ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags4b09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT017074.1| Zea mays clone EL01N0359G01.c mRNA sequence 111 3e-21
2gb|AY104351.1| Zea mays PCO136431 mRNA sequence 111 3e-21
3ref|XM_469396.1| Oryza sativa (japonica cultivar-group), mRNA 105 2e-19
4dbj|AK066652.1| Oryza sativa (japonica cultivar-group) cDNA clon... 105 2e-19
5dbj|AK099383.1| Oryza sativa (japonica cultivar-group) cDNA clon... 98 4e-17
6gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 74 6e-10
7dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 74 6e-10
8gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genom... 74 6e-10
9gb|AC164883.5| Mus musculus BAC clone RP23-88A20 from chromosome... 48 0.032
10ref|XM_652015.1| Entamoeba histolytica HM-1:IMSS pescadillo (4.t... 48 0.032
11ref|XM_643834.1| Entamoeba histolytica HM-1:IMSS pescadillo (368... 48 0.032
12ref|XM_623564.1| PREDICTED: Apis mellifera similar to CG33196-PB... 48 0.032
13gb|AC158141.8| Mus musculus chromosome 5, clone RP23-281M20, com... 44 0.50
14gb|M98350.1|XXXPKLHO Unknown bacterial sp. pyruvate kinase-like ... 44 0.50
15emb|AJ512946.1|LDE512946 Lactobacillus delbrueckii subsp. lactis... 44 0.50
16dbj|AB234906.1| Verbena x hybrida mRNA for anthocyanidin synthas... 44 0.50
17dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.50
18dbj|AP004176.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.50
19gb|L48487.2|LBAPRTB Lactobacillus delbrueckii proteinase precurs... 44 0.50
20gb|DQ114966.1| Moneuplotes crassus clone pEC17 unknown sequence;... 44 0.50
21gb|CP000057.1| Haemophilus influenzae strain 86-028NP, complete ... 42 2.0
22gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence 42 2.0
23ref|XM_453738.1| Kluyveromyces lactis NRRL Y-1140, KLLA0D15268g ... 42 2.0
24emb|CR382124.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 42 2.0
25dbj|AK054685.1| Homo sapiens cDNA FLJ30123 fis, clone BRACE1000092 42 2.0
26gb|AC022558.9| Homo sapiens chromosome 15, clone RP11-90B9, comp... 42 2.0
27dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
28gb|AE009532.1| Brucella melitensis 16M chromosome I, section 89 ... 42 2.0
29gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I... 42 2.0
30dbj|AP003545.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
31gb|U78089.1|BAU78089 Brucella abortus (mazG) gene, partial cds, ... 42 2.0
32gb|L42023.1| Haemophilus influenzae Rd KW20, complete genome 42 2.0
33emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I,... 42 2.0
34dbj|AB025261.1| Sus scrofa mRNA for myosin heavy chain 2b, compl... 42 2.0
35ref|NM_203195.1| Arabidopsis thaliana transcription factor AT5G5... 40 7.8
36ref|NM_124566.3| Arabidopsis thaliana transcription factor AT5G5... 40 7.8
37gb|BC082537.1| Mus musculus RIKEN cDNA 2900042E01 gene, mRNA (cD... 40 7.8
38ref|NM_175189.4| Mus musculus RIKEN cDNA 2900042E01 gene (290004... 40 7.8
39emb|CR396582.13| Zebrafish DNA sequence from clone DKEY-283B1 in... 40 7.8
40gb|AC138284.9| Mus musculus chromosome 9, clone RP23-356D13, com... 40 7.8
41emb|Z75551.1|CET28H10 Caenorhabditis elegans Cosmid T28H10, comp... 40 7.8
42gb|AC125368.7| Medicago truncatula clone mth2-13h15, complete se... 40 7.8
43gb|AC135797.13| Medicago truncatula clone mth2-11f7, complete se... 40 7.8
44emb|Z82216.1|HS75N13 Human DNA sequence from clone RP1-75N13 on ... 40 7.8
45gb|AY141220.1| Arabidopsis thaliana MADS-box protein AGL71 mRNA,... 40 7.8
46gb|AC105600.5| Rattus norvegicus 4 BAC CH230-209E1 (Children's H... 40 7.8
47emb|CR384099.6| Zebrafish DNA sequence from clone DKEY-266I18 in... 40 7.8
48gb|AC003001.1| Homo sapiens chromosome X, clone HRPC928E24, comp... 40 7.8
49gb|AC012048.11| Homo sapiens chromosome 10 clone RP11-43N22, com... 40 7.8
50dbj|AK138438.1| Mus musculus adult male hypothalamus cDNA, RIKEN... 40 7.8
51dbj|AK158265.1| Mus musculus adult inner ear cDNA, RIKEN full-le... 40 7.8
52emb|BX649555.9| Zebrafish DNA sequence from clone CH211-117C13 i... 40 7.8
53dbj|AK013637.1| Mus musculus adult male hippocampus cDNA, RIKEN ... 40 7.8
54gb|AC020905.9| Homo sapiens chromosome 19 clone CTB-70G10, compl... 40 7.8
55dbj|AK081154.1| Mus musculus 10 days neonate cerebellum cDNA, RI... 40 7.8
56ref|NM_073734.1| Caenorhabditis elegans T28H10.1 (T28H10.1) mRNA... 40 7.8
57emb|BX640536.6| Zebrafish DNA sequence from clone CH211-191A6 in... 40 7.8
58gb|AC155241.2| Mus musculus BAC clone RP24-485P18 from chromosom... 40 7.8
59gb|AC021068.17|AC021068 Homo sapiens 3 BAC RP11-48O22 (Roswell P... 40 7.8
60gb|AC016138.8| Homo sapiens 3 BAC RP11-91B3 (Roswell Park Cancer... 40 7.8
61dbj|AB025623.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 7.8
62dbj|AP004241.2| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 7.8
63gb|AC147645.3| Gallus gallus BAC clone CH261-121C23 from chromos... 40 7.8
64emb|Z81486.1|CEC53A5 Caenorhabditis elegans Cosmid C53A5, comple... 40 7.8
65dbj|AP006359.1| Lotus japonicus genomic DNA, chromosome 4, clone... 40 7.8
66dbj|AP006357.1| Lotus japonicus genomic DNA, chromosome 4, clone... 40 7.8 
>gb|BT017074.1| Zea mays clone EL01N0359G01.c mRNA sequence
          Length = 1307

 Score =  111 bits (56), Expect = 3e-21
 Identities = 133/155 (85%), Gaps = 3/155 (1%)
 Strand = Plus / Plus

                                                                       
Query: 7   tttggangaactgtttcctgggnaaggtagaaggagctccatttgatgaaacagcatcaa 66
           |||||| | |||||||| |||| |||| |||||||||||||||| | |||| || |  ||
Sbjct: 317 tttggagggactgtttcatggg-aagg-agaaggagctccatttaaagaaatag-acgaa 373

                                                                       
Query: 67  gatatcacccatcagattgttgacaggccaacccagagccatgttttcctctccaggcag 126
           |||||||| || ||||||||||| ||||| || || ||||||||||||||||||||| | 
Sbjct: 374 gatatcactcaccagattgttgataggccgacacaaagccatgttttcctctccagggat 433

                                              
Query: 127 tatgttcaaccacaatggatttttgattgtgtaaa 161
           |||||||||||||| ||| | ||||||||||||||
Sbjct: 434 tatgttcaaccacagtgggtctttgattgtgtaaa 468



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 43/47 (91%), Gaps = 1/47 (2%)
 Strand = Plus / Plus

                                                          
Query: 194 ttgttggaagggtgcctccacc-acatttatctccttttgtggacaa 239
           |||||||||| || |||||||| |||||| |||||||||||||||||
Sbjct: 501 ttgttggaagagtacctccacccacatttgtctccttttgtggacaa 547



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 58/69 (84%)
 Strand = Plus / Plus

                                                                       
Query: 381 tgctaaaaagaagagggagttggagaagcaagagaagaaataccacgacgagctgaagat 440
           |||| ||||||||||| || |||||| || ||||||| |||||  ||| || ||||||| 
Sbjct: 704 tgctgaaaagaagaggaagctggagatgctagagaagcaatacatcgatgaactgaagaa 763

                    
Query: 441 ggaaattga 449
           |||||||||
Sbjct: 764 ggaaattga 772
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>gb|AY104351.1| Zea mays PCO136431 mRNA sequence
          Length = 1077

 Score =  111 bits (56), Expect = 3e-21
 Identities = 133/155 (85%), Gaps = 3/155 (1%)
 Strand = Plus / Plus

                                                                       
Query: 7   tttggangaactgtttcctgggnaaggtagaaggagctccatttgatgaaacagcatcaa 66
           |||||| | |||||||| |||| |||| |||||||||||||||| | |||| || |  ||
Sbjct: 696 tttggagggactgtttcatggg-aagg-agaaggagctccatttaaagaaatag-acgaa 752

                                                                       
Query: 67  gatatcacccatcagattgttgacaggccaacccagagccatgttttcctctccaggcag 126
           |||||||| || ||||||||||| ||||| || || ||||||||||||||||||||| | 
Sbjct: 753 gatatcactcaccagattgttgataggccgacacaaagccatgttttcctctccagggat 812

                                              
Query: 127 tatgttcaaccacaatggatttttgattgtgtaaa 161
           |||||||||||||| ||| | ||||||||||||||
Sbjct: 813 tatgttcaaccacagtgggtctttgattgtgtaaa 847



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                         
Query: 194 ttgttggaagggtgcctccaccacatttatctccttttgtggacaa 239
           |||||||||| || |||||||||||||| |||||||||||||||||
Sbjct: 880 ttgttggaagagtacctccaccacatttgtctccttttgtggacaa 925
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>ref|XM_469396.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2063

 Score =  105 bits (53), Expect = 2e-19
 Identities = 105/121 (86%), Gaps = 1/121 (0%)
 Strand = Plus / Plus

                                                                        
Query: 35   agaaggagctccatttgatgaaacagcatcaagatatcacccatcagattgttgacaggc 94
            |||||||||||| |||||||| |||| || |||| ||||| |||||||||||||| || |
Sbjct: 1173 agaaggagctccttttgatgagacag-atgaagacatcactcatcagattgttgatagac 1231

                                                                        
Query: 95   caacccagagccatgttttcctctccaggcagtatgttcaaccacaatggatttttgatt 154
            | ||||| ||||| ||||||||||| ||| |||||||||||||||| ||||| | |||||
Sbjct: 1232 cgacccaaagccacgttttcctctctagggagtatgttcaaccacagtggatatatgatt 1291

             
Query: 155  g 155
            |
Sbjct: 1292 g 1292



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 70/80 (87%)
 Strand = Plus / Plus

                                                                        
Query: 190  tatattgttggaagggtgcctccaccacatttatctccttttgtggacaacgatcaagag 249
            |||||||| || |||||||||||||||||||||||||| ||||||||||| |||  ||||
Sbjct: 1327 tatattgtcgggagggtgcctccaccacatttatctccctttgtggacaatgatgcagag 1386

                                
Query: 250  ggtcatatgcctgactatgc 269
            ||| | || ||||| |||||
Sbjct: 1387 ggttacattcctgagtatgc 1406
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>dbj|AK066652.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013069A12, full
            insert sequence
          Length = 2199

 Score =  105 bits (53), Expect = 2e-19
 Identities = 105/121 (86%), Gaps = 1/121 (0%)
 Strand = Plus / Plus

                                                                        
Query: 35   agaaggagctccatttgatgaaacagcatcaagatatcacccatcagattgttgacaggc 94
            |||||||||||| |||||||| |||| || |||| ||||| |||||||||||||| || |
Sbjct: 1187 agaaggagctccttttgatgagacag-atgaagacatcactcatcagattgttgatagac 1245

                                                                        
Query: 95   caacccagagccatgttttcctctccaggcagtatgttcaaccacaatggatttttgatt 154
            | ||||| ||||| ||||||||||| ||| |||||||||||||||| ||||| | |||||
Sbjct: 1246 cgacccaaagccacgttttcctctctagggagtatgttcaaccacagtggatatatgatt 1305

             
Query: 155  g 155
            |
Sbjct: 1306 g 1306



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 70/80 (87%)
 Strand = Plus / Plus

                                                                        
Query: 190  tatattgttggaagggtgcctccaccacatttatctccttttgtggacaacgatcaagag 249
            |||||||| || |||||||||||||||||||||||||| ||||||||||| |||  ||||
Sbjct: 1341 tatattgtcgggagggtgcctccaccacatttatctccctttgtggacaatgatgcagag 1400

                                
Query: 250  ggtcatatgcctgactatgc 269
            ||| | || ||||| |||||
Sbjct: 1401 ggttacattcctgagtatgc 1420
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>dbj|AK099383.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033074F24, full
            insert sequence
          Length = 2131

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 104/121 (85%), Gaps = 1/121 (0%)
 Strand = Plus / Plus

                                                                        
Query: 35   agaaggagctccatttgatgaaacagcatcaagatatcacccatcagattgttgacaggc 94
            |||||||||||| |||||||| |||| || |||| ||||| |||||||||||||| || |
Sbjct: 1187 agaaggagctccttttgatgagacag-atgaagacatcactcatcagattgttgatagac 1245

                                                                        
Query: 95   caacccagagccatgttttcctctccaggcagtatgttcaaccacaatggatttttgatt 154
            | ||||| |||||  |||||||||| ||| |||||||||||||||| ||||| | |||||
Sbjct: 1246 cgacccaaagccactttttcctctctagggagtatgttcaaccacagtggatatatgatt 1305

             
Query: 155  g 155
            |
Sbjct: 1306 g 1306



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 70/80 (87%)
 Strand = Plus / Plus

                                                                        
Query: 190  tatattgttggaagggtgcctccaccacatttatctccttttgtggacaacgatcaagag 249
            |||||||| || |||||||||||||||||||||||||| ||||||||||| |||  ||||
Sbjct: 1341 tatattgtcgggagggtgcctccaccacatttatctccctttgtggacaatgatgcagag 1400

                                
Query: 250  ggtcatatgcctgactatgc 269
            ||| | || ||||| |||||
Sbjct: 1401 ggttacattcctgagtatgc 1420
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 67/77 (87%)
 Strand = Plus / Plus

                                                                            
Query: 79       cagattgttgacaggccaacccagagccatgttttcctctccaggcagtatgttcaacca 138
                ||||||||||| || || ||||| ||||| ||||||||||| ||| ||||||||||||||
Sbjct: 27741837 cagattgttgatagaccgacccaaagccacgttttcctctctagggagtatgttcaacca 27741896

                                 
Query: 139      caatggatttttgattg 155
                || ||||| | ||||||
Sbjct: 27741897 cagtggatatatgattg 27741913



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 60/68 (88%)
 Strand = Plus / Plus

                                                                            
Query: 202      agggtgcctccaccacatttatctccttttgtggacaacgatcaagagggtcatatgcct 261
                |||||||||||||||||||||||||| ||||||||||| |||  ||||||| | || |||
Sbjct: 27742500 agggtgcctccaccacatttatctccctttgtggacaatgatgcagagggttacattcct 27742559

                        
Query: 262      gactatgc 269
                || |||||
Sbjct: 27742560 gagtatgc 27742567
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 67/77 (87%)
 Strand = Plus / Plus

                                                                            
Query: 79       cagattgttgacaggccaacccagagccatgttttcctctccaggcagtatgttcaacca 138
                ||||||||||| || || ||||| ||||| ||||||||||| ||| ||||||||||||||
Sbjct: 27833160 cagattgttgatagaccgacccaaagccacgttttcctctctagggagtatgttcaacca 27833219

                                 
Query: 139      caatggatttttgattg 155
                || ||||| | ||||||
Sbjct: 27833220 cagtggatatatgattg 27833236



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 60/68 (88%)
 Strand = Plus / Plus

                                                                            
Query: 202      agggtgcctccaccacatttatctccttttgtggacaacgatcaagagggtcatatgcct 261
                |||||||||||||||||||||||||| ||||||||||| |||  ||||||| | || |||
Sbjct: 27833823 agggtgcctccaccacatttatctccctttgtggacaatgatgcagagggttacattcct 27833882

                        
Query: 262      gactatgc 269
                || |||||
Sbjct: 27833883 gagtatgc 27833890
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>gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genomic sequence, complete
             sequence
          Length = 119329

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 67/77 (87%)
 Strand = Plus / Minus

                                                                         
Query: 79    cagattgttgacaggccaacccagagccatgttttcctctccaggcagtatgttcaacca 138
             ||||||||||| || || ||||| ||||| ||||||||||| ||| ||||||||||||||
Sbjct: 72057 cagattgttgatagaccgacccaaagccacgttttcctctctagggagtatgttcaacca 71998

                              
Query: 139   caatggatttttgattg 155
             || ||||| | ||||||
Sbjct: 71997 cagtggatatatgattg 71981



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                         
Query: 202   agggtgcctccaccacatttatctccttttgtggacaacgatcaagagggtcatatgcct 261
             |||||||||||||||||||||||||| ||||||||||| |||  ||||||| | || |||
Sbjct: 71394 agggtgcctccaccacatttatctccctttgtggacaatgatgcagagggttacattcct 71335

                     
Query: 262   gactatgc 269
             || |||||
Sbjct: 71334 gagtatgc 71327
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>gb|AC164883.5| Mus musculus BAC clone RP23-88A20 from chromosome 15, complete sequence
          Length = 260402

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 442   gaaattgagggaaccactttctct 465
             ||||||||||||||||||||||||
Sbjct: 95781 gaaattgagggaaccactttctct 95804
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>ref|XM_652015.1| Entamoeba histolytica HM-1:IMSS pescadillo (4.t00102) partial mRNA
          Length = 1593

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 131  ttcaaccacaatggatttttgattgtgt 158
            ||||||| ||||||||||||||||||||
Sbjct: 1163 ttcaaccccaatggatttttgattgtgt 1190
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>ref|XM_643834.1| Entamoeba histolytica HM-1:IMSS pescadillo (368.t00004)  partial mRNA
          Length = 1626

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 131  ttcaaccacaatggatttttgattgtgt 158
            ||||||| ||||||||||||||||||||
Sbjct: 1151 ttcaaccccaatggatttttgattgtgt 1178
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>ref|XM_623564.1| PREDICTED: Apis mellifera similar to CG33196-PB (LOC551170), mRNA
          Length = 31083

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 127  tatgttcaaccacaatggatttttgatt 154
            ||||| ||||||||||||||||||||||
Sbjct: 1171 tatgtacaaccacaatggatttttgatt 1198
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>gb|AC158141.8| Mus musculus chromosome 5, clone RP23-281M20, complete sequence
          Length = 220396

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 480   gaaggctgatagtgcacctgat 501
             ||||||||||||||||||||||
Sbjct: 86897 gaaggctgatagtgcacctgat 86876
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>gb|M98350.1|XXXPKLHO Unknown bacterial sp. pyruvate kinase-like protein (PKL) gene, 3'
           end and hydrophobic protein (HI) gene, 5' end
          Length = 2082

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 542 ctgaaaaggatgctgatgacat 563
           ||||||||||||||||||||||
Sbjct: 269 ctgaaaaggatgctgatgacat 290
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>emb|AJ512946.1|LDE512946 Lactobacillus delbrueckii subsp. lactis prtB gene for proteinase B
          Length = 6674

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 532  gttgaacaagctgaaaaggatgctga 557
            |||||||| |||||||||||||||||
Sbjct: 5532 gttgaacaggctgaaaaggatgctga 5557
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>dbj|AB234906.1| Verbena x hybrida mRNA for anthocyanidin synthase, complete cds,
           cultivar: Tapien Pink
          Length = 1375

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 414 gaagaaataccacgacgagctgaaga 439
           |||||||| |||||||||||||||||
Sbjct: 264 gaagaaatgccacgacgagctgaaga 289
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 397     gagttggagaagcaagagaaga 418
               ||||||||||||||||||||||
Sbjct: 8944949 gagttggagaagcaagagaaga 8944928
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>dbj|AP004176.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1057_E05
          Length = 103229

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 397   gagttggagaagcaagagaaga 418
             ||||||||||||||||||||||
Sbjct: 71106 gagttggagaagcaagagaaga 71085
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>gb|L48487.2|LBAPRTB Lactobacillus delbrueckii proteinase precursor (prtB) gene, complete
            cds
          Length = 8775

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 532  gttgaacaagctgaaaaggatgctga 557
            |||||||| |||||||||||||||||
Sbjct: 7639 gttgaacaggctgaaaaggatgctga 7664
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>gb|DQ114966.1| Moneuplotes crassus clone pEC17 unknown sequence; macronuclear
          Length = 3025

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 398  agttggagaagcaagagaagaa 419
            ||||||||||||||||||||||
Sbjct: 1050 agttggagaagcaagagaagaa 1071
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>gb|CP000057.1| Haemophilus influenzae strain 86-028NP, complete genome
          Length = 1913428

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 527    cagctgttgaacaagctgaaa 547
              |||||||||||||||||||||
Sbjct: 813754 cagctgttgaacaagctgaaa 813734
to top
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence
          Length = 2107794

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 47      atttgatgaaacagcatcaag 67
               |||||||||||||||||||||
Sbjct: 1035489 atttgatgaaacagcatcaag 1035509
to top
>ref|XM_453738.1| Kluyveromyces lactis NRRL Y-1140, KLLA0D15268g predicted mRNA
          Length = 1818

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 130  gttcaaccacaatggatttttgatt 154
            |||||||| ||||||||||||||||
Sbjct: 1252 gttcaacctcaatggatttttgatt 1276
to top
>emb|CR382124.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-1140
               of Kluyveromyces lactis
          Length = 1715506

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 130     gttcaaccacaatggatttttgatt 154
               |||||||| ||||||||||||||||
Sbjct: 1298406 gttcaacctcaatggatttttgatt 1298430
to top
>dbj|AK054685.1| Homo sapiens cDNA FLJ30123 fis, clone BRACE1000092
          Length = 2258

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 394 agggagttggagaagcaagagaaga 418
           ||||||||||||| |||||||||||
Sbjct: 592 agggagttggagaggcaagagaaga 616
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>gb|AC022558.9| Homo sapiens chromosome 15, clone RP11-90B9, complete sequence
          Length = 186403

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 394    agggagttggagaagcaagagaaga 418
              ||||||||||||| |||||||||||
Sbjct: 102873 agggagttggagaggcaagagaaga 102897
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 398      agttggagaagcaagagaaga 418
                |||||||||||||||||||||
Sbjct: 15396455 agttggagaagcaagagaaga 15396475
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>gb|AE009532.1| Brucella melitensis 16M chromosome I, section 89 of 195 of the complete
             sequence
          Length = 10171

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 47    atttgatgaaacagcatcaag 67
             |||||||||||||||||||||
Sbjct: 10023 atttgatgaaacagcatcaag 10003
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>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence
          Length = 2124241

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 47      atttgatgaaacagcatcaag 67
               |||||||||||||||||||||
Sbjct: 1052659 atttgatgaaacagcatcaag 1052679
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>dbj|AP003545.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0613F06
          Length = 184289

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 398   agttggagaagcaagagaaga 418
             |||||||||||||||||||||
Sbjct: 63970 agttggagaagcaagagaaga 63990
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>gb|U78089.1|BAU78089 Brucella abortus (mazG) gene, partial cds, and UDP-glucose epimerase
            (galE) and alcohol dehydrogenase (adh) genes, complete
            cds
          Length = 5907

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 47   atttgatgaaacagcatcaag 67
            |||||||||||||||||||||
Sbjct: 2954 atttgatgaaacagcatcaag 2934
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>gb|L42023.1| Haemophilus influenzae Rd KW20, complete genome
          Length = 1830138

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 527    cagctgttgaacaagctgaaa 547
              |||||||||||||||||||||
Sbjct: 632801 cagctgttgaacaagctgaaa 632781
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>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain
               2308
          Length = 2121359

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 47      atttgatgaaacagcatcaag 67
               |||||||||||||||||||||
Sbjct: 1049810 atttgatgaaacagcatcaag 1049830
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>dbj|AB025261.1| Sus scrofa mRNA for myosin heavy chain 2b, complete cds
          Length = 5929

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 429  cgagctgaagatggaaattga 449
            |||||||||||||||||||||
Sbjct: 3725 cgagctgaagatggaaattga 3745
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>ref|NM_203195.1| Arabidopsis thaliana transcription factor AT5G51870 transcript
           variant AT5G51870.2 mRNA, complete cds
          Length = 585

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 430 gagctgaagatggaaattga 449
           ||||||||||||||||||||
Sbjct: 268 gagctgaagatggaaattga 287
to top
>ref|NM_124566.3| Arabidopsis thaliana transcription factor AT5G51870 transcript
           variant AT5G51870.1 mRNA, complete cds
          Length = 624

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 430 gagctgaagatggaaattga 449
           ||||||||||||||||||||
Sbjct: 268 gagctgaagatggaaattga 287
to top
>gb|BC082537.1| Mus musculus RIKEN cDNA 2900042E01 gene, mRNA (cDNA clone
           IMAGE:5685535), partial cds
          Length = 3027

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 388 aagaagagggagttggagaagcaa 411
           ||||||||| ||||||||||||||
Sbjct: 796 aagaagaggaagttggagaagcaa 819
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>ref|NM_175189.4| Mus musculus RIKEN cDNA 2900042E01 gene (2900042E01Rik), mRNA
          Length = 3103

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 388 aagaagagggagttggagaagcaa 411
           ||||||||| ||||||||||||||
Sbjct: 882 aagaagaggaagttggagaagcaa 905
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>emb|CR396582.13| Zebrafish DNA sequence from clone DKEY-283B1 in linkage group 3, complete
              sequence
          Length = 154857

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 107    atgttttcctctccaggcag 126
              ||||||||||||||||||||
Sbjct: 137812 atgttttcctctccaggcag 137793
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>gb|AC138284.9| Mus musculus chromosome 9, clone RP23-356D13, complete sequence
          Length = 220266

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 388    aagaagagggagttggagaagcaa 411
              ||||||||| ||||||||||||||
Sbjct: 169143 aagaagaggaagttggagaagcaa 169166
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>emb|Z75551.1|CET28H10 Caenorhabditis elegans Cosmid T28H10, complete sequence
          Length = 14915

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 133  caaccacaatggatttttga 152
            ||||||||||||||||||||
Sbjct: 6145 caaccacaatggatttttga 6164
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>gb|AC125368.7| Medicago truncatula clone mth2-13h15, complete sequence
          Length = 124271

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 127   tatgttcaaccacaatggatttttgattgtgt 158
             |||||||||||||||||| | ||||| |||||
Sbjct: 83878 tatgttcaaccacaatgggtatttgactgtgt 83909
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>gb|AC135797.13| Medicago truncatula clone mth2-11f7, complete sequence
          Length = 118242

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 127   tatgttcaaccacaatggatttttgattgtgt 158
             |||||||||||||||||| | ||||| |||||
Sbjct: 77849 tatgttcaaccacaatgggtatttgactgtgt 77880
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>emb|Z82216.1|HS75N13 Human DNA sequence from clone RP1-75N13 on chromosome Xq21.1, complete
             sequence
          Length = 141851

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 134   aaccacaatggatttttgat 153
             ||||||||||||||||||||
Sbjct: 33184 aaccacaatggatttttgat 33203
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>gb|AY141220.1| Arabidopsis thaliana MADS-box protein AGL71 mRNA, complete cds
          Length = 624

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 430 gagctgaagatggaaattga 449
           ||||||||||||||||||||
Sbjct: 268 gagctgaagatggaaattga 287
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>gb|AC105600.5| Rattus norvegicus 4 BAC CH230-209E1 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 218874

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 104   gccatgttttcctctccagg 123
             ||||||||||||||||||||
Sbjct: 15779 gccatgttttcctctccagg 15798
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>emb|CR384099.6| Zebrafish DNA sequence from clone DKEY-266I18 in linkage group 24,
              complete sequence
          Length = 121857

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 148    tttgattgtgtaaacattct 167
              ||||||||||||||||||||
Sbjct: 120266 tttgattgtgtaaacattct 120247
to top
>gb|AC003001.1| Homo sapiens chromosome X, clone HRPC928E24, complete sequence
          Length = 101981

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 134   aaccacaatggatttttgat 153
             ||||||||||||||||||||
Sbjct: 94493 aaccacaatggatttttgat 94512
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>gb|AC012048.11| Homo sapiens chromosome 10 clone RP11-43N22, complete sequence
          Length = 178965

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 522   ccaggcagctgttgaacaag 541
             ||||||||||||||||||||
Sbjct: 72255 ccaggcagctgttgaacaag 72274
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>dbj|AK138438.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length
           enriched library, clone:A230108E16 product:hypothetical
           Immunoglobulin-like containing protein, full insert
           sequence
          Length = 2614

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 388 aagaagagggagttggagaagcaa 411
           ||||||||| ||||||||||||||
Sbjct: 406 aagaagaggaagttggagaagcaa 429
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>dbj|AK158265.1| Mus musculus adult inner ear cDNA, RIKEN full-length enriched
            library, clone:F930049D15 product:hypothetical
            Immunoglobulin-like/Immunoglobulin C-2
            type/Immunoglobulin subtype/Ig-like domain profile
            containing protein, full insert sequence
          Length = 2445

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 388  aagaagagggagttggagaagcaa 411
            ||||||||| ||||||||||||||
Sbjct: 1120 aagaagaggaagttggagaagcaa 1143
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>emb|BX649555.9| Zebrafish DNA sequence from clone CH211-117C13 in linkage group 16,
              complete sequence
          Length = 163314

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 545    aaaaggatgctgatgacatt 564
              ||||||||||||||||||||
Sbjct: 139694 aaaaggatgctgatgacatt 139675
to top
>dbj|AK013637.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length
           enriched library, clone:2900042E01 product:hypothetical
           Immunoglobulin and major histocompatibility complex
           domain/Immunoglobulin C-2 type/Immunoglobulin subtype
           containing protein, full insert sequence
          Length = 1613

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 388 aagaagagggagttggagaagcaa 411
           ||||||||| ||||||||||||||
Sbjct: 882 aagaagaggaagttggagaagcaa 905
to top
>gb|AC020905.9| Homo sapiens chromosome 19 clone CTB-70G10, complete sequence
          Length = 141513

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 389   agaagagggagttggagaag 408
             ||||||||||||||||||||
Sbjct: 90783 agaagagggagttggagaag 90764
to top
>dbj|AK081154.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length
           enriched library, clone:B930093P06 product:hypothetical
           Immunoglobulin-like/Immunoglobulin C-2
           type/Immunoglobulin subtype/Ig-like domain profile
           containing protein, full insert sequence
          Length = 1445

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 388 aagaagagggagttggagaagcaa 411
           ||||||||| ||||||||||||||
Sbjct: 798 aagaagaggaagttggagaagcaa 821
to top
>ref|NM_073734.1| Caenorhabditis elegans T28H10.1 (T28H10.1) mRNA, complete cds
          Length = 900

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 133 caaccacaatggatttttga 152
           ||||||||||||||||||||
Sbjct: 646 caaccacaatggatttttga 665
to top
>emb|BX640536.6| Zebrafish DNA sequence from clone CH211-191A6 in linkage group 5,
             complete sequence
          Length = 137923

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 159   aaacattctcagagtaattc 178
             ||||||||||||||||||||
Sbjct: 20531 aaacattctcagagtaattc 20512
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>gb|AC155241.2| Mus musculus BAC clone RP24-485P18 from chromosome 12, complete
             sequence
          Length = 144320

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 403   gagaagcaagagaagaaata 422
             ||||||||||||||||||||
Sbjct: 86080 gagaagcaagagaagaaata 86061
to top
>gb|AC021068.17|AC021068 Homo sapiens 3 BAC RP11-48O22 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 159259

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 383   ctaaaaagaagagggagttggaga 406
             ||||||||| ||||||||||||||
Sbjct: 73740 ctaaaaagatgagggagttggaga 73763
to top
>gb|AC016138.8| Homo sapiens 3 BAC RP11-91B3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 179680

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 322   ccaggtgatgaagatctggg 341
             ||||||||||||||||||||
Sbjct: 84491 ccaggtgatgaagatctggg 84472
to top
>dbj|AB025623.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MJM18
          Length = 16203

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 430  gagctgaagatggaaattga 449
            ||||||||||||||||||||
Sbjct: 4236 gagctgaagatggaaattga 4217
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>dbj|AP004241.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-222B11, complete
              sequence
          Length = 152771

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 146    tttttgattgtgtaaacatt 165
              ||||||||||||||||||||
Sbjct: 109173 tttttgattgtgtaaacatt 109154
to top
>gb|AC147645.3| Gallus gallus BAC clone CH261-121C23 from chromosome unknown, complete
              sequence
          Length = 158903

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 526    gcagctgttgaacaagctga 545
              ||||||||||||||||||||
Sbjct: 101691 gcagctgttgaacaagctga 101672
to top
>emb|Z81486.1|CEC53A5 Caenorhabditis elegans Cosmid C53A5, complete sequence
          Length = 46480

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 145   atttttgattgtgtaaacat 164
             ||||||||||||||||||||
Sbjct: 45663 atttttgattgtgtaaacat 45682
to top
>dbj|AP006359.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT36C13, TM0100c,
             complete sequence
          Length = 25407

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 528   agctgttgaacaagctgaaa 547
             ||||||||||||||||||||
Sbjct: 24932 agctgttgaacaagctgaaa 24951
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>dbj|AP006357.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT36C13, TM0100a,
            complete sequence
          Length = 79575

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 528  agctgttgaacaagctgaaa 547
            ||||||||||||||||||||
Sbjct: 6679 agctgttgaacaagctgaaa 6660


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,829,364
Number of Sequences: 3902068
Number of extensions: 5829364
Number of successful extensions: 109634
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 109310
Number of HSP's gapped (non-prelim): 319
length of query: 577
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 554
effective length of database: 17,143,297,704
effective search space: 9497386928016
effective search space used: 9497386928016
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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