ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags4c03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_550261.1| Oryza sativa (japonica cultivar-group), mRNA 456 e-125
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 252 1e-63
3dbj|AP003339.4| Oryza sativa (japonica cultivar-group) genomic D... 252 1e-63
4dbj|AP002912.2| Oryza sativa (japonica cultivar-group) genomic D... 252 1e-63
5dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
6dbj|AP005759.3| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
7ref|NM_187536.1| Oryza sativa (japonica cultivar-group), predic... 60 9e-06
8gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 60 9e-06
9dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 60 9e-06
10gb|AC137547.2| Oryza sativa (japonica cultivar-group) chromosome... 60 9e-06
11dbj|AK107122.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 9e-06
12gb|AC126222.2| Oryza sativa (japonica cultivar-group) chromosome... 60 9e-06
13dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 58 4e-05
14dbj|AP004791.3| Oryza sativa (japonica cultivar-group) genomic D... 58 4e-05
15dbj|AK070550.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 4e-05
16dbj|AK068496.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 4e-05
17dbj|AK073003.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
18emb|AL391144.1|ATF14F8 Arabidopsis thaliana DNA chromosome 5, BA... 52 0.002
19gb|AC130529.2| Mus musculus BAC clone RP23-124O11 from chromosom... 50 0.009
20gb|AC140206.2| Mus musculus BAC clone RP24-446O8 from chromosome... 50 0.009
21gb|AC073556.11| Oryza sativa chromosome 3 BAC OSJNBa0091P11 geno... 50 0.009
22ref|NM_121579.3| Arabidopsis thaliana unknown protein AT5G15740 ... 48 0.035
23dbj|AK220896.1| Arabidopsis thaliana mRNA for hypothetical prote... 48 0.035
24gb|BT023458.1| Arabidopsis thaliana At5g15740 gene, complete cds 48 0.035
25emb|BX832033.1|CNS0A1Q0 Arabidopsis thaliana Full-length cDNA Co... 48 0.035
26ref|XM_470295.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.14
27gb|AC139100.3| Homo sapiens chromosome 18, clone, complete sequence 46 0.14
28gb|AC127503.3| Homo sapiens chromosome 18, clone RP11-245M2, com... 46 0.14
29gb|AC068530.16| Homo sapiens chromosome 18, clone RP11-565D23, c... 46 0.14
30dbj|AK064675.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.14
31gb|AC144702.2| Danio rerio clone CH211-138D14, complete sequence 44 0.55
32gb|AC112508.2| Homo sapiens 3 BAC RP11-347G18 (Roswell Park Canc... 44 0.55
33emb|BX323995.13| Zebrafish DNA sequence from clone RP71-86K19 in... 44 0.55
34emb|BX537262.7| Zebrafish DNA sequence from clone DKEY-111N6 in ... 44 0.55
35ref|NM_174241.2| Bos taurus annexin A8 (ANXA8), mRNA 42 2.2
36gb|AC182667.2| Populus trichocarpa clone Pop1-18L12, complete se... 42 2.2
37gb|BC113321.1| Bos taurus annexin A8, mRNA (cDNA clone MGC:13776... 42 2.2
38gb|AF417637.1|AF417637 Bos taurus annexin VIII mRNA, complete cds 42 2.2
39dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
40dbj|AP005647.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
41gb|BT021646.1| Bos taurus annexin A8 (ANXA8), mRNA, complete cds 42 2.2
42gb|BT021645.1| Bos taurus annexin A8 (ANXA8), mRNA, complete cds 42 2.2
43emb|X80301.1|NTAXI1G N.tabacum axi 1 gene 42 2.2
44gb|L22247.1|NEMSNUB Ascaris lumbricoides small nuclear RNA (snRN... 42 2.2
45gb|L03208.1|TOBAIGA Nicotiana tabacum mRNA sequence 42 2.2
46ref|XM_467575.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.6
47ref|XM_420851.1| PREDICTED: Gallus gallus similar to RNA polymer... 40 8.6
48gb|AC113028.15| Mus musculus chromosome 5, clone RP23-205D3, com... 40 8.6
49gb|AC163687.5| Mus musculus BAC clone RP23-3H13 from chromosome ... 40 8.6
50gb|AC119906.6| Mus musculus chromosome 5, clone RP24-239D13, com... 40 8.6
51gb|AF467442.1| Homo sapiens Smith-Magenis syndrome chromosome re... 40 8.6
52gb|AC122336.4| Mus musculus BAC clone RP23-351K21 from chromosom... 40 8.6
53gb|AC018545.14| Homo sapiens 3 BAC RP11-145F16 (Roswell Park Can... 40 8.6
54gb|AC095402.7| Rattus norvegicus 2 BAC CH230-7A22 (Children's Ho... 40 8.6
55emb|AL022344.3|HSY214H10 Human DNA sequence from clone XX-Y214H1... 40 8.6
56emb|BX005225.20| Zebrafish DNA sequence from clone DKEY-34L15 in... 40 8.6
57gb|AC023933.9| Homo sapiens chromosome 8, clone RP11-553F15, com... 40 8.6
58gb|AC026827.6| Homo sapiens chromosome 8, clone RP11-678C14, com... 40 8.6
59gb|AC005713.8|AC005713 Drosophila melanogaster, chromosome 2R, r... 40 8.6
60gb|AC012075.10| Homo sapiens BAC clone RP11-492P1 from 2, comple... 40 8.6
61dbj|BA000013.4| Mesorhizobium loti MAFF303099 pMLa DNA, cpmplete... 40 8.6
62gb|AC122129.9| Homo sapiens chromosome 17, clone RP1-253P7, comp... 40 8.6
63dbj|AP005284.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
64gb|AC154288.2| Mus musculus BAC clone RP23-447G10 from 17, compl... 40 8.6
65gb|AC153792.4| Mus musculus BAC clone RP23-435D23 from 7, comple... 40 8.6
66gb|AE003803.4| Drosophila melanogaster chromosome 2R, section 47... 40 8.6
67dbj|AP005625.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 8.6
68emb|AL354000.7|HS253P07 Homo from PAC RP1-253P07 and PAC RP1-28... 40 8.6
69emb|CT009575.8| Mouse DNA sequence from clone RP23-107N17 on chr... 40 8.6
70dbj|AB036794.1| Drosophila melanogaster genomic DNA, chromosome ... 40 8.6 
>ref|XM_550261.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1473

 Score =  456 bits (230), Expect = e-125
 Identities = 404/462 (87%)
 Strand = Plus / Plus

                                                                        
Query: 22   ttcagggactttgccctctcacacctgaggaaattgctctagtgcttaaagctctaggat 81
            ||||||||||||| || || ||||| ||||||||| |||| |||||||||||||||||||
Sbjct: 905  ttcagggactttgtccccttacacccgaggaaattactctggtgcttaaagctctaggat 964

                                                                        
Query: 82   tttctaaggatacgttgatatatattgcctctggtgaaatctatggaggtgaaagacggt 141
            ||   ||||||||  |||| ||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 965  ttaaaaaggatacactgatttatatagcctctggtgaaatctatggaggtgaaaggcggt 1024

                                                                        
Query: 142  tggctgctctgagggccgcctatcctaatttggtaagaaaggaaaaacttctatctcccg 201
            |||| ||| ||| ||| || |||||||  |||||| | ||||| |||||| ||||||| |
Sbjct: 1025 tggcagctttgaaggctgcatatcctagattggtacggaaggagaaacttttatctcctg 1084

                                                                        
Query: 202  atgaattgcggccattccagaaccattcgacccagatggcagcactggactacatggttt 261
            | ||||||| ||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 1085 aggaattgcagccattccagaaccactcaacccagatggcagcactggactacatggttt 1144

                                                                        
Query: 262  cgatagcaagcaatgttttcatccccagttatgacgggaatatggcaagggttgttgaag 321
            | ||||||||| |||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 1145 caatagcaagcgatgttttcatccccagttatgatggaaatatggcaagggttgttgaag 1204

                                                                        
Query: 322  gtcaccgcaggtatagtggctttcgcaagaccatcttattggacaggacaaaacttgttg 381
            | || ||||| || |  ||||| |||||||||||| |||||||||||   ||||||||||
Sbjct: 1205 gccatcgcagatacacgggcttccgcaagaccatcctattggacagggtgaaacttgttg 1264

                                                                        
Query: 382  aacttttggatcacttccaaggaggttcattgtcctgggttgaattctctgctgctgtga 441
            |||||||||||   |||||||||||| || ||||||||  ||||||||||||||||||||
Sbjct: 1265 aacttttggatagtttccaaggaggtgcaatgtcctggaatgaattctctgctgctgtga 1324

                                                      
Query: 442  aggaggcacaccagaatcgcatgggccaacccacagacagaa 483
            || ||||||||||| |||||||||| || || ||||| ||||
Sbjct: 1325 agaaggcacaccagcatcgcatgggtcagccgacagaaagaa 1366
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  252 bits (127), Expect = 1e-63
 Identities = 205/231 (88%)
 Strand = Plus / Plus

                                                                           
Query: 339     ggctttcgcaagaccatcttattggacaggacaaaacttgttgaacttttggatcacttc 398
               ||||| |||||||||||| |||||||||||   |||||||||||||||||||||   |||
Sbjct: 3514098 ggcttccgcaagaccatcctattggacagggtgaaacttgttgaacttttggatagtttc 3514157

                                                                           
Query: 399     caaggaggttcattgtcctgggttgaattctctgctgctgtgaaggaggcacaccagaat 458
               ||||||||| || ||||||||  |||||||||||||||||||||| ||||||||||| ||
Sbjct: 3514158 caaggaggtgcaatgtcctggaatgaattctctgctgctgtgaagaaggcacaccagcat 3514217

                                                                           
Query: 459     cgcatgggccaacccacagacagaagggccatacctggccggcccaaggaagaggactat 518
               |||||||| || || ||||| |||| || ||| |||||||||||||||||||||||||||
Sbjct: 3514218 cgcatgggtcagccgacagaaagaaaggtcatccctggccggcccaaggaagaggactat 3514277

                                                                  
Query: 519     ttctattctaatccccaagaatgccttggttcgatggggagattaagagat 569
               |||||| ||||||||||||||||||||||||| | || | |||||||||||
Sbjct: 3514278 ttctatgctaatccccaagaatgccttggttcaagggagggattaagagat 3514328



 Score =  202 bits (102), Expect = 1e-48
 Identities = 141/154 (91%)
 Strand = Plus / Plus

                                                                           
Query: 180     aaggaaaaacttctatctcccgatgaattgcggccattccagaaccattcgacccagatg 239
               ||||| |||||| ||||||| || ||||||| ||||||||||||||| || |||||||||
Sbjct: 3513524 aaggagaaacttttatctcctgaggaattgcagccattccagaaccactcaacccagatg 3513583

                                                                           
Query: 240     gcagcactggactacatggtttcgatagcaagcaatgttttcatccccagttatgacggg 299
               ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| || 
Sbjct: 3513584 gcagcactggactacatggtttcaatagcaagcgatgttttcatccccagttatgatgga 3513643

                                                 
Query: 300     aatatggcaagggttgttgaaggtcaccgcaggt 333
               ||||||||||||||||||||||| || |||||||
Sbjct: 3513644 aatatggcaagggttgttgaaggccatcgcaggt 3513677



 Score =  141 bits (71), Expect = 3e-30
 Identities = 128/147 (87%)
 Strand = Plus / Plus

                                                                           
Query: 22      ttcagggactttgccctctcacacctgaggaaattgctctagtgcttaaagctctaggat 81
               ||||||||||||| || || ||||| ||||||||| |||| |||||||||||||||||||
Sbjct: 3513284 ttcagggactttgtccccttacacccgaggaaattactctggtgcttaaagctctaggat 3513343

                                                                           
Query: 82      tttctaaggatacgttgatatatattgcctctggtgaaatctatggaggtgaaagacggt 141
               ||   ||||||||  |||| ||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 3513344 ttaaaaaggatacactgatttatatagcctctggtgaaatctatggaggtgaaaggcggt 3513403

                                          
Query: 142     tggctgctctgagggccgcctatccta 168
               |||| ||| ||| ||| || |||||||
Sbjct: 3513404 tggcagctttgaaggctgcatatccta 3513430
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>dbj|AP003339.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1276_B06
          Length = 175174

 Score =  252 bits (127), Expect = 1e-63
 Identities = 205/231 (88%)
 Strand = Plus / Plus

                                                                         
Query: 339   ggctttcgcaagaccatcttattggacaggacaaaacttgttgaacttttggatcacttc 398
             ||||| |||||||||||| |||||||||||   |||||||||||||||||||||   |||
Sbjct: 82166 ggcttccgcaagaccatcctattggacagggtgaaacttgttgaacttttggatagtttc 82225

                                                                         
Query: 399   caaggaggttcattgtcctgggttgaattctctgctgctgtgaaggaggcacaccagaat 458
             ||||||||| || ||||||||  |||||||||||||||||||||| ||||||||||| ||
Sbjct: 82226 caaggaggtgcaatgtcctggaatgaattctctgctgctgtgaagaaggcacaccagcat 82285

                                                                         
Query: 459   cgcatgggccaacccacagacagaagggccatacctggccggcccaaggaagaggactat 518
             |||||||| || || ||||| |||| || ||| |||||||||||||||||||||||||||
Sbjct: 82286 cgcatgggtcagccgacagaaagaaaggtcatccctggccggcccaaggaagaggactat 82345

                                                                
Query: 519   ttctattctaatccccaagaatgccttggttcgatggggagattaagagat 569
             |||||| ||||||||||||||||||||||||| | || | |||||||||||
Sbjct: 82346 ttctatgctaatccccaagaatgccttggttcaagggagggattaagagat 82396



 Score =  202 bits (102), Expect = 1e-48
 Identities = 141/154 (91%)
 Strand = Plus / Plus

                                                                         
Query: 180   aaggaaaaacttctatctcccgatgaattgcggccattccagaaccattcgacccagatg 239
             ||||| |||||| ||||||| || ||||||| ||||||||||||||| || |||||||||
Sbjct: 81592 aaggagaaacttttatctcctgaggaattgcagccattccagaaccactcaacccagatg 81651

                                                                         
Query: 240   gcagcactggactacatggtttcgatagcaagcaatgttttcatccccagttatgacggg 299
             ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| || 
Sbjct: 81652 gcagcactggactacatggtttcaatagcaagcgatgttttcatccccagttatgatgga 81711

                                               
Query: 300   aatatggcaagggttgttgaaggtcaccgcaggt 333
             ||||||||||||||||||||||| || |||||||
Sbjct: 81712 aatatggcaagggttgttgaaggccatcgcaggt 81745



 Score =  141 bits (71), Expect = 3e-30
 Identities = 128/147 (87%)
 Strand = Plus / Plus

                                                                         
Query: 22    ttcagggactttgccctctcacacctgaggaaattgctctagtgcttaaagctctaggat 81
             ||||||||||||| || || ||||| ||||||||| |||| |||||||||||||||||||
Sbjct: 81352 ttcagggactttgtccccttacacccgaggaaattactctggtgcttaaagctctaggat 81411

                                                                         
Query: 82    tttctaaggatacgttgatatatattgcctctggtgaaatctatggaggtgaaagacggt 141
             ||   ||||||||  |||| ||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 81412 ttaaaaaggatacactgatttatatagcctctggtgaaatctatggaggtgaaaggcggt 81471

                                        
Query: 142   tggctgctctgagggccgcctatccta 168
             |||| ||| ||| ||| || |||||||
Sbjct: 81472 tggcagctttgaaggctgcatatccta 81498
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>dbj|AP002912.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0028E10
          Length = 140791

 Score =  252 bits (127), Expect = 1e-63
 Identities = 205/231 (88%)
 Strand = Plus / Plus

                                                                          
Query: 339    ggctttcgcaagaccatcttattggacaggacaaaacttgttgaacttttggatcacttc 398
              ||||| |||||||||||| |||||||||||   |||||||||||||||||||||   |||
Sbjct: 100858 ggcttccgcaagaccatcctattggacagggtgaaacttgttgaacttttggatagtttc 100917

                                                                          
Query: 399    caaggaggttcattgtcctgggttgaattctctgctgctgtgaaggaggcacaccagaat 458
              ||||||||| || ||||||||  |||||||||||||||||||||| ||||||||||| ||
Sbjct: 100918 caaggaggtgcaatgtcctggaatgaattctctgctgctgtgaagaaggcacaccagcat 100977

                                                                          
Query: 459    cgcatgggccaacccacagacagaagggccatacctggccggcccaaggaagaggactat 518
              |||||||| || || ||||| |||| || ||| |||||||||||||||||||||||||||
Sbjct: 100978 cgcatgggtcagccgacagaaagaaaggtcatccctggccggcccaaggaagaggactat 101037

                                                                 
Query: 519    ttctattctaatccccaagaatgccttggttcgatggggagattaagagat 569
              |||||| ||||||||||||||||||||||||| | || | |||||||||||
Sbjct: 101038 ttctatgctaatccccaagaatgccttggttcaagggagggattaagagat 101088



 Score =  202 bits (102), Expect = 1e-48
 Identities = 141/154 (91%)
 Strand = Plus / Plus

                                                                          
Query: 180    aaggaaaaacttctatctcccgatgaattgcggccattccagaaccattcgacccagatg 239
              ||||| |||||| ||||||| || ||||||| ||||||||||||||| || |||||||||
Sbjct: 100284 aaggagaaacttttatctcctgaggaattgcagccattccagaaccactcaacccagatg 100343

                                                                          
Query: 240    gcagcactggactacatggtttcgatagcaagcaatgttttcatccccagttatgacggg 299
              ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| || 
Sbjct: 100344 gcagcactggactacatggtttcaatagcaagcgatgttttcatccccagttatgatgga 100403

                                                
Query: 300    aatatggcaagggttgttgaaggtcaccgcaggt 333
              ||||||||||||||||||||||| || |||||||
Sbjct: 100404 aatatggcaagggttgttgaaggccatcgcaggt 100437



 Score =  141 bits (71), Expect = 3e-30
 Identities = 128/147 (87%)
 Strand = Plus / Plus

                                                                          
Query: 22     ttcagggactttgccctctcacacctgaggaaattgctctagtgcttaaagctctaggat 81
              ||||||||||||| || || ||||| ||||||||| |||| |||||||||||||||||||
Sbjct: 100044 ttcagggactttgtccccttacacccgaggaaattactctggtgcttaaagctctaggat 100103

                                                                          
Query: 82     tttctaaggatacgttgatatatattgcctctggtgaaatctatggaggtgaaagacggt 141
              ||   ||||||||  |||| ||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 100104 ttaaaaaggatacactgatttatatagcctctggtgaaatctatggaggtgaaaggcggt 100163

                                         
Query: 142    tggctgctctgagggccgcctatccta 168
              |||| ||| ||| ||| || |||||||
Sbjct: 100164 tggcagctttgaaggctgcatatccta 100190
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 97/119 (81%)
 Strand = Plus / Minus

                                                                            
Query: 216      ttccagaaccattcgacccagatggcagcactggactacatggtttcgatagcaagcaat 275
                ||||||||||||||  |||||||||||||| | || ||||| || ||  | |  ||  ||
Sbjct: 18164115 ttccagaaccattcctcccagatggcagcattagattacattgtatccttggagagtgat 18164056

                                                                           
Query: 276      gttttcatccccagttatgacgggaatatggcaagggttgttgaaggtcaccgcaggta 334
                 |||| ||||||| |||||| || ||||||||||  |||||||||||||| ||||||||
Sbjct: 18164055 atttttatccccacttatgatggtaatatggcaaaagttgttgaaggtcatcgcaggta 18163997
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>dbj|AP005759.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0556A05
          Length = 158189

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 97/119 (81%)
 Strand = Plus / Minus

                                                                         
Query: 216   ttccagaaccattcgacccagatggcagcactggactacatggtttcgatagcaagcaat 275
             ||||||||||||||  |||||||||||||| | || ||||| || ||  | |  ||  ||
Sbjct: 12839 ttccagaaccattcctcccagatggcagcattagattacattgtatccttggagagtgat 12780

                                                                        
Query: 276   gttttcatccccagttatgacgggaatatggcaagggttgttgaaggtcaccgcaggta 334
              |||| ||||||| |||||| || ||||||||||  |||||||||||||| ||||||||
Sbjct: 12779 atttttatccccacttatgatggtaatatggcaaaagttgttgaaggtcatcgcaggta 12721
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>ref|NM_187536.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1497

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                  
Query: 98   gatatatattgcctctggtgaaatctatggaggtgaaa 135
            ||||||||||||||| |||||||||||||| |||||||
Sbjct: 1002 gatatatattgcctcgggtgaaatctatggtggtgaaa 1039



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                        
Query: 504  aaggaagaggactatttctattctaatccccaagaatgccttgg 547
            |||||||||||||| |||||| ||||||| || ||||| |||||
Sbjct: 1408 aaggaagaggactacttctatgctaatccacatgaatgtcttgg 1451



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                               
Query: 412  tgtcctgggttgaattctctgctgctgtgaaggag 446
            |||||||||  ||||||||| ||||||||||||||
Sbjct: 1316 tgtcctgggacgaattctctactgctgtgaaggag 1350
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                      
Query: 98       gatatatattgcctctggtgaaatctatggaggtgaaa 135
                ||||||||||||||| |||||||||||||| |||||||
Sbjct: 11982813 gatatatattgcctcgggtgaaatctatggtggtgaaa 11982776



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 97/121 (80%)
 Strand = Plus / Minus

                                                                           
Query: 215     attccagaaccattcgacccagatggcagcactggactacatggtttcgatagcaagcaa 274
               |||||||||||||||  | |||||||| ||||| |||| ||| || || | ||| ||  |
Sbjct: 3699894 attccagaaccattcttctcagatggctgcacttgacttcattgtatccacagccagtga 3699835

                                                                           
Query: 275     tgttttcatccccagttatgacgggaatatggcaagggttgttgaaggtcaccgcaggta 334
               | ||||||| || | |||||| || || |||||||   |||||||||||||||| |||||
Sbjct: 3699834 tattttcattcctacttatgatggtaacatggcaaaacttgttgaaggtcaccggaggta 3699775

                
Query: 335     t 335
               |
Sbjct: 3699774 t 3699774



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                            
Query: 504      aaggaagaggactatttctattctaatccccaagaatgccttgg 547
                |||||||||||||| |||||| ||||||| || ||||| |||||
Sbjct: 11982051 aaggaagaggactacttctatgctaatccacatgaatgtcttgg 11982008



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                   
Query: 412      tgtcctgggttgaattctctgctgctgtgaaggag 446
                |||||||||  ||||||||| ||||||||||||||
Sbjct: 11982143 tgtcctgggacgaattctctactgctgtgaaggag 11982109
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                      
Query: 98       gatatatattgcctctggtgaaatctatggaggtgaaa 135
                ||||||||||||||| |||||||||||||| |||||||
Sbjct: 11979576 gatatatattgcctcgggtgaaatctatggtggtgaaa 11979539



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 97/121 (80%)
 Strand = Plus / Minus

                                                                           
Query: 215     attccagaaccattcgacccagatggcagcactggactacatggtttcgatagcaagcaa 274
               |||||||||||||||  | |||||||| ||||| |||| ||| || || | ||| ||  |
Sbjct: 3700005 attccagaaccattcttctcagatggctgcacttgacttcattgtatccacagccagtga 3699946

                                                                           
Query: 275     tgttttcatccccagttatgacgggaatatggcaagggttgttgaaggtcaccgcaggta 334
               | ||||||| || | |||||| || || |||||||   |||||||||||||||| |||||
Sbjct: 3699945 tattttcattcctacttatgatggtaacatggcaaaacttgttgaaggtcaccggaggta 3699886

                
Query: 335     t 335
               |
Sbjct: 3699885 t 3699885



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                            
Query: 504      aaggaagaggactatttctattctaatccccaagaatgccttgg 547
                |||||||||||||| |||||| ||||||| || ||||| |||||
Sbjct: 11978814 aaggaagaggactacttctatgctaatccacatgaatgtcttgg 11978771



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                   
Query: 412      tgtcctgggttgaattctctgctgctgtgaaggag 446
                |||||||||  ||||||||| ||||||||||||||
Sbjct: 11978906 tgtcctgggacgaattctctactgctgtgaaggag 11978872
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>gb|AC137547.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
            OSJNBa0052J20, complete sequence
          Length = 144969

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                  
Query: 98   gatatatattgcctctggtgaaatctatggaggtgaaa 135
            ||||||||||||||| |||||||||||||| |||||||
Sbjct: 3393 gatatatattgcctcgggtgaaatctatggtggtgaaa 3356



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                        
Query: 504  aaggaagaggactatttctattctaatccccaagaatgccttgg 547
            |||||||||||||| |||||| ||||||| || ||||| |||||
Sbjct: 2631 aaggaagaggactacttctatgctaatccacatgaatgtcttgg 2588



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 412  tgtcctgggttgaattctctgctgctgtgaaggag 446
            |||||||||  ||||||||| ||||||||||||||
Sbjct: 2723 tgtcctgggacgaattctctactgctgtgaaggag 2689
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>dbj|AK107122.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-B06, full
            insert sequence
          Length = 1947

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                  
Query: 98   gatatatattgcctctggtgaaatctatggaggtgaaa 135
            ||||||||||||||| |||||||||||||| |||||||
Sbjct: 1042 gatatatattgcctcgggtgaaatctatggtggtgaaa 1079



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                        
Query: 504  aaggaagaggactatttctattctaatccccaagaatgccttgg 547
            |||||||||||||| |||||| ||||||| || ||||| |||||
Sbjct: 1448 aaggaagaggactacttctatgctaatccacatgaatgtcttgg 1491



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                               
Query: 412  tgtcctgggttgaattctctgctgctgtgaaggag 446
            |||||||||  ||||||||| ||||||||||||||
Sbjct: 1356 tgtcctgggacgaattctctactgctgtgaaggag 1390
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>gb|AC126222.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0014I10, complete sequence
          Length = 113946

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                   
Query: 98    gatatatattgcctctggtgaaatctatggaggtgaaa 135
             ||||||||||||||| |||||||||||||| |||||||
Sbjct: 84075 gatatatattgcctcgggtgaaatctatggtggtgaaa 84038



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                         
Query: 504   aaggaagaggactatttctattctaatccccaagaatgccttgg 547
             |||||||||||||| |||||| ||||||| || ||||| |||||
Sbjct: 83313 aaggaagaggactacttctatgctaatccacatgaatgtcttgg 83270



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 412   tgtcctgggttgaattctctgctgctgtgaaggag 446
             |||||||||  ||||||||| ||||||||||||||
Sbjct: 83405 tgtcctgggacgaattctctactgctgtgaaggag 83371
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                         
Query: 504      aaggaagaggactatttctattctaatccccaagaatgcct 544
                ||||||||||||||||| ||| | |||||||||||||||||
Sbjct: 10094215 aaggaagaggactatttttatgccaatccccaagaatgcct 10094175
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>dbj|AP004791.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0491D10
          Length = 162039

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                      
Query: 504   aaggaagaggactatttctattctaatccccaagaatgcct 544
             ||||||||||||||||| ||| | |||||||||||||||||
Sbjct: 60581 aaggaagaggactatttttatgccaatccccaagaatgcct 60541
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>dbj|AK070550.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061C04, full
            insert sequence
          Length = 3073

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                     
Query: 504  aaggaagaggactatttctattctaatccccaagaatgcct 544
            ||||||||||||||||| ||| | |||||||||||||||||
Sbjct: 1877 aaggaagaggactatttttatgccaatccccaagaatgcct 1917
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>dbj|AK068496.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155M21, full
            insert sequence
          Length = 2423

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                     
Query: 504  aaggaagaggactatttctattctaatccccaagaatgcct 544
            ||||||||||||||||| ||| | |||||||||||||||||
Sbjct: 1877 aaggaagaggactatttttatgccaatccccaagaatgcct 1917
to top
>dbj|AK073003.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150K23, full
            insert sequence
          Length = 2335

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 94/116 (81%)
 Strand = Plus / Plus

                                                                        
Query: 216  ttccagaaccattcgacccagatggcagcactggactacatggtttcgatagcaagcaat 275
            ||||||||||||||  |||||||||||||| | || ||||| || ||  | |  ||  ||
Sbjct: 1590 ttccagaaccattcctcccagatggcagcattagattacattgtatccttggagagtgat 1649

                                                                    
Query: 276  gttttcatccccagttatgacgggaatatggcaagggttgttgaaggtcaccgcag 331
             |||| ||||||| |||||| || ||||||||||  |||||||||||||| |||||
Sbjct: 1650 atttttatccccacttatgatggtaatatggcaaaagttgttgaaggtcatcgcag 1705
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>emb|AL391144.1|ATF14F8 Arabidopsis thaliana DNA chromosome 5, BAC clone F14F8 (ESSA project)
          Length = 96892

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                       
Query: 292   atgacgggaatatggcaagggttgttgaaggtcaccgcaggt 333
             |||| ||||| |||||||| |||||||||||||| |||||||
Sbjct: 50748 atgatgggaacatggcaagagttgttgaaggtcatcgcaggt 50707
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>gb|AC130529.2| Mus musculus BAC clone RP23-124O11 from chromosome 16, complete sequence
          Length = 231967

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                       
Query: 19     ggcttcagggactttgccctctcac 43
              |||||||||||||||||||||||||
Sbjct: 191823 ggcttcagggactttgccctctcac 191847



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 49     aggaaattgctctagtgcttaaag 72
              |||| |||||||||||||||||||
Sbjct: 225662 aggatattgctctagtgcttaaag 225639
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>gb|AC140206.2| Mus musculus BAC clone RP24-446O8 from chromosome 16, complete sequence
          Length = 195790

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                      
Query: 19    ggcttcagggactttgccctctcac 43
             |||||||||||||||||||||||||
Sbjct: 12751 ggcttcagggactttgccctctcac 12775



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 49    aggaaattgctctagtgcttaaag 72
             |||| |||||||||||||||||||
Sbjct: 46590 aggatattgctctagtgcttaaag 46567
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>gb|AC073556.11| Oryza sativa chromosome 3 BAC OSJNBa0091P11 genomic sequence, complete
             sequence
          Length = 160738

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 97/121 (80%)
 Strand = Plus / Plus

                                                                         
Query: 215   attccagaaccattcgacccagatggcagcactggactacatggtttcgatagcaagcaa 274
             |||||||||||||||  | |||||||| ||||| |||| ||| || || | ||| ||  |
Sbjct: 81483 attccagaaccattcttctcagatggctgcacttgacttcattgtatccacagccagtga 81542

                                                                         
Query: 275   tgttttcatccccagttatgacgggaatatggcaagggttgttgaaggtcaccgcaggta 334
             | ||||||| || | |||||| || || |||||||   |||||||||||||||| |||||
Sbjct: 81543 tattttcattcctacttatgatggtaacatggcaaaacttgttgaaggtcaccggaggta 81602

              
Query: 335   t 335
             |
Sbjct: 81603 t 81603
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>ref|NM_121579.3| Arabidopsis thaliana unknown protein AT5G15740 mRNA, complete cds
          Length = 2458

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                    
Query: 292  atgacgggaatatggcaagggttgttgaaggtcaccgcag 331
            |||| ||||| |||||||| |||||||||||||| |||||
Sbjct: 1911 atgatgggaacatggcaagagttgttgaaggtcatcgcag 1950
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>dbj|AK220896.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds,
           clone: RAFL22-45-N06
          Length = 895

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 292 atgacgggaatatggcaagggttgttgaaggtcaccgcag 331
           |||| ||||| |||||||| |||||||||||||| |||||
Sbjct: 353 atgatgggaacatggcaagagttgttgaaggtcatcgcag 392
to top
>gb|BT023458.1| Arabidopsis thaliana At5g15740 gene, complete cds
          Length = 2172

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                    
Query: 292  atgacgggaatatggcaagggttgttgaaggtcaccgcag 331
            |||| ||||| |||||||| |||||||||||||| |||||
Sbjct: 1868 atgatgggaacatggcaagagttgttgaaggtcatcgcag 1907
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>emb|BX832033.1|CNS0A1Q0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH47ZG07 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 2419

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                    
Query: 292  atgacgggaatatggcaagggttgttgaaggtcaccgcag 331
            |||| ||||| |||||||| |||||||||||||| |||||
Sbjct: 1914 atgatgggaacatggcaagagttgttgaaggtcatcgcag 1953
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>ref|XM_470295.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1401

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 95/119 (79%)
 Strand = Plus / Plus

                                                                        
Query: 215  attccagaaccattcgacccagatggcagcactggactacatggtttcgatagcaagcaa 274
            |||||||||||||||  | |||||||| ||||| |||| ||| || || | ||| ||  |
Sbjct: 1020 attccagaaccattcttctcagatggctgcacttgacttcattgtatccacagccagtga 1079

                                                                       
Query: 275  tgttttcatccccagttatgacgggaatatggcaagggttgttgaaggtcaccgcaggt 333
            | ||||||| || | |||||| || || |||||||   |||||||||||||||| ||||
Sbjct: 1080 tattttcattcctacttatgatggtaacatggcaaaacttgttgaaggtcaccggaggt 1138
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>gb|AC139100.3| Homo sapiens chromosome 18, clone, complete sequence
          Length = 276546

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 35     ccctctcacacctgaggaaattg 57
              |||||||||||||||||||||||
Sbjct: 160441 ccctctcacacctgaggaaattg 160463
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>gb|AC127503.3| Homo sapiens chromosome 18, clone RP11-245M2, complete sequence
          Length = 145418

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 35     ccctctcacacctgaggaaattg 57
              |||||||||||||||||||||||
Sbjct: 113068 ccctctcacacctgaggaaattg 113046
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>gb|AC068530.16| Homo sapiens chromosome 18, clone RP11-565D23, complete sequence
          Length = 166392

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 35    ccctctcacacctgaggaaattg 57
             |||||||||||||||||||||||
Sbjct: 64224 ccctctcacacctgaggaaattg 64246
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>dbj|AK064675.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-F02, full
           insert sequence
          Length = 1689

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 95/119 (79%)
 Strand = Plus / Plus

                                                                       
Query: 215 attccagaaccattcgacccagatggcagcactggactacatggtttcgatagcaagcaa 274
           |||||||||||||||  | |||||||| ||||| |||| ||| || || | ||| ||  |
Sbjct: 84  attccagaaccattcttctcagatggctgcacttgacttcattgtatccacagccagtga 143

                                                                      
Query: 275 tgttttcatccccagttatgacgggaatatggcaagggttgttgaaggtcaccgcaggt 333
           | ||||||| || | |||||| || || |||||||   |||||||||||||||| ||||
Sbjct: 144 tattttcattcctacttatgatggtaacatggcaaaacttgttgaaggtcaccggaggt 202
to top
>gb|AC144702.2| Danio rerio clone CH211-138D14, complete sequence
          Length = 192101

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 367    ggacaaaacttgttgaactttt 388
              ||||||||||||||||||||||
Sbjct: 150619 ggacaaaacttgttgaactttt 150598
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>gb|AC112508.2| Homo sapiens 3 BAC RP11-347G18 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 164435

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 19     ggcttcagggactttgccctct 40
              ||||||||||||||||||||||
Sbjct: 159820 ggcttcagggactttgccctct 159799
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>emb|BX323995.13| Zebrafish DNA sequence from clone RP71-86K19 in linkage group 1, complete
              sequence
          Length = 156662

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 367    ggacaaaacttgttgaactttt 388
              ||||||||||||||||||||||
Sbjct: 111025 ggacaaaacttgttgaactttt 111046
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>emb|BX537262.7| Zebrafish DNA sequence from clone DKEY-111N6 in linkage group 1,
             complete sequence
          Length = 97035

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 367   ggacaaaacttgttgaactttt 388
             ||||||||||||||||||||||
Sbjct: 88789 ggacaaaacttgttgaactttt 88768
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>ref|NM_174241.2| Bos taurus annexin A8 (ANXA8), mRNA
          Length = 1901

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 427 tctctgctgctgtgaaggaggcacaccagaatc 459
           ||||||||||  || ||||||||||||||||||
Sbjct: 555 tctctgctgccctgcaggaggcacaccagaatc 523
to top
>gb|AC182667.2| Populus trichocarpa clone Pop1-18L12, complete sequence
          Length = 32928

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                      
Query: 278   tttcatccccagttatgacgggaatatggcaagggttgttgaaggtcaccgcaggta 334
             |||||| ||||  ||||| || || |||||||  ||||| |||||||||||||||||
Sbjct: 29875 tttcattcccacctatgatggaaacatggcaaaagttgtggaaggtcaccgcaggta 29931
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>gb|BC113321.1| Bos taurus annexin A8, mRNA (cDNA clone MGC:137766 IMAGE:8082583),
           complete cds
          Length = 1972

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 427 tctctgctgctgtgaaggaggcacaccagaatc 459
           ||||||||||  || ||||||||||||||||||
Sbjct: 604 tctctgctgccctgcaggaggcacaccagaatc 572
to top
>gb|AF417637.1|AF417637 Bos taurus annexin VIII mRNA, complete cds
          Length = 1901

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 427 tctctgctgctgtgaaggaggcacaccagaatc 459
           ||||||||||  || ||||||||||||||||||
Sbjct: 555 tctctgctgccctgcaggaggcacaccagaatc 523
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                
Query: 501     cccaaggaagaggactatttctattctaatccc 533
               ||||||||||||| ||| ||||| |||||||||
Sbjct: 2051066 cccaaggaagagggctacttctactctaatccc 2051034



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                            
Query: 216      ttccagaaccattcgacccagatggcagcactggactacatggt 259
                ||||||||||||||| | || |||||||| ||||| ||| ||||
Sbjct: 30248055 ttccagaaccattcgtcacaaatggcagctctggattacttggt 30248098
to top
>dbj|AP005647.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0026E05
          Length = 159860

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 501    cccaaggaagaggactatttctattctaatccc 533
              ||||||||||||| ||| ||||| |||||||||
Sbjct: 101274 cccaaggaagagggctacttctactctaatccc 101242
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>gb|BT021646.1| Bos taurus annexin A8 (ANXA8), mRNA, complete cds
          Length = 1648

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 427 tctctgctgctgtgaaggaggcacaccagaatc 459
           ||||||||||  || ||||||||||||||||||
Sbjct: 587 tctctgctgccctgcaggaggcacaccagaatc 555
to top
>gb|BT021645.1| Bos taurus annexin A8 (ANXA8), mRNA, complete cds
          Length = 1648

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 427 tctctgctgctgtgaaggaggcacaccagaatc 459
           ||||||||||  || ||||||||||||||||||
Sbjct: 587 tctctgctgccctgcaggaggcacaccagaatc 555
to top
>emb|X80301.1|NTAXI1G N.tabacum axi 1 gene
          Length = 6650

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 33   tgccctctcacacctgaggaaattg 57
            ||||||||||| |||||||||||||
Sbjct: 3842 tgccctctcactcctgaggaaattg 3866
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>gb|L22247.1|NEMSNUB Ascaris lumbricoides small nuclear RNA (snRNA) U2-1 gene, and U2-2
            pseudogene
          Length = 6806

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 426  ttctctgctgctgtgaaggag 446
            |||||||||||||||||||||
Sbjct: 2616 ttctctgctgctgtgaaggag 2636
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>gb|L03208.1|TOBAIGA Nicotiana tabacum mRNA sequence
          Length = 2188

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 33   tgccctctcacacctgaggaaattg 57
            ||||||||||| |||||||||||||
Sbjct: 1224 tgccctctcactcctgaggaaattg 1248
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>ref|XM_467575.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1533

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                        
Query: 216  ttccagaaccattcgacccagatggcagcactggactacatggt 259
            ||||||||||||||| | || |||||||| ||||| ||| ||||
Sbjct: 1174 ttccagaaccattcgtcacaaatggcagctctggattacttggt 1217
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>ref|XM_420851.1| PREDICTED: Gallus gallus similar to RNA polymerase 1-4; RNA
            polymerase I (194 kDa subunit) (LOC422910), mRNA
          Length = 5328

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 116  tgaaatctatggaggtgaaa 135
            ||||||||||||||||||||
Sbjct: 2268 tgaaatctatggaggtgaaa 2287
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>gb|AC113028.15| Mus musculus chromosome 5, clone RP23-205D3, complete sequence
          Length = 275646

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 390    gatcacttccaaggaggttc 409
              ||||||||||||||||||||
Sbjct: 235204 gatcacttccaaggaggttc 235223
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>gb|AC163687.5| Mus musculus BAC clone RP23-3H13 from chromosome 17, complete sequence
          Length = 220643

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 21    cttcagggactttgccctct 40
             ||||||||||||||||||||
Sbjct: 90106 cttcagggactttgccctct 90087
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>gb|AC119906.6| Mus musculus chromosome 5, clone RP24-239D13, complete sequence
          Length = 257203

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 390   gatcacttccaaggaggttc 409
             ||||||||||||||||||||
Sbjct: 76785 gatcacttccaaggaggttc 76804
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>gb|AF467442.1| Homo sapiens Smith-Magenis syndrome chromosome region candidate 5
            protein (SMCR5) mRNA, complete cds
          Length = 2843

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 360  ttggacaggacaaaacttgt 379
            ||||||||||||||||||||
Sbjct: 1571 ttggacaggacaaaacttgt 1552
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>gb|AC122336.4| Mus musculus BAC clone RP23-351K21 from chromosome 7, complete sequence
          Length = 189296

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 230   gacccagatggcagcactgg 249
             ||||||||||||||||||||
Sbjct: 12194 gacccagatggcagcactgg 12213
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>gb|AC018545.14| Homo sapiens 3 BAC RP11-145F16 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 170359

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 16    gtaggcttcagggactttgc 35
             ||||||||||||||||||||
Sbjct: 18183 gtaggcttcagggactttgc 18202
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>gb|AC095402.7| Rattus norvegicus 2 BAC CH230-7A22 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 224026

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 604    aagtattgatgctgacctga 623
              ||||||||||||||||||||
Sbjct: 204628 aagtattgatgctgacctga 204609
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>emb|AL022344.3|HSY214H10 Human DNA sequence from clone XX-Y214H10 on chromosome 10 Contains a
              vomeronasal receptor (V1R) pseudogene, a cubilin (intrinsic
              factor-cobalamin receptor) (CUBN) pseudogene, gene
              KIAA0187, two novel genes, the gene for a novel protein
              similar to Ras suppressor protein 1 (RSU1) and four CpG
              islands, complete sequence
          Length = 197864

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 591    aagcattgcaaataagtatt 610
              ||||||||||||||||||||
Sbjct: 183486 aagcattgcaaataagtatt 183505
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>emb|BX005225.20| Zebrafish DNA sequence from clone DKEY-34L15 in linkage group 14,
              complete sequence
          Length = 206042

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 42     acacctgaggaaattgctct 61
              ||||||||||||||||||||
Sbjct: 196710 acacctgaggaaattgctct 196729
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>gb|AC023933.9| Homo sapiens chromosome 8, clone RP11-553F15, complete sequence
          Length = 176518

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 597   tgcaaataagtattgatgct 616
             ||||||||||||||||||||
Sbjct: 66345 tgcaaataagtattgatgct 66364
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>gb|AC026827.6| Homo sapiens chromosome 8, clone RP11-678C14, complete sequence
          Length = 186183

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 597    tgcaaataagtattgatgct 616
              ||||||||||||||||||||
Sbjct: 169367 tgcaaataagtattgatgct 169386
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>gb|AC005713.8|AC005713 Drosophila melanogaster, chromosome 2R, region 54A1-54B2, BAC clone
              BACR48A11, complete sequence
          Length = 157507

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 367    ggacaaaacttgttgaactt 386
              ||||||||||||||||||||
Sbjct: 131924 ggacaaaacttgttgaactt 131943
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>gb|AC012075.10| Homo sapiens BAC clone RP11-492P1 from 2, complete sequence
          Length = 185437

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 589   aaaagcattgcaaataagta 608
             ||||||||||||||||||||
Sbjct: 62091 aaaagcattgcaaataagta 62110
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>dbj|BA000013.4| Mesorhizobium loti MAFF303099 pMLa DNA, cpmplete genome
          Length = 351911

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 493  ctggccggcccaaggaagaggact 516
            |||||||||||||||||| |||||
Sbjct: 8334 ctggccggcccaaggaagcggact 8357
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>gb|AC122129.9| Homo sapiens chromosome 17, clone RP1-253P7, complete sequence
          Length = 159868

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 360   ttggacaggacaaaacttgt 379
             ||||||||||||||||||||
Sbjct: 35697 ttggacaggacaaaacttgt 35716
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>dbj|AP005284.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:B1121A12
          Length = 138796

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                         
Query: 216   ttccagaaccattcgacccagatggcagcactggactacatggt 259
             ||||||||||||||| | || |||||||| ||||| ||| ||||
Sbjct: 48972 ttccagaaccattcgtcacaaatggcagctctggattacttggt 49015
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>gb|AC154288.2| Mus musculus BAC clone RP23-447G10 from 17, complete sequence
          Length = 195195

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 21     cttcagggactttgccctct 40
              ||||||||||||||||||||
Sbjct: 169364 cttcagggactttgccctct 169345
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>gb|AC153792.4| Mus musculus BAC clone RP23-435D23 from 7, complete sequence
          Length = 224041

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 230   gacccagatggcagcactgg 249
             ||||||||||||||||||||
Sbjct: 86785 gacccagatggcagcactgg 86804
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>gb|AE003803.4| Drosophila melanogaster chromosome 2R, section 47 of 73 of the
            complete sequence
          Length = 290783

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 367  ggacaaaacttgttgaactt 386
            ||||||||||||||||||||
Sbjct: 7410 ggacaaaacttgttgaactt 7429
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>dbj|AP005625.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1905B11, complete
             sequence
          Length = 184137

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 597   tgcaaataagtattgatgct 616
             ||||||||||||||||||||
Sbjct: 35135 tgcaaataagtattgatgct 35154
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>emb|AL354000.7|HS253P07 Homo from PAC RP1-253P07 and  PAC RP1-281I13 (complete covert by PAC
              RP1-253P07), complete sequence
          Length = 159876

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 360    ttggacaggacaaaacttgt 379
              ||||||||||||||||||||
Sbjct: 124180 ttggacaggacaaaacttgt 124161
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>emb|CT009575.8| Mouse DNA sequence from clone RP23-107N17 on chromosome 17, complete
             sequence
          Length = 226188

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 21    cttcagggactttgccctct 40
             ||||||||||||||||||||
Sbjct: 10969 cttcagggactttgccctct 10988
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>dbj|AB036794.1| Drosophila melanogaster genomic DNA, chromosome 2R, map 54A, flanking
             sequence of P element insertion site
          Length = 32985

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 367   ggacaaaacttgttgaactt 386
             ||||||||||||||||||||
Sbjct: 23213 ggacaaaacttgttgaactt 23232


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,419,243
Number of Sequences: 3902068
Number of extensions: 5419243
Number of successful extensions: 98051
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 97708
Number of HSP's gapped (non-prelim): 343
length of query: 633
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 610
effective length of database: 17,143,297,704
effective search space: 10457411599440
effective search space used: 10457411599440
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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