttatggatgtaagcaaacattatgtt 579
            ||||| || |||||||||||||| | |||||| ||||| || |||||||| ||||||
Sbjct: 2915 ggtgtccctaaacctggaaagaaaaggaagttcatggacgtgagcaaacactatgtt 2971
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>emb|AJ222646.1|ATAJ646 Arabidopsis thaliana mRNA for G2484-1 protein
          Length = 3117

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                     
Query: 523  ggtgttccaaaacctggaaagaagaagaagtttatggatgtaagcaaacattatgtt 579
            ||||| || |||||||||||||| | |||||| ||||| || |||||||| ||||||
Sbjct: 2212 ggtgtccctaaacctggaaagaaaaggaagttcatggacgtgagcaaacactatgtt 2268
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>gb|AY110628.1| Zea mays CL30444_1 mRNA sequence
          Length = 782

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 76/93 (81%)
 Strand = Plus / Plus

                                                                       
Query: 3   tgtttggcaggatggtaaatggacagagtggtcccgtgcacgagagaggaaagataaatc 62
           ||||||| | |||| | |||||| |||||||||||||||| |||| ||||||   || ||
Sbjct: 484 tgtttggaaagatgttcaatggatagagtggtcccgtgcaagagaaaggaaatccaagtc 543

                                            
Query: 63  aaataagggtgattctccatatgagaaacgcca 95
            |||||||| ||||| ||   ||||||||||||
Sbjct: 544 taataagggcgattcacctcttgagaaacgcca 576
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>gb|AC125444.9| Mus musculus chromosome 1, clone RP24-499L20, complete sequence
          Length = 162238

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 496    ctgcaaaaggaaggaacaaagg 517
              ||||||||||||||||||||||
Sbjct: 143375 ctgcaaaaggaaggaacaaagg 143354
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>gb|AC161180.3| Mus musculus chromosome 1, clone RP23-149C6, complete sequence
          Length = 215599

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 496    ctgcaaaaggaaggaacaaagg 517
              ||||||||||||||||||||||
Sbjct: 103270 ctgcaaaaggaaggaacaaagg 103291
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>gb|AC162384.6| Mus musculus 10 BAC RP24-292K6 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 172853

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 12    ggatggtaaatggacagagtg 32
             |||||||||||||||||||||
Sbjct: 50070 ggatggtaaatggacagagtg 50090
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>gb|AC162310.7| Mus musculus 10 BAC RP24-225K5 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 108408

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 12    ggatggtaaatggacagagtg 32
             |||||||||||||||||||||
Sbjct: 84234 ggatggtaaatggacagagtg 84214
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>gb|AC155833.10| Mus musculus 10 BAC RP24-405O10 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 176338

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 12    ggatggtaaatggacagagtg 32
             |||||||||||||||||||||
Sbjct: 33724 ggatggtaaatggacagagtg 33704
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>gb|AC137151.3| Mus musculus BAC clone RP24-217N24 from 6, complete sequence
          Length = 177615

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 148    tctaaagacaagaagagcact 168
              |||||||||||||||||||||
Sbjct: 167317 tctaaagacaagaagagcact 167297
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>dbj|AP003120.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-657K20, complete
             sequence
          Length = 189499

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 48    gaggaaagataaatcaaataa 68
             |||||||||||||||||||||
Sbjct: 81038 gaggaaagataaatcaaataa 81018
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>gb|AC132431.3| Mus musculus BAC clone RP23-211M23 from 6, complete sequence
          Length = 207155

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 148    tctaaagacaagaagagcact 168
              |||||||||||||||||||||
Sbjct: 182277 tctaaagacaagaagagcact 182297
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>gb|AC104540.9| Mus musculus chromosome 5, clone RP23-301P15, complete sequence
          Length = 221681

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 498   gcaaaaggaaggaacaaagg 517
             ||||||||||||||||||||
Sbjct: 43046 gcaaaaggaaggaacaaagg 43065
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>gb|AY686596.1| Apis mellifera Dscam gene, complete cds, alternatively spliced
          Length = 116066

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 500   aaaaggaaggaacaaaggtcttcg 523
             |||||||||||| |||||||||||
Sbjct: 77241 aaaaggaaggaaaaaaggtcttcg 77218
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>gb|AC166150.2| Mus musculus chromosome 1, clone RP23-321N22, complete sequence
          Length = 214765

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 391   gtaggaaaaccagatgagccaagg 414
             ||||||||| ||||||||||||||
Sbjct: 87944 gtaggaaaaacagatgagccaagg 87967
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>gb|AC161346.7| Mus musculus chromosome 1, clone RP24-335G4, complete sequence
          Length = 191681

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 391   gtaggaaaaccagatgagccaagg 414
             ||||||||| ||||||||||||||
Sbjct: 93364 gtaggaaaaacagatgagccaagg 93341
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>emb|AL354711.24| Human DNA sequence from clone RP11-340N12 on chromosome 9 Contains the
             3' end of a novel gene (FLJ25636) and the 5' end of a
             novel gene (FLJ20276), complete sequence
          Length = 162126

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 501   aaaggaaggaacaaaggtct 520
             ||||||||||||||||||||
Sbjct: 79220 aaaggaaggaacaaaggtct 79201
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>gb|AC158149.3| Mus musculus chromosome 5, clone RP24-296L6, complete sequence
          Length = 155517

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 498    gcaaaaggaaggaacaaagg 517
              ||||||||||||||||||||
Sbjct: 147671 gcaaaaggaaggaacaaagg 147690
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>gb|DQ441406.1| Allochromatium vinosum putative Zn-dependent protease gene, partial
           cds; and SoxY precursor (soxY), SoxZ (soxZ), probable
           L-isoaspartate(D-aspartate)o-methyltransferase, and
           putative GTP cyclohydrolase genes, complete cds
          Length = 3310

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 532 aaacctggaaagaagaagaa 551
           ||||||||||||||||||||
Sbjct: 698 aaacctggaaagaagaagaa 717
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>gb|DQ232399.1| Uncultured bacterium clone CYCU-0244 NirS (nirS) gene, partial cds
          Length = 824

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 291 tgccaaggacaagaagagcg 310
           ||||||||||||||||||||
Sbjct: 733 tgccaaggacaagaagagcg 752
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 538      ggaaagaagaagaagtttat 557
                ||||||||||||||||||||
Sbjct: 26794424 ggaaagaagaagaagtttat 26794443
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>gb|AC141366.2| Homo sapiens fosmid clone XXFOS-87310E7 from 2, complete sequence
          Length = 22886

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 215  cccctaccaaggacaagaag 234
            ||||||||||||||||||||
Sbjct: 8573 cccctaccaaggacaagaag 8592
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>dbj|AP005072.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0708H12
          Length = 162381

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 538    ggaaagaagaagaagtttat 557
              ||||||||||||||||||||
Sbjct: 156454 ggaaagaagaagaagtttat 156473
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>dbj|AP004883.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0516F12
          Length = 146364

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 538   ggaaagaagaagaagtttat 557
             ||||||||||||||||||||
Sbjct: 60477 ggaaagaagaagaagtttat 60496
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>emb|AL929585.11| Mouse DNA sequence from clone RP23-97O7 on chromosome 4, complete
              sequence
          Length = 246011

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 490    cccggactgcaaaaggaagg 509
              ||||||||||||||||||||
Sbjct: 118446 cccggactgcaaaaggaagg 118427


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,359,561
Number of Sequences: 3902068
Number of extensions: 6359561
Number of successful extensions: 113980
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 113824
Number of HSP's gapped (non-prelim): 156
length of query: 599
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 576
effective length of database: 17,143,297,704
effective search space: 9874539477504
effective search space used: 9874539477504
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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