ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags4a08 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_476648.1| Oryza sativa (japonica cultivar-group), mRNA Length = 730 Score = 438 bits (221), Expect = e-120 Identities = 341/381 (89%) Strand = Plus / Plus Query: 118 ccggttcttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtca 177 ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 133 ccggttcttggggagcccatggatctgatgactgctctgcagcttgtgatgaagaagtca 192 Query: 178 agtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcgattgagaagcat 237 |||||||||||||| ||||| ||||| |||||||| ||||| || || || ||||||||| Sbjct: 193 agtgctcatgatgggcttgtgaagggtctccgtgaggctgccaaggccatcgagaagcat 252 Query: 238 gctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtc 297 ||||||||| | ||||||||||||||||| |||||||| ||||||||||| ||| | || Sbjct: 253 gctgctcagctttgtgtgcttgctgaggactgcgaccaacctgattatgtcaagttggtt 312 Query: 298 aaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactctt 357 ||||| || ||||||||||||||||||||| | || |||||||||||||| || |||||| Sbjct: 313 aaggctctgtgtgctgagcacaacgttcaccttgttaccgtgcctagtgctaagactctt 372 Query: 358 ggcgagtgggctgggctttgcaagattgactctgagggcaaggcaagaaaggtggtgggc 417 ||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 373 ggcgagtgggcagggctttgcaagattgactctgagggcaaggcaaggaaggttgtgggc 432 Query: 418 tgctcatgtgtcgttgtgaaggactatggtgaagattcggagggtcttcacatcgtgcag 477 ||||| || |||||||| ||||||||||||||||| || ||||| ||| |||| |||||| Sbjct: 433 tgctcctgcgtcgttgtcaaggactatggtgaagagtctgagggccttaacatagtgcag 492 Query: 478 gaatacgtcaagtcgcactag 498 || || ||||| ||||||||| Sbjct: 493 gactatgtcaaatcgcactag 513
>dbj|AK121635.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051C16, full insert sequence Length = 734 Score = 438 bits (221), Expect = e-120 Identities = 341/381 (89%) Strand = Plus / Plus Query: 118 ccggttcttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtca 177 ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 137 ccggttcttggggagcccatggatctgatgactgctctgcagcttgtgatgaagaagtca 196 Query: 178 agtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcgattgagaagcat 237 |||||||||||||| ||||| ||||| |||||||| ||||| || || || ||||||||| Sbjct: 197 agtgctcatgatgggcttgtgaagggtctccgtgaggctgccaaggccatcgagaagcat 256 Query: 238 gctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtc 297 ||||||||| | ||||||||||||||||| |||||||| ||||||||||| ||| | || Sbjct: 257 gctgctcagctttgtgtgcttgctgaggactgcgaccaacctgattatgtcaagttggtt 316 Query: 298 aaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactctt 357 ||||| || ||||||||||||||||||||| | || |||||||||||||| || |||||| Sbjct: 317 aaggctctgtgtgctgagcacaacgttcaccttgttaccgtgcctagtgctaagactctt 376 Query: 358 ggcgagtgggctgggctttgcaagattgactctgagggcaaggcaagaaaggtggtgggc 417 ||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 377 ggcgagtgggcagggctttgcaagattgactctgagggcaaggcaaggaaggttgtgggc 436 Query: 418 tgctcatgtgtcgttgtgaaggactatggtgaagattcggagggtcttcacatcgtgcag 477 ||||| || |||||||| ||||||||||||||||| || ||||| ||| |||| |||||| Sbjct: 437 tgctcctgcgtcgttgtcaaggactatggtgaagagtctgagggccttaacatagtgcag 496 Query: 478 gaatacgtcaagtcgcactag 498 || || ||||| ||||||||| Sbjct: 497 gactatgtcaaatcgcactag 517
>dbj|AK058680.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-A01, full insert sequence Length = 730 Score = 438 bits (221), Expect = e-120 Identities = 341/381 (89%) Strand = Plus / Plus Query: 118 ccggttcttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtca 177 ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 133 ccggttcttggggagcccatggatctgatgactgctctgcagcttgtgatgaagaagtca 192 Query: 178 agtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcgattgagaagcat 237 |||||||||||||| ||||| ||||| |||||||| ||||| || || || ||||||||| Sbjct: 193 agtgctcatgatgggcttgtgaagggtctccgtgaggctgccaaggccatcgagaagcat 252 Query: 238 gctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtc 297 ||||||||| | ||||||||||||||||| |||||||| ||||||||||| ||| | || Sbjct: 253 gctgctcagctttgtgtgcttgctgaggactgcgaccaacctgattatgtcaagttggtt 312 Query: 298 aaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactctt 357 ||||| || ||||||||||||||||||||| | || |||||||||||||| || |||||| Sbjct: 313 aaggctctgtgtgctgagcacaacgttcaccttgttaccgtgcctagtgctaagactctt 372 Query: 358 ggcgagtgggctgggctttgcaagattgactctgagggcaaggcaagaaaggtggtgggc 417 ||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 373 ggcgagtgggcagggctttgcaagattgactctgagggcaaggcaaggaaggttgtgggc 432 Query: 418 tgctcatgtgtcgttgtgaaggactatggtgaagattcggagggtcttcacatcgtgcag 477 ||||| || |||||||| ||||||||||||||||| || ||||| ||| |||| |||||| Sbjct: 433 tgctcctgcgtcgttgtcaaggactatggtgaagagtctgagggccttaacatagtgcag 492 Query: 478 gaatacgtcaagtcgcactag 498 || || ||||| ||||||||| Sbjct: 493 gactatgtcaaatcgcactag 513
>gb|AY109069.1| Zea mays PCO128954 mRNA sequence Length = 755 Score = 377 bits (190), Expect = e-101 Identities = 331/378 (87%) Strand = Plus / Plus Query: 121 gttcttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtcaagt 180 |||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 174 gttcttggagagccaatggacttgatgactgcgctgcagctggtgatgaagaagtcaagt 233 Query: 181 gctcatgatggccttgtcaagggactccgtgaagctgcaaaagcgattgagaagcatgct 240 ||||||||||| ||||| ||||| || || || ||||| || || ||||||||||||||| Sbjct: 234 gctcatgatggacttgtgaagggtcttcgcgaggctgccaaggccattgagaagcatgct 293 Query: 241 gctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtcaag 300 |||||| | || || ||||||||||| || |||||||| |||||||| ||||| || ||| Sbjct: 294 gctcagctttgcgttcttgctgaggactgtgaccagccagattatgtcaagctggtgaag 353 Query: 301 gcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactcttggc 360 || ||||||||||| ||||| |||||| | ||||| || ||| ||| || ||||||||| Sbjct: 354 gcgctctgtgctgaacacaatgttcaccttgtcactgttcctgctgctaagactcttggc 413 Query: 361 gagtgggctgggctttgcaagattgactctgagggcaaggcaagaaaggtggtgggctgc 420 ||||||||||||||||||||||||||||| |||||||||||||| ||||| || |||||| Sbjct: 414 gagtgggctgggctttgcaagattgactccgagggcaaggcaaggaaggttgtaggctgc 473 Query: 421 tcatgtgtcgttgtgaaggactatggtgaagattcggagggtcttcacatcgtgcaggaa 480 || ||||||||||| |||||||| |||||||| || ||||| ||| |||| |||||||| Sbjct: 474 tcctgtgtcgttgtcaaggactacggtgaagaatctgagggccttaacatagtgcaggag 533 Query: 481 tacgtcaagtcgcactag 498 || ||||||||||||||| Sbjct: 534 tatgtcaagtcgcactag 551
>gb|AF067732.1|AF067732 Hordeum vulgare ribosomal protein S12 (rps12) mRNA, complete cds Length = 760 Score = 377 bits (190), Expect = e-101 Identities = 325/370 (87%) Strand = Plus / Plus Query: 122 ttcttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtcaagtg 181 ||||||| ||||| |||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 154 ttcttggtgagccaatggacttgatgactgctctacagcttgtcatgaagaagtcaagtg 213 Query: 182 ctcatgatggccttgtcaagggactccgtgaagctgcaaaagcgattgagaagcatgctg 241 |||||||||||||||| ||||| |||||||| ||||| || | |||||||||||||||| Sbjct: 214 ctcatgatggccttgtgaaggggctccgtgaggctgccaagtccattgagaagcatgctg 273 Query: 242 ctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtcaagg 301 ||||| | |||||||| ||||||||||| |||||||||||||| ||||||||||| |||| Sbjct: 274 ctcagctttgtgtgctggctgaggattgtgaccagcctgattacgtgaagcttgttaagg 333 Query: 302 cactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactcttggcg 361 |||| || ||||||||||| |||||| |||| || ||||| ||||| |||||||| || | Sbjct: 334 cactatgcgctgagcacaatgttcacctggttactgtgccaagtgctaaaactctcggag 393 Query: 362 agtgggctgggctttgcaagattgactctgagggcaaggcaagaaaggtggtgggctgct 421 ||||||| |||||||||||||| ||| |||||||||||||||| ||||| || ||||||| Sbjct: 394 agtgggcagggctttgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgct 453 Query: 422 catgtgtcgttgtgaaggactatggtgaagattcggagggtcttcacatcgtgcaggaat 481 | || | ||||| ||||||||||||||||| || ||||| ||| ||||||||||| | | Sbjct: 454 cttgcattgttgtcaaggactatggtgaagaatccgagggccttaacatcgtgcagcagt 513 Query: 482 acgtcaagtc 491 | |||||||| Sbjct: 514 atgtcaagtc 523
>ref|XM_477173.1| Oryza sativa (japonica cultivar-group), mRNA Length = 751 Score = 375 bits (189), Expect = e-100 Identities = 333/381 (87%) Strand = Plus / Plus Query: 118 ccggttcttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtca 177 ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 156 ccggttcttggagagccgatggacctgatgactgctctgcagcttgtgatgaagaagtca 215 Query: 178 agtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcgattgagaagcat 237 || ||||||||||| || || ||||| |||||||| || || || || |||||||||||| Sbjct: 216 agcgctcatgatgggctcgtgaaggggctccgtgaggcggccaaggccattgagaagcat 275 Query: 238 gctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtc 297 || |||||| | || |||||||||||||| || ||||||||||||||||| ||| | ||| Sbjct: 276 gccgctcagctttgcgtgcttgctgaggactgtgaccagcctgattatgtcaagttggtc 335 Query: 298 aaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactctt 357 ||||||||||| ||||||||||| |||||| | || |||||||||||||| ||||||||| Sbjct: 336 aaggcactctgcgctgagcacaatgttcacctcgttaccgtgcctagtgctaaaactctt 395 Query: 358 ggcgagtgggctgggctttgcaagattgactctgagggcaaggcaagaaaggtggtgggc 417 ||||||||||| ||||||||||||||||| |||||||||||||| || ||||| || ||| Sbjct: 396 ggcgagtgggcagggctttgcaagattgattctgagggcaaggcgaggaaggtcgtaggc 455 Query: 418 tgctcatgtgtcgttgtgaaggactatggtgaagattcggagggtcttcacatcgtgcag 477 ||||| || |||||||| ||||||| |||||||| || ||||| || |||| || ||| Sbjct: 456 tgctcctgcgtcgttgtcaaggacttcggtgaagagtcagagggcctcaacatagtccag 515 Query: 478 gaatacgtcaagtcgcactag 498 || || |||||||| |||||| Sbjct: 516 gactatgtcaagtcccactag 536
>dbj|AK121720.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033080B09, full insert sequence Length = 754 Score = 375 bits (189), Expect = e-100 Identities = 333/381 (87%) Strand = Plus / Plus Query: 118 ccggttcttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtca 177 ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 153 ccggttcttggagagccgatggacctgatgactgctctgcagcttgtgatgaagaagtca 212 Query: 178 agtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcgattgagaagcat 237 || ||||||||||| || || ||||| |||||||| || || || || |||||||||||| Sbjct: 213 agcgctcatgatgggctcgtgaaggggctccgtgaggcggccaaggccattgagaagcat 272 Query: 238 gctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtc 297 || |||||| | || |||||||||||||| || ||||||||||||||||| ||| | ||| Sbjct: 273 gccgctcagctttgcgtgcttgctgaggactgtgaccagcctgattatgtcaagttggtc 332 Query: 298 aaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactctt 357 ||||||||||| ||||||||||| |||||| | || |||||||||||||| ||||||||| Sbjct: 333 aaggcactctgcgctgagcacaatgttcacctcgttaccgtgcctagtgctaaaactctt 392 Query: 358 ggcgagtgggctgggctttgcaagattgactctgagggcaaggcaagaaaggtggtgggc 417 ||||||||||| ||||||||||||||||| |||||||||||||| || ||||| || ||| Sbjct: 393 ggcgagtgggcagggctttgcaagattgattctgagggcaaggcgaggaaggtcgtaggc 452 Query: 418 tgctcatgtgtcgttgtgaaggactatggtgaagattcggagggtcttcacatcgtgcag 477 ||||| || |||||||| ||||||| |||||||| || ||||| || |||| || ||| Sbjct: 453 tgctcctgcgtcgttgtcaaggacttcggtgaagagtcagagggcctcaacatagtccag 512 Query: 478 gaatacgtcaagtcgcactag 498 || || |||||||| |||||| Sbjct: 513 gactatgtcaagtcccactag 533
>dbj|AK059090.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-B10, full insert sequence Length = 751 Score = 375 bits (189), Expect = e-100 Identities = 333/381 (87%) Strand = Plus / Plus Query: 118 ccggttcttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtca 177 ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 156 ccggttcttggagagccgatggacctgatgactgctctgcagcttgtgatgaagaagtca 215 Query: 178 agtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcgattgagaagcat 237 || ||||||||||| || || ||||| |||||||| || || || || |||||||||||| Sbjct: 216 agcgctcatgatgggctcgtgaaggggctccgtgaggcggccaaggccattgagaagcat 275 Query: 238 gctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtc 297 || |||||| | || |||||||||||||| || ||||||||||||||||| ||| | ||| Sbjct: 276 gccgctcagctttgcgtgcttgctgaggactgtgaccagcctgattatgtcaagttggtc 335 Query: 298 aaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactctt 357 ||||||||||| ||||||||||| |||||| | || |||||||||||||| ||||||||| Sbjct: 336 aaggcactctgcgctgagcacaatgttcacctcgttaccgtgcctagtgctaaaactctt 395 Query: 358 ggcgagtgggctgggctttgcaagattgactctgagggcaaggcaagaaaggtggtgggc 417 ||||||||||| ||||||||||||||||| |||||||||||||| || ||||| || ||| Sbjct: 396 ggcgagtgggcagggctttgcaagattgattctgagggcaaggcgaggaaggtcgtaggc 455 Query: 418 tgctcatgtgtcgttgtgaaggactatggtgaagattcggagggtcttcacatcgtgcag 477 ||||| || |||||||| ||||||| |||||||| || ||||| || |||| || ||| Sbjct: 456 tgctcctgcgtcgttgtcaaggacttcggtgaagagtcagagggcctcaacatagtccag 515 Query: 478 gaatacgtcaagtcgcactag 498 || || |||||||| |||||| Sbjct: 516 gactatgtcaagtcccactag 536
>gb|BT018309.1| Zea mays clone EL01T0206H08.c mRNA sequence Length = 608 Score = 361 bits (182), Expect = 2e-96 Identities = 344/398 (86%) Strand = Plus / Plus Query: 101 cagttgcggccccaattccggttcttggagagcccatggacttgatgactgctctgcagc 160 |||||| |||||| | ||||| ||||| ||||| ||||||||||||||||||||||||| Sbjct: 104 cagttgaggcccctaccccggtccttggggagccgatggacttgatgactgctctgcagc 163 Query: 161 ttgtgatgaagaagtcaagtgctcatgatggccttgtcaagggactccgtgaagctgcaa 220 |||| ||||||||||| ||||||||||||||||||| ||||| || ||||| ||||| | Sbjct: 164 ttgtcatgaagaagtcgggtgctcatgatggccttgttaagggtcttcgtgaggctgcca 223 Query: 221 aagcgattgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgaccagcctg 280 |||| ||||||||||||||||||||| | || |||||||| ||||| || |||||||||| Sbjct: 224 aagcaattgagaagcatgctgctcagctttgcgtgcttgcggaggactgtgaccagcctg 283 Query: 281 attatgtgaagcttgtcaaggcactctgtgctgagcacaacgttcacttggtcaccgtgc 340 ||||||| ||||| || ||||| || || ||||||||||||||||| |||| || |||| Sbjct: 284 attatgtcaagctggtgaaggctctttgctctgagcacaacgttcacctggttactgtgc 343 Query: 341 ctagtgccaaaactcttggcgagtgggctgggctttgcaagattgactctgagggcaagg 400 |||| || |||||||||||||| ||| ||||||||||||||||||| ||||||||||||| Sbjct: 344 ctagcgctaaaactcttggcgaatggtctgggctttgcaagattgattctgagggcaagg 403 Query: 401 caagaaaggtggtgggctgctcatgtgtcgttgtgaaggactatggtgaagattcggagg 460 | || ||||| ||||| ||||| ||||| || || ||||||||||| ||||| || |||| Sbjct: 404 cgaggaaggttgtgggttgctcctgtgttgtcgtcaaggactatggcgaagaatctgagg 463 Query: 461 gtcttcacatcgtgcaggaatacgtcaagtcgcactag 498 | ||| |||| || ||||| ||||||||||| |||||| Sbjct: 464 gccttaacatagttcaggagtacgtcaagtcacactag 501
>gb|AY104036.1| Zea mays PCO068483 mRNA sequence Length = 845 Score = 359 bits (181), Expect = 7e-96 Identities = 331/381 (86%) Strand = Plus / Plus Query: 118 ccggttcttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtca 177 ||||||||||| || || |||||| |||||||||| |||||||| || |||||||||||| Sbjct: 201 ccggttcttggggaaccgatggacctgatgactgccctgcagctcgtcatgaagaagtca 260 Query: 178 agtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcgattgagaagcat 237 ||||||||||||||||||| ||||| || ||||| ||||| ||||| || ||||||||| Sbjct: 261 ggtgctcatgatggccttgtgaagggtcttcgtgaggctgccaaagccatcgagaagcat 320 Query: 238 gctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtc 297 || |||||| |||| |||||||| ||||| |||||||||||||||||||| ||||| || Sbjct: 321 gccgctcagctctgcgtgcttgccgaggactgcgaccagcctgattatgtcaagctggtg 380 Query: 298 aaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactctt 357 ||||| ||||| ||||||||||| || ||| |||| || |||||||| |||||||||||| Sbjct: 381 aaggctctctgcgctgagcacaatgtccacctggttactgtgcctagcgccaaaactctt 440 Query: 358 ggcgagtgggctgggctttgcaagattgactctgagggcaaggcaagaaaggtggtgggc 417 || ||||||||||||||||||||||| ||||||||||||||||| || ||||| || ||| Sbjct: 441 ggagagtgggctgggctttgcaagatcgactctgagggcaaggcgaggaaggttgtaggc 500 Query: 418 tgctcatgtgtcgttgtgaaggactatggtgaagattcggagggtcttcacatcgtgcag 477 ||||| ||||| ||||| |||||||| || ||||| || || || ||| |||| |||||| Sbjct: 501 tgctcctgtgttgttgtcaaggactacggcgaagaatctgaaggccttaacatagtgcag 560 Query: 478 gaatacgtcaagtcgcactag 498 || |||||||| ||||||||| Sbjct: 561 gagtacgtcaaatcgcactag 581
>gb|BT017581.1| Zea mays clone EL01N0429E05.c mRNA sequence Length = 747 Score = 335 bits (169), Expect = 1e-88 Identities = 328/381 (86%) Strand = Plus / Plus Query: 118 ccggttcttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtca 177 ||||||||||| || || |||||| |||||||||| |||||||| || |||||||||||| Sbjct: 108 ccggttcttggggaaccgatggacctgatgactgccctgcagctcgtcatgaagaagtca 167 Query: 178 agtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcgattgagaagcat 237 | | | ||||||||||||| ||||| || ||||| ||||| ||||| || ||||||||| Sbjct: 168 gggggtgatgatggccttgtgaagggtcttcgtgaggctgccaaagccatcgagaagcat 227 Query: 238 gctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtc 297 || |||||| |||| |||||||| ||||| |||||||||||||||||||| ||||| || Sbjct: 228 gccgctcagctctgcgtgcttgccgaggactgcgaccagcctgattatgtcaagctggtg 287 Query: 298 aaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactctt 357 ||||| ||||| ||||||||||| || ||| |||| || |||||||| |||||||||||| Sbjct: 288 aaggctctctgcgctgagcacaatgtccacctggttactgtgcctagcgccaaaactctt 347 Query: 358 ggcgagtgggctgggctttgcaagattgactctgagggcaaggcaagaaaggtggtgggc 417 || ||||||||||||||||||||||| ||||||||||||||||| || ||||| || ||| Sbjct: 348 ggagagtgggctgggctttgcaagatcgactctgagggcaaggcgaggaaggttgtaggc 407 Query: 418 tgctcatgtgtcgttgtgaaggactatggtgaagattcggagggtcttcacatcgtgcag 477 ||||| ||||| ||||| |||||||| || ||||| || || || ||| |||| |||||| Sbjct: 408 tgctcctgtgttgttgtcaaggactacggcgaagaatctgaaggccttaacatagtgcag 467 Query: 478 gaatacgtcaagtcgcactag 498 || |||||||| ||||||||| Sbjct: 468 gagtacgtcaaatcgcactag 488
>gb|BT017926.1| Zea mays clone EL01N0519G01.c mRNA sequence Length = 580 Score = 307 bits (155), Expect = 2e-80 Identities = 296/343 (86%) Strand = Plus / Plus Query: 156 gcagcttgtgatgaagaagtcaagtgctcatgatggccttgtcaagggactccgtgaagc 215 |||||| |||||||||||||||||||||||||| || ||||| ||||| |||||||| || Sbjct: 9 gcagctcgtgatgaagaagtcaagtgctcatgacggacttgtgaagggtctccgtgaggc 68 Query: 216 tgcaaaagcgattgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgacca 275 ||| || || || |||||||| || |||||| | || |||||||||||||| || ||||| Sbjct: 69 tgccaaggccatcgagaagcacgccgctcagctttgcgtgcttgctgaggactgtgacca 128 Query: 276 gcctgattatgtgaagcttgtcaaggcactctgtgctgagcacaacgttcacttggtcac 335 ||| ||||| || ||||| || ||||||||||| ||||||||||| |||||| ||||||| Sbjct: 129 gccagattacgtcaagctggtgaaggcactctgcgctgagcacaatgttcacctggtcac 188 Query: 336 cgtgcctagtgccaaaactcttggcgagtgggctgggctttgcaagattgactctgaggg 395 || ||| || || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 189 tgttcctgccgctaagactcttggcgagtgggctgggctttgcaagattgactctgaggg 248 Query: 396 caaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaaggactatggtgaagattc 455 ||||||||| ||||| || |||||||| || ||||| || |||||||| |||||||| || Sbjct: 249 caaggcaaggaaggttgtaggctgctcctgcgtcgtcgtcaaggactacggtgaagaatc 308 Query: 456 ggagggtcttcacatcgtgcaggaatacgtcaagtcgcactag 498 ||||| ||| |||| |||||||| || ||||||||||||||| Sbjct: 309 tgagggccttaacatagtgcaggagtatgtcaagtcgcactag 351
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 291 bits (147), Expect = 1e-75 Identities = 225/251 (89%) Strand = Plus / Plus Query: 118 ccggttcttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtca 177 ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 2647144 ccggttcttggggagcccatggatctgatgactgctctgcagcttgtgatgaagaagtca 2647203 Query: 178 agtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcgattgagaagcat 237 |||||||||||||| ||||| ||||| |||||||| ||||| || || || ||||||||| Sbjct: 2647204 agtgctcatgatgggcttgtgaagggtctccgtgaggctgccaaggccatcgagaagcat 2647263 Query: 238 gctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtc 297 ||||||||| | ||||||||||||||||| |||||||| ||||||||||| ||| | || Sbjct: 2647264 gctgctcagctttgtgtgcttgctgaggactgcgaccaacctgattatgtcaagttggtt 2647323 Query: 298 aaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactctt 357 ||||| || ||||||||||||||||||||| | || |||||||||||||| || |||||| Sbjct: 2647324 aaggctctgtgtgctgagcacaacgttcaccttgttaccgtgcctagtgctaagactctt 2647383 Query: 358 ggcgagtgggc 368 ||||||||||| Sbjct: 2647384 ggcgagtgggc 2647394 Score = 283 bits (143), Expect = 3e-73 Identities = 224/251 (89%) Strand = Plus / Minus Query: 118 ccggttcttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtca 177 ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 7266262 ccggttcttggagagccgatggacctgatgactgctctgcagcttgtgatgaagaagtca 7266203 Query: 178 agtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcgattgagaagcat 237 || ||||||||||| || || ||||| |||||||| || || || || |||||||||||| Sbjct: 7266202 agcgctcatgatgggctcgtgaaggggctccgtgaggcggccaaggccattgagaagcat 7266143 Query: 238 gctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtc 297 || |||||| | || |||||||||||||| || ||||||||||||||||| ||| | ||| Sbjct: 7266142 gccgctcagctttgcgtgcttgctgaggactgtgaccagcctgattatgtcaagttggtc 7266083 Query: 298 aaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactctt 357 ||||||||||| ||||||||||| |||||| | || |||||||||||||| ||||||||| Sbjct: 7266082 aaggcactctgcgctgagcacaatgttcacctcgttaccgtgcctagtgctaaaactctt 7266023 Query: 358 ggcgagtgggc 368 ||||||||||| Sbjct: 7266022 ggcgagtgggc 7266012 Score = 95.6 bits (48), Expect = 2e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 372 gctttgcaagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgt 431 ||||||||||||||||||||||||||||||||| ||||| ||||||||||| || ||||| Sbjct: 2648042 gctttgcaagattgactctgagggcaaggcaaggaaggttgtgggctgctcctgcgtcgt 2648101 Query: 432 tgtgaagg 439 ||| |||| Sbjct: 2648102 tgtcaagg 2648109 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 372 gctttgcaagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgt 431 ||||||||||||||| |||||||||||||| || ||||| || |||||||| || ||||| Sbjct: 7265747 gctttgcaagattgattctgagggcaaggcgaggaaggtcgtaggctgctcctgcgtcgt 7265688 Query: 432 tgtgaagg 439 ||| |||| Sbjct: 7265687 tgtcaagg 7265680 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 437 aggactatggtgaagattcggagggtcttcacatcgtgcaggaatacgtcaagtcgcact 496 |||||||||||||||| || ||||| ||| |||| |||||||| || ||||| ||||||| Sbjct: 2648197 aggactatggtgaagagtctgagggccttaacatagtgcaggactatgtcaaatcgcact 2648256 Query: 497 ag 498 || Sbjct: 2648257 ag 2648258
>dbj|AP003703.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1027_G06 Length = 121885 Score = 291 bits (147), Expect = 1e-75 Identities = 225/251 (89%) Strand = Plus / Plus Query: 118 ccggttcttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtca 177 ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 72862 ccggttcttggggagcccatggatctgatgactgctctgcagcttgtgatgaagaagtca 72921 Query: 178 agtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcgattgagaagcat 237 |||||||||||||| ||||| ||||| |||||||| ||||| || || || ||||||||| Sbjct: 72922 agtgctcatgatgggcttgtgaagggtctccgtgaggctgccaaggccatcgagaagcat 72981 Query: 238 gctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtc 297 ||||||||| | ||||||||||||||||| |||||||| ||||||||||| ||| | || Sbjct: 72982 gctgctcagctttgtgtgcttgctgaggactgcgaccaacctgattatgtcaagttggtt 73041 Query: 298 aaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactctt 357 ||||| || ||||||||||||||||||||| | || |||||||||||||| || |||||| Sbjct: 73042 aaggctctgtgtgctgagcacaacgttcaccttgttaccgtgcctagtgctaagactctt 73101 Query: 358 ggcgagtgggc 368 ||||||||||| Sbjct: 73102 ggcgagtgggc 73112 Score = 95.6 bits (48), Expect = 2e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 372 gctttgcaagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgt 431 ||||||||||||||||||||||||||||||||| ||||| ||||||||||| || ||||| Sbjct: 73760 gctttgcaagattgactctgagggcaaggcaaggaaggttgtgggctgctcctgcgtcgt 73819 Query: 432 tgtgaagg 439 ||| |||| Sbjct: 73820 tgtcaagg 73827 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 437 aggactatggtgaagattcggagggtcttcacatcgtgcaggaatacgtcaagtcgcact 496 |||||||||||||||| || ||||| ||| |||| |||||||| || ||||| ||||||| Sbjct: 73915 aggactatggtgaagagtctgagggccttaacatagtgcaggactatgtcaaatcgcact 73974 Query: 497 ag 498 || Sbjct: 73975 ag 73976
>ref|XM_477174.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2015 Score = 283 bits (143), Expect = 3e-73 Identities = 224/251 (89%) Strand = Plus / Plus Query: 118 ccggttcttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtca 177 ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1085 ccggttcttggagagccgatggacctgatgactgctctgcagcttgtgatgaagaagtca 1144 Query: 178 agtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcgattgagaagcat 237 || ||||||||||| || || ||||| |||||||| || || || || |||||||||||| Sbjct: 1145 agcgctcatgatgggctcgtgaaggggctccgtgaggcggccaaggccattgagaagcat 1204 Query: 238 gctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtc 297 || |||||| | || |||||||||||||| || ||||||||||||||||| ||| | ||| Sbjct: 1205 gccgctcagctttgcgtgcttgctgaggactgtgaccagcctgattatgtcaagttggtc 1264 Query: 298 aaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactctt 357 ||||||||||| ||||||||||| |||||| | || |||||||||||||| ||||||||| Sbjct: 1265 aaggcactctgcgctgagcacaatgttcacctcgttaccgtgcctagtgctaaaactctt 1324 Query: 358 ggcgagtgggc 368 ||||||||||| Sbjct: 1325 ggcgagtgggc 1335 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 372 gctttgcaagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgt 431 ||||||||||||||| |||||||||||||| || ||||| || |||||||| || ||||| Sbjct: 1600 gctttgcaagattgattctgagggcaaggcgaggaaggtcgtaggctgctcctgcgtcgt 1659 Query: 432 tgtgaagg 439 ||| |||| Sbjct: 1660 tgtcaagg 1667
>dbj|AP005764.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0016A21 Length = 144076 Score = 283 bits (143), Expect = 3e-73 Identities = 224/251 (89%) Strand = Plus / Minus Query: 118 ccggttcttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtca 177 ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 106746 ccggttcttggagagccgatggacctgatgactgctctgcagcttgtgatgaagaagtca 106687 Query: 178 agtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcgattgagaagcat 237 || ||||||||||| || || ||||| |||||||| || || || || |||||||||||| Sbjct: 106686 agcgctcatgatgggctcgtgaaggggctccgtgaggcggccaaggccattgagaagcat 106627 Query: 238 gctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtc 297 || |||||| | || |||||||||||||| || ||||||||||||||||| ||| | ||| Sbjct: 106626 gccgctcagctttgcgtgcttgctgaggactgtgaccagcctgattatgtcaagttggtc 106567 Query: 298 aaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactctt 357 ||||||||||| ||||||||||| |||||| | || |||||||||||||| ||||||||| Sbjct: 106566 aaggcactctgcgctgagcacaatgttcacctcgttaccgtgcctagtgctaaaactctt 106507 Query: 358 ggcgagtgggc 368 ||||||||||| Sbjct: 106506 ggcgagtgggc 106496 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 372 gctttgcaagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgt 431 ||||||||||||||| |||||||||||||| || ||||| || |||||||| || ||||| Sbjct: 106231 gctttgcaagattgattctgagggcaaggcgaggaaggtcgtaggctgctcctgcgtcgt 106172 Query: 432 tgtgaagg 439 ||| |||| Sbjct: 106171 tgtcaagg 106164
>dbj|AK071026.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078K20, full insert sequence Length = 2015 Score = 283 bits (143), Expect = 3e-73 Identities = 224/251 (89%) Strand = Plus / Plus Query: 118 ccggttcttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtca 177 ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1085 ccggttcttggagagccgatggacctgatgactgctctgcagcttgtgatgaagaagtca 1144 Query: 178 agtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcgattgagaagcat 237 || ||||||||||| || || ||||| |||||||| || || || || |||||||||||| Sbjct: 1145 agcgctcatgatgggctcgtgaaggggctccgtgaggcggccaaggccattgagaagcat 1204 Query: 238 gctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtc 297 || |||||| | || |||||||||||||| || ||||||||||||||||| ||| | ||| Sbjct: 1205 gccgctcagctttgcgtgcttgctgaggactgtgaccagcctgattatgtcaagttggtc 1264 Query: 298 aaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactctt 357 ||||||||||| ||||||||||| |||||| | || |||||||||||||| ||||||||| Sbjct: 1265 aaggcactctgcgctgagcacaatgttcacctcgttaccgtgcctagtgctaaaactctt 1324 Query: 358 ggcgagtgggc 368 ||||||||||| Sbjct: 1325 ggcgagtgggc 1335 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 372 gctttgcaagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgt 431 ||||||||||||||| |||||||||||||| || ||||| || |||||||| || ||||| Sbjct: 1600 gctttgcaagattgattctgagggcaaggcgaggaaggtcgtaggctgctcctgcgtcgt 1659 Query: 432 tgtgaagg 439 ||| |||| Sbjct: 1660 tgtcaagg 1667
>emb|BX819283.1|CNS0A9Q1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB63ZH09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 702 Score = 123 bits (62), Expect = 7e-25 Identities = 170/206 (82%) Strand = Plus / Plus Query: 226 attgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattat 285 |||||||||| | ||||||| ||||||| || ||||| |||||| |||| ||||||||| Sbjct: 220 attgagaagcgtaatgctcagctctgtgtcctggctgaagattgcaaccaacctgattat 279 Query: 286 gtgaagcttgtcaaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagt 345 ||||||||||| || || || || ||||| |||| | | | ||| | || || || ||| Sbjct: 280 gtgaagcttgttaaagctctttgcgctgaccacagcatcaaattgcttactgttccaagt 339 Query: 346 gccaaaactcttggcgagtgggctgggctttgcaagattgactctgagggcaaggcaaga 405 |||||||| || ||||| |||||||| |||||||||||||| ||||||||||| ||||| Sbjct: 340 gccaaaacactcggcgaatgggctggtctttgcaagattgattctgagggcaatgcaagg 399 Query: 406 aaggtggtgggctgctcatgtgtcgt 431 ||||| || || ||||||||| |||| Sbjct: 400 aaggttgttggatgctcatgtctcgt 425
>ref|NM_179850.1| Arabidopsis thaliana structural constituent of ribosome AT2G32060 transcript variant AT2G32060.3 mRNA, complete cds Length = 694 Score = 115 bits (58), Expect = 2e-22 Identities = 169/206 (82%) Strand = Plus / Plus Query: 226 attgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattat 285 |||||||||| | ||||||| ||||||| || ||||| |||||| |||| ||||||||| Sbjct: 239 attgagaagcgtaatgctcagctctgtgtcctggctgaagattgcaaccaacctgattat 298 Query: 286 gtgaagcttgtcaaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagt 345 || |||||||| || || || || ||||| |||| | | | ||| | || || || ||| Sbjct: 299 gtcaagcttgttaaagctctttgcgctgaccacagcatcaaattgcttactgttccaagt 358 Query: 346 gccaaaactcttggcgagtgggctgggctttgcaagattgactctgagggcaaggcaaga 405 |||||||| || ||||| |||||||| |||||||||||||| ||||||||||| ||||| Sbjct: 359 gccaaaacactcggcgaatgggctggtctttgcaagattgattctgagggcaatgcaagg 418 Query: 406 aaggtggtgggctgctcatgtgtcgt 431 ||||| || || ||||||||| |||| Sbjct: 419 aaggttgttggatgctcatgtctcgt 444
>ref|NM_128766.4| Arabidopsis thaliana structural constituent of ribosome AT2G32060 transcript variant AT2G32060.1 mRNA, complete cds Length = 759 Score = 115 bits (58), Expect = 2e-22 Identities = 169/206 (82%) Strand = Plus / Plus Query: 226 attgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattat 285 |||||||||| | ||||||| ||||||| || ||||| |||||| |||| ||||||||| Sbjct: 277 attgagaagcgtaatgctcagctctgtgtcctggctgaagattgcaaccaacctgattat 336 Query: 286 gtgaagcttgtcaaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagt 345 || |||||||| || || || || ||||| |||| | | | ||| | || || || ||| Sbjct: 337 gtcaagcttgttaaagctctttgcgctgaccacagcatcaaattgcttactgttccaagt 396 Query: 346 gccaaaactcttggcgagtgggctgggctttgcaagattgactctgagggcaaggcaaga 405 |||||||| || ||||| |||||||| |||||||||||||| ||||||||||| ||||| Sbjct: 397 gccaaaacactcggcgaatgggctggtctttgcaagattgattctgagggcaatgcaagg 456 Query: 406 aaggtggtgggctgctcatgtgtcgt 431 ||||| || || ||||||||| |||| Sbjct: 457 aaggttgttggatgctcatgtctcgt 482
>ref|NM_179849.2| Arabidopsis thaliana structural constituent of ribosome AT2G32060 transcript variant AT2G32060.2 mRNA, complete cds Length = 723 Score = 115 bits (58), Expect = 2e-22 Identities = 169/206 (82%) Strand = Plus / Plus Query: 226 attgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattat 285 |||||||||| | ||||||| ||||||| || ||||| |||||| |||| ||||||||| Sbjct: 241 attgagaagcgtaatgctcagctctgtgtcctggctgaagattgcaaccaacctgattat 300 Query: 286 gtgaagcttgtcaaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagt 345 || |||||||| || || || || ||||| |||| | | | ||| | || || || ||| Sbjct: 301 gtcaagcttgttaaagctctttgcgctgaccacagcatcaaattgcttactgttccaagt 360 Query: 346 gccaaaactcttggcgagtgggctgggctttgcaagattgactctgagggcaaggcaaga 405 |||||||| || ||||| |||||||| |||||||||||||| ||||||||||| ||||| Sbjct: 361 gccaaaacactcggcgaatgggctggtctttgcaagattgattctgagggcaatgcaagg 420 Query: 406 aaggtggtgggctgctcatgtgtcgt 431 ||||| || || ||||||||| |||| Sbjct: 421 aaggttgttggatgctcatgtctcgt 446
>gb|AY133636.1| Arabidopsis thaliana At2g32060/F22D22.19 mRNA, complete cds Length = 435 Score = 115 bits (58), Expect = 2e-22 Identities = 169/206 (82%) Strand = Plus / Plus Query: 226 attgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattat 285 |||||||||| | ||||||| ||||||| || ||||| |||||| |||| ||||||||| Sbjct: 163 attgagaagcgtaatgctcagctctgtgtcctggctgaagattgcaaccaacctgattat 222 Query: 286 gtgaagcttgtcaaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagt 345 || |||||||| || || || || ||||| |||| | | | ||| | || || || ||| Sbjct: 223 gtcaagcttgttaaagctctttgcgctgaccacagcatcaaattgcttactgttccaagt 282 Query: 346 gccaaaactcttggcgagtgggctgggctttgcaagattgactctgagggcaaggcaaga 405 |||||||| || ||||| |||||||| |||||||||||||| ||||||||||| ||||| Sbjct: 283 gccaaaacactcggcgaatgggctggtctttgcaagattgattctgagggcaatgcaagg 342 Query: 406 aaggtggtgggctgctcatgtgtcgt 431 ||||| || || ||||||||| |||| Sbjct: 343 aaggttgttggatgctcatgtctcgt 368
>gb|AY050324.1| Arabidopsis thaliana At2g32060/F22D22.19 mRNA, complete cds Length = 696 Score = 115 bits (58), Expect = 2e-22 Identities = 169/206 (82%) Strand = Plus / Plus Query: 226 attgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattat 285 |||||||||| | ||||||| ||||||| || ||||| |||||| |||| ||||||||| Sbjct: 241 attgagaagcgtaatgctcagctctgtgtcctggctgaagattgcaaccaacctgattat 300 Query: 286 gtgaagcttgtcaaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagt 345 || |||||||| || || || || ||||| |||| | | | ||| | || || || ||| Sbjct: 301 gtcaagcttgttaaagctctttgcgctgaccacagcatcaaattgcttactgttccaagt 360 Query: 346 gccaaaactcttggcgagtgggctgggctttgcaagattgactctgagggcaaggcaaga 405 |||||||| || ||||| |||||||| |||||||||||||| ||||||||||| ||||| Sbjct: 361 gccaaaacactcggcgaatgggctggtctttgcaagattgattctgagggcaatgcaagg 420 Query: 406 aaggtggtgggctgctcatgtgtcgt 431 ||||| || || ||||||||| |||| Sbjct: 421 aaggttgttggatgctcatgtctcgt 446
>gb|AY085161.1| Arabidopsis thaliana clone 13453 mRNA, complete sequence Length = 732 Score = 115 bits (58), Expect = 2e-22 Identities = 169/206 (82%) Strand = Plus / Plus Query: 226 attgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattat 285 |||||||||| | ||||||| ||||||| || ||||| |||||| |||| ||||||||| Sbjct: 277 attgagaagcgtaatgctcagctctgtgtcctggctgaagattgcaaccaacctgattat 336 Query: 286 gtgaagcttgtcaaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagt 345 || |||||||| || || || || ||||| |||| | | | ||| | || || || ||| Sbjct: 337 gtcaagcttgttaaagctctttgcgctgaccacagcatcaaattgcttactgttccaagt 396 Query: 346 gccaaaactcttggcgagtgggctgggctttgcaagattgactctgagggcaaggcaaga 405 |||||||| || ||||| |||||||| |||||||||||||| ||||||||||| ||||| Sbjct: 397 gccaaaacactcggcgaatgggctggtctttgcaagattgattctgagggcaatgcaagg 456 Query: 406 aaggtggtgggctgctcatgtgtcgt 431 ||||| || || ||||||||| |||| Sbjct: 457 aaggttgttggatgctcatgtctcgt 482
>gb|AF154659.1| Nicotiana tabacum clone PR50 mRNA sequence Length = 708 Score = 97.6 bits (49), Expect = 4e-17 Identities = 291/369 (78%), Gaps = 2/369 (0%) Strand = Plus / Minus Query: 124 cttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtcaagtgct 183 ||||| |||||||||||| | ||||| ||||||||||| ||| | | |||||| | ||| Sbjct: 581 cttggggagcccatggacatcatgaccgctctgcagctggtgctcaggaagtctaaagct 522 Query: 184 catgatggccttg-tcaagggactccgtgaagctgcaaaagcgattgagaagcatgctgc 242 |||| || |||| || ||| ||||| ||||| ||| || | |||||||||||||||||| Sbjct: 521 catggaggacttgctcgagg-actccatgaaggtgctaaggtgattgagaagcatgctgc 463 Query: 243 tcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtcaaggc 302 ||| | |||||||| || ||||| ||||||||||| || ||||| ||||| ||||| || Sbjct: 462 gcagctttgtgtgctagcagaggactgcgaccagccagactatgtcaagctggtcaaagc 403 Query: 303 actctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactcttggcga 362 || |||||||| ||||| || ||| | || || || | ||| |||||||||||||| Sbjct: 402 tctttgtgctgatcacaatgtcagtttgattacagttcccaatgcaaaaactcttggcga 343 Query: 363 gtgggctgggctttgcaagattgactctgagggcaaggcaagaaaggtggtgggctgctc 422 |||||||| | ||||| ||||| ||||| || || ||||| || || || || || Sbjct: 342 atgggctggtttatgcaaaattgattctgaagggaaagcaaggaaagttgttggttgtgg 283 Query: 423 atgtgtcgttgtgaaggactatggtgaagattcggagggtcttcacatcgtgcaggaata 482 ||||| || |||||||| ||||| ||||| | |||||||| || ||||| ||||| || Sbjct: 282 ctgtgttgtcgtgaaggattatggggaagagactgagggtctccatatcgtccaggagta 223 Query: 483 cgtcaagtc 491 ||| ||||| Sbjct: 222 cgtgaagtc 214
>ref|NM_101461.3| Arabidopsis thaliana structural constituent of ribosome AT1G15930 transcript variant AT1G15930.1 mRNA, complete cds Length = 861 Score = 95.6 bits (48), Expect = 2e-16 Identities = 150/184 (81%) Strand = Plus / Plus Query: 259 gctgaggattgcgaccagcctgattatgtgaagcttgtcaaggcactctgtgctgagcac 318 ||||| || ||| |||||||||||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 379 gctgaagactgcaaccagcctgattatgtcaagcttgtgaaggctctctgtgctgatcac 438 Query: 319 aacgttcacttggtcaccgtgcctagtgccaaaactcttggcgagtgggctgggctttgc 378 | || ||| | || || || |||||||| || |||||||| |||||||| || ||| Sbjct: 439 gaagtcaggttgctaacagttccaagtgccaagacccttggcgaatgggctggtctctgc 498 Query: 379 aagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaag 438 |||||||| |||||||| || || || ||||| || || ||||||||| | ||||| ||| Sbjct: 499 aagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtcaag 558 Query: 439 gact 442 |||| Sbjct: 559 gact 562
>ref|NM_179342.1| Arabidopsis thaliana structural constituent of ribosome AT1G15930 transcript variant AT1G15930.2 mRNA, complete cds Length = 758 Score = 95.6 bits (48), Expect = 2e-16 Identities = 150/184 (81%) Strand = Plus / Plus Query: 259 gctgaggattgcgaccagcctgattatgtgaagcttgtcaaggcactctgtgctgagcac 318 ||||| || ||| |||||||||||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 276 gctgaagactgcaaccagcctgattatgtcaagcttgtgaaggctctctgtgctgatcac 335 Query: 319 aacgttcacttggtcaccgtgcctagtgccaaaactcttggcgagtgggctgggctttgc 378 | || ||| | || || || |||||||| || |||||||| |||||||| || ||| Sbjct: 336 gaagtcaggttgctaacagttccaagtgccaagacccttggcgaatgggctggtctctgc 395 Query: 379 aagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaag 438 |||||||| |||||||| || || || ||||| || || ||||||||| | ||||| ||| Sbjct: 396 aagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtcaag 455 Query: 439 gact 442 |||| Sbjct: 456 gact 459
>gb|AY054130.1| Arabidopsis thaliana At1g15930/T24D18_3 mRNA, complete cds Length = 435 Score = 95.6 bits (48), Expect = 2e-16 Identities = 150/184 (81%) Strand = Plus / Plus Query: 259 gctgaggattgcgaccagcctgattatgtgaagcttgtcaaggcactctgtgctgagcac 318 ||||| || ||| |||||||||||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 196 gctgaagactgcaaccagcctgattatgtcaagcttgtgaaggctctctgtgctgatcac 255 Query: 319 aacgttcacttggtcaccgtgcctagtgccaaaactcttggcgagtgggctgggctttgc 378 | || ||| | || || || |||||||| || |||||||| |||||||| || ||| Sbjct: 256 gaagtcaggttgctaacagttccaagtgccaagacccttggcgaatgggctggtctctgc 315 Query: 379 aagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaag 438 |||||||| |||||||| || || || ||||| || || ||||||||| | ||||| ||| Sbjct: 316 aagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtcaag 375 Query: 439 gact 442 |||| Sbjct: 376 gact 379
>gb|AF380626.1|AF380626 Arabidopsis thaliana At1g15930/T24D18_3 mRNA, complete cds Length = 692 Score = 95.6 bits (48), Expect = 2e-16 Identities = 150/184 (81%) Strand = Plus / Plus Query: 259 gctgaggattgcgaccagcctgattatgtgaagcttgtcaaggcactctgtgctgagcac 318 ||||| || ||| |||||||||||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 276 gctgaagactgcaaccagcctgattatgtcaagcttgtgaaggctctctgtgctgatcac 335 Query: 319 aacgttcacttggtcaccgtgcctagtgccaaaactcttggcgagtgggctgggctttgc 378 | || ||| | || || || |||||||| || |||||||| |||||||| || ||| Sbjct: 336 gaagtcaggttgctaacagttccaagtgccaagacccttggcgaatgggctggtctctgc 395 Query: 379 aagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaag 438 |||||||| |||||||| || || || ||||| || || ||||||||| | ||||| ||| Sbjct: 396 aagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtcaag 455 Query: 439 gact 442 |||| Sbjct: 456 gact 459
>emb|BX815848.1|CNS0ABMM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH12ZC08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 658 Score = 95.6 bits (48), Expect = 2e-16 Identities = 150/184 (81%) Strand = Plus / Plus Query: 259 gctgaggattgcgaccagcctgattatgtgaagcttgtcaaggcactctgtgctgagcac 318 ||||| || ||| |||||||||||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 252 gctgaagactgcaaccagcctgattatgtcaagcttgtgaaggctctctgtgctgatcac 311 Query: 319 aacgttcacttggtcaccgtgcctagtgccaaaactcttggcgagtgggctgggctttgc 378 | || ||| | || || || |||||||| || |||||||| |||||||| || ||| Sbjct: 312 gaagtcaggttgctaacagttccaagtgccaagacccttggcgaatgggctggtctctgc 371 Query: 379 aagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaag 438 |||||||| |||||||| || || || ||||| || || ||||||||| | ||||| ||| Sbjct: 372 aagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtcaag 431 Query: 439 gact 442 |||| Sbjct: 432 gact 435
>emb|BX818653.1|CNS0AB7K Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL90ZB11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 687 Score = 95.6 bits (48), Expect = 2e-16 Identities = 150/184 (81%) Strand = Plus / Plus Query: 259 gctgaggattgcgaccagcctgattatgtgaagcttgtcaaggcactctgtgctgagcac 318 ||||| || ||| |||||||||||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 241 gctgaagactgcaaccagcctgattatgtcaagcttgtgaaggctctctgtgctgatcac 300 Query: 319 aacgttcacttggtcaccgtgcctagtgccaaaactcttggcgagtgggctgggctttgc 378 | || ||| | || || || |||||||| || |||||||| |||||||| || ||| Sbjct: 301 gaagtcaggttgctaacagtaccaagtgccaagacccttggcgaatgggctggtctctgc 360 Query: 379 aagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaag 438 |||||||| |||||||| || || || ||||| || || ||||||||| | ||||| ||| Sbjct: 361 aagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtcaag 420 Query: 439 gact 442 |||| Sbjct: 421 gact 424
>gb|AY084613.1| Arabidopsis thaliana clone 11328 mRNA, complete sequence Length = 782 Score = 95.6 bits (48), Expect = 2e-16 Identities = 150/184 (81%) Strand = Plus / Plus Query: 259 gctgaggattgcgaccagcctgattatgtgaagcttgtcaaggcactctgtgctgagcac 318 ||||| || ||| |||||||||||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 379 gctgaagactgcaaccagcctgattatgtcaagcttgtgaaggctctctgtgctgatcac 438 Query: 319 aacgttcacttggtcaccgtgcctagtgccaaaactcttggcgagtgggctgggctttgc 378 | || ||| | || || || |||||||| || |||||||| |||||||| || ||| Sbjct: 439 gaagtcaggttgctaacagttccaagtgccaagacccttggcgaatgggctggtctctgc 498 Query: 379 aagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaag 438 |||||||| |||||||| || || || ||||| || || ||||||||| | ||||| ||| Sbjct: 499 aagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtcaag 558 Query: 439 gact 442 |||| Sbjct: 559 gact 562
>emb|BX813855.1|CNS0AEMV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB43ZB03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 635 Score = 93.7 bits (47), Expect = 6e-16 Identities = 140/171 (81%) Strand = Plus / Plus Query: 272 accagcctgattatgtgaagcttgtcaaggcactctgtgctgagcacaacgttcacttgg 331 |||||||||||||||| |||||||| ||||| ||||||||||| ||| | || ||| Sbjct: 268 accagcctgattatgtcaagcttgtgaaggctctctgtgctgatcacgaagtcaggttgc 327 Query: 332 tcaccgtgcctagtgccaaaactcttggcgagtgggctgggctttgcaagattgactctg 391 | || || || |||||||| || |||||||| |||||||| || ||||||||||| |||| Sbjct: 328 taacagttccaagtgccaagacccttggcgaatgggctggtctctgcaagattgattctg 387 Query: 392 agggcaaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaaggact 442 |||| || || || ||||| || || ||||||||| | ||||| ||||||| Sbjct: 388 agggtaatgccaggaaggttgttggatgctcatgtcttgttgtcaaggact 438
>emb|CT573502.2| Medicago truncatula chromosome 5 clone mte1-69f21, COMPLETE SEQUENCE Length = 89977 Score = 75.8 bits (38), Expect = 2e-10 Identities = 68/78 (87%) Strand = Plus / Minus Query: 210 tgaagctgcaaaagcgattgagaagcatgctgctcagatctgtgtgcttgctgaggattg 269 ||||| |||||||| |||||||||||||||||| ||| | ||||| || ||||| ||||| Sbjct: 44266 tgaaggtgcaaaagtgattgagaagcatgctgcacagctttgtgttctagctgaagattg 44207 Query: 270 cgaccagcctgattatgt 287 ||||| ||||||||||| Sbjct: 44206 tgaccaacctgattatgt 44189
>gb|AC122164.6| Medicago truncatula clone mth2-24h4, complete sequence Length = 112428 Score = 73.8 bits (37), Expect = 6e-10 Identities = 58/65 (89%) Strand = Plus / Minus Query: 220 aaagcgattgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgaccagcct 279 |||| ||| |||||||||||||| ||| ||||||| |||||||||||||| ||||| ||| Sbjct: 54505 aaagtgatcgagaagcatgctgcacagctctgtgttcttgctgaggattgtgaccaacct 54446 Query: 280 gatta 284 ||||| Sbjct: 54445 gatta 54441
>gb|AC153003.14| Medicago truncatula clone mth2-96o5, complete sequence Length = 93881 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Minus Query: 250 tgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtcaaggcactctgt 309 ||||| ||||| || ||||| ||||||||||| ||||| || ||||||||||| || ||| Sbjct: 18467 tgtgttcttgcagaagattgtgaccagcctgactatgttaaacttgtcaaggctctttgt 18408 Query: 310 gctgagcacaa 320 ||||||||||| Sbjct: 18407 gctgagcacaa 18397
>gb|AC006223.4| Arabidopsis thaliana chromosome 2 clone F22D22 map TEn5, complete sequence Length = 103194 Score = 63.9 bits (32), Expect = 6e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 372 gctttgcaagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgt 431 ||||||||||||||| ||||||||||| ||||| ||||| || || ||||||||| |||| Sbjct: 49936 gctttgcaagattgattctgagggcaatgcaaggaaggttgttggatgctcatgtctcgt 49995 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 226 attgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattat 285 |||||||||| | ||||||| ||||||| || ||||| |||||| |||| ||||||||| Sbjct: 49702 attgagaagcgtaatgctcagctctgtgtcctggctgaagattgcaaccaacctgattat 49761 Query: 286 gtgaagcttgt 296 || |||||||| Sbjct: 49762 gtcaagcttgt 49772
>gb|AC010924.2|T24D18 Arabidopsis thaliana chromosome 1 BAC T24D18 sequence, complete sequence Length = 80442 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 259 gctgaggattgcgaccagcctgattatgtgaagcttgtcaaggcactctgtgctga 314 ||||| || ||| |||||||||||||||| |||||||| ||||| ||||||||||| Sbjct: 7536 gctgaagactgcaaccagcctgattatgtcaagcttgtgaaggctctctgtgctga 7591 Score = 40.1 bits (20), Expect = 8.3 Identities = 53/64 (82%) Strand = Plus / Plus Query: 376 tgcaagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgttgtg 435 ||||||||||| |||||||| || || || ||||| || || ||||||||| | ||||| Sbjct: 7774 tgcaagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtc 7833 Query: 436 aagg 439 |||| Sbjct: 7834 aagg 7837
>gb|BT012865.1| Lycopersicon esculentum clone 113957F, mRNA sequence Length = 749 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 340 cctagtgccaaaactcttggcgagtgggctgggctttgcaagattgactctgagggcaa 398 |||| |||||| || ||||| || |||||||| || ||||||||||||||||| ||||| Sbjct: 337 cctaatgccaagacacttggtgaatgggctggtctgtgcaagattgactctgaaggcaa 395
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 397 aaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaagg 439 ||||| ||| ||||||| ||||||||||||||||| ||||||| Sbjct: 32277172 aaggctagagaggtggtcggctgctcatgtgtcgtcgtgaagg 32277214 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 180 tgctcatgatggccttgtcaagggactccgtga 212 ||||||||||| |||||||||||| |||||||| Sbjct: 32274991 tgctcatgatgaccttgtcaagggtctccgtga 32275023 Score = 48.1 bits (24), Expect = 0.034 Identities = 42/48 (87%) Strand = Plus / Plus Query: 325 cacttggtcaccgtgcctagtgccaaaactcttggcgagtgggctggg 372 ||||||||||| || |||||| | | |||||||||||| ||||||||| Sbjct: 32276897 cacttggtcactgttcctagtacaagaactcttggcgaatgggctggg 32276944
>gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17, complete sequence Length = 102751 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 397 aaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaagg 439 ||||| ||| ||||||| ||||||||||||||||| ||||||| Sbjct: 10939 aaggctagagaggtggtcggctgctcatgtgtcgtcgtgaagg 10981 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 180 tgctcatgatggccttgtcaagggactccgtga 212 ||||||||||| |||||||||||| |||||||| Sbjct: 8760 tgctcatgatgaccttgtcaagggtctccgtga 8792 Score = 48.1 bits (24), Expect = 0.034 Identities = 42/48 (87%) Strand = Plus / Plus Query: 325 cacttggtcaccgtgcctagtgccaaaactcttggcgagtgggctggg 372 ||||||||||| || |||||| | | |||||||||||| ||||||||| Sbjct: 10664 cacttggtcactgttcctagtacaagaactcttggcgaatgggctggg 10711
>gb|AC091123.4| Oryza sativa chromosome 3 BAC OSJNBb0093E13 genomic sequence, complete sequence Length = 129778 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 397 aaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaagg 439 ||||| ||| ||||||| ||||||||||||||||| ||||||| Sbjct: 128844 aaggctagagaggtggtcggctgctcatgtgtcgtcgtgaagg 128886 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 180 tgctcatgatggccttgtcaagggactccgtga 212 ||||||||||| |||||||||||| |||||||| Sbjct: 126665 tgctcatgatgaccttgtcaagggtctccgtga 126697 Score = 48.1 bits (24), Expect = 0.034 Identities = 42/48 (87%) Strand = Plus / Plus Query: 325 cacttggtcaccgtgcctagtgccaaaactcttggcgagtgggctggg 372 ||||||||||| || |||||| | | |||||||||||| ||||||||| Sbjct: 128569 cacttggtcactgttcctagtacaagaactcttggcgaatgggctggg 128616
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 397 aaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaagg 439 ||||| ||| ||||||| ||||||||||||||||| ||||||| Sbjct: 32367682 aaggctagagaggtggtcggctgctcatgtgtcgtcgtgaagg 32367724 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 180 tgctcatgatggccttgtcaagggactccgtga 212 ||||||||||| |||||||||||| |||||||| Sbjct: 32365503 tgctcatgatgaccttgtcaagggtctccgtga 32365535 Score = 48.1 bits (24), Expect = 0.034 Identities = 42/48 (87%) Strand = Plus / Plus Query: 325 cacttggtcaccgtgcctagtgccaaaactcttggcgagtgggctggg 372 ||||||||||| || |||||| | | |||||||||||| ||||||||| Sbjct: 32367407 cacttggtcactgttcctagtacaagaactcttggcgaatgggctggg 32367454
>gb|AY245452.1| Dermacentor variabilis 40S ribosomal protein S12 mRNA, complete cds Length = 607 Score = 50.1 bits (25), Expect = 0.009 Identities = 73/89 (82%) Strand = Plus / Plus Query: 355 cttggcgagtgggctgggctttgcaagattgactctgagggcaaggcaagaaaggtggtg 414 |||||||||||||| || || |||||||| ||| || |||||||| || || ||||| Sbjct: 319 cttggcgagtgggccggcctctgcaagatcgacaaggaaggcaaggcgaggaaagtggtc 378 Query: 415 ggctgctcatgtgtcgttgtgaaggacta 443 |||||| |||||||| ||||||||||| Sbjct: 379 ggctgcagttgtgtcgtggtgaaggacta 407
>gb|AC158631.6| Mus musculus 10 BAC RP23-424I1 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 206425 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 383 ttgactctgagggcaaggcaagaaagg 409 |||||||||||| |||||||||||||| Sbjct: 166816 ttgactctgaggccaaggcaagaaagg 166842
>gb|AC155325.5| Mus musculus 10 BAC RP24-86C24 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 171402 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 383 ttgactctgagggcaaggcaagaaagg 409 |||||||||||| |||||||||||||| Sbjct: 149471 ttgactctgaggccaaggcaagaaagg 149497
>dbj|AK147335.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:M5C1014L18 product:Very KIND protein (Fragment), full insert sequence Length = 7300 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 383 ttgactctgagggcaaggcaag 404 |||||||||||||||||||||| Sbjct: 2626 ttgactctgagggcaaggcaag 2605
>dbj|AK147693.1| Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN full-length enriched library, clone:M5C1108L06 product:Very KIND protein (Fragment), full insert sequence Length = 6954 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 383 ttgactctgagggcaaggcaag 404 |||||||||||||||||||||| Sbjct: 2279 ttgactctgagggcaaggcaag 2258
>dbj|AK147672.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:M5C1106C24 product:Very KIND protein (Fragment), full insert sequence Length = 7026 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 383 ttgactctgagggcaaggcaag 404 |||||||||||||||||||||| Sbjct: 2352 ttgactctgagggcaaggcaag 2331
>dbj|AK046817.1| Mus musculus 10 days neonate medulla oblongata cDNA, RIKEN full-length enriched library, clone:B830014K08 product:Very KIND protein (Fragment) homolog [Mus musculus], full insert sequence Length = 3667 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 383 ttgactctgagggcaaggcaag 404 |||||||||||||||||||||| Sbjct: 2362 ttgactctgagggcaaggcaag 2341
>ref|NM_177261.3| Mus musculus kinase non-catalytic C-lobe domain (KIND) containing 1 (Kndc1), mRNA Length = 7175 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 383 ttgactctgagggcaaggcaag 404 |||||||||||||||||||||| Sbjct: 2483 ttgactctgagggcaaggcaag 2462
>gb|AC107822.18| Mus musculus chromosome 7, clone RP23-182C11, complete sequence Length = 220443 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 383 ttgactctgagggcaaggcaag 404 |||||||||||||||||||||| Sbjct: 125647 ttgactctgagggcaaggcaag 125626
>emb|AJ580324.2|MMU580324 Mus musculus mRNA for Very KIND protein (VKIND gene) Length = 5229 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 383 ttgactctgagggcaaggcaag 404 |||||||||||||||||||||| Sbjct: 2134 ttgactctgagggcaaggcaag 2113
>emb|CR847821.11| Zebrafish DNA sequence from clone DKEY-87I10 in linkage group 14, complete sequence Length = 167652 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 142 ttgatgactgctctgcagctt 162 ||||||||||||||||||||| Sbjct: 159631 ttgatgactgctctgcagctt 159651
>gb|AC010063.7| Drosophila melanogaster 3L BAC RP98-16A3 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 194006 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 216 tgcaaaagcgattgagaagca 236 ||||||||||||||||||||| Sbjct: 81627 tgcaaaagcgattgagaagca 81607
>gb|AC093371.6| Genomic sequence for Mus musculus, clone RP23-36P10, complete sequence Length = 177872 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 396 caaggcaagaaaggtggtggg 416 ||||||||||||||||||||| Sbjct: 146770 caaggcaagaaaggtggtggg 146790
>gb|AE003473.3| Drosophila melanogaster chromosome 3L, section 7 of 83 of the complete sequence Length = 315108 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 216 tgcaaaagcgattgagaagca 236 ||||||||||||||||||||| Sbjct: 150268 tgcaaaagcgattgagaagca 150288
>gb|AC130658.36| Mus musculus chromosome 1, clone RP23-309D5, complete sequence Length = 184094 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 gtgggctgggctttgcaaga 382 |||||||||||||||||||| Sbjct: 28659 gtgggctgggctttgcaaga 28678
>gb|BC099694.1| Mus musculus RIKEN cDNA 4831426I19 gene, mRNA (cDNA clone MGC:106312 IMAGE:4507746), complete cds Length = 3370 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 cagcttgtgatgaagaagtc 176 |||||||||||||||||||| Sbjct: 2423 cagcttgtgatgaagaagtc 2442
>gb|AC147375.3| Mus musculus BAC clone RP24-159O13 from chromosome 12, complete sequence Length = 176510 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 cagcttgtgatgaagaagtc 176 |||||||||||||||||||| Sbjct: 161616 cagcttgtgatgaagaagtc 161597
>ref|XM_983651.1| PREDICTED: Mus musculus RIKEN cDNA 4831426I19 gene, transcript variant 2 (4831426I19Rik), mRNA Length = 3341 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 cagcttgtgatgaagaagtc 176 |||||||||||||||||||| Sbjct: 2194 cagcttgtgatgaagaagtc 2213
>gb|AC093819.4| Homo sapiens BAC clone RP11-368D18 from 4, complete sequence Length = 168474 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 558 tcatgtctgaaacctgttag 577 |||||||||||||||||||| Sbjct: 126950 tcatgtctgaaacctgttag 126931
>gb|AC126933.3| Mus musculus BAC clone RP24-117M7 from chromosome 1, complete sequence Length = 170885 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 385 gactctgagggcaaggcaagaaag 408 ||||||||||| |||||||||||| Sbjct: 129232 gactctgaggggaaggcaagaaag 129255
>gb|AC124383.3| Mus musculus BAC clone RP24-411E14 from chromosome 18, complete sequence Length = 175177 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 gagggcaaggcaagaaaggt 410 |||||||||||||||||||| Sbjct: 16688 gagggcaaggcaagaaaggt 16707
>gb|AC024859.1| Caenorhabditis elegans cosmid Y71H2AM, complete sequence Length = 143786 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 tatggtgaagattcggaggg 461 |||||||||||||||||||| Sbjct: 21060 tatggtgaagattcggaggg 21079
>emb|AL080314.29|HSDJ60O19 Human DNA sequence from clone RP1-60O19 on chromosome 6q16.2-21 Contains two novel genes (including FLJ22314), complete sequence Length = 161355 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 cctagtgccaaaactcttgg 359 |||||||||||||||||||| Sbjct: 73353 cctagtgccaaaactcttgg 73372
>gb|AC165083.2| Mus musculus BAC clone RP23-411I6 from chromosome 18, complete sequence Length = 208109 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 gagggcaaggcaagaaaggt 410 |||||||||||||||||||| Sbjct: 156537 gagggcaaggcaagaaaggt 156556
>gb|AC126751.2| Homo sapiens chromosome 5 clone CTD-2224K20, complete sequence Length = 120658 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 565 tgaaacctgttagcctatgaacat 588 ||||| |||||||||||||||||| Sbjct: 55332 tgaaaactgttagcctatgaacat 55355
>gb|AC113402.2| Homo sapiens chromosome 5 clone RP11-454P21, complete sequence Length = 90271 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 565 tgaaacctgttagcctatgaacat 588 ||||| |||||||||||||||||| Sbjct: 64523 tgaaaactgttagcctatgaacat 64546
>dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, complete sequence Length = 3354505 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 gcttgctgaggattgcgacc 274 |||||||||||||||||||| Sbjct: 756170 gcttgctgaggattgcgacc 756151
>ref|NM_172500.1| Mus musculus RIKEN cDNA 4831426I19 gene (4831426I19Rik), mRNA Length = 5069 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 cagcttgtgatgaagaagtc 176 |||||||||||||||||||| Sbjct: 2070 cagcttgtgatgaagaagtc 2089
>dbj|AK029216.1| Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched library, clone:4831426I19 product:hypothetical Spectrin repeat containing protein, full insert sequence Length = 5069 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 cagcttgtgatgaagaagtc 176 |||||||||||||||||||| Sbjct: 2070 cagcttgtgatgaagaagtc 2089
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 472 gtgcaggaatacgtcaagtcgcac 495 |||||||| ||||||||||||||| Sbjct: 3718687 gtgcaggactacgtcaagtcgcac 3718664
>ref|NM_065204.2| Caenorhabditis elegans Y71H2AM.10 (Y71H2AM.10) mRNA, complete cds Length = 2739 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 tatggtgaagattcggaggg 461 |||||||||||||||||||| Sbjct: 963 tatggtgaagattcggaggg 944
>dbj|AK030542.1| Mus musculus adult male pituitary gland cDNA, RIKEN full-length enriched library, clone:5330429E21 product:hypothetical protein, full insert sequence Length = 3080 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 cagcttgtgatgaagaagtc 176 |||||||||||||||||||| Sbjct: 61 cagcttgtgatgaagaagtc 80
>ref|XM_234584.3| PREDICTED: Rattus norvegicus similar to RIKEN cDNA 4831426I19 (predicted) (LOC299356), mRNA Length = 3471 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 cagcttgtgatgaagaagtc 176 |||||||||||||||||||| Sbjct: 2368 cagcttgtgatgaagaagtc 2387
>ref|XM_233076.2| PREDICTED: Rattus norvegicus similar to ribosomal protein S12 (LOC313283), mRNA Length = 424 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 aggcactctgtgctgagcac 318 |||||||||||||||||||| Sbjct: 208 aggcactctgtgctgagcac 227
>emb|CR548627.7| Zebrafish DNA sequence from clone DKEYP-24A7 in linkage group 19, complete sequence Length = 146348 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 tgatgactgctctgcagctt 162 |||||||||||||||||||| Sbjct: 112167 tgatgactgctctgcagctt 112148
>gb|AC132400.3| Mus musculus BAC clone RP23-400A19 from 1, complete sequence Length = 218935 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 385 gactctgagggcaaggcaagaaag 408 ||||||||||| |||||||||||| Sbjct: 35225 gactctgaggggaaggcaagaaag 35248
>gb|U94500.1|TNU94500 Tilapia nilotica ribosomal protein S12 mRNA, complete cds Length = 468 Score = 40.1 bits (20), Expect = 8.3 Identities = 74/92 (80%) Strand = Plus / Plus Query: 355 cttggcgagtgggctgggctttgcaagattgactctgagggcaaggcaagaaaggtggtg 414 ||||| ||||||| ||| || |||||||| ||| |||||| || || | ||||||||| Sbjct: 288 cttggtgagtgggttggtctgtgcaagatcgaccgtgagggtaaaccacgcaaggtggtg 347 Query: 415 ggctgctcatgtgtcgttgtgaaggactatgg 446 |||||| || |||||||| ||||| ||||| Sbjct: 348 ggctgcagctgcgtcgttgttaaggattatgg 379 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,283,693 Number of Sequences: 3902068 Number of extensions: 4283693 Number of successful extensions: 73562 Number of sequences better than 10.0: 80 Number of HSP's better than 10.0 without gapping: 81 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 73301 Number of HSP's gapped (non-prelim): 260 length of query: 608 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 585 effective length of database: 17,143,297,704 effective search space: 10028829156840 effective search space used: 10028829156840 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
