ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags1p13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 82 7e-13
2dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 82 7e-13
3dbj|AK059673.1| Oryza sativa (japonica cultivar-group) cDNA clon... 82 7e-13
4gb|AC136284.1| Genomic sequence for Oryza sativa, Nipponbare str... 82 7e-13
5gb|AY105638.1| Zea mays PCO080082 mRNA sequence 54 1e-04
6emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete ... 46 0.036
7emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 40 2.3
8emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete ... 40 2.3
9gb|AE011832.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 2.3
10gb|AY108647.1| Zea mays PCO081040 mRNA sequence 40 2.3
11ref|XM_522800.1| PREDICTED: Pan troglodytes similar to cadherin-... 38 8.9
12ref|NM_022478.2| Homo sapiens cadherin-like 24 (CDH24), transcri... 38 8.9
13ref|NM_144985.2| Homo sapiens cadherin-like 24 (CDH24), transcri... 38 8.9
14gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 38 8.9
15gb|BC069190.1| Homo sapiens cDNA clone IMAGE:4891825, containing... 38 8.9
16gb|AY358199.1| Homo sapiens clone DNA203532 CDH24 (UNQ2834) mRNA... 38 8.9
17gb|BC019067.2| Homo sapiens cadherin-like 24, mRNA (cDNA clone I... 38 8.9
18gb|L02630.5| Xanthomonas campestris XpsE (xpsE), XpsF (xpsF), Xp... 38 8.9
19gb|BC009332.2| Homo sapiens cadherin-like 24, mRNA (cDNA clone I... 38 8.9
20emb|X59079.1|XCXPSGEN X.campestris xps E, F, G, H, I, and J gen... 38 8.9
21gb|AC138364.8| Mus musculus chromosome 7, clone RP23-243D10, com... 38 8.9
22gb|AF501263.1| Erwinia chrysanthemi phospholipase C (plcA) gene,... 38 8.9
23gb|AY260901.1| Homo sapiens cadherin-24 variant mRNA, complete c... 38 8.9
24gb|AY260900.1| Homo sapiens cadherin-24 mRNA, complete cds; alte... 38 8.9
25gb|AE008813.1| Salmonella typhimurium LT2, section 117 of 220 of... 38 8.9
26emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 38 8.9
27emb|AL627275.1| Salmonella enterica serovar Typhi (Salmonella ty... 38 8.9
28emb|AL137477.1|HSM802201 Homo sapiens mRNA; cDNA DKFZp434K2323 (... 38 8.9
29emb|AJ575648.1|STH575648 Streptomyces thioluteus aureothin biosy... 38 8.9
30emb|CR857974.1| Pongo pygmaeus mRNA; cDNA DKFZp469F0213 (from cl... 38 8.9
31emb|CR847811.1| Human DNA sequence from clone XX-NCIH2171_5AI03,... 38 8.9
32emb|CR847576.1| Human DNA sequence from clone XX-NCIH2171_5M12, ... 38 8.9
33gb|AF403392.1| Grass carp reovirus strain GCRV-873 segment 6 put... 38 8.9
34emb|CR623889.1| full-length cDNA clone CS0DC009YG17 of Neuroblas... 38 8.9
35emb|CR617589.1| full-length cDNA clone CS0DI018YJ12 of Placenta ... 38 8.9
36gb|AE012165.1| Xanthomonas campestris pv. campestris str. ATCC 3... 38 8.9
37gb|AF239175.1|AF239175 Grass carp hemorrhagic virus segment M6 o... 38 8.9
38gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 38 8.9
39gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 38 8.9
40dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 38 8.9
41gb|AF140550.2| Salmonella typhimurium exonuclease VII (xseA), Sh... 38 8.9
42gb|CP000026.1| Salmonella enterica subsp. enterica serovar Parat... 38 8.9
43dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome 38 8.9
44dbj|AK025342.1| Homo sapiens cDNA: FLJ21689 fis, clone COL09459 38 8.9
45gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi... 38 8.9
46emb|AL132780.5|CNS01DTK Human chromosome 14 DNA sequence BAC R-2... 38 8.9
47gb|AE017220.1| Salmonella enterica subsp. enterica serovar Chole... 38 8.9
48emb|BX248303.1|CNSLT1I7A human full-length cDNA clone CS0DK003YO... 38 8.9
49dbj|AB018557.1| Streptomyces griseus cyaA gene for adenylate cyc... 38 8.9 
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 81.8 bits (41), Expect = 7e-13
 Identities = 47/49 (95%)
 Strand = Plus / Minus

                                                                 
Query: 123      cggcggtggatgtcgtcggaggacgccaaggggtcgttcctagacaagg 171
                ||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 13234856 cggcggtggatgtcgtcggaggaggccaaggggtcgttcctggacaagg 13234808



 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 46/49 (93%)
 Strand = Plus / Minus

                                                                 
Query: 123      cggcggtggatgtcgtcggaggacgccaaggggtcgttcctagacaagg 171
                |||| |||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 13250744 cggcagtggatgtcgtcggaggaggccaaggggtcgttcctggacaagg 13250696
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 81.8 bits (41), Expect = 7e-13
 Identities = 47/49 (95%)
 Strand = Plus / Minus

                                                                 
Query: 123      cggcggtggatgtcgtcggaggacgccaaggggtcgttcctagacaagg 171
                ||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 13231631 cggcggtggatgtcgtcggaggaggccaaggggtcgttcctggacaagg 13231583



 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 46/49 (93%)
 Strand = Plus / Minus

                                                                 
Query: 123      cggcggtggatgtcgtcggaggacgccaaggggtcgttcctagacaagg 171
                |||| |||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 13247519 cggcagtggatgtcgtcggaggaggccaaggggtcgttcctggacaagg 13247471
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>dbj|AK059673.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-G02, full
           insert sequence
          Length = 761

 Score = 81.8 bits (41), Expect = 7e-13
 Identities = 47/49 (95%)
 Strand = Plus / Plus

                                                            
Query: 123 cggcggtggatgtcgtcggaggacgccaaggggtcgttcctagacaagg 171
           ||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 232 cggcggtggatgtcgtcggaggaggccaaggggtcgttcctggacaagg 280
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>gb|AC136284.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1739D07,
             from chromosome 3, complete sequence
          Length = 149539

 Score = 81.8 bits (41), Expect = 7e-13
 Identities = 47/49 (95%)
 Strand = Plus / Plus

                                                              
Query: 123   cggcggtggatgtcgtcggaggacgccaaggggtcgttcctagacaagg 171
             ||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 84985 cggcggtggatgtcgtcggaggaggccaaggggtcgttcctggacaagg 85033



 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 46/49 (93%)
 Strand = Plus / Plus

                                                              
Query: 123   cggcggtggatgtcgtcggaggacgccaaggggtcgttcctagacaagg 171
             |||| |||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 69097 cggcagtggatgtcgtcggaggaggccaaggggtcgttcctggacaagg 69145
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>gb|AY105638.1| Zea mays PCO080082 mRNA sequence
          Length = 665

 Score = 54.0 bits (27), Expect = 1e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                              
Query: 113 cctgtcggggcggcggtggatgtcgtcggaggacgccaaggggtcgttcct 163
           ||||| ||||| |||||||||||| |||||||| |||||||| || |||||
Sbjct: 195 cctgtgggggcagcggtggatgtcttcggaggatgccaagggctctttcct 245
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>emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete genome; segment 21/29
          Length = 308050

 Score = 46.1 bits (23), Expect = 0.036
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 121   ggcggcggtggatgtcgtcggag 143
             |||||||||||||||||||||||
Sbjct: 12242 ggcggcggtggatgtcgtcggag 12220
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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 86      caggctggcagcggcgctgc 105
               ||||||||||||||||||||
Sbjct: 2307867 caggctggcagcggcgctgc 2307886
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>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29
          Length = 314100

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 68     cgcgtcgtcggtgtccgtca 87
              ||||||||||||||||||||
Sbjct: 229113 cgcgtcgtcggtgtccgtca 229132
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>gb|AE011832.1| Xanthomonas axonopodis pv. citri str. 306,  section 210 of 469 of the
             complete genome
          Length = 13074

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 86    caggctggcagcggcgctgc 105
             ||||||||||||||||||||
Sbjct: 12466 caggctggcagcggcgctgc 12485
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>gb|AY108647.1| Zea mays PCO081040 mRNA sequence
          Length = 758

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 150 aaggggtcgttcctagacaaggaagaggtcgc 181
           |||||||||||||| |||||||  ||||||||
Sbjct: 224 aaggggtcgttcctcgacaagggcgaggtcgc 255
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>ref|XM_522800.1| PREDICTED: Pan troglodytes similar to cadherin-like 24 (LOC467403),
            mRNA
          Length = 3498

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 82   ccgtcaggctggcagcggc 100
            |||||||||||||||||||
Sbjct: 2900 ccgtcaggctggcagcggc 2882
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>ref|NM_022478.2| Homo sapiens cadherin-like 24 (CDH24), transcript variant 1, mRNA
          Length = 2873

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 82   ccgtcaggctggcagcggc 100
            |||||||||||||||||||
Sbjct: 1955 ccgtcaggctggcagcggc 1937
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>ref|NM_144985.2| Homo sapiens cadherin-like 24 (CDH24), transcript variant 2, mRNA
          Length = 2759

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 82   ccgtcaggctggcagcggc 100
            |||||||||||||||||||
Sbjct: 1841 ccgtcaggctggcagcggc 1823
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                     
Query: 15      cgtcggcggcgaggnaaccttg 36
               |||||||||||||| |||||||
Sbjct: 1686806 cgtcggcggcgaggaaaccttg 1686827
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>gb|BC069190.1| Homo sapiens cDNA clone IMAGE:4891825, containing frame-shift
           errors
          Length = 1634

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 82  ccgtcaggctggcagcggc 100
           |||||||||||||||||||
Sbjct: 165 ccgtcaggctggcagcggc 147
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>gb|AY358199.1| Homo sapiens clone DNA203532 CDH24 (UNQ2834) mRNA, complete cds
          Length = 3391

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 82   ccgtcaggctggcagcggc 100
            |||||||||||||||||||
Sbjct: 1964 ccgtcaggctggcagcggc 1946
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>gb|BC019067.2| Homo sapiens cadherin-like 24, mRNA (cDNA clone IMAGE:4896489),
           complete cds
          Length = 1642

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 82  ccgtcaggctggcagcggc 100
           |||||||||||||||||||
Sbjct: 165 ccgtcaggctggcagcggc 147
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>gb|L02630.5| Xanthomonas campestris XpsE (xpsE), XpsF (xpsF), XpsG (xpsG), XpsH
            (xpsH), XpsI (xpsI), XpsJ (xpsJ), XpsK (xpsK), and XpsL
            (xpsL) genes, complete cds
          Length = 7813

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 98   ggcgctgcagggtgtcctg 116
            |||||||||||||||||||
Sbjct: 2821 ggcgctgcagggtgtcctg 2803
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>gb|BC009332.2| Homo sapiens cadherin-like 24, mRNA (cDNA clone IMAGE:4126701),
           complete cds
          Length = 1641

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 82  ccgtcaggctggcagcggc 100
           |||||||||||||||||||
Sbjct: 165 ccgtcaggctggcagcggc 147
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>emb|X59079.1|XCXPSGEN X.campestris xps E, F, G, H, I, and  J genes for protein secretion
            and pathogenicity functions
          Length = 5324

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 98   ggcgctgcagggtgtcctg 116
            |||||||||||||||||||
Sbjct: 2764 ggcgctgcagggtgtcctg 2746
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>gb|AC138364.8| Mus musculus chromosome 7, clone RP23-243D10, complete sequence
          Length = 199717

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 32     ccttgtgctacggcacctt 50
              |||||||||||||||||||
Sbjct: 187970 ccttgtgctacggcacctt 187988
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>gb|AF501263.1| Erwinia chrysanthemi phospholipase C (plcA) gene, partial cds; and HrpF
             (hrpF), HrpG (hrpG), HrcC (hrcC), HrpT (hrpT), HrpV
             (hrpV), HrpN harpin (hrpN), ORF1, HecB (hecB), and
             hemolysin/hemagglutinin-like protein HecA (hecA) genes,
             complete cds
          Length = 18931

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 96    gcggcgctgcagggtgtcctgtcgggg 122
             ||||||||||||||||| ||| |||||
Sbjct: 17715 gcggcgctgcagggtgtgctggcgggg 17741
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>gb|AY260901.1| Homo sapiens cadherin-24 variant mRNA, complete cds; alternatively
            spliced
          Length = 2873

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 82   ccgtcaggctggcagcggc 100
            |||||||||||||||||||
Sbjct: 1955 ccgtcaggctggcagcggc 1937
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>gb|AY260900.1| Homo sapiens cadherin-24 mRNA, complete cds; alternatively spliced
          Length = 2759

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 82   ccgtcaggctggcagcggc 100
            |||||||||||||||||||
Sbjct: 1841 ccgtcaggctggcagcggc 1823
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>gb|AE008813.1| Salmonella typhimurium LT2, section 117 of 220 of the complete genome
          Length = 21009

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 83    cgtcaggctggcagcggcgctgc 105
             |||||||||||| ||||||||||
Sbjct: 16133 cgtcaggctggcggcggcgctgc 16155
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                     
Query: 15      cgtcggcggcgaggnaaccttg 36
               |||||||||||||| |||||||
Sbjct: 3021768 cgtcggcggcgaggaaaccttg 3021789
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>emb|AL627275.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18,
             complete chromosome; segment 11/20
          Length = 145050

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 83    cgtcaggctggcagcggcgctgc 105
             |||||||||||| ||||||||||
Sbjct: 43498 cgtcaggctggcggcggcgctgc 43520
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>emb|AL137477.1|HSM802201 Homo sapiens mRNA; cDNA DKFZp434K2323 (from clone DKFZp434K2323);
           partial cds
          Length = 2014

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 82  ccgtcaggctggcagcggc 100
           |||||||||||||||||||
Sbjct: 581 ccgtcaggctggcagcggc 563
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>emb|AJ575648.1|STH575648 Streptomyces thioluteus aureothin biosynthesis gene cluster
             (aurABCDEFGHI genes), strain HKI-22
          Length = 29132

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 71    gtcgtcggtgtccgtcagg 89
             |||||||||||||||||||
Sbjct: 24926 gtcgtcggtgtccgtcagg 24908
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>emb|CR857974.1| Pongo pygmaeus mRNA; cDNA DKFZp469F0213 (from clone DKFZp469F0213)
          Length = 4119

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 88   ggctggcagcggcgctgca 106
            |||||||||||||||||||
Sbjct: 2664 ggctggcagcggcgctgca 2682
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>emb|CR847811.1| Human DNA sequence from clone XX-NCIH2171_5AI03, complete sequence
          Length = 109177

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 82    ccgtcaggctggcagcggc 100
             |||||||||||||||||||
Sbjct: 45577 ccgtcaggctggcagcggc 45559
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>emb|CR847576.1| Human DNA sequence from clone XX-NCIH2171_5M12, complete sequence
          Length = 98856

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 82    ccgtcaggctggcagcggc 100
             |||||||||||||||||||
Sbjct: 48751 ccgtcaggctggcagcggc 48733
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>gb|AF403392.1| Grass carp reovirus strain GCRV-873 segment 6 putative outer capsid
           VP4 gene, complete cds
          Length = 2039

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 118 cggggcggcggtggatgtc 136
           |||||||||||||||||||
Sbjct: 126 cggggcggcggtggatgtc 108
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>emb|CR623889.1| full-length cDNA clone CS0DC009YG17 of Neuroblastoma Cot
           25-normalized of Homo sapiens (human)
          Length = 1636

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 82  ccgtcaggctggcagcggc 100
           |||||||||||||||||||
Sbjct: 378 ccgtcaggctggcagcggc 360
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>emb|CR617589.1| full-length cDNA clone CS0DI018YJ12 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1467

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 82  ccgtcaggctggcagcggc 100
           |||||||||||||||||||
Sbjct: 58  ccgtcaggctggcagcggc 40
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>gb|AE012165.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 73 of
            460 of the complete genome
          Length = 11416

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 98   ggcgctgcagggtgtcctg 116
            |||||||||||||||||||
Sbjct: 2501 ggcgctgcagggtgtcctg 2483
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>gb|AF239175.1|AF239175 Grass carp hemorrhagic virus segment M6 outer capsid protein VP5
           gene, complete cds
          Length = 2039

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 118 cggggcggcggtggatgtc 136
           |||||||||||||||||||
Sbjct: 126 cggggcggcggtggatgtc 108
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>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 98      ggcgctgcagggtgtcctg 116
               |||||||||||||||||||
Sbjct: 4239026 ggcgctgcagggtgtcctg 4239044
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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                     
Query: 15      cgtcggcggcgaggnaaccttg 36
               |||||||||||||| |||||||
Sbjct: 2170583 cgtcggcggcgaggaaaccttg 2170604
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 121     ggcggcggtggatgtcgtc 139
               |||||||||||||||||||
Sbjct: 3366116 ggcggcggtggatgtcgtc 3366134
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>gb|AF140550.2| Salmonella typhimurium exonuclease VII (xseA), ShdA (shdA), RatC
            (ratC), RatB (ratB), RatA (ratA), SinI (sinI), and SinH
            (sinH) genes, complete cds; and YfgK (yfgK) gene, partial
            cds
          Length = 25252

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 83   cgtcaggctggcagcggcgctgc 105
            |||||||||||| ||||||||||
Sbjct: 9938 cgtcaggctggcggcggcgctgc 9960
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>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150
          Length = 4585229

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 83     cgtcaggctggcagcggcgctgc 105
              |||||||||||| ||||||||||
Sbjct: 410201 cgtcaggctggcggcggcgctgc 410179
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>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome
          Length = 5277274

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 38      gctacggcaccttcgcttg 56
               |||||||||||||||||||
Sbjct: 3407593 gctacggcaccttcgcttg 3407575
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>dbj|AK025342.1| Homo sapiens cDNA: FLJ21689 fis, clone COL09459
          Length = 1877

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 82  ccgtcaggctggcagcggc 100
           |||||||||||||||||||
Sbjct: 426 ccgtcaggctggcagcggc 408
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>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome
          Length = 4791961

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 83     cgtcaggctggcagcggcgctgc 105
              |||||||||||| ||||||||||
Sbjct: 404351 cgtcaggctggcggcggcgctgc 404329
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>emb|AL132780.5|CNS01DTK Human chromosome 14 DNA sequence BAC R-298I3 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 191946

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 82     ccgtcaggctggcagcggc 100
              |||||||||||||||||||
Sbjct: 152922 ccgtcaggctggcagcggc 152940
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>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67,
               complete genome
          Length = 4755700

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 83      cgtcaggctggcagcggcgctgc 105
               |||||||||||| ||||||||||
Sbjct: 2657629 cgtcaggctggcggcggcgctgc 2657651
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>emb|BX248303.1|CNSLT1I7A human full-length cDNA clone CS0DK003YO17 of HeLa cells of Homo
            sapiens (human)
          Length = 1110

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 82   ccgtcaggctggcagcggc 100
            |||||||||||||||||||
Sbjct: 1032 ccgtcaggctggcagcggc 1014
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>dbj|AB018557.1| Streptomyces griseus cyaA gene for adenylate cyclase, complete cds
          Length = 2955

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 56   ggccgcggtccccgcgtcgtcgg 78
            ||||||||| |||||||||||||
Sbjct: 2412 ggccgcggtgcccgcgtcgtcgg 2390


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 977,601
Number of Sequences: 3902068
Number of extensions: 977601
Number of successful extensions: 72805
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71647
Number of HSP's gapped (non-prelim): 1158
length of query: 181
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 159
effective length of database: 17,147,199,772
effective search space: 2726404763748
effective search space used: 2726404763748
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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