>LRP2_HUMAN (P98164) Low-density lipoprotein receptor-related protein 2 precursor|
            (Megalin) (Glycoprotein 330) (gp330)
          Length = 4655

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 17/56 (30%), Positives = 25/56 (44%)
 Frame = -1

Query: 489  WPFCLWVGPCDSGVPPSQQQRIQPRTMNLLGSDPKVQQVLSCPIRWSCESHYTCGD 322
            W  C  V  C      S +Q  + RT + +G D + +     P+RW C+    CGD
Sbjct: 3696 WAVCNGVDDCRDN---SDEQGCEERTCHPVG-DFRCKNHHCIPLRWQCDGQNDCGD 3747

>HEM1_BACSK (Q5WEP3) Glutamyl-tRNA reductase (EC 1.2.1.70) (GluTR)|
          Length = 454

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
 Frame = +3

Query: 297 GNMARVVEGHRRYSGFRKTILLDRTK--LVELLDHFQGGSLSWVEFSAAVKEA 449
           G M+ +   H   +G     +++RTK   VEL   F G + S+ E + A+KEA
Sbjct: 191 GKMSELTAKHLYANGAASISVMNRTKENAVELASQFAGTARSFAELNDALKEA 243

>PDZK3_RAT (Q9QZR8) PDZ domain-containing protein 3 (PDZ domain-containing|
            protein 2) (Plakophilin-related armadillo repeat
            protein-interacting PDZ protein)
          Length = 2766

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
 Frame = +3

Query: 165  PNLVRKEKLLSPDELRPFQNHSTQMAALDYMVSIASNVFIP------SYDGNMARVVEGH 326
            P+L +K+ LLS  EL  +  H  Q +  D++V+ + +   P      S DG++  V   H
Sbjct: 802  PSLAKKDSLLSESELSQYFVHDGQGSLSDFVVAGSEDEDHPGSGYETSEDGSLLPVPSAH 861

Query: 327  RRYSGFRKTILLDRT 371
            +  +    T+   RT
Sbjct: 862  KARANSLVTLGSQRT 876

>UTP15_CHICK (Q5F3D7) U3 small nucleolar RNA-associated protein 15 homolog|
          Length = 520

 Score = 29.6 bits (65), Expect = 7.8
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
 Frame = +3

Query: 441 KEAHQNRMGQPTDRRAIPGR---PKEEDYFYSNPQECL 545
           KE  Q +  QP  R  + GR   PK+ED+F S P  C+
Sbjct: 324 KEKSQKKR-QPAYRTYVKGRNYMPKQEDFFVSKPGRCI 360

>CCHL_YEAST (P06182) Cytochrome c heme lyase (EC 4.4.1.17) (CCHL)|
           (Holocytochrome-C synthase)
          Length = 269

 Score = 29.6 bits (65), Expect = 7.8
 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
 Frame = -1

Query: 447 PPSQQQRIQPRTMNLLGSDPKVQQVLSCPIRWSCESHYTCGDL-----QQPLPYSRHNW 286
           P + +  +QP+ +  +G       VLS   RW     + CG L      Q LP+ RH+W
Sbjct: 145 PHTDESHVQPKLLKFMGKPG----VLSPRARWM----HLCGLLFPSHFSQELPFDRHDW 195

>WDR47_MOUSE (Q8CGF6) WD-repeat protein 47|
          Length = 920

 Score = 29.6 bits (65), Expect = 7.8
 Identities = 18/75 (24%), Positives = 34/75 (45%)
 Frame = -1

Query: 402 LGSDPKVQQVLSCPIRWSCESHYTCGDLQQPLPYSRHNWG*KHCLLSKPCSPVLPSGSNG 223
           +GS+ K  +V + P +    +H            ++H+ G  +C+   PC  +L +GSN 
Sbjct: 624 VGSNSKTLRVCAYPEKMDASAHDNPKQPVVRFKRNKHHKGSIYCVAWSPCGQLLATGSN- 682

Query: 222 SGMAAIHREIEVFPF 178
                  + ++V PF
Sbjct: 683 ------DKYVKVLPF 691


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,942,599
Number of Sequences: 219361
Number of extensions: 2465476
Number of successful extensions: 5851
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5581
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5851
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5881538857
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)