ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags4d02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009232.1| Triticum aestivum clone wle1n.pk0102.g9:fis, full... 260 1e-66
2gb|BT016439.1| Zea mays clone Contig272 mRNA sequence 170 8e-40
3gb|AY109400.1| Zea mays CL1052_1 mRNA sequence 161 8e-37
4ref|XM_469436.1| Oryza sativa (japonica cultivar-group), mRNA 151 8e-34
5gb|U28047.2|OSU28047 Oryza sativa beta-glucosidase mRNA, complet... 151 8e-34
6dbj|AK105026.2| Oryza sativa (japonica cultivar-group) cDNA clon... 151 8e-34
7dbj|AK103027.1| Oryza sativa (japonica cultivar-group) cDNA clon... 151 8e-34
8dbj|AK100165.1| Oryza sativa (japonica cultivar-group) cDNA clon... 151 8e-34
9dbj|AK059920.1| Oryza sativa (japonica cultivar-group) cDNA clon... 151 8e-34
10gb|AC091670.7| Oryza sativa (japonica cultivar-group) chromosome... 111 7e-22
11gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 111 7e-22
12gb|AC133334.8| Oryza sativa chromosome 3 BAC OSJNBa0004L11 genom... 111 7e-22
13dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 111 7e-22
14dbj|AK059517.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 3e-08
15ref|XM_469438.1| Oryza sativa (japonica cultivar-group), mRNA 62 5e-07
16gb|AC146567.10| Medicago truncatula clone mth2-99p24, complete s... 62 5e-07
17dbj|AK120790.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 5e-07
18dbj|AK105850.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 5e-07
19gb|DQ289594.1| Oncidium Gower Ramsey beta-mannosidase 2 mRNA, co... 56 3e-05
20gb|DQ289595.1| Oncidium Gower Ramsey beta-mannosidase 1 mRNA, co... 54 1e-04
21gb|DQ289593.1| Oncidium Gower Ramsey beta-mannosidase 3 mRNA, co... 54 1e-04
22gb|U95298.1|MEU95298 Manihot esculenta linamarase (pLIN-GEN) gen... 42 0.51
23gb|AC093416.2| Homo sapiens chromosome 3 clone RP11-659P16, comp... 40 2.0
24ref|XM_686254.1| PREDICTED: Danio rerio similar to LOC407679 pro... 40 2.0
25emb|BX649325.3| Zebrafish DNA sequence from clone DKEY-81F9 in l... 40 2.0
26gb|AC167129.5| Mus musculus chromosome 5, clone RP23-397D16, com... 38 7.9
27ref|NM_193750.1| Oryza sativa (japonica cultivar-group), predic... 38 7.9
28gb|AC166816.2| Mus musculus chromosome 5, clone RP24-321O22, com... 38 7.9
29gb|AY539926.1| Rattus norvegicus LRRGT00175 mRNA, complete cds 38 7.9
30gb|AC079456.28| Homo sapiens 12 BAC RP11-206B11 (Roswell Park Ca... 38 7.9
31gb|AE014305.1| Homo sapiens chromosome 13q34 schizophrenia regio... 38 7.9
32emb|CR710949.2|CNS0GBIP Tetraodon nigroviridis full-length cDNA 38 7.9
33gb|AC148758.19| Medicago truncatula clone mth2-50l17, complete s... 38 7.9
34gb|AC133864.32| Medicago truncatula clone mth2-18d12, complete s... 38 7.9
35emb|AL500522.9| Human DNA sequence from clone RP11-29O6 on chrom... 38 7.9
36emb|AL359642.12| Human DNA sequence from clone RP11-507F17 on ch... 38 7.9
37emb|AL353620.11| Human DNA sequence from clone RP11-485E1 on chr... 38 7.9
38gb|AF216314.1| Oryza sativa MAP kinase kinase 1 mRNA, complete cds 38 7.9
39gb|AC117385.3| Homo sapiens 3 BAC RP11-13I22 (Roswell Park Cance... 38 7.9
40gb|AC079098.5| Homo sapiens chromosome 8, clone RP11-157N24, com... 38 7.9
41ref|XM_684246.1| PREDICTED: Danio rerio similar to Gpr123 protei... 38 7.9
42gb|AC018687.6| Homo sapiens BAC clone RP11-462G22 from 4, comple... 38 7.9
43dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 38 7.9
44dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 38 7.9
45dbj|AP000039.1| Homo sapiens genomic DNA, chromosome 21q22.1, se... 38 7.9
46gb|AC067986.24| Homo sapiens chromosome 15, clone RP11-405A15, c... 38 7.9
47gb|AC068831.17| Homo sapiens chromosome 15, clone RP11-2O19, com... 38 7.9
48dbj|AP005099.2| Oryza sativa (japonica cultivar-group) genomic D... 38 7.9
49dbj|AP003077.3| Oryza sativa (japonica cultivar-group) genomic D... 38 7.9
50dbj|AP003435.2| Oryza sativa (japonica cultivar-group) genomic D... 38 7.9
51emb|AL954212.1| Pan troglodytes chromosome 22 clone RP43-043L10 ... 38 7.9
52emb|AL954211.1| Pan troglodytes chromosome 22 clone PTB-034G05 m... 38 7.9
53dbj|AK059461.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 7.9
54emb|CT574569.2| Pan troglodytes chromosome X clone CH251-17O16 m... 38 7.9
55dbj|AP001715.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 38 7.9
56emb|BX248124.7| Zebrafish DNA sequence from clone CH211-214E3 in... 38 7.9
57gb|AC003004.1|AC003004 Human Chromosome 15 cosmid C36, complete ... 38 7.9
58dbj|AP000281.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 38 7.9
59dbj|AP000183.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 38 7.9
60dbj|AP000107.1| Homo sapiens genomic DNA of 21q22.1, GART and AM... 38 7.9 
>gb|BT009232.1| Triticum aestivum clone wle1n.pk0102.g9:fis, full insert mRNA
           sequence
          Length = 1023

 Score =  260 bits (131), Expect = 1e-66
 Identities = 155/163 (95%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcactgccggtgggaactcagcaacagaaccttacattgttgctcacaattttctctt 60
           |||| |||||||||| |||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 37  atgcgctgccggtggcaactcagcaacagagccttacatcgttgctcacaattttctctt 96

                                                                       
Query: 61  agcacacggttatgcagttgcaagataccggaccaagtatcaggcagctcagaaggggaa 120
           |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 97  agcacatggttatgcagttgcaagataccggactaagtatcaggcagctcagaaggggaa 156

                                                      
Query: 121 ggttggtatagttctggatttcaactggtacgaggctcttacc 163
           |||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 157 ggttggaatagttctggacttcaactggtacgaggctcttacc 199
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>gb|BT016439.1| Zea mays clone Contig272 mRNA sequence
          Length = 1566

 Score =  170 bits (86), Expect = 8e-40
 Identities = 143/162 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcactgccggtgggaactcagcaacagaaccttacattgttgctcacaattttctctt 60
           |||| |||| |||||||| |||||||| ||||||||||| |||||||| |||||||||||
Sbjct: 520 atgcgctgctggtgggaattcagcaaccgaaccttacatagttgctcataattttctctt 579

                                                                       
Query: 61  agcacacggttatgcagttgcaagataccggaccaagtatcaggcagctcagaaggggaa 120
            ||||| | |  ||||||||||||||||||||| || |||||||| ||||||||||| ||
Sbjct: 580 ggcacatgctactgcagttgcaagataccggacgaaatatcaggctgctcagaagggtaa 639

                                                     
Query: 121 ggttggtatagttctggatttcaactggtacgaggctcttac 162
           ||| || ||||| ||||| |||||||||||||||||||||||
Sbjct: 640 ggtcggaatagtcctggacttcaactggtacgaggctcttac 681
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>gb|AY109400.1| Zea mays CL1052_1 mRNA sequence
          Length = 2031

 Score =  161 bits (81), Expect = 8e-37
 Identities = 138/157 (87%)
 Strand = Plus / Plus

                                                                       
Query: 6   ctgccggtgggaactcagcaacagaaccttacattgttgctcacaattttctcttagcac 65
           |||| |||||||| |||||||| |||||||| ||||||||||| ||||||||||| ||||
Sbjct: 522 ctgctggtgggaattcagcaacggaaccttatattgttgctcataattttctcttggcac 581

                                                                       
Query: 66  acggttatgcagttgcaagataccggaccaagtatcaggcagctcagaaggggaaggttg 125
           | | |  |||||||||||||||||| || || |||||||| ||||||||||| ||||| |
Sbjct: 582 atgctactgcagttgcaagataccgtacaaaatatcaggctgctcagaagggtaaggtcg 641

                                                
Query: 126 gtatagttctggatttcaactggtacgaggctcttac 162
           | ||||| ||||| |||||||||||||||||||||||
Sbjct: 642 gaatagtcctggacttcaactggtacgaggctcttac 678
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>ref|XM_469436.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1849

 Score =  151 bits (76), Expect = 8e-34
 Identities = 139/160 (86%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcactgccggtgggaactcagcaacagaaccttacattgttgctcacaattttctctt 60
           |||| |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 767 atgcgctgctggtgggaactcagcaacagaaccatacattgttgctcataattttctctt 826

                                                                       
Query: 61  agcacacggttatgcagttgcaagataccggaccaagtatcaggcagctcagaaggggaa 120
           | |||| | |   || ||||||||||||||||| |||||||||||||||||| | || ||
Sbjct: 827 atcacatgctgcagctgttgcaagataccggactaagtatcaggcagctcagcaaggcaa 886

                                                   
Query: 121 ggttggtatagttctggatttcaactggtacgaggctctt 160
            ||||| ||||||||||| ||||| ||||| || ||||||
Sbjct: 887 agttggaatagttctggacttcaattggtatgaagctctt 926
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>gb|U28047.2|OSU28047 Oryza sativa beta-glucosidase mRNA, complete cds
          Length = 1909

 Score =  151 bits (76), Expect = 8e-34
 Identities = 139/160 (86%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcactgccggtgggaactcagcaacagaaccttacattgttgctcacaattttctctt 60
           |||| |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 778 atgcgctgctggtgggaactcagcaacagaaccatacattgttgctcataattttctctt 837

                                                                       
Query: 61  agcacacggttatgcagttgcaagataccggaccaagtatcaggcagctcagaaggggaa 120
           | |||| | |   || ||||||||||||||||| |||||||||||||||||| | || ||
Sbjct: 838 atcacatgctgcagctgttgcaagataccggactaagtatcaggcagctcagcaaggcaa 897

                                                   
Query: 121 ggttggtatagttctggatttcaactggtacgaggctctt 160
            ||||| ||||||||||| ||||| ||||| || ||||||
Sbjct: 898 agttggaatagttctggacttcaattggtatgaagctctt 937
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>dbj|AK105026.2| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-H02, full
           insert sequence
          Length = 1846

 Score =  151 bits (76), Expect = 8e-34
 Identities = 139/160 (86%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcactgccggtgggaactcagcaacagaaccttacattgttgctcacaattttctctt 60
           |||| |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 770 atgcgctgctggtgggaactcagcaacagaaccatacattgttgctcataattttctctt 829

                                                                       
Query: 61  agcacacggttatgcagttgcaagataccggaccaagtatcaggcagctcagaaggggaa 120
           | |||| | |   || ||||||||||||||||| |||||||||||||||||| | || ||
Sbjct: 830 atcacatgctgcagctgttgcaagataccggactaagtatcaggcagctcagcaaggcaa 889

                                                   
Query: 121 ggttggtatagttctggatttcaactggtacgaggctctt 160
            ||||| ||||||||||| ||||| ||||| || ||||||
Sbjct: 890 agttggaatagttctggacttcaattggtatgaagctctt 929
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>dbj|AK103027.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117C01, full
           insert sequence
          Length = 1857

 Score =  151 bits (76), Expect = 8e-34
 Identities = 139/160 (86%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcactgccggtgggaactcagcaacagaaccttacattgttgctcacaattttctctt 60
           |||| |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 769 atgcgctgctggtgggaactcagcaacagaaccatacattgttgctcataattttctctt 828

                                                                       
Query: 61  agcacacggttatgcagttgcaagataccggaccaagtatcaggcagctcagaaggggaa 120
           | |||| | |   || ||||||||||||||||| |||||||||||||||||| | || ||
Sbjct: 829 atcacatgctgcagctgttgcaagataccggactaagtatcaggcagctcagcaaggcaa 888

                                                   
Query: 121 ggttggtatagttctggatttcaactggtacgaggctctt 160
            ||||| ||||||||||| ||||| ||||| || ||||||
Sbjct: 889 agttggaatagttctggacttcaattggtatgaagctctt 928
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>dbj|AK100165.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023021K07, full
           insert sequence
          Length = 1894

 Score =  151 bits (76), Expect = 8e-34
 Identities = 139/160 (86%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcactgccggtgggaactcagcaacagaaccttacattgttgctcacaattttctctt 60
           |||| |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 773 atgcgctgctggtgggaactcagcaacagaaccatacattgttgctcataattttctctt 832

                                                                       
Query: 61  agcacacggttatgcagttgcaagataccggaccaagtatcaggcagctcagaaggggaa 120
           | |||| | |   || ||||||||||||||||| |||||||||||||||||| | || ||
Sbjct: 833 atcacatgctgcagctgttgcaagataccggactaagtatcaggcagctcagcaaggcaa 892

                                                   
Query: 121 ggttggtatagttctggatttcaactggtacgaggctctt 160
            ||||| ||||||||||| ||||| ||||| || ||||||
Sbjct: 893 agttggaatagttctggacttcaattggtatgaagctctt 932
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>dbj|AK059920.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-G08, full
           insert sequence
          Length = 1302

 Score =  151 bits (76), Expect = 8e-34
 Identities = 139/160 (86%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcactgccggtgggaactcagcaacagaaccttacattgttgctcacaattttctctt 60
           |||| |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 214 atgcgctgctggtgggaactcagcaacagaaccatacattgttgctcataattttctctt 273

                                                                       
Query: 61  agcacacggttatgcagttgcaagataccggaccaagtatcaggcagctcagaaggggaa 120
           | |||| | |   || ||||||||||||||||| |||||||||||||||||| | || ||
Sbjct: 274 atcacatgctgcagctgttgcaagataccggactaagtatcaggcagctcagcaaggcaa 333

                                                   
Query: 121 ggttggtatagttctggatttcaactggtacgaggctctt 160
            ||||| ||||||||||| ||||| ||||| || ||||||
Sbjct: 334 agttggaatagttctggacttcaattggtatgaagctctt 373
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>gb|AC091670.7| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1212_C08
             map R2847, complete sequence
          Length = 100918

 Score =  111 bits (56), Expect = 7e-22
 Identities = 92/104 (88%)
 Strand = Plus / Minus

                                                                         
Query: 1     atgcactgccggtgggaactcagcaacagaaccttacattgttgctcacaattttctctt 60
             |||| |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 83020 atgcgctgctggtgggaactcagcaacagaaccatacattgttgctcataattttctctt 82961

                                                         
Query: 61    agcacacggttatgcagttgcaagataccggaccaagtatcagg 104
             | |||| | |   || ||||||||||||||||| ||||||||||
Sbjct: 82960 atcacatgctgcagctgttgcaagataccggactaagtatcagg 82917



 Score = 61.9 bits (31), Expect = 5e-07
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                        
Query: 6     ctgccggtgggaactcagcaacagaaccttacattgttgctca 48
             ||||||||||||||||||||||||| || || |||||||||||
Sbjct: 92258 ctgccggtgggaactcagcaacagagccatatattgttgctca 92216



 Score = 46.1 bits (23), Expect = 0.032
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                        
Query: 102   aggcagctcagaaggggaaggttggtatagttctggatttcaactggtacgaggctctt 160
             ||||||||||| | || || ||||| ||||||||||| ||||| ||||| || ||||||
Sbjct: 82666 aggcagctcagcaaggcaaagttggaatagttctggacttcaattggtatgaagctctt 82608
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  111 bits (56), Expect = 7e-22
 Identities = 92/104 (88%)
 Strand = Plus / Minus

                                                                            
Query: 1        atgcactgccggtgggaactcagcaacagaaccttacattgttgctcacaattttctctt 60
                |||| |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 27947292 atgcgctgctggtgggaactcagcaacagaaccatacattgttgctcataattttctctt 27947233

                                                            
Query: 61       agcacacggttatgcagttgcaagataccggaccaagtatcagg 104
                | |||| | |   || ||||||||||||||||| ||||||||||
Sbjct: 27947232 atcacatgctgcagctgttgcaagataccggactaagtatcagg 27947189



 Score = 61.9 bits (31), Expect = 5e-07
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                           
Query: 6        ctgccggtgggaactcagcaacagaaccttacattgttgctca 48
                ||||||||||||||||||||||||| || || |||||||||||
Sbjct: 27956530 ctgccggtgggaactcagcaacagagccatatattgttgctca 27956488



 Score = 46.1 bits (23), Expect = 0.032
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                           
Query: 102      aggcagctcagaaggggaaggttggtatagttctggatttcaactggtacgaggctctt 160
                ||||||||||| | || || ||||| ||||||||||| ||||| ||||| || ||||||
Sbjct: 27946938 aggcagctcagcaaggcaaagttggaatagttctggacttcaattggtatgaagctctt 27946880
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>gb|AC133334.8| Oryza sativa chromosome 3 BAC OSJNBa0004L11 genomic sequence, complete
             sequence
          Length = 133889

 Score =  111 bits (56), Expect = 7e-22
 Identities = 92/104 (88%)
 Strand = Plus / Plus

                                                                         
Query: 1     atgcactgccggtgggaactcagcaacagaaccttacattgttgctcacaattttctctt 60
             |||| |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 77734 atgcgctgctggtgggaactcagcaacagaaccatacattgttgctcataattttctctt 77793

                                                         
Query: 61    agcacacggttatgcagttgcaagataccggaccaagtatcagg 104
             | |||| | |   || ||||||||||||||||| ||||||||||
Sbjct: 77794 atcacatgctgcagctgttgcaagataccggactaagtatcagg 77837



 Score = 61.9 bits (31), Expect = 5e-07
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                        
Query: 6     ctgccggtgggaactcagcaacagaaccttacattgttgctca 48
             ||||||||||||||||||||||||| || || |||||||||||
Sbjct: 68496 ctgccggtgggaactcagcaacagagccatatattgttgctca 68538



 Score = 46.1 bits (23), Expect = 0.032
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                        
Query: 102   aggcagctcagaaggggaaggttggtatagttctggatttcaactggtacgaggctctt 160
             ||||||||||| | || || ||||| ||||||||||| ||||| ||||| || ||||||
Sbjct: 78088 aggcagctcagcaaggcaaagttggaatagttctggacttcaattggtatgaagctctt 78146
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  111 bits (56), Expect = 7e-22
 Identities = 92/104 (88%)
 Strand = Plus / Minus

                                                                            
Query: 1        atgcactgccggtgggaactcagcaacagaaccttacattgttgctcacaattttctctt 60
                |||| |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 28038616 atgcgctgctggtgggaactcagcaacagaaccatacattgttgctcataattttctctt 28038557

                                                            
Query: 61       agcacacggttatgcagttgcaagataccggaccaagtatcagg 104
                | |||| | |   || ||||||||||||||||| ||||||||||
Sbjct: 28038556 atcacatgctgcagctgttgcaagataccggactaagtatcagg 28038513



 Score = 61.9 bits (31), Expect = 5e-07
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                           
Query: 6        ctgccggtgggaactcagcaacagaaccttacattgttgctca 48
                ||||||||||||||||||||||||| || || |||||||||||
Sbjct: 28047854 ctgccggtgggaactcagcaacagagccatatattgttgctca 28047812



 Score = 46.1 bits (23), Expect = 0.032
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                           
Query: 102      aggcagctcagaaggggaaggttggtatagttctggatttcaactggtacgaggctctt 160
                ||||||||||| | || || ||||| ||||||||||| ||||| ||||| || ||||||
Sbjct: 28038262 aggcagctcagcaaggcaaagttggaatagttctggacttcaattggtatgaagctctt 28038204
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>dbj|AK059517.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-C01, full
           insert sequence
          Length = 1336

 Score = 65.9 bits (33), Expect = 3e-08
 Identities = 117/145 (80%)
 Strand = Plus / Plus

                                                                       
Query: 6   ctgccggtgggaactcagcaacagaaccttacattgttgctcacaattttctcttagcac 65
           ||||||||||||||||||||||||| || || ||||||||||| ||| |  ||||| | |
Sbjct: 43  ctgccggtgggaactcagcaacagagccatatattgttgctcataatatcatcttatctc 102

                                                                       
Query: 66  acggttatgcagttgcaagataccggaccaagtatcaggcagctcagaaggggaaggttg 125
           | | |  ||||||||  |||||||| | |||||  ||||||  |||||| || ||||| |
Sbjct: 103 atgctactgcagttgatagataccgtaacaagttccaggcaagtcagaaaggcaaggtcg 162

                                    
Query: 126 gtatagttctggatttcaactggta 150
           | |||||||| ||||| || |||||
Sbjct: 163 gaatagttctcgattttaattggta 187
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>ref|XM_469438.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2080

 Score = 61.9 bits (31), Expect = 5e-07
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                      
Query: 6   ctgccggtgggaactcagcaacagaaccttacattgttgctca 48
           ||||||||||||||||||||||||| || || |||||||||||
Sbjct: 787 ctgccggtgggaactcagcaacagagccatatattgttgctca 829
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>gb|AC146567.10| Medicago truncatula clone mth2-99p24, complete sequence
          Length = 141672

 Score = 61.9 bits (31), Expect = 5e-07
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                     
Query: 14     gggaactcagcaacagaaccttacattgttgctcacaat 52
              ||||||||||| || ||||||||||||||||||||||||
Sbjct: 135726 gggaactcagctactgaaccttacattgttgctcacaat 135764
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>dbj|AK120790.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023011K21, full
           insert sequence
          Length = 2082

 Score = 61.9 bits (31), Expect = 5e-07
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                      
Query: 6   ctgccggtgggaactcagcaacagaaccttacattgttgctca 48
           ||||||||||||||||||||||||| || || |||||||||||
Sbjct: 789 ctgccggtgggaactcagcaacagagccatatattgttgctca 831
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>dbj|AK105850.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-G08, full
           insert sequence
          Length = 1387

 Score = 61.9 bits (31), Expect = 5e-07
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                      
Query: 6   ctgccggtgggaactcagcaacagaaccttacattgttgctca 48
           ||||||||||||||||||||||||| || || |||||||||||
Sbjct: 172 ctgccggtgggaactcagcaacagagccatatattgttgctca 214
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>gb|DQ289594.1| Oncidium Gower Ramsey beta-mannosidase 2 mRNA, complete cds
          Length = 1669

 Score = 56.0 bits (28), Expect = 3e-05
 Identities = 52/60 (86%)
 Strand = Plus / Plus

                                                                       
Query: 2   tgcactgccggtgggaactcagcaacagaaccttacattgttgctcacaattttctctta 61
           |||||||| ||||| |||||  | |||||||||||||||||||| |||||| || |||||
Sbjct: 678 tgcactgcaggtggcaactcgactacagaaccttacattgttgcccacaatcttatctta 737
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>gb|DQ289595.1| Oncidium Gower Ramsey beta-mannosidase 1 mRNA, complete cds
          Length = 1700

 Score = 54.0 bits (27), Expect = 1e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                              
Query: 2   tgcactgccggtgggaactcagcaacagaaccttacattgttgctcacaat 52
           |||||||| ||||| |||||  | |||||||||||||||||||| ||||||
Sbjct: 709 tgcactgctggtggcaactctactacagaaccttacattgttgcccacaat 759
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>gb|DQ289593.1| Oncidium Gower Ramsey beta-mannosidase 3 mRNA, complete cds
          Length = 1639

 Score = 54.0 bits (27), Expect = 1e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                              
Query: 2   tgcactgccggtgggaactcagcaacagaaccttacattgttgctcacaat 52
           |||||||| ||||| |||||  | |||||||||||||||||||| ||||||
Sbjct: 648 tgcactgctggtggcaactctactacagaaccttacattgttgcccacaat 698
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>gb|U95298.1|MEU95298 Manihot esculenta linamarase (pLIN-GEN) gene, complete cds
          Length = 2782

 Score = 42.1 bits (21), Expect = 0.51
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                 
Query: 18   actcagcaacagaaccttacattgttgctcacaattt 54
            ||||||| |||||||||||||| ||||| || |||||
Sbjct: 1281 actcagctacagaaccttacatagttgcccataattt 1317
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>gb|AC093416.2| Homo sapiens chromosome 3 clone RP11-659P16, complete sequence
          Length = 189308

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 128    atagttctggatttcaactg 147
              ||||||||||||||||||||
Sbjct: 113200 atagttctggatttcaactg 113219
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>ref|XM_686254.1| PREDICTED: Danio rerio similar to LOC407679 protein (LOC562885), mRNA
          Length = 4161

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 92   accaagtatcaggcagctcagaag 115
            |||||||| |||||||||||||||
Sbjct: 1567 accaagtaccaggcagctcagaag 1590
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>emb|BX649325.3| Zebrafish DNA sequence from clone DKEY-81F9 in linkage group 24,
             complete sequence
          Length = 169135

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 92    accaagtatcaggcagctcagaag 115
             |||||||| |||||||||||||||
Sbjct: 26099 accaagtaccaggcagctcagaag 26122
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>gb|AC167129.5| Mus musculus chromosome 5, clone RP23-397D16, complete sequence
          Length = 197551

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 102    aggcagctcagaaggggaa 120
              |||||||||||||||||||
Sbjct: 173091 aggcagctcagaaggggaa 173073
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>ref|NM_193750.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1080

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 109 tcagaaggggaaggttggt 127
           |||||||||||||||||||
Sbjct: 811 tcagaaggggaaggttggt 829
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>gb|AC166816.2| Mus musculus chromosome 5, clone RP24-321O22, complete sequence
          Length = 156357

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 102    aggcagctcagaaggggaa 120
              |||||||||||||||||||
Sbjct: 143987 aggcagctcagaaggggaa 144005
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>gb|AY539926.1| Rattus norvegicus LRRGT00175 mRNA, complete cds
          Length = 1074

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 12  gtgggaactcagcaacagaacct 34
           ||||||||||||| |||||||||
Sbjct: 644 gtgggaactcagccacagaacct 666
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>gb|AC079456.28| Homo sapiens 12 BAC RP11-206B11 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 177640

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 118    gaaggttggtatagttctggatt 140
              ||||||||||||||| |||||||
Sbjct: 103625 gaaggttggtatagtcctggatt 103603
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>gb|AE014305.1| Homo sapiens chromosome 13q34 schizophrenia region contig 1 section 2 of
              11 of the complete sequence
          Length = 613322

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 42     ttgctcacaattttctctt 60
              |||||||||||||||||||
Sbjct: 500016 ttgctcacaattttctctt 500034
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>emb|CR710949.2|CNS0GBIP Tetraodon nigroviridis full-length cDNA
          Length = 564

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 105 cagctcagaaggggaaggt 123
           |||||||||||||||||||
Sbjct: 350 cagctcagaaggggaaggt 332
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>gb|AC148758.19| Medicago truncatula clone mth2-50l17, complete sequence
          Length = 128831

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 33    cttacattgttgctcacaatttt 55
             ||||||||||||||| |||||||
Sbjct: 22275 cttacattgttgctcccaatttt 22297
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>gb|AC133864.32| Medicago truncatula clone mth2-18d12, complete sequence
          Length = 125734

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 26     acagaaccttacattgttgctca 48
              |||||||| ||||||||||||||
Sbjct: 109246 acagaaccctacattgttgctca 109224
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>emb|AL500522.9| Human DNA sequence from clone RP11-29O6 on chromosome X Contains the 5'
             end of a novel gene and a pseudogene similar to part of
             ribosomal protein S7 (RPS7), complete sequence
          Length = 82604

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 126   gtatagttctggatttcaa 144
             |||||||||||||||||||
Sbjct: 52781 gtatagttctggatttcaa 52763
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>emb|AL359642.12| Human DNA sequence from clone RP11-507F17 on chromosome 9 Contains a
             kertain pseudogene, complete sequence
          Length = 122613

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 39    ttgttgctcacaattttct 57
             |||||||||||||||||||
Sbjct: 51838 ttgttgctcacaattttct 51820
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>emb|AL353620.11| Human DNA sequence from clone RP11-485E1 on chromosome 13, complete
             sequence
          Length = 139079

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 42    ttgctcacaattttctctt 60
             |||||||||||||||||||
Sbjct: 32668 ttgctcacaattttctctt 32686
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>gb|AF216314.1| Oryza sativa MAP kinase kinase 1 mRNA, complete cds
          Length = 1443

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 109 tcagaaggggaaggttggt 127
           |||||||||||||||||||
Sbjct: 943 tcagaaggggaaggttggt 961
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>gb|AC117385.3| Homo sapiens 3 BAC RP11-13I22 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 168186

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 41    gttgctcacaattttctcttagc 63
             |||||||| ||||||||||||||
Sbjct: 23841 gttgctcaaaattttctcttagc 23819
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>gb|AC079098.5| Homo sapiens chromosome 8, clone RP11-157N24, complete sequence
          Length = 158119

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 106   agctcagaaggggaaggtt 124
             |||||||||||||||||||
Sbjct: 50044 agctcagaaggggaaggtt 50062
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>ref|XM_684246.1| PREDICTED: Danio rerio similar to Gpr123 protein (LOC560847), mRNA
          Length = 2511

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 100  tcaggcagctcagaaggggaagg 122
            ||||||||||| |||||||||||
Sbjct: 1798 tcaggcagctctgaaggggaagg 1776
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>gb|AC018687.6| Homo sapiens BAC clone RP11-462G22 from 4, complete sequence
          Length = 156378

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 108    ctcagaaggggaaggttgg 126
              |||||||||||||||||||
Sbjct: 144436 ctcagaaggggaaggttgg 144454
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 119      aaggttggtatagttctgg 137
                |||||||||||||||||||
Sbjct: 28859295 aaggttggtatagttctgg 28859313
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 109      tcagaaggggaaggttggt 127
                |||||||||||||||||||
Sbjct: 17903579 tcagaaggggaaggttggt 17903597
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>dbj|AP000039.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 10/28, complete
             sequence
          Length = 100000

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 110   cagaaggggaaggttggta 128
             |||||||||||||||||||
Sbjct: 64823 cagaaggggaaggttggta 64841
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>gb|AC067986.24| Homo sapiens chromosome 15, clone RP11-405A15, complete sequence
          Length = 18256

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 111   agaaggggaaggttggtat 129
             |||||||||||||||||||
Sbjct: 14016 agaaggggaaggttggtat 14034
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>gb|AC068831.17| Homo sapiens chromosome 15, clone RP11-2O19, complete sequence
          Length = 136975

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 111 agaaggggaaggttggtat 129
           |||||||||||||||||||
Sbjct: 574 agaaggggaaggttggtat 592
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>dbj|AP005099.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0008J01
          Length = 159900

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 119    aaggttggtatagttctgg 137
              |||||||||||||||||||
Sbjct: 116981 aaggttggtatagttctgg 116999
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>dbj|AP003077.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0520B06
          Length = 142667

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 109   tcagaaggggaaggttggt 127
             |||||||||||||||||||
Sbjct: 23414 tcagaaggggaaggttggt 23432
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>dbj|AP003435.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0455H03
          Length = 175947

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 109    tcagaaggggaaggttggt 127
              |||||||||||||||||||
Sbjct: 150701 tcagaaggggaaggttggt 150719
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>emb|AL954212.1| Pan troglodytes chromosome 22 clone RP43-043L10 map 22q22.11,
            complete sequence
          Length = 192328

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 110  cagaaggggaaggttggta 128
            |||||||||||||||||||
Sbjct: 1049 cagaaggggaaggttggta 1067
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>emb|AL954211.1| Pan troglodytes chromosome 22 clone PTB-034G05 map 22q22.11, complete
             sequence
          Length = 138573

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 110   cagaaggggaaggttggta 128
             |||||||||||||||||||
Sbjct: 97484 cagaaggggaaggttggta 97502
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>dbj|AK059461.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-C11, full
            insert sequence
          Length = 1580

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 109  tcagaaggggaaggttggt 127
            |||||||||||||||||||
Sbjct: 1053 tcagaaggggaaggttggt 1071
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>emb|CT574569.2| Pan troglodytes chromosome X clone CH251-17O16 map Xq28, complete
              sequence
          Length = 178497

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 126    gtatagttctggatttcaa 144
              |||||||||||||||||||
Sbjct: 123063 gtatagttctggatttcaa 123045
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>dbj|AP001715.1| Homo sapiens genomic DNA, chromosome 21q, section 59/105
          Length = 340000

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 110    cagaaggggaaggttggta 128
              |||||||||||||||||||
Sbjct: 129973 cagaaggggaaggttggta 129991
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>emb|BX248124.7| Zebrafish DNA sequence from clone CH211-214E3 in linkage group 12,
              complete sequence
          Length = 211571

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 100    tcaggcagctcagaaggggaagg 122
              ||||||||||| |||||||||||
Sbjct: 100600 tcaggcagctctgaaggggaagg 100622
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>gb|AC003004.1|AC003004 Human Chromosome 15 cosmid C36, complete sequence
          Length = 33550

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 111  agaaggggaaggttggtat 129
            |||||||||||||||||||
Sbjct: 9898 agaaggggaaggttggtat 9880
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>dbj|AP000281.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region,
            clone:T1588, complete sequence
          Length = 66129

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 110  cagaaggggaaggttggta 128
            |||||||||||||||||||
Sbjct: 8882 cagaaggggaaggttggta 8900
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>dbj|AP000183.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone
             Q78C10-f32E9, segment 10/21, complete sequence
          Length = 100000

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 110   cagaaggggaaggttggta 128
             |||||||||||||||||||
Sbjct: 70799 cagaaggggaaggttggta 70817
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>dbj|AP000107.1| Homo sapiens genomic DNA of 21q22.1, GART and AML related,
             Q78C10-149C3 region, segment 10/20, complete sequence
          Length = 100000

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 110   cagaaggggaaggttggta 128
             |||||||||||||||||||
Sbjct: 70799 cagaaggggaaggttggta 70817


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,238,340
Number of Sequences: 3902068
Number of extensions: 1238340
Number of successful extensions: 80340
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 80146
Number of HSP's gapped (non-prelim): 184
length of query: 163
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 141
effective length of database: 17,147,199,772
effective search space: 2417755167852
effective search space used: 2417755167852
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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