Clone Information

BLAST Search Result

Clone Name	bags4a07
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	TSN2_MOUSE (Q922J6) Tetraspanin-2 (Tspan-2)	37	0.033
2	TSN2_HUMAN (O60636) Tetraspanin-2 (Tspan-2)	37	0.033
3	CD53_HUMAN (P19397) Leukocyte surface antigen CD53 (Cell surface...	36	0.043
4	CD82_MOUSE (P40237) CD82 antigen (Inducible membrane protein R2)...	36	0.057
5	CD82_HUMAN (P27701) CD82 antigen (Inducible membrane protein R2)...	36	0.057
6	IM23_SCHMA (P19331) 23 kDa integral membrane protein (Sm23)	35	0.074
7	IM23_SCHJA (P27591) 23 kDa integral membrane protein (Sj23)	35	0.074
8	IM23_SCHHA (Q26499) 23 kDa integral membrane protein (Sh23)	35	0.074
9	CD82_RAT (O70352) CD82 antigen (Metastasis suppressor homolog)	35	0.074
10	TSN2_RAT (Q9JJW1) Tetraspanin-2 (Tspan-2)	35	0.097
11	TSN1_PONPY (Q5RC27) Tetraspanin-1 (Tspan-1)	35	0.13
12	TSN1_HUMAN (O60635) Tetraspanin-1 (Tspan-1) (Tetraspan NET-1) (T...	35	0.13
13	TSN5_RAT (Q68VK5) Tetraspanin-5 (Tspan-5) (Transmembrane 4 super...	34	0.22
14	TSN5_MOUSE (P62080) Tetraspanin-5 (Tspan-5) (Transmembrane 4 sup...	34	0.22
15	TSN5_HUMAN (P62079) Tetraspanin-5 (Tspan-5) (Transmembrane 4 sup...	34	0.22
16	TSN18_MOUSE (Q80WR1) Tetraspanin-18 (Tspan-18)	34	0.22
17	CD9_FELCA (P40239) CD9 antigen	33	0.28
18	CD9_BOVIN (P30932) CD9 antigen	33	0.28
19	CD53_RAT (P24485) Leukocyte surface antigen CD53 (Cell surface g...	33	0.37
20	CD9_PIG (Q8WMQ3) CD9 antigen	33	0.48
21	CD9_HUMAN (P21926) CD9 antigen (p24) (Leukocyte antigen MIC3) (M...	32	0.63
22	CD9_CERAE (P30409) CD9 antigen (27 kDa diphtheria toxin receptor...	32	0.63
23	CD53_MOUSE (Q61451) Leukocyte surface antigen CD53 (Cell surface...	32	0.63
24	CD9_RAT (P40241) CD9 antigen	32	0.63
25	CD9_MOUSE (P40240) CD9 antigen	32	0.63
26	TSN18_BOVIN (Q58CY8) Tetraspanin-18 (Tspan-18)	32	0.63
27	TSN10_MOUSE (Q8VCF5) Tetraspanin-10 (Tspan-10) (Oculospanin)	32	0.82
28	TSN3_MOUSE (Q9QY33) Tetraspanin-3 (Tspan-3) (Transmembrane 4 sup...	32	0.82
29	CD81_SAGOE (Q9N0J9) CD81 protein	32	0.82
30	CD81_RAT (Q62745) CD81 antigen (26 kDa cell surface protein TAPA...	32	0.82
31	CD81_PANTR (P60034) CD81 antigen (26 kDa cell surface protein TA...	32	0.82
32	CD81_MOUSE (P35762) CD81 antigen (26 kDa cell surface protein TA...	32	0.82
33	CD81_HUMAN (P60033) CD81 antigen (26 kDa cell surface protein TA...	32	0.82
34	CD81_CERAE (O97703) CD81 antigen	32	0.82
35	TSN9_MOUSE (Q8BJU2) Tetraspanin-9 (Tspan-9) (Tetraspan NET-5)	32	1.1
36	TSN9_HUMAN (O75954) Tetraspanin-9 (Tspan-9) (Tetraspan NET-5)	32	1.1
37	CD63_RAT (P28648) CD63 antigen (Mast cell antigen AD1)	31	1.4
38	CD63_MOUSE (P41731) CD63 antigen	31	1.4
39	CD63_FELCA (Q76B49) CD63 antigen	31	1.4
40	MYCN_CHICK (P18444) N-myc proto-oncogene protein	31	1.4
41	CD63_BOVIN (Q9XSK2) CD63 antigen	31	1.4
42	TSN17_MOUSE (Q9D7W4) Tetraspanin-17 (Tspan-17) (Transmembrane 4 ...	31	1.8
43	TSN17_HUMAN (Q96FV3) Tetraspanin-17 (Tspan-17) (Transmembrane 4 ...	31	1.8
44	TSN18_HUMAN (Q96SJ8) Tetraspanin-18 (Tspan-18)	31	1.8
45	RHLB_XANOR (Q5GUR8) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)	30	2.4
46	YGGA_AERHY (P52047) Putative amino acid transporter yggA	30	3.1
47	CD63_RABIT (Q28709) CD63 antigen	30	4.1
48	CD63_HUMAN (P08962) CD63 antigen (Melanoma-associated antigen ME...	30	4.1
49	MKL1_MOUSE (Q8K4J6) MKL/myocardin-like protein 1 (Myocardin-rela...	29	5.3
50	TSN8_HUMAN (P19075) Tetraspanin-8 (Tspan-8) (Transmembrane 4 sup...	29	5.3
51	KLC_STRPU (Q05090) Kinesin light chain (KLC)	29	5.3
52	SYSM_MOUSE (Q9JJL8) Seryl-tRNA synthetase, mitochondrial precurs...	29	5.3
53	SPIKE_CVBLY (P25192) Spike glycoprotein precursor (Peplomer prot...	29	5.3
54	TSN10_HUMAN (Q9H1Z9) Tetraspanin-10 (Tspan-10) (Oculospanin)	29	6.9
55	TSN14_MOUSE (Q8QZY6) Tetraspanin-14 (Tspan-14) (Transmembrane 4 ...	29	6.9
56	TSN14_HUMAN (Q8NG11) Tetraspanin-14 (Tspan-14) (Transmembrane 4 ...	29	6.9
57	NIA1_SOYBN (P54233) Inducible nitrate reductase [NADH] 1 (EC 1.7...	28	9.1
58	IRS1_DROME (Q9XTN2) Insulin receptor substrate 1 (Protein Chico)...	28	9.1
59	M3K2_MOUSE (Q61083) Mitogen-activated protein kinase kinase kina...	28	9.1
60	CDR3_CANAL (O42690) Opaque-specific ABC transporter CDR3	28	9.1

>TSN2_MOUSE (Q922J6) Tetraspanin-2 (Tspan-2)|
          Length = 221

 Score = 36.6 bits (83), Expect = 0.033
 Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
 Frame = +3

Query: 189 DKLPEAWFI--YLFIGVGAVIFIVSLFGCIGAGTRNTCCL 302
           DK PE +++  Y+ +G GA++  V  FGC GA   + C L
Sbjct: 49  DKSPEYFYVGLYVLVGAGALMMTVGFFGCCGAMRESQCVL 88

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>TSN2_HUMAN (O60636) Tetraspanin-2 (Tspan-2)|
          Length = 221

 Score = 36.6 bits (83), Expect = 0.033
 Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
 Frame = +3

Query: 189 DKLPEAWFI--YLFIGVGAVIFIVSLFGCIGAGTRNTCCL 302
           DK PE +++  Y+ +G GA++  V  FGC GA   + C L
Sbjct: 49  DKSPEYFYVGLYVLVGAGALMMAVGFFGCCGAMRESQCVL 88

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>CD53_HUMAN (P19397) Leukocyte surface antigen CD53 (Cell surface glycoprotein|
           CD53) (Tetraspanin-25) (Tspan-25)
          Length = 219

 Score = 36.2 bits (82), Expect = 0.043
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = +3

Query: 177 GSFFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYSFLV 323
           G  F  LP      +F+ VG++I +V+  GC+G+   N C L  +  L+
Sbjct: 41  GVLFHNLPSLTLGNVFVIVGSIIMVVAFLGCMGSIKENKCLLMSFFILL 89

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>CD82_MOUSE (P40237) CD82 antigen (Inducible membrane protein R2) (C33 antigen)|
           (IA4)
          Length = 266

 Score = 35.8 bits (81), Expect = 0.057
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = +3

Query: 216 YLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCY 311
           Y+FIGVGA+  ++   GCIGA     C L  Y
Sbjct: 57  YVFIGVGAITIVMGFLGCIGAVNEVRCLLGLY 88

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>CD82_HUMAN (P27701) CD82 antigen (Inducible membrane protein R2) (C33 antigen)|
           (IA4) (Metastasis suppressor Kangai 1) (Suppressor of
           tumorigenicity-6) (Tetraspanin-27) (Tspan-27)
          Length = 267

 Score = 35.8 bits (81), Expect = 0.057
 Identities = 16/32 (50%), Positives = 19/32 (59%)
 Frame = +3

Query: 216 YLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCY 311
           Y+FIGVGAV  ++   GCIGA     C L  Y
Sbjct: 57  YVFIGVGAVTMLMGFLGCIGAVNEVRCLLGLY 88

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>IM23_SCHMA (P19331) 23 kDa integral membrane protein (Sm23)|
          Length = 218

 Score = 35.4 bits (80), Expect = 0.074
 Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = +3

Query: 189 DKLPEAWFI--YLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYSFLV 323
           D L + W       I VG +I IVS  GC GA   N C L  Y+F +
Sbjct: 45  DNLHKVWQAAPIAIIVVGVIILIVSFLGCCGAIKENVCMLYMYAFFL 91

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>IM23_SCHJA (P27591) 23 kDa integral membrane protein (Sj23)|
          Length = 218

 Score = 35.4 bits (80), Expect = 0.074
 Identities = 17/33 (51%), Positives = 19/33 (57%)
 Frame = +3

Query: 225 IGVGAVIFIVSLFGCIGAGTRNTCCLCCYSFLV 323
           I VG VI IVS  GC GA   N C L  Y+F +
Sbjct: 59  IVVGVVILIVSFLGCCGAIKENVCMLYMYAFFL 91

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>IM23_SCHHA (Q26499) 23 kDa integral membrane protein (Sh23)|
          Length = 218

 Score = 35.4 bits (80), Expect = 0.074
 Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = +3

Query: 189 DKLPEAWFI--YLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYSFLV 323
           D L + W       I VG +I IVS  GC GA   N C L  Y+F +
Sbjct: 45  DNLHKVWQAAPIAIIVVGVIILIVSFLGCCGAIKENVCMLYMYAFFL 91

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>CD82_RAT (O70352) CD82 antigen (Metastasis suppressor homolog)|
          Length = 266

 Score = 35.4 bits (80), Expect = 0.074
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = +3

Query: 216 YLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCY 311
           Y+FIGVGA+  ++   GCIGA     C L  Y
Sbjct: 57  YVFIGVGAITMLMGFLGCIGAVNEVRCLLGLY 88

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>TSN2_RAT (Q9JJW1) Tetraspanin-2 (Tspan-2)|
          Length = 221

 Score = 35.0 bits (79), Expect = 0.097
 Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
 Frame = +3

Query: 189 DKLPEAWFI--YLFIGVGAVIFIVSLFGCIGAGTRNTCCL 302
           +K PE +++  Y+ +G GA++  V  FGC GA   + C L
Sbjct: 49  EKSPEYFYVGLYVLVGAGALMMAVGFFGCCGAMRESQCVL 88

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>TSN1_PONPY (Q5RC27) Tetraspanin-1 (Tspan-1)|
          Length = 241

 Score = 34.7 bits (78), Expect = 0.13
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +3

Query: 216 YLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYSFLV 323
           Y  I  G V+F +   GC GA T + C L  + F++
Sbjct: 58  YFLIAAGVVVFALGFLGCYGAKTESKCALMTFFFIL 93

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>TSN1_HUMAN (O60635) Tetraspanin-1 (Tspan-1) (Tetraspan NET-1) (Tetraspanin|
           TM4-C)
          Length = 241

 Score = 34.7 bits (78), Expect = 0.13
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +3

Query: 216 YLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYSFLV 323
           Y  I  G V+F +   GC GA T + C L  + F++
Sbjct: 58  YFLIAAGVVVFALGFLGCYGAKTESKCALVTFFFIL 93

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>TSN5_RAT (Q68VK5) Tetraspanin-5 (Tspan-5) (Transmembrane 4 superfamily|
           member 9)
          Length = 268

 Score = 33.9 bits (76), Expect = 0.22
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = +3

Query: 213 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYS 314
           ++LF+ VG V+FI+   GCIGA   NT  L  +S
Sbjct: 62  VWLFLVVGGVMFILGFAGCIGALRENTFLLKFFS 95

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>TSN5_MOUSE (P62080) Tetraspanin-5 (Tspan-5) (Transmembrane 4 superfamily|
           member 9) (Tetraspan NET-4)
          Length = 268

 Score = 33.9 bits (76), Expect = 0.22
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = +3

Query: 213 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYS 314
           ++LF+ VG V+FI+   GCIGA   NT  L  +S
Sbjct: 62  VWLFLVVGGVMFILGFAGCIGALRENTFLLKFFS 95

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>TSN5_HUMAN (P62079) Tetraspanin-5 (Tspan-5) (Transmembrane 4 superfamily|
           member 9) (Tetraspan NET-4)
          Length = 268

 Score = 33.9 bits (76), Expect = 0.22
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = +3

Query: 213 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYS 314
           ++LF+ VG V+FI+   GCIGA   NT  L  +S
Sbjct: 62  VWLFLVVGGVMFILGFAGCIGALRENTFLLKFFS 95

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>TSN18_MOUSE (Q80WR1) Tetraspanin-18 (Tspan-18)|
          Length = 248

 Score = 33.9 bits (76), Expect = 0.22
 Identities = 22/107 (20%), Positives = 41/107 (38%)
 Frame = +3

Query: 3   NFFLTVAGLAMVGYGIYLLAEWMRIXXXXXXXXXXXXXXXELLMFGRPMLTVXALGEGGS 182
           NFF+ + G  ++G GI++L +                     ++   P+LT  A      
Sbjct: 17  NFFVFLGGACLLGVGIWVLVD---------------PTGFREIVATNPLLTTGA------ 55

Query: 183 FFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYSFLV 323
                      Y+ + +G ++F++   GC GA   N C L  +   +
Sbjct: 56  -----------YIVLAMGGLLFLLGFLGCCGAVRENRCLLLFFFLFI 91

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>CD9_FELCA (P40239) CD9 antigen|
          Length = 225

 Score = 33.5 bits (75), Expect = 0.28
 Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
 Frame = +3

Query: 189 DKLPEAWF--IYLFIGVGAVIFIVSLFGCIGAGTRNTCCL 302
           D  P +++  +Y+ IG GA++ +V   GC GA   + C L
Sbjct: 47  DSQPSSFYTGVYILIGAGALMMLVGFLGCCGAVQESQCML 86

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>CD9_BOVIN (P30932) CD9 antigen|
          Length = 225

 Score = 33.5 bits (75), Expect = 0.28
 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +3

Query: 213 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCL-CCYSFLV 323
           +Y+ IG GA++ +V   GC GA   + C L   +SFL+
Sbjct: 57  VYILIGAGALMMLVGFLGCCGAVQESQCMLGLFFSFLL 94

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>CD53_RAT (P24485) Leukocyte surface antigen CD53 (Cell surface glycoprotein|
           CD53) (Leukocyte antigen MRC OX-44)
          Length = 218

 Score = 33.1 bits (74), Expect = 0.37
 Identities = 24/107 (22%), Positives = 39/107 (36%)
 Frame = +3

Query: 3   NFFLTVAGLAMVGYGIYLLAEWMRIXXXXXXXXXXXXXXXELLMFGRPMLTVXALGEGGS 182
           NF   V G  ++G+GI+LL +                                     G 
Sbjct: 16  NFLFWVCGCCILGFGIHLLVQ----------------------------------NTYGI 41

Query: 183 FFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYSFLV 323
            F  LP      + + VG++I +V+  GC+G+   N C L  +  L+
Sbjct: 42  LFRNLPFLTLGNVLVIVGSIIMVVAFLGCMGSIKENKCLLMSFFVLL 88

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>CD9_PIG (Q8WMQ3) CD9 antigen|
          Length = 225

 Score = 32.7 bits (73), Expect = 0.48
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +3

Query: 213 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCL 302
           +Y+ IG GA++ +V   GC GA   + C L
Sbjct: 57  VYILIGAGALMMVVGFLGCCGAVQESQCML 86

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>CD9_HUMAN (P21926) CD9 antigen (p24) (Leukocyte antigen MIC3)|
           (Motility-related protein) (MRP-1) (Tetraspanin-29)
           (Tspan-29)
          Length = 227

 Score = 32.3 bits (72), Expect = 0.63
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +3

Query: 213 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCL 302
           +Y+ IG GA++ +V   GC GA   + C L
Sbjct: 59  VYILIGAGALMMLVGFLGCCGAVQESQCML 88

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>CD9_CERAE (P30409) CD9 antigen (27 kDa diphtheria toxin receptor-associated|
           protein) (DRAP27)
          Length = 227

 Score = 32.3 bits (72), Expect = 0.63
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +3

Query: 213 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCL 302
           +Y+ IG GA++ +V   GC GA   + C L
Sbjct: 59  VYILIGAGALMMLVGFLGCCGAVQESQCML 88

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>CD53_MOUSE (Q61451) Leukocyte surface antigen CD53 (Cell surface glycoprotein|
           CD53)
          Length = 218

 Score = 32.3 bits (72), Expect = 0.63
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = +3

Query: 177 GSFFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYSFLV 323
           G  F  LP      + + VG++I +V+  GC+G+   N C L  +  L+
Sbjct: 40  GVLFRNLPFLTLGNILVIVGSIIMVVAFLGCMGSIKENKCLLMSFFVLL 88

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>CD9_RAT (P40241) CD9 antigen|
          Length = 225

 Score = 32.3 bits (72), Expect = 0.63
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +3

Query: 213 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCL 302
           +Y+ IG GA++ +V   GC GA   + C L
Sbjct: 57  VYILIGAGALMMLVGFLGCCGAVQESQCML 86

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>CD9_MOUSE (P40240) CD9 antigen|
          Length = 225

 Score = 32.3 bits (72), Expect = 0.63
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +3

Query: 213 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCL 302
           +Y+ IG GA++ +V   GC GA   + C L
Sbjct: 57  VYILIGAGALMMLVGFLGCCGAVQESQCML 86

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>TSN18_BOVIN (Q58CY8) Tetraspanin-18 (Tspan-18)|
          Length = 249

 Score = 32.3 bits (72), Expect = 0.63
 Identities = 20/107 (18%), Positives = 40/107 (37%)
 Frame = +3

Query: 3   NFFLTVAGLAMVGYGIYLLAEWMRIXXXXXXXXXXXXXXXELLMFGRPMLTVXALGEGGS 182
           NFF+ + G  ++G GI+++ +                     ++   P+L   A      
Sbjct: 17  NFFIFLGGACLLGIGIWVMVD---------------PTGFREIVAANPLLITGA------ 55

Query: 183 FFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYSFLV 323
                      Y+ + +G ++F++   GC GA   N C L  +   +
Sbjct: 56  -----------YILLAMGGLLFLLGFLGCCGAVRENKCLLLFFFLFI 91

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>TSN10_MOUSE (Q8VCF5) Tetraspanin-10 (Tspan-10) (Oculospanin)|
          Length = 331

 Score = 32.0 bits (71), Expect = 0.82
 Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 9/69 (13%)
 Frame = +3

Query: 132 MFGRPMLTVXALG---------EGGSFFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGT 284
           +F  P L   A G         +G  +   +P    + L +G G V+ +VSL GC+GA  
Sbjct: 84  LFSLPSLLALAAGLWGLTVKRSQGIGWGGPVPTDPMLMLVLG-GLVVSVVSLSGCLGAFC 142

Query: 285 RNTCCLCCY 311
            N+C L  Y
Sbjct: 143 ENSCLLHWY 151

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>TSN3_MOUSE (Q9QY33) Tetraspanin-3 (Tspan-3) (Transmembrane 4 superfamily|
           member 8) (Tetraspanin TM4-A) (OSP-associated protein 1)
           (OAP-1)
          Length = 253

 Score = 32.0 bits (71), Expect = 0.82
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = +3

Query: 183 FFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYSFLV 323
           FF+ +   +   + I VGA++FI+ L GC      + C L  + F++
Sbjct: 44  FFEDVYTLFPAVVIIAVGALLFIIGLIGCCATIRESRCGLATFVFIL 90

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>CD81_SAGOE (Q9N0J9) CD81 protein|
          Length = 236

 Score = 32.0 bits (71), Expect = 0.82
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +3

Query: 213 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCL 302
           IY+ I VGAV+  V   GC GA   + C L
Sbjct: 62  IYILIAVGAVMMFVGFLGCYGAIQESQCLL 91

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>CD81_RAT (Q62745) CD81 antigen (26 kDa cell surface protein TAPA-1) (Target|
           of the antiproliferative antibody 1)
          Length = 236

 Score = 32.0 bits (71), Expect = 0.82
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +3

Query: 213 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCL 302
           IY+ I VGAV+  V   GC GA   + C L
Sbjct: 62  IYILIAVGAVMMFVGFLGCYGAIQESQCLL 91

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>CD81_PANTR (P60034) CD81 antigen (26 kDa cell surface protein TAPA-1) (Target|
           of the antiproliferative antibody 1)
          Length = 236

 Score = 32.0 bits (71), Expect = 0.82
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +3

Query: 213 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCL 302
           IY+ I VGAV+  V   GC GA   + C L
Sbjct: 62  IYILIAVGAVMMFVGFLGCYGAIQESQCLL 91

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>CD81_MOUSE (P35762) CD81 antigen (26 kDa cell surface protein TAPA-1) (Target|
           of the antiproliferative antibody 1)
          Length = 236

 Score = 32.0 bits (71), Expect = 0.82
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +3

Query: 213 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCL 302
           IY+ I VGAV+  V   GC GA   + C L
Sbjct: 62  IYILIAVGAVMMFVGFLGCYGAIQESQCLL 91

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>CD81_HUMAN (P60033) CD81 antigen (26 kDa cell surface protein TAPA-1) (Target|
           of the antiproliferative antibody 1) (Tetraspanin-28)
           (Tspan-28)
          Length = 236

 Score = 32.0 bits (71), Expect = 0.82
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +3

Query: 213 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCL 302
           IY+ I VGAV+  V   GC GA   + C L
Sbjct: 62  IYILIAVGAVMMFVGFLGCYGAIQESQCLL 91

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>CD81_CERAE (O97703) CD81 antigen|
          Length = 236

 Score = 32.0 bits (71), Expect = 0.82
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +3

Query: 213 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCL 302
           IY+ I VGAV+  V   GC GA   + C L
Sbjct: 62  IYILIAVGAVMMFVGFLGCYGAIQESQCLL 91

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>TSN9_MOUSE (Q8BJU2) Tetraspanin-9 (Tspan-9) (Tetraspan NET-5)|
          Length = 239

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 13/48 (27%), Positives = 20/48 (41%)
 Frame = +3

Query: 168 GEGGSFFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCY 311
           G   +F    P      L I +G ++ +    GC+GA   N C L  +
Sbjct: 39  GNFATFSPSFPSLSAANLVIAIGTIVMVTGFLGCLGAIKENKCLLLSF 86

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>TSN9_HUMAN (O75954) Tetraspanin-9 (Tspan-9) (Tetraspan NET-5)|
          Length = 239

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 13/48 (27%), Positives = 20/48 (41%)
 Frame = +3

Query: 168 GEGGSFFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCY 311
           G   +F    P      L I +G ++ +    GC+GA   N C L  +
Sbjct: 39  GNFATFSPSFPSLSAANLVIAIGTIVMVTGFLGCLGAIKENKCLLLSF 86

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>CD63_RAT (P28648) CD63 antigen (Mast cell antigen AD1)|
          Length = 237

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +3

Query: 219 LFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYSFLV 323
           + I VGA +F+V+  GC GA   N C +  ++  +
Sbjct: 55  VIIAVGAFLFLVAFVGCCGACKENYCLMITFAIFL 89

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>CD63_MOUSE (P41731) CD63 antigen|
          Length = 237

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +3

Query: 219 LFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYSFLV 323
           + I VGA +F+V+  GC GA   N C +  ++  +
Sbjct: 55  VIIAVGAFLFLVAFVGCCGACKENYCLMITFAIFL 89

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>CD63_FELCA (Q76B49) CD63 antigen|
          Length = 237

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +3

Query: 219 LFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYSFLV 323
           + I VGA +F+V+  GC GA   N C +  ++  +
Sbjct: 55  VIIAVGAFLFLVAFVGCCGACKENYCLMVTFAIFL 89

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>MYCN_CHICK (P18444) N-myc proto-oncogene protein|
          Length = 441

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 19/59 (32%), Positives = 28/59 (47%)
 Frame = -2

Query: 195 ACRRNXRPLQGPRPSASGGRT*VTQPAGPETAVPLRHHRRSSSTPRAGRSHSRPWQGRR 19
           ACRR  +P +GP  +  GG   V +   P    P   ++R ++ P  G +   P  GRR
Sbjct: 168 ACRRREQPQRGPGRAELGGS--VPECVDPAVVFPFPVNKREAAVPSGGET---PRGGRR 221

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>CD63_BOVIN (Q9XSK2) CD63 antigen|
          Length = 236

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +3

Query: 219 LFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYSFLV 323
           + I VGA +F+V+  GC GA   N C +  ++  +
Sbjct: 55  VIIAVGAFLFLVAFVGCCGACKENYCLMITFAIFL 89

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>TSN17_MOUSE (Q9D7W4) Tetraspanin-17 (Tspan-17) (Transmembrane 4 superfamily|
           member 17) (Tetraspan protein SB134) (F-box only protein
           23)
          Length = 270

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +3

Query: 213 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYS 314
           ++LF+ VG V+ ++   GCIGA   NT  L  +S
Sbjct: 64  VWLFVVVGGVMSVLGFAGCIGALRENTFLLKFFS 97

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>TSN17_HUMAN (Q96FV3) Tetraspanin-17 (Tspan-17) (Transmembrane 4 superfamily|
           member 17) (Tetraspan protein SB134) (F-box only protein
           23)
          Length = 263

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +3

Query: 213 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYS 314
           ++LF+ VG V+ ++   GCIGA   NT  L  +S
Sbjct: 64  VWLFVVVGGVMSVLGFAGCIGALRENTFLLKFFS 97

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>TSN18_HUMAN (Q96SJ8) Tetraspanin-18 (Tspan-18)|
          Length = 248

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = +3

Query: 216 YLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYSFLV 323
           Y+ + +G ++F++   GC GA   N C L  +   +
Sbjct: 56  YILLAMGGLLFLLGFLGCCGAVRENKCLLLFFFLFI 91

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>RHLB_XANOR (Q5GUR8) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)|
          Length = 574

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
 Frame = -2

Query: 189 RRNXRPLQGPRPSASGGRT*VTQPAGPE-----TAVPLRHHRRSSSTP 61
           RRN RP++G  P+ +   T +  PA P       A P+R   +SS +P
Sbjct: 512 RRNGRPVEGAEPAVAS--TPIAAPAAPRKPTQVVATPVRAANKSSGSP 557

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>YGGA_AERHY (P52047) Putative amino acid transporter yggA|
          Length = 225

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +2

Query: 257 SVWLHWSRDKEYMLLVLLFFLGHIINPC*GWRC 355
           S WL  SR     LL+LL     +++PC GWRC
Sbjct: 171 SPWLARSRQGYSKLLILL-----LVSPCWGWRC 198

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>CD63_RABIT (Q28709) CD63 antigen|
          Length = 237

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +3

Query: 219 LFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYSFLV 323
           + I VGA +F+V+  GC G    N C +  ++  +
Sbjct: 55  VIIAVGAFLFLVAFVGCCGTCKENYCLMITFAIFL 89

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>CD63_HUMAN (P08962) CD63 antigen (Melanoma-associated antigen ME491)|
           (Lysosome-associated membrane glycoprotein 3) (LAMP-3)
           (Ocular melanoma-associated antigen) (OMA81H)
           (Granulophysin) (Tetraspanin-30) (Tspan-30)
          Length = 237

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +3

Query: 219 LFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYSFLV 323
           + I VG  +F+V+  GC GA   N C +  ++  +
Sbjct: 55  VIIAVGVFLFLVAFVGCCGACKENYCLMITFAIFL 89

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>MKL1_MOUSE (Q8K4J6) MKL/myocardin-like protein 1 (Myocardin-related|
           transcription factor A) (MRTF-A) (Megakaryoblastic
           leukemia 1 protein homolog) (Basic SAP coiled-coil
           transcription activator)
          Length = 964

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -1

Query: 307 QHKQHVFLVPAPMQPNRETMKITAPTP 227
           QH  +  ++PAP +P+ ET   +APTP
Sbjct: 320 QHYNYQAILPAPPKPSAETPGSSAPTP 346

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>TSN8_HUMAN (P19075) Tetraspanin-8 (Tspan-8) (Transmembrane 4 superfamily|
           member 3) (Tumor-associated antigen CO-029)
          Length = 237

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +3

Query: 219 LFIGVGAVIFIVSLFGCIGAGTRNTCCLCCY 311
           + I VGA+I I+   GC GA   + C L  +
Sbjct: 58  ILIAVGAIIMILGFLGCCGAIKESRCMLLLF 88

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>KLC_STRPU (Q05090) Kinesin light chain (KLC)|
          Length = 686

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = -2

Query: 90  RHHRRSSSTPRAGRSHS 40
           RHHRRSS TPR G + S
Sbjct: 536 RHHRRSSGTPRHGSTES 552

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>SYSM_MOUSE (Q9JJL8) Seryl-tRNA synthetase, mitochondrial precursor (EC|
           6.1.1.11) (Serine--tRNA ligase) (SerRSmt)
          Length = 518

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 18/49 (36%), Positives = 25/49 (51%)
 Frame = -1

Query: 376 WSKNMNAAPPASARINNMTKKE*QHKQHVFLVPAPMQPNRETMKITAPT 230
           ++  +NA   A  R+     +  Q K    LVPA +QP   T +ITAPT
Sbjct: 446 FAHTVNATACAVPRVLIALLESNQQKDGSVLVPAALQPYLGTDRITAPT 494

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>SPIKE_CVBLY (P25192) Spike glycoprotein precursor (Peplomer protein) (E2)|
            [Contains: Spike protein S1 (90B); Spike protein S2
            (90A)]
          Length = 1363

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 5/39 (12%)
 Frame = +3

Query: 207  WFIYLFIGVGAVIFIVSLF---GCIGAGTR--NTCCLCC 308
            W+++L IG+  V  +V LF    C G GT     C  CC
Sbjct: 1308 WYVWLLIGLAGVAMLVLLFFICCCTGCGTSCFKKCGGCC 1346

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>TSN10_HUMAN (Q9H1Z9) Tetraspanin-10 (Tspan-10) (Oculospanin)|
          Length = 355

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 18/47 (38%), Positives = 23/47 (48%)
 Frame = +3

Query: 174 GGSFFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYS 314
           G      LP    + L +G G V+   SL GC+GA   NTC L  +S
Sbjct: 109 GSDLGGPLPTDPMLGLALG-GLVVSAASLAGCLGALCENTCLLRGFS 154

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>TSN14_MOUSE (Q8QZY6) Tetraspanin-14 (Tspan-14) (Transmembrane 4 superfamily|
           member 14)
          Length = 270

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +3

Query: 213 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCL 302
           + L + VG V+F +   GC+GA   N C L
Sbjct: 62  VVLVLMVGVVMFTLGFAGCVGALRENICLL 91

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>TSN14_HUMAN (Q8NG11) Tetraspanin-14 (Tspan-14) (Transmembrane 4 superfamily|
           member 14) (DC-TM4F2)
          Length = 270

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +3

Query: 213 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCL 302
           + L + VG V+F +   GC+GA   N C L
Sbjct: 62  VVLVLMVGVVMFTLGFAGCVGALRENICLL 91

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>NIA1_SOYBN (P54233) Inducible nitrate reductase [NADH] 1 (EC 1.7.1.1) (NR)|
          Length = 886

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 21/71 (29%), Positives = 27/71 (38%)
 Frame = +2

Query: 26  PCHGRLWDLPARGVDEDLRWWRRGTAVSGPAG*VTYVRPPDADGRGPWRGRXFLRQATRS 205
           PCH  +  LP       + ++ RG A SG    VT V     DG G W+           
Sbjct: 341 PCHEEI--LPINSWTTQMPYFIRGYAYSGGGRKVTRVEVT-LDGGGTWQVCTL--DCPEK 395

Query: 206 MVHLFVHWCWC 238
                 +WCWC
Sbjct: 396 PNKYGKYWCWC 406

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>IRS1_DROME (Q9XTN2) Insulin receptor substrate 1 (Protein Chico) (dIRS)|
          Length = 968

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 15/57 (26%), Positives = 30/57 (52%)
 Frame = -1

Query: 403  STGITSFQLWSKNMNAAPPASARINNMTKKE*QHKQHVFLVPAPMQPNRETMKITAP 233
            +T ++S  L   N+N+A PA+A  +  T  +    Q++  +     P+R + +I+ P
Sbjct: 851  ATAVSSSSLTKFNINSAKPAAAADSRSTGTDPSTPQNILQIKDLNFPSRSSSRISQP 907

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>M3K2_MOUSE (Q61083) Mitogen-activated protein kinase kinase kinase 2 (EC|
           2.7.11.25) (MAPK/ERK kinase kinase 2) (MEK kinase 2)
           (MEKK 2)
          Length = 619

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
 Frame = +2

Query: 71  EDLRWWRRGTAVSGPAG*VTYVRPPDADGRGP--WRGRXFLRQATRSMVHL 217
           +D R  RRG+ +  P   VT + PP    R P  WR    L Q     V+L
Sbjct: 322 DDSRIRRRGSDIDNPTLTVTDISPPSRSPRAPTNWRLGKLLGQGAFGRVYL 372

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>CDR3_CANAL (O42690) Opaque-specific ABC transporter CDR3|
          Length = 1501

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +3

Query: 186 FDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGTRN 290
           F + P A+F YL I   + +F+  LF  IGA T +
Sbjct: 609 FKREPGAFFFYLLISFCSTLFMSHLFRTIGAFTNS 643


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,797,418
Number of Sequences: 219361
Number of extensions: 1338721
Number of successful extensions: 4437
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 4244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4430
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3072927439
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result