Clone Name	bags4e01
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|BT018366.1| Zea mays clone EL01N0201H07.d mRNA sequence	511	e-142
2	dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D...	190	3e-45
3	dbj|AP003526.3| Oryza sativa (japonica cultivar-group) genomic D...	190	3e-45
4	ref|NM_100075.3| Arabidopsis thaliana ATP binding / microtubule ...	88	3e-14
5	gb|AC182651.2| Populus trichocarpa clone Pop1-118I23, complete s...	58	3e-05
6	dbj|AP006863.1| Lotus japonicus genomic DNA, chromosome 2, clone...	50	0.007
7	ref|NM_101115.2| Arabidopsis thaliana PAK; ATP binding / microtu...	48	0.026
8	gb|AF159052.1|AF159052 Arabidopsis thaliana kinesin-like protein...	48	0.026
9	emb|BX248586.1| Blochmannia floridanus complete genome; segment 3/3	46	0.10
10	gb|AC020622.3|F22M8 Sequence of BAC F22M8 from Arabidopsis thali...	46	0.10
11	ref|NM_115344.3| Arabidopsis thaliana ATP binding / microtubule ...	42	1.6
12	emb|BX000486.13| Zebrafish DNA sequence from clone DKEY-149M16 i...	42	1.6
13	gb|AC106047.5| Homo sapiens BAC clone RP11-293A21 from 4, comple...	42	1.6
14	gb|AF402961.1| Oryza sativa chromosome 4 clone F8-40, genomic se...	40	6.4
15	ref|XM_870269.1| PREDICTED: Bos taurus similar to cullin 4A isof...	40	6.4
16	gb|AC146144.2| Pan troglodytes BAC clone RP43-37J17 from 7, comp...	40	6.4
17	gb|AC146041.2| Pan troglodytes BAC clone RP43-98A7 from 7, compl...	40	6.4
18	gb|AC121590.2| Mus musculus BAC clone RP23-281L22 from 2, comple...	40	6.4
19	emb|AL512652.18| Human DNA sequence from clone RP11-261P13 on ch...	40	6.4
20	gb|BT023786.1| Drosophila melanogaster HL05663 full insert cDNA	40	6.4
21	gb|AY140910.1| Candidatus Fritschea bemisiae strain Falk YaeL (y...	40	6.4
22	gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome	40	6.4
23	gb|AY118373.1| Drosophila melanogaster RE17794 full insert cDNA	40	6.4
24	ref|NM_080076.2| Drosophila melanogaster lines CG11770-RA (lin),...	40	6.4
25	ref|NM_079660.3| Drosophila melanogaster beaten path IIa CG14334...	40	6.4
26	gb|AC090489.8| Genomic sequence for Mus musculus, clone RP23-104...	40	6.4
27	gb|AF325713.1|AF325713 Drosophila melanogaster beaten path IIa m...	40	6.4
28	gb|AF534407.1| Hildenbrandia crouanii isolate URUSW1 ribulose-1,...	40	6.4
29	gb|AC007471.4|AC007471 Drosophila melanogaster, chromosome 2R, r...	40	6.4
30	gb|AC011763.6|AC011763 Drosophila melanogaster, chromosome 3R, r...	40	6.4
31	gb|AC159186.4| Mus musculus BAC clone RP24-281N15 from chromosom...	40	6.4
32	gb|AF272358.1|AF272358 Drosophila melanogaster lines mRNA, compl...	40	6.4
33	gb|BT021378.1| Drosophila melanogaster LD43682 full insert cDNA	40	6.4
34	gb|AE003717.2| Drosophila melanogaster chromosome 3R, section 55...	40	6.4
35	gb|AE003835.4| Drosophila melanogaster chromosome 2R, section 15...	40	6.4
36	gb|AC006074.1|AC006074 Drosophila melanogaster, chromosome 2R, r...	40	6.4
37	gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome	40	6.4
38	gb|DQ138794.1| Drosophila melanogaster strain Ral1 CG11770 gene,...	40	6.4
39	gb|AC170752.2| Mus musculus BAC clone RP23-116B8 from chromosome...	40	6.4
40	emb|AL732404.7| Mouse DNA sequence from clone RP23-177D21 on chr...	40	6.4

---

>gb|BT018366.1| Zea mays clone EL01N0201H07.d mRNA sequence
          Length = 1674

 Score =  511 bits (258), Expect = e-142
 Identities = 411/462 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   agagcagagcaatggacctaaggcgccagtcgctaaactctttgagcaagttgggttaca 60
           |||||||||||||||||| |||   ||| | || ||||||||||| ||||||||||||||
Sbjct: 511 agagcagagcaatggaccaaagcaaccaattgccaaactctttgaacaagttgggttaca 570

                                                                       
Query: 61  gaagatattgtcattacttgagtcggaagaacctgatgttcgtgttcatgccgtgaaagt 120
            |||||||||||||| || || || ||||| |||||||| || |||||||| ||||||||
Sbjct: 571 aaagatattgtcattgctcgaatctgaagagcctgatgtccgcgttcatgcagtgaaagt 630

                                                                       
Query: 121 tgtcgcgaatctggcagctgaagaggcaaatcaagaaaagattgtggaagcaggtggcct 180
           ||| || |||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 631 tgttgcaaatctggcagctgaagaggcaaatcaggaaaagattgtagaagcaggtggcct 690

                                                                       
Query: 181 cacttccctcctaatgctgcttaggagctctgaggatgagaccatacgccgagtagcagc 240
           ||||||||| || ||||| ||||||||||||||||||||||| || ||  ||||||||||
Sbjct: 691 cacttcccttcttatgctacttaggagctctgaggatgagacaattcgtagagtagcagc 750

                                                                       
Query: 241 aggagcaattgctaatcttgcaatgaatgaaacgaaccaagatcttataatggctcaagg 300
           |||||||||||||||||||||| || ||||||| || ||||||||||| |||||  ||||
Sbjct: 751 aggagcaattgctaatcttgcactgtatgaaacaaatcaagatcttatcatggcagaagg 810

                                                                       
Query: 301 tggtgtaaccttgttgtcaatgacagcatctgatgcagaggacccacaaactctaagaat 360
            ||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 811 aggtgtaaccttgttgtctatgacagcatctgatgcagaggatccacaaactcttagaat 870

                                                                       
Query: 361 ggtggctggagctattgctaacctgtgtggcaatgacaaactgcaaactcgtttaagagg 420
           |||||||||||| || |||||||| ||||||||||||||||||||||  || || || ||
Sbjct: 871 ggtggctggagcaatagctaacctttgtggcaatgacaaactgcaaatacggttgagggg 930

                                                     
Query: 421 agaaggtggaattaaagcattgctgggaatggttaagtgtgg 462
           |||||||||||| ||||||||||| || ||||||| ||||||
Sbjct: 931 agaaggtggaatcaaagcattgcttgggatggttaggtgtgg 972

---

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  190 bits (96), Expect = 3e-45
 Identities = 120/128 (93%)
 Strand = Plus / Minus

                                                                           
Query: 142     agaggcaaatcaagaaaagattgtggaagcaggtggcctcacttccctcctaatgctgct 201
               |||||||||||| ||||||||||| |||||||||||||| ||||| ||||||||||||||
Sbjct: 1974722 agaggcaaatcaggaaaagattgtagaagcaggtggccttacttctctcctaatgctgct 1974663

                                                                           
Query: 202     taggagctctgaggatgagaccatacgccgagtagcagcaggagcaattgctaatcttgc 261
               ||||||||| |||||||||||||| ||| ||||||||||||||||||||||||| |||||
Sbjct: 1974662 taggagctccgaggatgagaccattcgcagagtagcagcaggagcaattgctaaccttgc 1974603

                       
Query: 262     aatgaatg 269
               ||||||||
Sbjct: 1974602 aatgaatg 1974595



 Score =  149 bits (75), Expect = 1e-32
 Identities = 90/95 (94%)
 Strand = Plus / Minus

                                                                           
Query: 49      agttgggttacagaagatattgtcattacttgagtcggaagaacctgatgttcgtgttca 108
               ||||||||||||||||||| |||| || ||||| ||||||||||||||||||||||||||
Sbjct: 1975243 agttgggttacagaagatactgtcgttgcttgaatcggaagaacctgatgttcgtgttca 1975184

                                                  
Query: 109     tgccgtgaaagttgtcgcgaatctggcagctgaag 143
               ||| |||||||||||||||||||||||||||||||
Sbjct: 1975183 tgcagtgaaagttgtcgcgaatctggcagctgaag 1975149



 Score =  149 bits (75), Expect = 1e-32
 Identities = 114/127 (89%)
 Strand = Plus / Minus

                                                                           
Query: 269     gaaacgaaccaagatcttataatggctcaaggtggtgtaaccttgttgtcaatgacagca 328
               ||||| |||||||||||||| ||||| ||||||||||||| | |||| || |||||||||
Sbjct: 1974494 gaaacaaaccaagatcttatcatggcccaaggtggtgtaagcctgttatctatgacagca 1974435

                                                                           
Query: 329     tctgatgcagaggacccacaaactctaagaatggtggctggagctattgctaacctgtgt 388
               |||||||| |||||||||||||||||||||||||| |||||||| || || ||||| |||
Sbjct: 1974434 tctgatgcggaggacccacaaactctaagaatggttgctggagccatcgccaacctttgt 1974375

                      
Query: 389     ggcaatg 395
               |||||||
Sbjct: 1974374 ggcaatg 1974368



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 73/83 (87%)
 Strand = Plus / Minus

                                                                           
Query: 395     gacaaactgcaaactcgtttaagaggagaaggtggaattaaagcattgctgggaatggtt 454
               |||||||||||||| || || |||||||||||||| || |||||||||||||||||||| 
Sbjct: 1974025 gacaaactgcaaacacggttgagaggagaaggtggcatcaaagcattgctgggaatggtc 1973966

                                      
Query: 455     aagtgtggccatcctgatgtcct 477
               || || || || |||||||||||
Sbjct: 1973965 aaatgcgggcaccctgatgtcct 1973943



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                 
Query: 1       agagcagagcaatggacctaaggcgccagtcgctaaactctttgagcaag 50
               |||||||||||||||||||||| ||||  | |||||||| ||||| ||||
Sbjct: 1975514 agagcagagcaatggacctaagccgcccattgctaaactgtttgaacaag 1975465

---

>dbj|AP003526.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0548D03
          Length = 156709

 Score =  190 bits (96), Expect = 3e-45
 Identities = 120/128 (93%)
 Strand = Plus / Minus

                                                                          
Query: 142    agaggcaaatcaagaaaagattgtggaagcaggtggcctcacttccctcctaatgctgct 201
              |||||||||||| ||||||||||| |||||||||||||| ||||| ||||||||||||||
Sbjct: 103502 agaggcaaatcaggaaaagattgtagaagcaggtggccttacttctctcctaatgctgct 103443

                                                                          
Query: 202    taggagctctgaggatgagaccatacgccgagtagcagcaggagcaattgctaatcttgc 261
              ||||||||| |||||||||||||| ||| ||||||||||||||||||||||||| |||||
Sbjct: 103442 taggagctccgaggatgagaccattcgcagagtagcagcaggagcaattgctaaccttgc 103383

                      
Query: 262    aatgaatg 269
              ||||||||
Sbjct: 103382 aatgaatg 103375



 Score =  149 bits (75), Expect = 1e-32
 Identities = 90/95 (94%)
 Strand = Plus / Minus

                                                                          
Query: 49     agttgggttacagaagatattgtcattacttgagtcggaagaacctgatgttcgtgttca 108
              ||||||||||||||||||| |||| || ||||| ||||||||||||||||||||||||||
Sbjct: 104023 agttgggttacagaagatactgtcgttgcttgaatcggaagaacctgatgttcgtgttca 103964

                                                 
Query: 109    tgccgtgaaagttgtcgcgaatctggcagctgaag 143
              ||| |||||||||||||||||||||||||||||||
Sbjct: 103963 tgcagtgaaagttgtcgcgaatctggcagctgaag 103929



 Score =  149 bits (75), Expect = 1e-32
 Identities = 114/127 (89%)
 Strand = Plus / Minus

                                                                          
Query: 269    gaaacgaaccaagatcttataatggctcaaggtggtgtaaccttgttgtcaatgacagca 328
              ||||| |||||||||||||| ||||| ||||||||||||| | |||| || |||||||||
Sbjct: 103274 gaaacaaaccaagatcttatcatggcccaaggtggtgtaagcctgttatctatgacagca 103215

                                                                          
Query: 329    tctgatgcagaggacccacaaactctaagaatggtggctggagctattgctaacctgtgt 388
              |||||||| |||||||||||||||||||||||||| |||||||| || || ||||| |||
Sbjct: 103214 tctgatgcggaggacccacaaactctaagaatggttgctggagccatcgccaacctttgt 103155

                     
Query: 389    ggcaatg 395
              |||||||
Sbjct: 103154 ggcaatg 103148



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 73/83 (87%)
 Strand = Plus / Minus

                                                                          
Query: 395    gacaaactgcaaactcgtttaagaggagaaggtggaattaaagcattgctgggaatggtt 454
              |||||||||||||| || || |||||||||||||| || |||||||||||||||||||| 
Sbjct: 102805 gacaaactgcaaacacggttgagaggagaaggtggcatcaaagcattgctgggaatggtc 102746

                                     
Query: 455    aagtgtggccatcctgatgtcct 477
              || || || || |||||||||||
Sbjct: 102745 aaatgcgggcaccctgatgtcct 102723



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                
Query: 1      agagcagagcaatggacctaaggcgccagtcgctaaactctttgagcaag 50
              |||||||||||||||||||||| ||||  | |||||||| ||||| ||||
Sbjct: 104294 agagcagagcaatggacctaagccgcccattgctaaactgtttgaacaag 104245

---

>ref|NM_100075.3| Arabidopsis thaliana ATP binding / microtubule motor AT1G01950 mRNA,
            complete cds
          Length = 2793

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 68/76 (89%)
 Strand = Plus / Plus

                                                                        
Query: 105  ttcatgccgtgaaagttgtcgcgaatctggcagctgaagaggcaaatcaagaaaagattg 164
            ||||||| ||||||||||| || ||||| ||||||||||||||||||||||||||||| |
Sbjct: 1961 ttcatgctgtgaaagttgtggccaatcttgcagctgaagaggcaaatcaagaaaagatcg 2020

                            
Query: 165  tggaagcaggtggcct 180
            | ||||| || |||||
Sbjct: 2021 ttgaagctggaggcct 2036



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 64/75 (85%)
 Strand = Plus / Plus

                                                                        
Query: 332  gatgcagaggacccacaaactctaagaatggtggctggagctattgctaacctgtgtggc 391
            |||||||| || ||||| ||| || | ||||| ||||| ||||||||||| || ||||||
Sbjct: 2188 gatgcagaagatccacagactttacgcatggttgctggggctattgctaatctctgtggc 2247

                           
Query: 392  aatgacaaactgcaa 406
            || ||||||||||||
Sbjct: 2248 aacgacaaactgcaa 2262

---

>gb|AC182651.2| Populus trichocarpa clone Pop1-118I23, complete sequence
          Length = 96071

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 62/73 (84%)
 Strand = Plus / Plus

                                                                         
Query: 197   ctgcttaggagctctgaggatgagaccatacgccgagtagcagcaggagcaattgctaat 256
             ||||| || |||||||||||||| ||||||    |||| |||||||| |||||||| |||
Sbjct: 47691 ctgctcagaagctctgaggatgaaaccatatatagagttgcagcaggtgcaattgccaat 47750

                          
Query: 257   cttgcaatgaatg 269
             ||||| |||||||
Sbjct: 47751 cttgctatgaatg 47763



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 269   gaaacgaaccaagatcttataatggctcaagg 300
             ||||| |||||||| || ||||||||||||||
Sbjct: 47894 gaaaccaaccaagagctaataatggctcaagg 47925

---

>dbj|AP006863.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT08G16, TM0934,
             complete sequence
          Length = 104894

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 70/85 (82%)
 Strand = Plus / Minus

                                                                         
Query: 59    cagaagatattgtcattacttgagtcggaagaacctgatgttcgtgttcatgccgtgaaa 118
             |||||||| |||||||| |||||  | |||||  ||||||| || || ||||| ||||||
Sbjct: 25217 cagaagattttgtcattgcttgaagcagaagatgctgatgtgcgagtccatgctgtgaaa 25158

                                      
Query: 119   gttgtcgcgaatctggcagctgaag 143
             ||||| || ||||| || |||||||
Sbjct: 25157 gttgtagcaaatctagctgctgaag 25133

---

>ref|NM_101115.2| Arabidopsis thaliana PAK; ATP binding / microtubule motor AT1G12430
            (PAK) mRNA, complete cds
          Length = 3216

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                    
Query: 245  gcaattgctaatcttgcaatgaatgaaacgaaccaagatcttataatggctcaagg 300
            ||||| || |||||||||||||||||||| ||||| || || || |||| ||||||
Sbjct: 2380 gcaatcgcaaatcttgcaatgaatgaaaccaaccaggagctgatcatggatcaagg 2435



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 68/83 (81%)
 Strand = Plus / Plus

                                                                        
Query: 105  ttcatgccgtgaaagttgtcgcgaatctggcagctgaagaggcaaatcaagaaaagattg 164
            ||||||| || ||||| || || |||||||| || ||||||||||||||  |  | ||||
Sbjct: 2240 ttcatgctgtcaaagtggtagcaaatctggctgccgaagaggcaaatcagcagcaaattg 2299

                                   
Query: 165  tggaagcaggtggcctcacttcc 187
            ||||||| ||||| || ||||||
Sbjct: 2300 tggaagctggtggtcttacttcc 2322

---

>gb|AF159052.1|AF159052 Arabidopsis thaliana kinesin-like protein mRNA, complete cds
          Length = 3234

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                    
Query: 245  gcaattgctaatcttgcaatgaatgaaacgaaccaagatcttataatggctcaagg 300
            ||||| || |||||||||||||||||||| ||||| || || || |||| ||||||
Sbjct: 2380 gcaatcgcaaatcttgcaatgaatgaaaccaaccaggagctgatcatggatcaagg 2435



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 68/83 (81%)
 Strand = Plus / Plus

                                                                        
Query: 105  ttcatgccgtgaaagttgtcgcgaatctggcagctgaagaggcaaatcaagaaaagattg 164
            ||||||| || ||||| || || |||||||| || ||||||||||||||  |  | ||||
Sbjct: 2240 ttcatgctgtcaaagtggtagcaaatctggctgccgaagaggcaaatcagcagcaaattg 2299

                                   
Query: 165  tggaagcaggtggcctcacttcc 187
            ||||||| ||||| || ||||||
Sbjct: 2300 tggaagctggtggtcttacttcc 2322

---

>emb|BX248586.1| Blochmannia floridanus complete genome; segment 3/3
          Length = 188557

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 229   ccgagtagcagcaggagcaattgctaa 255
             |||||||||||||||||| ||||||||
Sbjct: 38993 ccgagtagcagcaggagctattgctaa 39019

---

>gb|AC020622.3|F22M8 Sequence of BAC F22M8 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 47295

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                    
Query: 142   agaggcaaatcaagaaaagattgtggaagcaggtggcct 180
             ||||||||||||||||||||| || ||||| || |||||
Sbjct: 24510 agaggcaaatcaagaaaagatcgttgaagctggaggcct 24548



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                    
Query: 105   ttcatgccgtgaaagttgtcgcgaatctggcagctgaag 143
             ||||||| ||||||||||| || ||||| ||||||||||
Sbjct: 24374 ttcatgctgtgaaagttgtggccaatcttgcagctgaag 24412



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                         
Query: 332   gatgcagaggacccacaaactctaagaatggtggctggagctattgctaacctgtgtggc 391
             |||||||| || ||||| ||| || | ||||| ||||| ||||||||||| || ||||||
Sbjct: 24836 gatgcagaagatccacagactttacgcatggttgctggggctattgctaatctctgtggc 24895

               
Query: 392   aa 393
             ||
Sbjct: 24896 aa 24897

---

>ref|NM_115344.3| Arabidopsis thaliana ATP binding / microtubule motor AT3G54870 mRNA,
            complete cds
          Length = 3497

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                     
Query: 128  aatctggcagctgaagaggcaaatcaagaaaagattgtgga 168
            ||||| || ||||||||||| ||||| | ||||||||||||
Sbjct: 2482 aatctagccgctgaagaggctaatcaggtaaagattgtgga 2522



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                            
Query: 245  gcaattgctaatcttgcaatgaatgaaacgaaccaagatcttataatg 292
            |||||||||||| | |||||||| || | ||  |||||||||||||||
Sbjct: 2599 gcaattgctaatttagcaatgaacgagaagagtcaagatcttataatg 2646

---

>emb|BX000486.13| Zebrafish DNA sequence from clone DKEY-149M16 in linkage group 10,
             complete sequence
          Length = 195419

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 319   aatgacagcatctgatgcaga 339
             |||||||||||||||||||||
Sbjct: 30691 aatgacagcatctgatgcaga 30671

---

>gb|AC106047.5| Homo sapiens BAC clone RP11-293A21 from 4, complete sequence
          Length = 175918

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 139   tgaagaggcaaatcaagaaaa 159
             |||||||||||||||||||||
Sbjct: 43914 tgaagaggcaaatcaagaaaa 43894

---

>gb|AF402961.1| Oryza sativa chromosome 4 clone F8-40, genomic sequence
          Length = 37246

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 137   gctgaagaggcaaatcaaga 156
             ||||||||||||||||||||
Sbjct: 35369 gctgaagaggcaaatcaaga 35388

---

>ref|XM_870269.1| PREDICTED: Bos taurus similar to cullin 4A isoform 1 (LOC617935),
            mRNA
          Length = 4072

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 458  tgtggccatcctgatgtcct 477
            ||||||||||||||||||||
Sbjct: 1749 tgtggccatcctgatgtcct 1730

---

>gb|AC146144.2| Pan troglodytes BAC clone RP43-37J17 from 7, complete sequence
          Length = 206029

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 183    cttccctcctaatgctgctt 202
              ||||||||||||||||||||
Sbjct: 165050 cttccctcctaatgctgctt 165069

---

>gb|AC146041.2| Pan troglodytes BAC clone RP43-98A7 from 7, complete sequence
          Length = 120644

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 183   cttccctcctaatgctgctt 202
             ||||||||||||||||||||
Sbjct: 93173 cttccctcctaatgctgctt 93154

---

>gb|AC121590.2| Mus musculus BAC clone RP23-281L22 from 2, complete sequence
          Length = 167364

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 411   gtttaagaggagaaggtgga 430
             ||||||||||||||||||||
Sbjct: 45499 gtttaagaggagaaggtgga 45518

---

>emb|AL512652.18| Human DNA sequence from clone RP11-261P13 on chromosome 13 Contains the
             3' end of the IL17D gene for interleukin 17, a vovel gene,
             a RAN, member RAS oncogene family (RAN) pseudogene, the 3'
             end of the gene for likely ortholog of mouse exportin 4
             (XPO4) and 2 CpG islands, complete sequence
          Length = 135110

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 447   gaatggttaagtgtggccat 466
             ||||||||||||||||||||
Sbjct: 50404 gaatggttaagtgtggccat 50385

---

>gb|BT023786.1| Drosophila melanogaster HL05663 full insert cDNA
          Length = 2098

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 226 acgccgagtagcagcaggag 245
           ||||||||||||||||||||
Sbjct: 169 acgccgagtagcagcaggag 150

---

>gb|AY140910.1| Candidatus Fritschea bemisiae strain Falk YaeL (yaeL) gene, partial
            cds; putative glycosylhydrolase and putative transposase
            genes, complete cds; 16S ribosomal RNA and 23S ribosomal
            RNA genes, complete sequence; putative endonuclease gene,
            complete cds; 5S ribosomal RNA gene, complete sequence;
            argynyl tRNA synthetase (argS), YjeE (yjeE), probable
            GTP-binding protein, DNA polymerase III epsilon subunit,
            and phosphoglycerate kinase (pgk) genes, complete cds;
            and unknown gene
          Length = 16638

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 402  tgcaaactcgtttaagagga 421
            ||||||||||||||||||||
Sbjct: 8117 tgcaaactcgtttaagagga 8136

---

>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 89      gaacctgatgttcgtgttca 108
               ||||||||||||||||||||
Sbjct: 3608305 gaacctgatgttcgtgttca 3608324

---

>gb|AY118373.1| Drosophila melanogaster RE17794 full insert cDNA
          Length = 3005

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 226  acgccgagtagcagcaggag 245
            ||||||||||||||||||||
Sbjct: 1071 acgccgagtagcagcaggag 1052

---

>ref|NM_080076.2| Drosophila melanogaster lines CG11770-RA (lin), mRNA
          Length = 3650

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 234  tagcagcaggagcaattgct 253
            ||||||||||||||||||||
Sbjct: 984  tagcagcaggagcaattgct 1003

---

>ref|NM_079660.3| Drosophila melanogaster beaten path IIa CG14334-RA (beat-IIa), mRNA
          Length = 2987

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 226  acgccgagtagcagcaggag 245
            ||||||||||||||||||||
Sbjct: 1071 acgccgagtagcagcaggag 1052

---

>gb|AC090489.8| Genomic sequence for Mus musculus, clone RP23-104O10, complete sequence
          Length = 207424

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 235   agcagcaggagcaattgcta 254
             ||||||||||||||||||||
Sbjct: 99203 agcagcaggagcaattgcta 99222

---

>gb|AF325713.1|AF325713 Drosophila melanogaster beaten path IIa mRNA, complete cds
          Length = 2801

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 226 acgccgagtagcagcaggag 245
           ||||||||||||||||||||
Sbjct: 872 acgccgagtagcagcaggag 853

---

>gb|AF534407.1| Hildenbrandia crouanii isolate URUSW1 ribulose-1,5-bisphosphate
           carboxylase/oxygenase large subunit (rbcL) gene, partial
           cds; chloroplast gene for chloroplast product
          Length = 1010

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 238 agcaggagcaattgctaatc 257
           ||||||||||||||||||||
Sbjct: 963 agcaggagcaattgctaatc 982

---

>gb|AC007471.4|AC007471 Drosophila melanogaster, chromosome 2R, region 44F-45A, BAC clone
              BACR02C23, complete sequence
          Length = 168601

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 234    tagcagcaggagcaattgct 253
              ||||||||||||||||||||
Sbjct: 108631 tagcagcaggagcaattgct 108650

---

>gb|AC011763.6|AC011763 Drosophila melanogaster, chromosome 3R, region 90A-90A, BAC clone
              BACR48C05, complete sequence
          Length = 164450

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 226    acgccgagtagcagcaggag 245
              ||||||||||||||||||||
Sbjct: 115520 acgccgagtagcagcaggag 115539

---

>gb|AC159186.4| Mus musculus BAC clone RP24-281N15 from chromosome 12, complete
             sequence
          Length = 180125

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 383   ctgtgtggcaatgacaaact 402
             ||||||||||||||||||||
Sbjct: 22012 ctgtgtggcaatgacaaact 21993

---

>gb|AF272358.1|AF272358 Drosophila melanogaster lines mRNA, complete cds
          Length = 3416

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 234 tagcagcaggagcaattgct 253
           ||||||||||||||||||||
Sbjct: 748 tagcagcaggagcaattgct 767

---

>gb|BT021378.1| Drosophila melanogaster LD43682 full insert cDNA
          Length = 3604

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 234 tagcagcaggagcaattgct 253
           ||||||||||||||||||||
Sbjct: 917 tagcagcaggagcaattgct 936

---

>gb|AE003717.2| Drosophila melanogaster chromosome 3R, section 55 of 118 of the
             complete sequence
          Length = 217725

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 226   acgccgagtagcagcaggag 245
             ||||||||||||||||||||
Sbjct: 97231 acgccgagtagcagcaggag 97250

---

>gb|AE003835.4| Drosophila melanogaster chromosome 2R, section 15 of 73 of the complete
              sequence
          Length = 271696

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 234    tagcagcaggagcaattgct 253
              ||||||||||||||||||||
Sbjct: 121751 tagcagcaggagcaattgct 121770

---

>gb|AC006074.1|AC006074 Drosophila melanogaster, chromosome 2R, region 44F12-45A4, P1 clones
              DS05998, DS07727, DS05175, and DS01885, complete sequence
          Length = 204617

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 234    tagcagcaggagcaattgct 253
              ||||||||||||||||||||
Sbjct: 198598 tagcagcaggagcaattgct 198579

---

>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome
          Length = 4096345

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 89      gaacctgatgttcgtgttca 108
               ||||||||||||||||||||
Sbjct: 2590279 gaacctgatgttcgtgttca 2590260

---

>gb|DQ138794.1| Drosophila melanogaster strain Ral1 CG11770 gene, partial cds
          Length = 2520

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 234 tagcagcaggagcaattgct 253
           ||||||||||||||||||||
Sbjct: 435 tagcagcaggagcaattgct 454

---

>gb|AC170752.2| Mus musculus BAC clone RP23-116B8 from chromosome 10, complete
            sequence
          Length = 194054

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 235  agcagcaggagcaattgcta 254
            ||||||||||||||||||||
Sbjct: 6087 agcagcaggagcaattgcta 6106

---

>emb|AL732404.7| Mouse DNA sequence from clone RP23-177D21 on chromosome 2, complete
              sequence
          Length = 220275

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 411    gtttaagaggagaaggtgga 430
              ||||||||||||||||||||
Sbjct: 209206 gtttaagaggagaaggtgga 209225


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,402,999
Number of Sequences: 3902068
Number of extensions: 4402999
Number of successful extensions: 80537
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 80402
Number of HSP's gapped (non-prelim): 132
length of query: 477
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 455
effective length of database: 17,147,199,772
effective search space: 7801975896260
effective search space used: 7801975896260
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---