| Clone Name | bags4c05 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB164396.1| Hordeum vulgare HvMS mRNA for methionine synthase, complete cds Length = 2558 Score = 365 bits (184), Expect = 5e-98 Identities = 224/244 (91%) Strand = Plus / Plus Query: 1 ttcccacagaccgtggagctcaggagagtccnccgtgagtacaaggcaaagaagatctct 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1326 ttcccacagaccgtggagctcaggagagtccgccgtgagtacaaggcaaagaagatctct 1385 Query: 61 gaggaggagtacaccaatgccatcaaggaggagatcancaaggttgtcaagatccaanaa 120 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 1386 gaggaggagtacaccaatgccatcaaggaggagatcagcaaggttgtcaagatccaagaa 1445 Query: 121 nagcttgacattgatgtgctcnngcacgganagcctganaggaacnatatggntgagtac 180 |||||||||||||||||||| ||||||| ||||||| |||||| |||||| ||||||| Sbjct: 1446 gagcttgacattgatgtgctcgtgcacggagagcctgagaggaacgatatggttgagtac 1505 Query: 181 tttggngagcanctctctgnnttcacattcactgccaatggatgnnnncaatcttatngn 240 ||||| ||||| ||||||| ||||||||||||||||||||||| ||||||||| | Sbjct: 1506 tttggtgagcagctctctggtttcacattcactgccaatggatgggtgcaatcttatgga 1565 Query: 241 tcaa 244 |||| Sbjct: 1566 tcaa 1569
>emb|AM039904.1| Hordeum vulgare mRNA for methionine synthase 1 enzyme (ms1 gene) Length = 2642 Score = 333 bits (168), Expect = 2e-88 Identities = 220/244 (90%) Strand = Plus / Plus Query: 1 ttcccacagaccgtggagctcaggagagtccnccgtgagtacaaggcaaagaagatctct 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| Sbjct: 1371 ttcccacagaccgtggagctcaggagagtccgccgtgagtacaaggcaaagaaaatctcg 1430 Query: 61 gaggaggagtacaccaatgccatcaaggaggagatcancaaggttgtcaagatccaanaa 120 |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 1431 gaggaggaatacaccaatgccatcaaggaggagatcagcaaggttgtcaagatccaagaa 1490 Query: 121 nagcttgacattgatgtgctcnngcacgganagcctganaggaacnatatggntgagtac 180 |||||||||| ||||||||| ||||||| ||||||| |||||| |||||| ||||||| Sbjct: 1491 gagcttgacatcgatgtgctcgtgcacggagagcctgagaggaacgatatggttgagtac 1550 Query: 181 tttggngagcanctctctgnnttcacattcactgccaatggatgnnnncaatcttatngn 240 ||||| ||||| ||||||| ||||||||||||||||||||||| ||||||||| | Sbjct: 1551 tttggtgagcagctctctggtttcacattcactgccaatggatgggtgcaatcttatgga 1610 Query: 241 tcaa 244 |||| Sbjct: 1611 tcaa 1614
>dbj|AK099069.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013163D13, full insert sequence Length = 2640 Score = 220 bits (111), Expect = 2e-54 Identities = 201/237 (84%) Strand = Plus / Plus Query: 1 ttcccacagaccgtggagctcaggagagtccnccgtgagtacaaggcaaagaagatctct 60 ||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 1388 ttcccacagactgtggagctcaggagagtccgccgtgagtacaaggcaaaaaagatctct 1447 Query: 61 gaggaggagtacaccaatgccatcaaggaggagatcancaaggttgtcaagatccaanaa 120 ||||||||||||| || ||||||||||||||| |||| ||||||||| |||||||| || Sbjct: 1448 gaggaggagtacatcagtgccatcaaggaggaaatcagcaaggttgttaagatccaggaa 1507 Query: 121 nagcttgacattgatgtgctcnngcacgganagcctganaggaacnatatggntgagtac 180 |||||||||| ||||| || ||||| ||||||| || ||| |||||| ||||||| Sbjct: 1508 gagcttgacatcgatgtccttgttcacggcgagcctgagagaaacgatatggttgagtac 1567 Query: 181 tttggngagcanctctctgnnttcacattcactgccaatggatgnnnncaatcttat 237 || || ||||| || |||| || ||||||||||||| ||||| ||||||||| Sbjct: 1568 ttcggtgagcagctttctggttttgcattcactgccaacggatgggtgcaatcttat 1624
>dbj|AK067958.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128E22, full insert sequence Length = 2058 Score = 220 bits (111), Expect = 2e-54 Identities = 201/237 (84%) Strand = Plus / Plus Query: 1 ttcccacagaccgtggagctcaggagagtccnccgtgagtacaaggcaaagaagatctct 60 ||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 755 ttcccacagactgtggagctcaggagagtccgccgtgagtacaaggcaaaaaagatctct 814 Query: 61 gaggaggagtacaccaatgccatcaaggaggagatcancaaggttgtcaagatccaanaa 120 ||||||||||||| || ||||||||||||||| |||| ||||||||| |||||||| || Sbjct: 815 gaggaggagtacatcagtgccatcaaggaggaaatcagcaaggttgttaagatccaggaa 874 Query: 121 nagcttgacattgatgtgctcnngcacgganagcctganaggaacnatatggntgagtac 180 |||||||||| ||||| || ||||| ||||||| || ||| |||||| ||||||| Sbjct: 875 gagcttgacatcgatgtccttgttcacggcgagcctgagagaaacgatatggttgagtac 934 Query: 181 tttggngagcanctctctgnnttcacattcactgccaatggatgnnnncaatcttat 237 || || ||||| || |||| || ||||||||||||| ||||| ||||||||| Sbjct: 935 ttcggtgagcagctttctggttttgcattcactgccaacggatgggtgcaatcttat 991
>dbj|AK065255.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002J12, full insert sequence Length = 2668 Score = 220 bits (111), Expect = 2e-54 Identities = 201/237 (84%) Strand = Plus / Plus Query: 1 ttcccacagaccgtggagctcaggagagtccnccgtgagtacaaggcaaagaagatctct 60 ||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 1387 ttcccacagactgtggagctcaggagagtccgccgtgagtacaaggcaaaaaagatctct 1446 Query: 61 gaggaggagtacaccaatgccatcaaggaggagatcancaaggttgtcaagatccaanaa 120 ||||||||||||| || ||||||||||||||| |||| ||||||||| |||||||| || Sbjct: 1447 gaggaggagtacatcagtgccatcaaggaggaaatcagcaaggttgttaagatccaggaa 1506 Query: 121 nagcttgacattgatgtgctcnngcacgganagcctganaggaacnatatggntgagtac 180 |||||||||| ||||| || ||||| ||||||| || ||| |||||| ||||||| Sbjct: 1507 gagcttgacatcgatgtccttgttcacggcgagcctgagagaaacgatatggttgagtac 1566 Query: 181 tttggngagcanctctctgnnttcacattcactgccaatggatgnnnncaatcttat 237 || || ||||| || |||| || ||||||||||||| ||||| ||||||||| Sbjct: 1567 ttcggtgagcagctttctggttttgcattcactgccaacggatgggtgcaatcttat 1623
>dbj|AK067757.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116H17, full insert sequence Length = 2627 Score = 218 bits (110), Expect = 7e-54 Identities = 192/224 (85%) Strand = Plus / Plus Query: 1 ttcccacagaccgtggagctcaggagagtccnccgtgagtacaaggcaaagaagatctct 60 ||||||||||| ||||||||||||||||||| ||||||||||||||| || ||||||||| Sbjct: 1388 ttcccacagactgtggagctcaggagagtccgccgtgagtacaaggctaaaaagatctct 1447 Query: 61 gaggaggagtacaccaatgccatcaaggaggagatcancaaggttgtcaagatccaanaa 120 ||||| |||||| || ||||||||||||||| |||| ||||||||| |||||||| || Sbjct: 1448 gaggatgagtacgtcagtgccatcaaggaggaaatcagcaaggttgttaagatccaggaa 1507 Query: 121 nagcttgacattgatgtgctcnngcacgganagcctganaggaacnatatggntgagtac 180 ||||||||||||||||||| ||||| ||||||| || ||| |||||| ||||||| Sbjct: 1508 gagcttgacattgatgtgcttgttcacggcgagcctgagagaaacgatatggttgagtac 1567 Query: 181 tttggngagcanctctctgnnttcacattcactgccaatggatg 224 ||||| ||||| || |||| || |||| |||||||||||||| Sbjct: 1568 tttggtgagcagctttctggttttgcatttactgccaatggatg 1611
>dbj|AK067726.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116O11, full insert sequence Length = 2783 Score = 218 bits (110), Expect = 7e-54 Identities = 192/224 (85%) Strand = Plus / Plus Query: 1 ttcccacagaccgtggagctcaggagagtccnccgtgagtacaaggcaaagaagatctct 60 ||||||||||| ||||||||||||||||||| ||||||||||||||| || ||||||||| Sbjct: 1507 ttcccacagactgtggagctcaggagagtccgccgtgagtacaaggctaaaaagatctct 1566 Query: 61 gaggaggagtacaccaatgccatcaaggaggagatcancaaggttgtcaagatccaanaa 120 ||||| |||||| || ||||||||||||||| |||| ||||||||| |||||||| || Sbjct: 1567 gaggatgagtacgtcagtgccatcaaggaggaaatcagcaaggttgttaagatccaggaa 1626 Query: 121 nagcttgacattgatgtgctcnngcacgganagcctganaggaacnatatggntgagtac 180 ||||||||||||||||||| ||||| ||||||| || ||| |||||| ||||||| Sbjct: 1627 gagcttgacattgatgtgcttgttcacggcgagcctgagagaaacgatatggttgagtac 1686 Query: 181 tttggngagcanctctctgnnttcacattcactgccaatggatg 224 ||||| ||||| || |||| || |||| |||||||||||||| Sbjct: 1687 tttggtgagcagctttctggttttgcatttactgccaatggatg 1730
>gb|AF439723.1|AF439723 Zea mays methionine synthase mRNA, partial cds Length = 2300 Score = 180 bits (91), Expect = 2e-42 Identities = 185/221 (83%) Strand = Plus / Plus Query: 1 ttcccacagaccgtggagctcaggagagtccnccgtgagtacaaggcaaagaagatctct 60 |||||||| ||||| ||||||||||| |||| |||||||||||||||||| ||||||||| Sbjct: 1321 ttcccacaaaccgttgagctcaggagggtccgccgtgagtacaaggcaaaaaagatctct 1380 Query: 61 gaggaggagtacaccaatgccatcaaggaggagatcancaaggttgtcaagatccaanaa 120 |||||||| ||| || ||||||||||||||| |||| |||||| || ||| | ||| || Sbjct: 1381 gaggaggaatacgtcactgccatcaaggaggaaatcaacaaggtcgttaagcttcaagaa 1440 Query: 121 nagcttgacattgatgtgctcnngcacgganagcctganaggaacnatatggntgagtac 180 ||||||||||||||||||| ||| || ||||||| || ||| |||||| ||||||| Sbjct: 1441 gagcttgacattgatgtgcttgtgcatggcgagcctgagagaaacgatatggttgagtac 1500 Query: 181 tttggngagcanctctctgnnttcacattcactgccaatgg 221 || || ||||| ||||| | || | |||||||||||||| Sbjct: 1501 ttcggtgagcagctctccggttttgcgttcactgccaatgg 1541
>gb|BT016781.1| Zea mays clone Contig614 mRNA sequence Length = 1759 Score = 172 bits (87), Expect = 4e-40 Identities = 195/237 (82%) Strand = Plus / Plus Query: 1 ttcccacagaccgtggagctcaggagagtccnccgtgagtacaaggcaaagaagatctct 60 ||||| ||||| ||||| |||||||| |||| |||||||||||||||||||||||||| Sbjct: 424 ttccctcagactgtggaactcaggagggtccgtcgtgagtacaaggcaaagaagatctcc 483 Query: 61 gaggaggagtacaccaatgccatcaaggaggagatcancaaggttgtcaagatccaanaa 120 |||||||| |||| || |||||||||||| || |||| ||||||||||||||||||| | Sbjct: 484 gaggaggaatacatcagtgccatcaaggaagaaatcagcaaggttgtcaagatccaagag 543 Query: 121 nagcttgacattgatgtgctcnngcacgganagcctganaggaacnatatggntgagtac 180 ||||||||||||||||||| ||| ||| |||| || || || | |||| ||||||| Sbjct: 544 gagcttgacattgatgtgcttgtgcatggagagccagagagaaatgacatggttgagtac 603 Query: 181 tttggngagcanctctctgnnttcacattcactgccaatggatgnnnncaatcttat 237 || || ||||| | |||| || ||||||||||||| ||||| ||||||||| Sbjct: 604 ttcggtgagcaattatctggttttgcattcactgccaacggatgggtgcaatcttat 660
>gb|AY104793.1| Zea mays PCO079166 mRNA sequence Length = 2720 Score = 163 bits (82), Expect = 4e-37 Identities = 161/191 (84%) Strand = Plus / Plus Query: 1 ttcccacagaccgtggagctcaggagagtccnccgtgagtacaaggcaaagaagatctct 60 ||||| ||||| ||||| |||||||| |||| |||||||||||||||||||||||||| Sbjct: 1430 ttccctcagactgtggaactcaggagggtccgtcgtgagtacaaggcaaagaagatctcc 1489 Query: 61 gaggaggagtacaccaatgccatcaaggaggagatcancaaggttgtcaagatccaanaa 120 |||||||| |||| || |||||||||||| || |||| ||||||||||||||||||| | Sbjct: 1490 gaggaggaatacatcagtgccatcaaggaagaaatcagcaaggttgtcaagatccaagag 1549 Query: 121 nagcttgacattgatgtgctcnngcacgganagcctganaggaacnatatggntgagtac 180 ||||||||||||||||||| ||| ||| |||| || || || | |||| ||||||| Sbjct: 1550 gagcttgacattgatgtgcttgtgcatggagagccagagagaaatgacatggttgagtac 1609 Query: 181 tttggngagca 191 || || ||||| Sbjct: 1610 ttcggtgagca 1620
>gb|BT009353.1| Triticum aestivum clone wlm96.pk0018.c10:fis, full insert mRNA sequence Length = 2634 Score = 155 bits (78), Expect = 9e-35 Identities = 184/224 (82%) Strand = Plus / Plus Query: 1 ttcccacagaccgtggagctcaggagagtccnccgtgagtacaaggcaaagaagatctct 60 ||||| ||||| |||| |||||||| |||| ||||||||||||||| |||||||||||| Sbjct: 1395 ttccctcagacaatggacctcaggagggtccgccgtgagtacaaggcgaagaagatctct 1454 Query: 61 gaggaggagtacaccaatgccatcaaggaggagatcancaaggttgtcaagatccaanaa 120 ||||||||||| || ||| |||||||| || || | ||||||||||||||||||| | Sbjct: 1455 gaggaggagtatgtcagtgctatcaaggaagaaattagcaaggttgtcaagatccaagag 1514 Query: 121 nagcttgacattgatgtgctcnngcacgganagcctganaggaacnatatggntgagtac 180 |||||||||| ||||||||| || ||| ||||||| || || | |||| ||||||| Sbjct: 1515 gagcttgacatcgatgtgctcgtccatggagagcctgagagaaatgacatggttgagtac 1574 Query: 181 tttggngagcanctctctgnnttcacattcactgccaatggatg 224 ||||| ||||| | |||| || |||| |||||||||||||| Sbjct: 1575 tttggcgagcaattatctggttttgcatttactgccaatggatg 1618
>emb|AM039905.1| Hordeum vulgare mRNA for methionine synthase 2 enzyme (ms2 gene) Length = 2675 Score = 155 bits (78), Expect = 9e-35 Identities = 184/224 (82%) Strand = Plus / Plus Query: 1 ttcccacagaccgtggagctcaggagagtccnccgtgagtacaaggcaaagaagatctct 60 ||||| ||||| |||| |||||||| |||| ||||||||||||||| |||||||||||| Sbjct: 1404 ttccctcagacaatggacctcaggagggtccgccgtgagtacaaggcgaagaagatctct 1463 Query: 61 gaggaggagtacaccaatgccatcaaggaggagatcancaaggttgtcaagatccaanaa 120 |||||||| || || ||| |||||||| || || | ||||||||||||||||||| | Sbjct: 1464 gaggaggactatgtcagtgctatcaaggaagaaattagcaaggttgtcaagatccaagag 1523 Query: 121 nagcttgacattgatgtgctcnngcacgganagcctganaggaacnatatggntgagtac 180 |||||||||| ||||||||| || ||| ||||||| || || | |||| ||||||| Sbjct: 1524 gagcttgacatcgatgtgctcgtccatggagagcctgagagaaatgacatggttgagtac 1583 Query: 181 tttggngagcanctctctgnnttcacattcactgccaatggatg 224 ||||| ||||| || |||| || |||| |||||||||||||| Sbjct: 1584 tttggcgagcaactatctggttttgcatttactgccaatggatg 1627
>gb|AY109415.1| Zea mays CL598_2 mRNA sequence Length = 3017 Score = 153 bits (77), Expect = 3e-34 Identities = 180/221 (81%) Strand = Plus / Minus Query: 1 ttcccacagaccgtggagctcaggagagtccnccgtgagtacaaggcaaagaagatctct 60 |||||||| ||||| ||||||||||| |||| ||||||||||||||| ||||||| Sbjct: 1610 ttcccacaaaccgttgagctcaggagggtccgccgtgagtacaaggcnnnnnngatctct 1551 Query: 61 gaggaggagtacaccaatgccatcaaggaggagatcancaaggttgtcaagatccaanaa 120 |||||||| ||| || ||||||||||||||| |||| |||||| || ||| | ||| || Sbjct: 1550 gaggaggaatacgtcactgccatcaaggaggaaatcaacaaggtcgttaagcttcaagaa 1491 Query: 121 nagcttgacattgatgtgctcnngcacgganagcctganaggaacnatatggntgagtac 180 ||||||||||||||||||| ||| || ||||||| || ||| |||||| ||||||| Sbjct: 1490 gagcttgacattgatgtgcttgtgcatggcgagcctgaaagaaacgatatggttgagtac 1431 Query: 181 tttggngagcanctctctgnnttcacattcactgccaatgg 221 || || ||||| ||||| | || | |||||||||||||| Sbjct: 1430 ttcggtgagcagctctccggttttgcgttcactgccaatgg 1390
>dbj|AB221011.1| Beta vulgaris BvMS1 mRNA for methionine synthase, complete cds Length = 2720 Score = 147 bits (74), Expect = 2e-32 Identities = 159/191 (83%) Strand = Plus / Plus Query: 1 ttcccacagaccgtggagctcaggagagtccnccgtgagtacaaggcaaagaagatctct 60 |||||||| || |||||||| ||||| || | ||||| |||||||| |||||||| || Sbjct: 1410 ttcccacaaactgtggagcttaggagggtgcgtcgtgaatacaaggccaagaagatttcc 1469 Query: 61 gaggaggagtacaccaatgccatcaaggaggagatcancaaggttgtcaagatccaanaa 120 ||||| ||||| ||| ||||||||||||||||||| ||||||||| ||| ||||| || Sbjct: 1470 gaggaagagtatgtcaaggccatcaaggaggagatcaacaaggttgtaaagctccaagaa 1529 Query: 121 nagcttgacattgatgtgctcnngcacgganagcctganaggaacnatatggntgagtac 180 | |||||||||||||| ||| |||||| ||||||| |||||| |||||| ||||||| Sbjct: 1530 gaacttgacattgatgttctcgttcacggagagcctgagaggaacgatatggttgagtac 1589 Query: 181 tttggngagca 191 || || ||||| Sbjct: 1590 ttcggagagca 1600
>gb|AF082893.1| Solanum tuberosum methionine synthase (MS) mRNA, complete cds Length = 2644 Score = 133 bits (67), Expect = 3e-28 Identities = 190/237 (80%) Strand = Plus / Plus Query: 1 ttcccacagaccgtggagctcaggagagtccnccgtgagtacaaggcaaagaagatctct 60 ||||| ||||| |||||||| |||||||| | ||||| |||||||| |||||||||||| Sbjct: 1374 ttccctcagacagtggagcttaggagagttcgtcgtgaatacaaggccaagaagatctct 1433 Query: 61 gaggaggagtacaccaatgccatcaaggaggagatcancaaggttgtcaagatccaanaa 120 ||||||||||| || ||||||| ||||| |||| ||||||||| | |||| || Sbjct: 1434 gaggaggagtatgttaaggccatcaccgaggaaatcaagaaggttgtcgatctccaggaa 1493 Query: 121 nagcttgacattgatgtgctcnngcacgganagcctganaggaacnatatggntgagtac 180 | |||||||||||||| | |||||| ||||||| |||||| |||||| ||||||| Sbjct: 1494 gaacttgacattgatgtcttggttcacggagagcctgagaggaacgatatggttgagtac 1553 Query: 181 tttggngagcanctctctgnnttcacattcactgccaatggatgnnnncaatcttat 237 || || ||||| ||||||| || | ||||||||||||||||| ||||||||| Sbjct: 1554 ttcggagagcagctctctggttttgctttcactgccaatggatgggttcaatcttat 1610
>ref|NM_111249.3| Arabidopsis thaliana 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase AT3G03780 transcript variant AT3G03780.1 mRNA, complete cds Length = 2615 Score = 131 bits (66), Expect = 1e-27 Identities = 157/191 (82%) Strand = Plus / Plus Query: 1 ttcccacagaccgtggagctcaggagagtccnccgtgagtacaaggcaaagaagatctct 60 ||||||||||||||||| ||||||||||| | |||||| |||||||| ||||| |||||| Sbjct: 1397 ttcccacagaccgtggaactcaggagagttcgccgtgaatacaaggccaagaaaatctct 1456 Query: 61 gaggaggagtacaccaatgccatcaaggaggagatcancaaggttgtcaagatccaanaa 120 || ||||| ||| ||| ||||||||||| ||||||| || ||||| | |||||| | Sbjct: 1457 gaagaggattacgtcaaggccatcaaggaagagatcaagaaagttgttgacatccaagag 1516 Query: 121 nagcttgacattgatgtgctcnngcacgganagcctganaggaacnatatggntgagtac 180 | |||||||||||||| || |||||| ||||||| || ||| | |||| ||||||| Sbjct: 1517 gaccttgacattgatgttcttgttcacggagagcctgagagaaacgacatggttgagtac 1576 Query: 181 tttggngagca 191 ||||| ||||| Sbjct: 1577 tttggagagca 1587
>ref|NM_180176.1| Arabidopsis thaliana 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase AT3G03780 transcript variant AT3G03780.2 mRNA, complete cds Length = 2608 Score = 131 bits (66), Expect = 1e-27 Identities = 157/191 (82%) Strand = Plus / Plus Query: 1 ttcccacagaccgtggagctcaggagagtccnccgtgagtacaaggcaaagaagatctct 60 ||||||||||||||||| ||||||||||| | |||||| |||||||| ||||| |||||| Sbjct: 1390 ttcccacagaccgtggaactcaggagagttcgccgtgaatacaaggccaagaaaatctct 1449 Query: 61 gaggaggagtacaccaatgccatcaaggaggagatcancaaggttgtcaagatccaanaa 120 || ||||| ||| ||| ||||||||||| ||||||| || ||||| | |||||| | Sbjct: 1450 gaagaggattacgtcaaggccatcaaggaagagatcaagaaagttgttgacatccaagag 1509 Query: 121 nagcttgacattgatgtgctcnngcacgganagcctganaggaacnatatggntgagtac 180 | |||||||||||||| || |||||| ||||||| || ||| | |||| ||||||| Sbjct: 1510 gaccttgacattgatgttcttgttcacggagagcctgagagaaacgacatggttgagtac 1569 Query: 181 tttggngagca 191 ||||| ||||| Sbjct: 1570 tttggagagca 1580
>gb|AY150385.1| Arabidopsis thaliana putative methionine synthase (At3g03780) mRNA, complete cds Length = 2329 Score = 131 bits (66), Expect = 1e-27 Identities = 157/191 (82%) Strand = Plus / Plus Query: 1 ttcccacagaccgtggagctcaggagagtccnccgtgagtacaaggcaaagaagatctct 60 ||||||||||||||||| ||||||||||| | |||||| |||||||| ||||| |||||| Sbjct: 1318 ttcccacagaccgtggaactcaggagagttcgccgtgaatacaaggccaagaaaatctct 1377 Query: 61 gaggaggagtacaccaatgccatcaaggaggagatcancaaggttgtcaagatccaanaa 120 || ||||| ||| ||| ||||||||||| ||||||| || ||||| | |||||| | Sbjct: 1378 gaagaggattacgtcaaggccatcaaggaagagatcaagaaagttgttgacatccaagag 1437 Query: 121 nagcttgacattgatgtgctcnngcacgganagcctganaggaacnatatggntgagtac 180 | |||||||||||||| || |||||| ||||||| || ||| | |||| ||||||| Sbjct: 1438 gaccttgacattgatgttcttgttcacggagagcctgagagaaacgacatggttgagtac 1497 Query: 181 tttggngagca 191 ||||| ||||| Sbjct: 1498 tttggagagca 1508
>gb|AY040010.1| Arabidopsis thaliana putative methionine synthase (At3g03780) mRNA, complete cds Length = 2599 Score = 131 bits (66), Expect = 1e-27 Identities = 157/191 (82%) Strand = Plus / Plus Query: 1 ttcccacagaccgtggagctcaggagagtccnccgtgagtacaaggcaaagaagatctct 60 ||||||||||||||||| ||||||||||| | |||||| |||||||| ||||| |||||| Sbjct: 1390 ttcccacagaccgtggaactcaggagagttcgccgtgaatacaaggccaagaaaatctct 1449 Query: 61 gaggaggagtacaccaatgccatcaaggaggagatcancaaggttgtcaagatccaanaa 120 || ||||| ||| ||| ||||||||||| ||||||| || ||||| | |||||| | Sbjct: 1450 gaagaggattacgtcaaggccatcaaggaagagatcaagaaagttgttgacatccaagag 1509 Query: 121 nagcttgacattgatgtgctcnngcacgganagcctganaggaacnatatggntgagtac 180 | |||||||||||||| || |||||| ||||||| || ||| | |||| ||||||| Sbjct: 1510 gaccttgacattgatgttcttgttcacggagagcctgagagaaacgacatggttgagtac 1569 Query: 181 tttggngagca 191 ||||| ||||| Sbjct: 1570 tttggagagca 1580
>emb|AJ608674.1| Arabidopsis thaliana mRNA for cobalamin-independent methionine synthase (atms2 gene) Length = 2328 Score = 131 bits (66), Expect = 1e-27 Identities = 157/191 (82%) Strand = Plus / Plus Query: 1 ttcccacagaccgtggagctcaggagagtccnccgtgagtacaaggcaaagaagatctct 60 ||||||||||||||||| ||||||||||| | |||||| |||||||| ||||| |||||| Sbjct: 1323 ttcccacagaccgtggaactcaggagagttcgccgtgaatacaaggccaagaaaatctct 1382 Query: 61 gaggaggagtacaccaatgccatcaaggaggagatcancaaggttgtcaagatccaanaa 120 || ||||| ||| ||| ||||||||||| ||||||| || ||||| | |||||| | Sbjct: 1383 gaagaggattacgtcaaggccatcaaggaagagatcaagaaagttgttgacatccaagag 1442 Query: 121 nagcttgacattgatgtgctcnngcacgganagcctganaggaacnatatggntgagtac 180 | |||||||||||||| || |||||| ||||||| || ||| | |||| ||||||| Sbjct: 1443 gaccttgacattgatgttcttgttcacggagagcctgagagaaacgacatggttgagtac 1502 Query: 181 tttggngagca 191 ||||| ||||| Sbjct: 1503 tttggagagca 1513
>emb|BX825589.1|CNS0A4R8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL46ZE05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2560 Score = 131 bits (66), Expect = 1e-27 Identities = 157/191 (82%) Strand = Plus / Plus Query: 1 ttcccacagaccgtggagctcaggagagtccnccgtgagtacaaggcaaagaagatctct 60 ||||||||||||||||| ||||||||||| | |||||| |||||||| ||||| |||||| Sbjct: 1385 ttcccacagaccgtggaactcaggagagttcgccgtgaatacaaggccaagaaaatctct 1444 Query: 61 gaggaggagtacaccaatgccatcaaggaggagatcancaaggttgtcaagatccaanaa 120 || ||||| ||| ||| ||||||||||| ||||||| || ||||| | |||||| | Sbjct: 1445 gaagaggattacgtcaaggccatcaaggaagagatcaagaaagttgttgacatccaagag 1504 Query: 121 nagcttgacattgatgtgctcnngcacgganagcctganaggaacnatatggntgagtac 180 | |||||||||||||| || |||||| ||||||| || ||| | |||| ||||||| Sbjct: 1505 gaccttgacattgatgttcttgttcacggagagcctgagagaaacgacatggttgagtac 1564 Query: 181 tttggngagca 191 ||||| ||||| Sbjct: 1565 tttggagagca 1575
>gb|AY084559.1| Arabidopsis thaliana clone 111720 mRNA, complete sequence Length = 2611 Score = 131 bits (66), Expect = 1e-27 Identities = 157/191 (82%) Strand = Plus / Plus Query: 1 ttcccacagaccgtggagctcaggagagtccnccgtgagtacaaggcaaagaagatctct 60 ||||||||||||||||| ||||||||||| | |||||| |||||||| ||||| |||||| Sbjct: 1397 ttcccacagaccgtggaactcaggagagttcgccgtgaatacaaggccaagaaaatctct 1456 Query: 61 gaggaggagtacaccaatgccatcaaggaggagatcancaaggttgtcaagatccaanaa 120 || ||||| ||| ||| ||||||||||| ||||||| || ||||| | |||||| | Sbjct: 1457 gaagaggattacgtcaaggccatcaaggaagagatcaagaaagttgttgacatccaagag 1516 Query: 121 nagcttgacattgatgtgctcnngcacgganagcctganaggaacnatatggntgagtac 180 | |||||||||||||| || |||||| ||||||| || ||| | |||| ||||||| Sbjct: 1517 gaccttgacattgatgttcttgttcacggagagcctgagagaaacgacatggttgagtac 1576 Query: 181 tttggngagca 191 ||||| ||||| Sbjct: 1577 tttggagagca 1587
>emb|X83499.1|CRMETS C.roseus MetE mRNA for methionine synthase Length = 2602 Score = 115 bits (58), Expect = 7e-23 Identities = 105/122 (86%) Strand = Plus / Plus Query: 16 gagctcaggagagtccnccgtgagtacaaggcaaagaagatctctgaggaggagtacacc 75 ||||| |||||||| | ||||||||||||||| |||||||| |||||||| || || Sbjct: 1383 gagcttaggagagttcgccgtgagtacaaggccaagaagatttctgaggatgattatgtt 1442 Query: 76 aatgccatcaaggaggagatcancaaggttgtcaagatccaanaanagcttgacattgat 135 || |||||||||||||| |||| ||||||||||||| ||||| || |||||||||||||| Sbjct: 1443 aaggccatcaaggaggaaatcagcaaggttgtcaagctccaagaagagcttgacattgat 1502 Query: 136 gt 137 || Sbjct: 1503 gt 1504
>gb|BC034830.1| Mus musculus cDNA clone MGC:28753 IMAGE:4483004, complete cds Length = 2755 Score = 113 bits (57), Expect = 3e-22 Identities = 131/158 (82%) Strand = Plus / Plus Query: 1 ttcccacagaccgtggagctcaggagagtccnccgtgagtacaaggcaaagaagatctct 60 |||||||| || |||||||| ||||| || | ||||| |||||||| |||||||| || Sbjct: 1380 ttcccacaaactgtggagcttaggagggtgcgtcgtgaatacaaggccaagaagatttcc 1439 Query: 61 gaggaggagtacaccaatgccatcaaggaggagatcancaaggttgtcaagatccaanaa 120 ||||| ||||| ||| ||||||||||||||||||| ||||||||| ||| ||||| || Sbjct: 1440 gaggaagagtatgtcaaggccatcaaggaggagatcaacaaggttgtaaagctccaagaa 1499 Query: 121 nagcttgacattgatgtgctcnngcacgganagcctga 158 | |||||||||||||| ||| |||||| ||||||| Sbjct: 1500 gaacttgacattgatgttctcgttcacggagagcctga 1537
>gb|BC032196.1| Mus musculus cDNA clone MGC:38244 IMAGE:5324059, complete cds Length = 2766 Score = 113 bits (57), Expect = 3e-22 Identities = 131/158 (82%) Strand = Plus / Plus Query: 1 ttcccacagaccgtggagctcaggagagtccnccgtgagtacaaggcaaagaagatctct 60 |||||||| || |||||||| ||||| || | ||||| |||||||| |||||||| || Sbjct: 1391 ttcccacaaactgtggagcttaggagggtgcgtcgtgaatacaaggccaagaagatttcc 1450 Query: 61 gaggaggagtacaccaatgccatcaaggaggagatcancaaggttgtcaagatccaanaa 120 ||||| ||||| ||| ||||||||||||||||||| ||||||||| ||| ||||| || Sbjct: 1451 gaggaagagtatgtcaaggccatcaaggaggagatcaacaaggttgtaaagctccaagaa 1510 Query: 121 nagcttgacattgatgtgctcnngcacgganagcctga 158 | |||||||||||||| ||| |||||| ||||||| Sbjct: 1511 gaacttgacattgatgttctcgttcacggagagcctga 1548
>gb|U84889.1|MCU84889 Mesembryanthemum crystallinum methionine synthase (MetE) mRNA, complete cds Length = 2734 Score = 109 bits (55), Expect = 5e-21 Identities = 134/164 (81%) Strand = Plus / Plus Query: 28 gtccnccgtgagtacaaggcaaagaagatctctgaggaggagtacaccaatgccatcaag 87 |||| ||||||||||||||| |||||||| ||||| ||||||||| ||| ||||||||| Sbjct: 1465 gtccgccgtgagtacaaggccaagaagatttctgaagaggagtacgtcaaggccatcaag 1524 Query: 88 gaggagatcancaaggttgtcaagatccaanaanagcttgacattgatgtgctcnngcac 147 || ||||| | ||||||||||||| |||| || | |||||||| ||||| || ||| Sbjct: 1525 gaagagattagcaaggttgtcaagctccaggaagaacttgacatcgatgtccttgtacac 1584 Query: 148 gganagcctganaggaacnatatggntgagtactttggngagca 191 ||| ||||||| || || | |||| ||||||||| || ||||| Sbjct: 1585 ggagagcctgagagaaatgacatggttgagtacttcggagagca 1628
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 101 bits (51), Expect = 1e-18 Identities = 75/84 (89%) Strand = Plus / Plus Query: 54 gatctctgaggaggagtacaccaatgccatcaaggaggagatcancaaggttgtcaagat 113 |||||||||||||||||||| || ||||||||||||||| |||| ||||||||| ||||| Sbjct: 26683015 gatctctgaggaggagtacatcagtgccatcaaggaggaaatcagcaaggttgttaagat 26683074 Query: 114 ccaanaanagcttgacattgatgt 137 ||| || |||||||||| ||||| Sbjct: 26683075 ccaggaagagcttgacatcgatgt 26683098 Score = 99.6 bits (50), Expect = 4e-18 Identities = 77/87 (88%) Strand = Plus / Plus Query: 54 gatctctgaggaggagtacaccaatgccatcaaggaggagatcancaaggttgtcaagat 113 |||||||||||| |||||| || ||||||||||||||| |||| ||||||||| ||||| Sbjct: 26694839 gatctctgaggatgagtacgtcagtgccatcaaggaggaaatcagcaaggttgttaagat 26694898 Query: 114 ccaanaanagcttgacattgatgtgct 140 ||| || ||||||||||||||||||| Sbjct: 26694899 ccaggaagagcttgacattgatgtgct 26694925 Score = 85.7 bits (43), Expect = 7e-14 Identities = 48/50 (96%) Strand = Plus / Plus Query: 1 ttcccacagaccgtggagctcaggagagtccnccgtgagtacaaggcaaa 50 ||||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 26682884 ttcccacagactgtggagctcaggagagtccgccgtgagtacaaggcaaa 26682933 Score = 79.8 bits (40), Expect = 4e-12 Identities = 45/47 (95%) Strand = Plus / Plus Query: 1 ttcccacagaccgtggagctcaggagagtccnccgtgagtacaaggc 47 ||||||||||| ||||||||||||||||||| ||||||||||||||| Sbjct: 26694706 ttcccacagactgtggagctcaggagagtccgccgtgagtacaaggc 26694752 Score = 56.0 bits (28), Expect = 6e-05 Identities = 52/62 (83%) Strand = Plus / Plus Query: 163 aacnatatggntgagtactttggngagcanctctctgnnttcacattcactgccaatgga 222 ||| |||||| |||||||||||| ||||| || |||| || |||| |||||||||||| Sbjct: 26695100 aacgatatggttgagtactttggtgagcagctttctggttttgcatttactgccaatgga 26695159 Query: 223 tg 224 || Sbjct: 26695160 tg 26695161 Score = 50.1 bits (25), Expect = 0.004 Identities = 60/75 (80%) Strand = Plus / Plus Query: 163 aacnatatggntgagtactttggngagcanctctctgnnttcacattcactgccaatgga 222 ||| |||||| ||||||||| || ||||| || |||| || ||||||||||||| ||| Sbjct: 26683272 aacgatatggttgagtacttcggtgagcagctttctggttttgcattcactgccaacgga 26683331 Query: 223 tgnnnncaatcttat 237 || ||||||||| Sbjct: 26683332 tgggtgcaatcttat 26683346
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 101 bits (51), Expect = 1e-18 Identities = 75/84 (89%) Strand = Plus / Plus Query: 54 gatctctgaggaggagtacaccaatgccatcaaggaggagatcancaaggttgtcaagat 113 |||||||||||||||||||| || ||||||||||||||| |||| ||||||||| ||||| Sbjct: 26611184 gatctctgaggaggagtacatcagtgccatcaaggaggaaatcagcaaggttgttaagat 26611243 Query: 114 ccaanaanagcttgacattgatgt 137 ||| || |||||||||| ||||| Sbjct: 26611244 ccaggaagagcttgacatcgatgt 26611267 Score = 99.6 bits (50), Expect = 4e-18 Identities = 77/87 (88%) Strand = Plus / Plus Query: 54 gatctctgaggaggagtacaccaatgccatcaaggaggagatcancaaggttgtcaagat 113 |||||||||||| |||||| || ||||||||||||||| |||| ||||||||| ||||| Sbjct: 26623008 gatctctgaggatgagtacgtcagtgccatcaaggaggaaatcagcaaggttgttaagat 26623067 Query: 114 ccaanaanagcttgacattgatgtgct 140 ||| || ||||||||||||||||||| Sbjct: 26623068 ccaggaagagcttgacattgatgtgct 26623094 Score = 85.7 bits (43), Expect = 7e-14 Identities = 48/50 (96%) Strand = Plus / Plus Query: 1 ttcccacagaccgtggagctcaggagagtccnccgtgagtacaaggcaaa 50 ||||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 26611053 ttcccacagactgtggagctcaggagagtccgccgtgagtacaaggcaaa 26611102 Score = 79.8 bits (40), Expect = 4e-12 Identities = 45/47 (95%) Strand = Plus / Plus Query: 1 ttcccacagaccgtggagctcaggagagtccnccgtgagtacaaggc 47 ||||||||||| ||||||||||||||||||| ||||||||||||||| Sbjct: 26622875 ttcccacagactgtggagctcaggagagtccgccgtgagtacaaggc 26622921 Score = 56.0 bits (28), Expect = 6e-05 Identities = 52/62 (83%) Strand = Plus / Plus Query: 163 aacnatatggntgagtactttggngagcanctctctgnnttcacattcactgccaatgga 222 ||| |||||| |||||||||||| ||||| || |||| || |||| |||||||||||| Sbjct: 26623269 aacgatatggttgagtactttggtgagcagctttctggttttgcatttactgccaatgga 26623328 Query: 223 tg 224 || Sbjct: 26623329 tg 26623330 Score = 50.1 bits (25), Expect = 0.004 Identities = 60/75 (80%) Strand = Plus / Plus Query: 163 aacnatatggntgagtactttggngagcanctctctgnnttcacattcactgccaatgga 222 ||| |||||| ||||||||| || ||||| || |||| || ||||||||||||| ||| Sbjct: 26611441 aacgatatggttgagtacttcggtgagcagctttctggttttgcattcactgccaacgga 26611500 Query: 223 tgnnnncaatcttat 237 || ||||||||| Sbjct: 26611501 tgggtgcaatcttat 26611515
>emb|BX072547.2|CNS09S4Q Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBb0090N22 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 8623 Score = 101 bits (51), Expect = 1e-18 Identities = 75/84 (89%) Strand = Plus / Plus Query: 54 gatctctgaggaggagtacaccaatgccatcaaggaggagatcancaaggttgtcaagat 113 |||||||||||||||||||| || ||||||||||||||| |||| ||||||||| ||||| Sbjct: 1599 gatctctgaggaggagtacatcagtgccatcaaggaggaaatcagcaaggttgttaagat 1658 Query: 114 ccaanaanagcttgacattgatgt 137 ||| || |||||||||| ||||| Sbjct: 1659 ccaggaagagcttgacatcgatgt 1682 Score = 85.7 bits (43), Expect = 7e-14 Identities = 48/50 (96%) Strand = Plus / Plus Query: 1 ttcccacagaccgtggagctcaggagagtccnccgtgagtacaaggcaaa 50 ||||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 1468 ttcccacagactgtggagctcaggagagtccgccgtgagtacaaggcaaa 1517 Score = 50.1 bits (25), Expect = 0.004 Identities = 60/75 (80%) Strand = Plus / Plus Query: 163 aacnatatggntgagtactttggngagcanctctctgnnttcacattcactgccaatgga 222 ||| |||||| ||||||||| || ||||| || |||| || ||||||||||||| ||| Sbjct: 1856 aacgatatggttgagtacttcggtgagcagctttctggttttgcattcactgccaacgga 1915 Query: 223 tgnnnncaatcttat 237 || ||||||||| Sbjct: 1916 tgggtgcaatcttat 1930
>gb|AF466201.1| Sorghum bicolor clone SBTXS_0032H17 putative cytochrome P450-like protein, putative DNA-binding protein homolog, TATA-binding protein, hypothetical protein M3E9.200, 3-glucanase, K-exchanger-like protein, small heat shock-like protein, methionine synthase protein, putative far-red impaired response protein, and putative vegetative storage protein genes, complete cds Length = 100773 Score = 99.6 bits (50), Expect = 4e-18 Identities = 77/87 (88%) Strand = Plus / Minus Query: 54 gatctctgaggaggagtacaccaatgccatcaaggaggagatcancaaggttgtcaagat 113 ||||||||||||||| |||| || |||||||||||| || || | ||||||||||||||| Sbjct: 74071 gatctctgaggaggaatacatcagtgccatcaaggaagaaattagcaaggttgtcaagat 74012 Query: 114 ccaanaanagcttgacattgatgtgct 140 |||| | ||||||||||||||||||| Sbjct: 74011 ccaagaggagcttgacattgatgtgct 73985 Score = 58.0 bits (29), Expect = 1e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 19 ctcaggagagtccnccgtgagtacaaggcaaagaag 54 |||||||| |||| |||||||||||||||||||||| Sbjct: 74181 ctcaggagggtccgccgtgagtacaaggcaaagaag 74146
>emb|AL731889.5|CNS08C8T Oryza sativa chromosome 12, . BAC OJ1122_G07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 83015 Score = 99.6 bits (50), Expect = 4e-18 Identities = 77/87 (88%) Strand = Plus / Minus Query: 54 gatctctgaggaggagtacaccaatgccatcaaggaggagatcancaaggttgtcaagat 113 |||||||||||| |||||| || ||||||||||||||| |||| ||||||||| ||||| Sbjct: 76288 gatctctgaggatgagtacgtcagtgccatcaaggaggaaatcagcaaggttgttaagat 76229 Query: 114 ccaanaanagcttgacattgatgtgct 140 ||| || ||||||||||||||||||| Sbjct: 76228 ccaggaagagcttgacattgatgtgct 76202 Score = 79.8 bits (40), Expect = 4e-12 Identities = 45/47 (95%) Strand = Plus / Minus Query: 1 ttcccacagaccgtggagctcaggagagtccnccgtgagtacaaggc 47 ||||||||||| ||||||||||||||||||| ||||||||||||||| Sbjct: 76421 ttcccacagactgtggagctcaggagagtccgccgtgagtacaaggc 76375 Score = 56.0 bits (28), Expect = 6e-05 Identities = 52/62 (83%) Strand = Plus / Minus Query: 163 aacnatatggntgagtactttggngagcanctctctgnnttcacattcactgccaatgga 222 ||| |||||| |||||||||||| ||||| || |||| || |||| |||||||||||| Sbjct: 76027 aacgatatggttgagtactttggtgagcagctttctggttttgcatttactgccaatgga 75968 Query: 223 tg 224 || Sbjct: 75967 tg 75966
>emb|BX000561.2|CNS08CE7 Oryza sativa chromosome 12, . BAC OJ1014_F06 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104849 Score = 99.6 bits (50), Expect = 4e-18 Identities = 77/87 (88%) Strand = Plus / Minus Query: 54 gatctctgaggaggagtacaccaatgccatcaaggaggagatcancaaggttgtcaagat 113 |||||||||||| |||||| || ||||||||||||||| |||| ||||||||| ||||| Sbjct: 104139 gatctctgaggatgagtacgtcagtgccatcaaggaggaaatcagcaaggttgttaagat 104080 Query: 114 ccaanaanagcttgacattgatgtgct 140 ||| || ||||||||||||||||||| Sbjct: 104079 ccaggaagagcttgacattgatgtgct 104053 Score = 79.8 bits (40), Expect = 4e-12 Identities = 45/47 (95%) Strand = Plus / Minus Query: 1 ttcccacagaccgtggagctcaggagagtccnccgtgagtacaaggc 47 ||||||||||| ||||||||||||||||||| ||||||||||||||| Sbjct: 104272 ttcccacagactgtggagctcaggagagtccgccgtgagtacaaggc 104226 Score = 56.0 bits (28), Expect = 6e-05 Identities = 52/62 (83%) Strand = Plus / Minus Query: 163 aacnatatggntgagtactttggngagcanctctctgnnttcacattcactgccaatgga 222 ||| |||||| |||||||||||| ||||| || |||| || |||| |||||||||||| Sbjct: 103878 aacgatatggttgagtactttggtgagcagctttctggttttgcatttactgccaatgga 103819 Query: 223 tg 224 || Sbjct: 103818 tg 103817
>emb|Z49150.1|CBKPMETGN C.blumei kinetoplast met gene for cobalamine-independent methionine synthase Length = 2795 Score = 91.7 bits (46), Expect = 1e-15 Identities = 111/134 (82%) Strand = Plus / Plus Query: 1 ttcccacagaccgtggagctcaggagagtccnccgtgagtacaaggcaaagaagatctct 60 ||||||||||| ||||| ||||| ||||| | |||||| | |||| ||| | ||||||| Sbjct: 1496 ttcccacagacagtggaactcagaagagtgcgccgtgaattcaagccaacaaggatctct 1555 Query: 61 gaggaggagtacaccaatgccatcaaggaggagatcancaaggttgtcaagatccaanaa 120 ||||||||||| ||| || |||||||||||||||| |||||||||||| | || || Sbjct: 1556 gaggaggagtatgtcaaggctatcaaggaggagatcaacaaggttgtcaaactgcaggaa 1615 Query: 121 nagcttgacattga 134 ||||||||||||| Sbjct: 1616 gagcttgacattga 1629
>ref|NM_121798.2| Arabidopsis thaliana ATCIMS (COBALAMIN-INDEPENDENT METHIONINE SYNTHASE); 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase AT5G17920 (ATCIMS) mRNA, complete cds Length = 2682 Score = 83.8 bits (42), Expect = 3e-13 Identities = 151/191 (79%) Strand = Plus / Plus Query: 1 ttcccacagaccgtggagctcaggagagtccnccgtgagtacaaggcaaagaagatctct 60 ||||||||||| || |||||||||||||| | |||||||||||||| || ||| |||| Sbjct: 1410 ttcccacagactgtagagctcaggagagttcgtcgtgagtacaaggccaaaaaggtctca 1469 Query: 61 gaggaggagtacaccaatgccatcaaggaggagatcancaaggttgtcaagatccaanaa 120 |||||||| ||| || ||||||||||| ||||||| || ||||| | ||||| | Sbjct: 1470 gaggaggactacgttaaagccatcaaggaagagatcaagaaagttgttgacctccaagag 1529 Query: 121 nagcttgacattgatgtgctcnngcacgganagcctganaggaacnatatggntgagtac 180 | |||||||| ||||| || |||||| |||| || || ||| | |||| ||||||| Sbjct: 1530 gaacttgacatcgatgttcttgtccacggagagccagagagaaacgacatggttgagtac 1589 Query: 181 tttggngagca 191 ||||| ||||| Sbjct: 1590 tttggtgagca 1600
>gb|BT012108.1| Arabidopsis thaliana At5g17920 mRNA sequence Length = 2295 Score = 83.8 bits (42), Expect = 3e-13 Identities = 151/191 (79%) Strand = Plus / Plus Query: 1 ttcccacagaccgtggagctcaggagagtccnccgtgagtacaaggcaaagaagatctct 60 ||||||||||| || |||||||||||||| | |||||||||||||| || ||| |||| Sbjct: 1315 ttcccacagactgtagagctcaggagagttcgtcgtgagtacaaggccaaaaaggtctca 1374 Query: 61 gaggaggagtacaccaatgccatcaaggaggagatcancaaggttgtcaagatccaanaa 120 |||||||| ||| || ||||||||||| ||||||| || ||||| | ||||| | Sbjct: 1375 gaggaggactacgttaaagccatcaaggaagagatcaagaaagttgttgacctccaagag 1434 Query: 121 nagcttgacattgatgtgctcnngcacgganagcctganaggaacnatatggntgagtac 180 | |||||||| ||||| || |||||| |||| || || ||| | |||| ||||||| Sbjct: 1435 gaacttgacatcgatgttcttgtccacggagagccagagagaaacgacatggttgagtac 1494 Query: 181 tttggngagca 191 ||||| ||||| Sbjct: 1495 tttggtgagca 1505
>gb|AY091692.1| Arabidopsis thaliana AT5g17920/MPI7_60 mRNA, complete cds Length = 2298 Score = 83.8 bits (42), Expect = 3e-13 Identities = 151/191 (79%) Strand = Plus / Plus Query: 1 ttcccacagaccgtggagctcaggagagtccnccgtgagtacaaggcaaagaagatctct 60 ||||||||||| || |||||||||||||| | |||||||||||||| || ||| |||| Sbjct: 1318 ttcccacagactgtagagctcaggagagttcgtcgtgagtacaaggccaaaaaggtctca 1377 Query: 61 gaggaggagtacaccaatgccatcaaggaggagatcancaaggttgtcaagatccaanaa 120 |||||||| ||| || ||||||||||| ||||||| || ||||| | ||||| | Sbjct: 1378 gaggaggactacgttaaagccatcaaggaagagatcaagaaagttgttgacctccaagag 1437 Query: 121 nagcttgacattgatgtgctcnngcacgganagcctganaggaacnatatggntgagtac 180 | |||||||| ||||| || |||||| |||| || || ||| | |||| ||||||| Sbjct: 1438 gaacttgacatcgatgttcttgtccacggagagccagagagaaacgacatggttgagtac 1497 Query: 181 tttggngagca 191 ||||| ||||| Sbjct: 1498 tttggtgagca 1508
>gb|AY070771.1| Arabidopsis thaliana AT5g17920/MPI7_60 mRNA, complete cds Length = 2648 Score = 83.8 bits (42), Expect = 3e-13 Identities = 151/191 (79%) Strand = Plus / Plus Query: 1 ttcccacagaccgtggagctcaggagagtccnccgtgagtacaaggcaaagaagatctct 60 ||||||||||| || |||||||||||||| | |||||||||||||| || ||| |||| Sbjct: 1400 ttcccacagactgtagagctcaggagagttcgtcgtgagtacaaggccaaaaaggtctca 1459 Query: 61 gaggaggagtacaccaatgccatcaaggaggagatcancaaggttgtcaagatccaanaa 120 |||||||| ||| || ||||||||||| ||||||| || ||||| | ||||| | Sbjct: 1460 gaggaggactacgttaaagccatcaaggaagagatcaagaaagttgttgacctccaagag 1519 Query: 121 nagcttgacattgatgtgctcnngcacgganagcctganaggaacnatatggntgagtac 180 | |||||||| ||||| || |||||| |||| || || ||| | |||| ||||||| Sbjct: 1520 gaacttgacatcgatgttcttgtccacggagagccagagagaaacgacatggttgagtac 1579 Query: 181 tttggngagca 191 ||||| ||||| Sbjct: 1580 tttggtgagca 1590
>gb|AY069876.1| Arabidopsis thaliana AT5g17920/MPI7_60 mRNA, complete cds Length = 2594 Score = 83.8 bits (42), Expect = 3e-13 Identities = 151/191 (79%) Strand = Plus / Plus Query: 1 ttcccacagaccgtggagctcaggagagtccnccgtgagtacaaggcaaagaagatctct 60 ||||||||||| || |||||||||||||| | |||||||||||||| || ||| |||| Sbjct: 1400 ttcccacagactgtagagctcaggagagttcgtcgtgagtacaaggccaaaaaggtctca 1459 Query: 61 gaggaggagtacaccaatgccatcaaggaggagatcancaaggttgtcaagatccaanaa 120 |||||||| ||| || ||||||||||| ||||||| || ||||| | ||||| | Sbjct: 1460 gaggaggactacgttaaagccatcaaggaagagatcaagaaagttgttgacctccaagag 1519 Query: 121 nagcttgacattgatgtgctcnngcacgganagcctganaggaacnatatggntgagtac 180 | |||||||| ||||| || |||||| |||| || || ||| | |||| ||||||| Sbjct: 1520 gaacttgacatcgatgttcttgtccacggagagccagagagaaacgacatggttgagtac 1579 Query: 181 tttggngagca 191 ||||| ||||| Sbjct: 1580 tttggtgagca 1590
>emb|AJ608673.1| Arabidopsis thaliana mRNA for cobalamin-independent methionine synthase (atms1 gene) Length = 2326 Score = 83.8 bits (42), Expect = 3e-13 Identities = 83/97 (85%) Strand = Plus / Plus Query: 1 ttcccacagaccgtggagctcaggagagtccnccgtgagtacaaggcaaagaagatctct 60 ||||||||||| || |||||||||||||| | |||||||||||||| || ||| ||||| Sbjct: 1323 ttcccacagactgtagagctcaggagagttcgtcgtgagtacaaggccaaaaaggtctct 1382 Query: 61 gaggaggagtacaccaatgccatcaaggaggagatca 97 |||||||| ||| || ||||||||||| ||||||| Sbjct: 1383 gaggaggactacgttaaggccatcaaggaagagatca 1419
>gb|AY057499.1| Arabidopsis thaliana AT5g17920/MPI7_60 mRNA, complete cds Length = 2613 Score = 83.8 bits (42), Expect = 3e-13 Identities = 151/191 (79%) Strand = Plus / Plus Query: 1 ttcccacagaccgtggagctcaggagagtccnccgtgagtacaaggcaaagaagatctct 60 ||||||||||| || |||||||||||||| | |||||||||||||| || ||| |||| Sbjct: 1400 ttcccacagactgtagagctcaggagagttcgtcgtgagtacaaggccaaaaaggtctca 1459 Query: 61 gaggaggagtacaccaatgccatcaaggaggagatcancaaggttgtcaagatccaanaa 120 |||||||| ||| || ||||||||||| ||||||| || ||||| | ||||| | Sbjct: 1460 gaggaggactacgttaaagccatcaaggaagagatcaagaaagttgttgacctccaagag 1519 Query: 121 nagcttgacattgatgtgctcnngcacgganagcctganaggaacnatatggntgagtac 180 | |||||||| ||||| || |||||| |||| || || ||| | |||| ||||||| Sbjct: 1520 gaacttgacatcgatgttcttgtccacggagagccagagagaaacgacatggttgagtac 1579 Query: 181 tttggngagca 191 ||||| ||||| Sbjct: 1580 tttggtgagca 1590
>gb|AY057478.1| Arabidopsis thaliana AT5g17920/MPI7_60 mRNA, complete cds Length = 2608 Score = 83.8 bits (42), Expect = 3e-13 Identities = 151/191 (79%) Strand = Plus / Plus Query: 1 ttcccacagaccgtggagctcaggagagtccnccgtgagtacaaggcaaagaagatctct 60 ||||||||||| || |||||||||||||| | |||||||||||||| || ||| |||| Sbjct: 1400 ttcccacagactgtagagctcaggagagttcgtcgtgagtacaaggccaaaaaggtctca 1459 Query: 61 gaggaggagtacaccaatgccatcaaggaggagatcancaaggttgtcaagatccaanaa 120 |||||||| ||| || ||||||||||| ||||||| || ||||| | ||||| | Sbjct: 1460 gaggaggactacgttaaagccatcaaggaagagatcaagaaagttgttgacctccaagag 1519 Query: 121 nagcttgacattgatgtgctcnngcacgganagcctganaggaacnatatggntgagtac 180 | |||||||| ||||| || |||||| |||| || || ||| | |||| ||||||| Sbjct: 1520 gaacttgacatcgatgttcttgtccacggagagccagagagaaacgacatggttgagtac 1579 Query: 181 tttggngagca 191 ||||| ||||| Sbjct: 1580 tttggtgagca 1590
>gb|AY056098.1| Arabidopsis thaliana AT5g17920/MPI7_60 mRNA, complete cds Length = 2460 Score = 83.8 bits (42), Expect = 3e-13 Identities = 151/191 (79%) Strand = Plus / Plus Query: 1 ttcccacagaccgtggagctcaggagagtccnccgtgagtacaaggcaaagaagatctct 60 ||||||||||| || |||||||||||||| | |||||||||||||| || ||| |||| Sbjct: 1400 ttcccacagactgtagagctcaggagagttcgtcgtgagtacaaggccaaaaaggtctca 1459 Query: 61 gaggaggagtacaccaatgccatcaaggaggagatcancaaggttgtcaagatccaanaa 120 |||||||| ||| || ||||||||||| ||||||| || ||||| | ||||| | Sbjct: 1460 gaggaggactacgttaaagccatcaaggaagagatcaagaaagttgttgacctccaagag 1519 Query: 121 nagcttgacattgatgtgctcnngcacgganagcctganaggaacnatatggntgagtac 180 | |||||||| ||||| || |||||| |||| || || ||| | |||| ||||||| Sbjct: 1520 gaacttgacatcgatgttcttgtccacggagagccagagagaaacgacatggttgagtac 1579 Query: 181 tttggngagca 191 ||||| ||||| Sbjct: 1580 tttggtgagca 1590
>dbj|AK222123.1| Arabidopsis thaliana mRNA for 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase, complete cds, clone: RAFL22-94-C14 Length = 1684 Score = 83.8 bits (42), Expect = 3e-13 Identities = 151/191 (79%) Strand = Plus / Plus Query: 1 ttcccacagaccgtggagctcaggagagtccnccgtgagtacaaggcaaagaagatctct 60 ||||||||||| || |||||||||||||| | |||||||||||||| || ||| |||| Sbjct: 428 ttcccacagactgtagagctcaggagagttcgtcgtgagtacaaggccaaaaaggtctca 487 Query: 61 gaggaggagtacaccaatgccatcaaggaggagatcancaaggttgtcaagatccaanaa 120 |||||||| ||| || ||||||||||| ||||||| || ||||| | ||||| | Sbjct: 488 gaggaggactacgttaaagccatcaaggaagagatcaagaaagttgttgacctccaagag 547 Query: 121 nagcttgacattgatgtgctcnngcacgganagcctganaggaacnatatggntgagtac 180 | |||||||| ||||| || |||||| |||| || || ||| | |||| ||||||| Sbjct: 548 gaacttgacatcgatgttcttgtccacggagagccagagagaaacgacatggttgagtac 607 Query: 181 tttggngagca 191 ||||| ||||| Sbjct: 608 tttggtgagca 618
>gb|AY048201.1| Arabidopsis thaliana AT5g17920/MPI7_60 mRNA, complete cds Length = 2549 Score = 83.8 bits (42), Expect = 3e-13 Identities = 151/191 (79%) Strand = Plus / Plus Query: 1 ttcccacagaccgtggagctcaggagagtccnccgtgagtacaaggcaaagaagatctct 60 ||||||||||| || |||||||||||||| | |||||||||||||| || ||| |||| Sbjct: 1400 ttcccacagactgtagagctcaggagagttcgtcgtgagtacaaggccaaaaaggtctca 1459 Query: 61 gaggaggagtacaccaatgccatcaaggaggagatcancaaggttgtcaagatccaanaa 120 |||||||| ||| || ||||||||||| ||||||| || ||||| | ||||| | Sbjct: 1460 gaggaggactacgttaaagccatcaaggaagagatcaagaaagttgttgacctccaagag 1519 Query: 121 nagcttgacattgatgtgctcnngcacgganagcctganaggaacnatatggntgagtac 180 | |||||||| ||||| || |||||| |||| || || ||| | |||| ||||||| Sbjct: 1520 gaacttgacatcgatgttcttgtccacggagagccagagagaaacgacatggttgagtac 1579 Query: 181 tttggngagca 191 ||||| ||||| Sbjct: 1580 tttggtgagca 1590
>gb|AF370522.1|AF370522 Arabidopsis thaliana cobalamin-independent methionine synthase (MPI7.9) mRNA, complete cds Length = 2646 Score = 83.8 bits (42), Expect = 3e-13 Identities = 151/191 (79%) Strand = Plus / Plus Query: 1 ttcccacagaccgtggagctcaggagagtccnccgtgagtacaaggcaaagaagatctct 60 ||||||||||| || |||||||||||||| | |||||||||||||| || ||| |||| Sbjct: 1400 ttcccacagactgtagagctcaggagagttcgtcgtgagtacaaggccaaaaaggtctca 1459 Query: 61 gaggaggagtacaccaatgccatcaaggaggagatcancaaggttgtcaagatccaanaa 120 |||||||| ||| || ||||||||||| ||||||| || ||||| | ||||| | Sbjct: 1460 gaggaggactacgttaaagccatcaaggaagagatcaagaaagttgttgacctccaagag 1519 Query: 121 nagcttgacattgatgtgctcnngcacgganagcctganaggaacnatatggntgagtac 180 | |||||||| ||||| || |||||| |||| || || ||| | |||| ||||||| Sbjct: 1520 gaacttgacatcgatgttcttgtccacggagagccagagagaaacgacatggttgagtac 1579 Query: 181 tttggngagca 191 ||||| ||||| Sbjct: 1580 tttggtgagca 1590
>gb|U97200.1|ATU97200 Arabidopsis thaliana cobalamin-independent methionine synthase (ATCIMS) mRNA, complete cds Length = 2595 Score = 83.8 bits (42), Expect = 3e-13 Identities = 151/191 (79%) Strand = Plus / Plus Query: 1 ttcccacagaccgtggagctcaggagagtccnccgtgagtacaaggcaaagaagatctct 60 ||||||||||| || |||||||||||||| | |||||||||||||| || ||| |||| Sbjct: 1326 ttcccacagactgtagagctcaggagagttcgtcgtgagtacaaggccaaaaaggtctca 1385 Query: 61 gaggaggagtacaccaatgccatcaaggaggagatcancaaggttgtcaagatccaanaa 120 |||||||| ||| || ||||||||||| ||||||| || ||||| | ||||| | Sbjct: 1386 gaggaggactacgttaaagccatcaaggaagagatcaagaaagttgttgacctccaagag 1445 Query: 121 nagcttgacattgatgtgctcnngcacgganagcctganaggaacnatatggntgagtac 180 | |||||||| ||||| || |||||| |||| || || ||| | |||| ||||||| Sbjct: 1446 gaacttgacatcgatgttcttgtccacggagagccagagagaaacgacatggttgagtac 1505 Query: 181 tttggngagca 191 ||||| ||||| Sbjct: 1506 tttggtgagca 1516
>emb|AJ718890.1| Nicotiana tabacum cDNA-AFLP-fragment BSTC14-2-119A, cultivar Bright Yellow 2 Length = 132 Score = 83.8 bits (42), Expect = 3e-13 Identities = 99/121 (81%), Gaps = 1/121 (0%) Strand = Plus / Minus Query: 79 gccatcaaggaggagatcancaaggttgtcaagatccaanaanagcttgacattgatgtg 138 |||||||||||||| |||| ||||||||| | ||||| || |||||||||||||||| Sbjct: 131 gccatcaaggaggaaatcaagaaggttgtcgatctccaagaagagcttgacattgatgt- 73 Query: 139 ctcnngcacgganagcctganaggaacnatatggntgagtactttggngagcanctctct 198 || |||||| | ||||| |||||| |||||| |||||||||||| || || || ||| Sbjct: 72 ctggttcacggagancctgagaggaacgatatggttgagtactttggagancagctatct 13 Query: 199 g 199 | Sbjct: 12 g 12
>emb|AJ718448.1| Nicotiana tabacum cDNA-AFLP-fragment BSTC1-13-195, cultivar Bright Yellow 2 Length = 142 Score = 81.8 bits (41), Expect = 1e-12 Identities = 86/104 (82%) Strand = Plus / Minus Query: 79 gccatcaaggaggagatcancaaggttgtcaagatccaanaanagcttgacattgatgtg 138 |||||||||||||| |||| ||||||||| | ||||| || |||||||||||||||| Sbjct: 141 gccatcaaggaggaaatcaagaaggttgtcgatctccaagaagagcttgacattgatgtc 82 Query: 139 ctcnngcacgganagcctganaggaacnatatggntgagtactt 182 | |||||| ||||||| |||||| |||||| ||||||||| Sbjct: 81 ttggttcacggagagcctgagaggaacgatatggttgagtactt 38
>gb|BT000691.1| Arabidopsis thaliana clone RAFL08-16-E05 (R11047) putative 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (At5g17920) mRNA, complete cds Length = 2585 Score = 75.8 bits (38), Expect = 6e-11 Identities = 150/191 (78%) Strand = Plus / Plus Query: 1 ttcccacagaccgtggagctcaggagagtccnccgtgagtacaaggcaaagaagatctct 60 ||||||| ||| || |||||||||||||| | |||||||||||||| || ||| |||| Sbjct: 1403 ttcccacggactgtagagctcaggagagttcgtcgtgagtacaaggccaaaaaggtctca 1462 Query: 61 gaggaggagtacaccaatgccatcaaggaggagatcancaaggttgtcaagatccaanaa 120 |||||||| ||| || ||||||||||| ||||||| || ||||| | ||||| | Sbjct: 1463 gaggaggactacgttaaagccatcaaggaagagatcaagaaagttgttgacctccaagag 1522 Query: 121 nagcttgacattgatgtgctcnngcacgganagcctganaggaacnatatggntgagtac 180 | |||||||| ||||| || |||||| |||| || || ||| | |||| ||||||| Sbjct: 1523 gaacttgacatcgatgttcttgtccacggagagccagagagaaacgacatggttgagtac 1582 Query: 181 tttggngagca 191 ||||| ||||| Sbjct: 1583 tttggtgagca 1593
>gb|AC009540.6|ATAC009540 Arabidopsis thaliana chromosome III BAC F20H23 genomic sequence, complete sequence Length = 101410 Score = 69.9 bits (35), Expect = 4e-09 Identities = 49/54 (90%) Strand = Plus / Minus Query: 1 ttcccacagaccgtggagctcaggagagtccnccgtgagtacaaggcaaagaag 54 ||||||||||||||||| ||||||||||| | |||||| |||||||| |||||| Sbjct: 57522 ttcccacagaccgtggaactcaggagagttcgccgtgaatacaaggccaagaag 57469 Score = 44.1 bits (22), Expect = 0.22 Identities = 67/83 (80%) Strand = Plus / Minus Query: 55 atctctgaggaggagtacaccaatgccatcaaggaggagatcancaaggttgtcaagatc 114 |||||||| ||||| ||| ||| ||||||||||| ||||||| || ||||| | ||| Sbjct: 57375 atctctgaagaggattacgtcaaggccatcaaggaagagatcaagaaagttgttgacatc 57316 Query: 115 caanaanagcttgacattgatgt 137 ||| | | |||||||||||||| Sbjct: 57315 caagaggaccttgacattgatgt 57293
>dbj|AB011480.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MPI7 Length = 40548 Score = 56.0 bits (28), Expect = 6e-05 Identities = 42/47 (89%) Strand = Plus / Plus Query: 1 ttcccacagaccgtggagctcaggagagtccnccgtgagtacaaggc 47 ||||||||||| || |||||||||||||| | |||||||||||||| Sbjct: 38396 ttcccacagactgtagagctcaggagagttcgtcgtgagtacaaggc 38442
>ref|XM_385242.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG05066.1) partial mRNA Length = 2910 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 ggaggagtacaccaatgcca 82 |||||||||||||||||||| Sbjct: 391 ggaggagtacaccaatgcca 372
>emb|AL356601.14| Human DNA sequence from clone RP11-486D20 on chromosome 6, complete sequence Length = 91172 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 aaggcaaagaagatctctga 62 |||||||||||||||||||| Sbjct: 13940 aaggcaaagaagatctctga 13959
>emb|AL138765.18| Human DNA sequence from clone RP11-34E5 on chromosome 10 Contains the SMBP gene for SM-11044 binding protein (SMBP)(EP70-P-iso), the TLL2 gene for tolloid-like 2, a nucleophosmin (nucleolar phosphoprotein B23, numatrin) (NPM1)(B23, NPM, NUMATRIN) pseudogene, a ribosomal protein S2 (RPS2)(LLREP3) pseudogene, the 3' end of the gene for a novel protein (possible ortholog of mouse phosphoinositide-3-kinase adaptor protein 1 (Pik3ap1)) and two CpG islands, complete sequence Length = 162820 Score = 40.1 bits (20), Expect = 3.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 1 ttcccacagaccgtggagctcagg 24 ||||||||||| |||||||||||| Sbjct: 91298 ttcccacagactgtggagctcagg 91275
>emb|BX831470.1|CNS0A1W8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS94ZC02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1156 Score = 40.1 bits (20), Expect = 3.5 Identities = 39/47 (82%) Strand = Plus / Plus Query: 145 cacgganagcctganaggaacnatatggntgagtactttggngagca 191 |||||| |||| || || ||| | |||| |||||||||||| ||||| Sbjct: 92 cacggagagccagagagaaacgacatggttgagtactttggtgagca 138
>gb|AC114588.9| Mus musculus chromosome 1, clone RP23-363M8, complete sequence Length = 167497 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 aggcaaagaagatctctgag 63 |||||||||||||||||||| Sbjct: 141523 aggcaaagaagatctctgag 141504 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,221,490 Number of Sequences: 3902068 Number of extensions: 1221490 Number of successful extensions: 20122 Number of sequences better than 10.0: 56 Number of HSP's better than 10.0 without gapping: 56 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 20012 Number of HSP's gapped (non-prelim): 104 length of query: 270 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 248 effective length of database: 17,147,199,772 effective search space: 4252505543456 effective search space used: 4252505543456 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)