ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags1o21 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK071807.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023110A09, full insert sequence Length = 2197 Score = 743 bits (375), Expect = 0.0 Identities = 581/648 (89%), Gaps = 2/648 (0%) Strand = Plus / Plus Query: 1 gggtggccgaccgnngtgcagcacgtggcgcatgtcacctttgctaggttccatggnatt 60 ||||||||||| | |||||||||||||| || |||||||| | ||||||||||| ||| Sbjct: 772 gggtggccgacggatgtgcagcacgtggcacacgtcaccttcgacaggttccatgg-att 830 Query: 61 ccttgggctgcccgtcgagttcgagcccgaggtgcctcgccgcgctcccagcgccagtgc 120 ||| || || ||||| ||| ||||||||||||| || ||||| |||||||| || ||||| Sbjct: 831 cctcggcctccccgtggagctcgagcccgaggttccccgccgggctcccagtgcgagtgc 890 Query: 121 aagtgtctttggagtttcaacaggaatcaatgcagtgttcctacgattccagaggaaaca 180 |||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||| Sbjct: 891 aagtgtctttggcgtttcaacag-aatcaatgcaatgttcctacgattccagaggaaaca 949 Query: 181 gtgttccgacaattctcttgatgatgcagagacgtctttatgaacaatgtggtcttcggg 240 |||| || || ||||||||||||||||| |||||||||||||||||| | |||||||||| Sbjct: 950 gtgtaccaacgattctcttgatgatgcaaagacgtctttatgaacaaggcggtcttcggg 1009 Query: 241 cagaaggtatttttcgtataaatgcagagaatagccaggaggagcttgtgagagaccggt 300 |||||||||||||||||||||||||||||||||||||||||||| |||||||||| | || Sbjct: 1010 cagaaggtatttttcgtataaatgcagagaatagccaggaggagtttgtgagagatcagt 1069 Query: 301 taaacagcggaatcgtgccatatggtattgatgtccactgtttgtcaggtctaataaaag 360 |||| || ||||| ||||| |||| |||||| | |||||||||||||||||||| |||| Sbjct: 1070 taaatagtggaattgtgccggatggcattgatattcactgtttgtcaggtctaatcaaag 1129 Query: 361 catggtttagagaactgccaagcggggtgctggaccctattccacctgaacaggtgatgc 420 | |||||||| |||||||| || ||||||||||| |||| ||||||||||||||||||| Sbjct: 1130 cctggtttagggaactgccgagtggggtgctggattctatcccacctgaacaggtgatgc 1189 Query: 421 aatgccaatctgaagaggattgtgctcgggtcgccaaatgccttccagtagctgaagcgg 480 |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| | Sbjct: 1190 aatgccaatctgaagaggattgtgctcgagtcgccaaatgccttccaccagctgaagcag 1249 Query: 481 ccttacttgactgggccgttaatctgatggctgatgtcgtacaagaagaaaagataaaca 540 | |||||||| ||||| |||||| | ||||||||||| || ||||||||| ||||||||| Sbjct: 1250 ctttacttgagtgggcagttaatttaatggctgatgttgtccaagaagaacagataaaca 1309 Query: 541 agatgaatgctcgcaacattgctatggtttttgcaccaaatatgactcanatggcagatc 600 ||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 1310 agatgaatgctcgtaacattgctatggtttttgcaccaaatatgactcagatgtcagatc 1369 Query: 601 ctttgactgcactcatgtatgcagtccaagtgatgaattttctcaaga 648 | ||||| ||||| |||||||| || |||||||||||||||||||||| Sbjct: 1370 cattgaccgcactgatgtatgcggtgcaagtgatgaattttctcaaga 1417
>dbj|AK067300.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106C08, full insert sequence Length = 1998 Score = 416 bits (210), Expect = e-113 Identities = 324/360 (90%), Gaps = 2/360 (0%) Strand = Plus / Plus Query: 1 gggtggccgaccgnngtgcagcacgtggcgcatgtcacctttgctaggttccatggnatt 60 ||||||||||| | ||||||||||||||||| |||||||| | |||||||||||| ||| Sbjct: 203 gggtggccgacggacgtgcagcacgtggcgcacgtcaccttcgataggttccatgg-att 261 Query: 61 ccttgggctgcccgtcgagttcgagcccgaggtgcctcgccgcgctcccagcgccagtgc 120 ||| ||||| ||||| |||||||||||||||||||| |||||||||||||| || ||||| Sbjct: 262 cctcgggctccccgtggagttcgagcccgaggtgccccgccgcgctcccagtgcgagtgc 321 Query: 121 aagtgtctttggagtttcaacaggaatcaatgcagtgttcctacgattccagaggaaaca 180 ||||||||||||||||||||||| |||| |||||||| ||||| |||||||||||||||| Sbjct: 322 aagtgtctttggagtttcaacag-aatcgatgcagtgctcctatgattccagaggaaaca 380 Query: 181 gtgttccgacaattctcttgatgatgcagagacgtctttatgaacaatgtggtcttcggg 240 |||| || |||||||||||||||||||| |||||||||||||||||| | |||||||||| Sbjct: 381 gtgtcccaacaattctcttgatgatgcaaagacgtctttatgaacaaggcggtcttcggg 440 Query: 241 cagaaggtatttttcgtataaatgcagagaatagccaggaggagcttgtgagagaccggt 300 |||||||||||||||| |||| ||||||||||||||| || |||||||||||||||| | Sbjct: 441 cagaaggtatttttcgcataagtgcagagaatagccaagaagagcttgtgagagaccaat 500 Query: 301 taaacagcggaatcgtgccatatggtattgatgtccactgtttgtcaggtctaataaaag 360 |||| | || ||||||||| | ||||||||||||||||||||| |||||||||| |||| Sbjct: 501 taaatggtgggatcgtgccagagggtattgatgtccactgtttggcaggtctaatcaaag 560 Score = 315 bits (159), Expect = 1e-82 Identities = 254/286 (88%) Strand = Plus / Plus Query: 363 tggtttagagaactgccaagcggggtgctggaccctattccacctgaacaggtgatgcaa 422 |||||||| ||||| || || |||||||||||| | || ||||||||||||||||||||| Sbjct: 928 tggtttagggaactcccgagtggggtgctggactcaatcccacctgaacaggtgatgcaa 987 Query: 423 tgccaatctgaagaggattgtgctcgggtcgccaaatgccttccagtagctgaagcggcc 482 ||||| ||||||||||| |||||||| || ||||||||||||||| | ||||||| ||| Sbjct: 988 tgccagtctgaagaggactgtgctcgtgttgccaaatgccttccaccaactgaagcagcc 1047 Query: 483 ttacttgactgggccgttaatctgatggctgatgtcgtacaagaagaaaagataaacaag 542 ||||| |||||||| |||||| ||||||||||||| || |||||||| | ||||||||| Sbjct: 1048 ttactagactgggctgttaatttgatggctgatgttgtccaagaagagcaaataaacaag 1107 Query: 543 atgaatgctcgcaacattgctatggtttttgcaccaaatatgactcanatggcagatcct 602 |||||||| ||||| ||||| |||||||||||||||||||||||||| ||||||||||| Sbjct: 1108 atgaatgcgcgcaatattgccatggtttttgcaccaaatatgactcagatggcagatccc 1167 Query: 603 ttgactgcactcatgtatgcagtccaagtgatgaattttctcaaga 648 ||||||||| | ||||||||||| ||||||||||||||||| |||| Sbjct: 1168 ttgactgcattgatgtatgcagtacaagtgatgaattttcttaaga 1213
>gb|AC138196.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0032M21 map C83B, complete sequence Length = 48636 Score = 299 bits (151), Expect = 6e-78 Identities = 208/227 (91%) Strand = Plus / Plus Query: 363 tggtttagagaactgccaagcggggtgctggaccctattccacctgaacaggtgatgcaa 422 |||||||| |||||||| || ||||||||||| |||| ||||||||||||||||||||| Sbjct: 21340 tggtttagggaactgccgagtggggtgctggattctatcccacctgaacaggtgatgcaa 21399 Query: 423 tgccaatctgaagaggattgtgctcgggtcgccaaatgccttccagtagctgaagcggcc 482 |||||||||||||||||||||||||| |||||||||||||||||| ||||||||| || Sbjct: 21400 tgccaatctgaagaggattgtgctcgagtcgccaaatgccttccaccagctgaagcagct 21459 Query: 483 ttacttgactgggccgttaatctgatggctgatgtcgtacaagaagaaaagataaacaag 542 |||||||| ||||| |||||| | ||||||||||| || ||||||||| ||||||||||| Sbjct: 21460 ttacttgagtgggcagttaatttaatggctgatgttgtccaagaagaacagataaacaag 21519 Query: 543 atgaatgctcgcaacattgctatggtttttgcaccaaatatgactca 589 ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 21520 atgaatgctcgtaacattgctatggtttttgcaccaaatatgactca 21566 Score = 170 bits (86), Expect = 4e-39 Identities = 117/126 (92%), Gaps = 1/126 (0%) Strand = Plus / Plus Query: 115 cagtgcaagtgtctttggagtttcaacaggaatcaatgcagtgttcctacgattccagag 174 |||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||| Sbjct: 20499 cagtgcaagtgtctttggcgtttcaacag-aatcaatgcaatgttcctacgattccagag 20557 Query: 175 gaaacagtgttccgacaattctcttgatgatgcagagacgtctttatgaacaatgtggtc 234 |||||||||| || || ||||||||||||||||| |||||||||||||||||| | |||| Sbjct: 20558 gaaacagtgtaccaacgattctcttgatgatgcaaagacgtctttatgaacaaggcggtc 20617 Query: 235 ttcggg 240 |||||| Sbjct: 20618 ttcggg 20623 Score = 147 bits (74), Expect = 5e-32 Identities = 110/122 (90%) Strand = Plus / Plus Query: 239 ggcagaaggtatttttcgtataaatgcagagaatagccaggaggagcttgtgagagaccg 298 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct: 20746 ggcagaaggtatttttcgtataaatgcagagaatagccaggaggagtttgtgagagatca 20805 Query: 299 gttaaacagcggaatcgtgccatatggtattgatgtccactgtttgtcaggtctaataaa 358 |||||| || ||||| ||||| |||| |||||| | |||||||||||||||||||| || Sbjct: 20806 gttaaatagtggaattgtgccggatggcattgatattcactgtttgtcaggtctaatcaa 20865 Query: 359 ag 360 || Sbjct: 20866 ag 20867 Score = 81.8 bits (41), Expect = 3e-12 Identities = 94/111 (84%), Gaps = 1/111 (0%) Strand = Plus / Plus Query: 1 gggtggccgaccgnngtgcagcacgtggcgcatgtcacctttgctaggttccatggnatt 60 ||||||||||| | |||||||||||||| || |||||||| | ||||||||||| ||| Sbjct: 18456 gggtggccgacggatgtgcagcacgtggcacacgtcaccttcgacaggttccatgg-att 18514 Query: 61 ccttgggctgcccgtcgagttcgagcccgaggtgcctcgccgcgctcccag 111 ||| || || ||||| ||| ||||||||||||| || ||||| |||||||| Sbjct: 18515 cctcggcctccccgtggagctcgagcccgaggttccccgccgggctcccag 18565 Score = 67.9 bits (34), Expect = 4e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 595 cagatcctttgactgcactcatgtatgcagtccaagtgatgaattttctcaaga 648 ||||||| ||||| ||||| |||||||| || |||||||||||||||||||||| Sbjct: 21649 cagatccattgaccgcactgatgtatgcggtgcaagtgatgaattttctcaaga 21702
>gb|AC116949.11| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0040B10 map R2918, complete sequence Length = 149132 Score = 299 bits (151), Expect = 6e-78 Identities = 208/227 (91%) Strand = Plus / Plus Query: 363 tggtttagagaactgccaagcggggtgctggaccctattccacctgaacaggtgatgcaa 422 |||||||| |||||||| || ||||||||||| |||| ||||||||||||||||||||| Sbjct: 138997 tggtttagggaactgccgagtggggtgctggattctatcccacctgaacaggtgatgcaa 139056 Query: 423 tgccaatctgaagaggattgtgctcgggtcgccaaatgccttccagtagctgaagcggcc 482 |||||||||||||||||||||||||| |||||||||||||||||| ||||||||| || Sbjct: 139057 tgccaatctgaagaggattgtgctcgagtcgccaaatgccttccaccagctgaagcagct 139116 Query: 483 ttacttgactgggccgttaatctgatggctgatgtcgtacaagaagaaaagataaacaag 542 |||||||| ||||| |||||| | ||||||||||| || ||||||||| ||||||||||| Sbjct: 139117 ttacttgagtgggcagttaatttaatggctgatgttgtccaagaagaacagataaacaag 139176 Query: 543 atgaatgctcgcaacattgctatggtttttgcaccaaatatgactca 589 ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 139177 atgaatgctcgtaacattgctatggtttttgcaccaaatatgactca 139223 Score = 170 bits (86), Expect = 4e-39 Identities = 117/126 (92%), Gaps = 1/126 (0%) Strand = Plus / Plus Query: 115 cagtgcaagtgtctttggagtttcaacaggaatcaatgcagtgttcctacgattccagag 174 |||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||| Sbjct: 138156 cagtgcaagtgtctttggcgtttcaacag-aatcaatgcaatgttcctacgattccagag 138214 Query: 175 gaaacagtgttccgacaattctcttgatgatgcagagacgtctttatgaacaatgtggtc 234 |||||||||| || || ||||||||||||||||| |||||||||||||||||| | |||| Sbjct: 138215 gaaacagtgtaccaacgattctcttgatgatgcaaagacgtctttatgaacaaggcggtc 138274 Query: 235 ttcggg 240 |||||| Sbjct: 138275 ttcggg 138280 Score = 147 bits (74), Expect = 5e-32 Identities = 110/122 (90%) Strand = Plus / Plus Query: 239 ggcagaaggtatttttcgtataaatgcagagaatagccaggaggagcttgtgagagaccg 298 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct: 138403 ggcagaaggtatttttcgtataaatgcagagaatagccaggaggagtttgtgagagatca 138462 Query: 299 gttaaacagcggaatcgtgccatatggtattgatgtccactgtttgtcaggtctaataaa 358 |||||| || ||||| ||||| |||| |||||| | |||||||||||||||||||| || Sbjct: 138463 gttaaatagtggaattgtgccggatggcattgatattcactgtttgtcaggtctaatcaa 138522 Query: 359 ag 360 || Sbjct: 138523 ag 138524 Score = 81.8 bits (41), Expect = 3e-12 Identities = 94/111 (84%), Gaps = 1/111 (0%) Strand = Plus / Plus Query: 1 gggtggccgaccgnngtgcagcacgtggcgcatgtcacctttgctaggttccatggnatt 60 ||||||||||| | |||||||||||||| || |||||||| | ||||||||||| ||| Sbjct: 136113 gggtggccgacggatgtgcagcacgtggcacacgtcaccttcgacaggttccatgg-att 136171 Query: 61 ccttgggctgcccgtcgagttcgagcccgaggtgcctcgccgcgctcccag 111 ||| || || ||||| ||| ||||||||||||| || ||||| |||||||| Sbjct: 136172 cctcggcctccccgtggagctcgagcccgaggttccccgccgggctcccag 136222 Score = 67.9 bits (34), Expect = 4e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 595 cagatcctttgactgcactcatgtatgcagtccaagtgatgaattttctcaaga 648 ||||||| ||||| ||||| |||||||| || |||||||||||||||||||||| Sbjct: 139306 cagatccattgaccgcactgatgtatgcggtgcaagtgatgaattttctcaaga 139359
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 299 bits (151), Expect = 6e-78 Identities = 208/227 (91%) Strand = Plus / Plus Query: 363 tggtttagagaactgccaagcggggtgctggaccctattccacctgaacaggtgatgcaa 422 |||||||| |||||||| || ||||||||||| |||| ||||||||||||||||||||| Sbjct: 2486900 tggtttagggaactgccgagtggggtgctggattctatcccacctgaacaggtgatgcaa 2486959 Query: 423 tgccaatctgaagaggattgtgctcgggtcgccaaatgccttccagtagctgaagcggcc 482 |||||||||||||||||||||||||| |||||||||||||||||| ||||||||| || Sbjct: 2486960 tgccaatctgaagaggattgtgctcgagtcgccaaatgccttccaccagctgaagcagct 2487019 Query: 483 ttacttgactgggccgttaatctgatggctgatgtcgtacaagaagaaaagataaacaag 542 |||||||| ||||| |||||| | ||||||||||| || ||||||||| ||||||||||| Sbjct: 2487020 ttacttgagtgggcagttaatttaatggctgatgttgtccaagaagaacagataaacaag 2487079 Query: 543 atgaatgctcgcaacattgctatggtttttgcaccaaatatgactca 589 ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 2487080 atgaatgctcgtaacattgctatggtttttgcaccaaatatgactca 2487126 Score = 170 bits (86), Expect = 4e-39 Identities = 117/126 (92%), Gaps = 1/126 (0%) Strand = Plus / Plus Query: 115 cagtgcaagtgtctttggagtttcaacaggaatcaatgcagtgttcctacgattccagag 174 |||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||| Sbjct: 2486059 cagtgcaagtgtctttggcgtttcaacag-aatcaatgcaatgttcctacgattccagag 2486117 Query: 175 gaaacagtgttccgacaattctcttgatgatgcagagacgtctttatgaacaatgtggtc 234 |||||||||| || || ||||||||||||||||| |||||||||||||||||| | |||| Sbjct: 2486118 gaaacagtgtaccaacgattctcttgatgatgcaaagacgtctttatgaacaaggcggtc 2486177 Query: 235 ttcggg 240 |||||| Sbjct: 2486178 ttcggg 2486183 Score = 147 bits (74), Expect = 5e-32 Identities = 110/122 (90%) Strand = Plus / Plus Query: 239 ggcagaaggtatttttcgtataaatgcagagaatagccaggaggagcttgtgagagaccg 298 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct: 2486306 ggcagaaggtatttttcgtataaatgcagagaatagccaggaggagtttgtgagagatca 2486365 Query: 299 gttaaacagcggaatcgtgccatatggtattgatgtccactgtttgtcaggtctaataaa 358 |||||| || ||||| ||||| |||| |||||| | |||||||||||||||||||| || Sbjct: 2486366 gttaaatagtggaattgtgccggatggcattgatattcactgtttgtcaggtctaatcaa 2486425 Query: 359 ag 360 || Sbjct: 2486426 ag 2486427 Score = 81.8 bits (41), Expect = 3e-12 Identities = 94/111 (84%), Gaps = 1/111 (0%) Strand = Plus / Plus Query: 1 gggtggccgaccgnngtgcagcacgtggcgcatgtcacctttgctaggttccatggnatt 60 ||||||||||| | |||||||||||||| || |||||||| | ||||||||||| ||| Sbjct: 2484016 gggtggccgacggatgtgcagcacgtggcacacgtcaccttcgacaggttccatgg-att 2484074 Query: 61 ccttgggctgcccgtcgagttcgagcccgaggtgcctcgccgcgctcccag 111 ||| || || ||||| ||| ||||||||||||| || ||||| |||||||| Sbjct: 2484075 cctcggcctccccgtggagctcgagcccgaggttccccgccgggctcccag 2484125 Score = 67.9 bits (34), Expect = 4e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 595 cagatcctttgactgcactcatgtatgcagtccaagtgatgaattttctcaaga 648 ||||||| ||||| ||||| |||||||| || |||||||||||||||||||||| Sbjct: 2487209 cagatccattgaccgcactgatgtatgcggtgcaagtgatgaattttctcaaga 2487262
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 299 bits (151), Expect = 6e-78 Identities = 208/227 (91%) Strand = Plus / Plus Query: 363 tggtttagagaactgccaagcggggtgctggaccctattccacctgaacaggtgatgcaa 422 |||||||| |||||||| || ||||||||||| |||| ||||||||||||||||||||| Sbjct: 2495974 tggtttagggaactgccgagtggggtgctggattctatcccacctgaacaggtgatgcaa 2496033 Query: 423 tgccaatctgaagaggattgtgctcgggtcgccaaatgccttccagtagctgaagcggcc 482 |||||||||||||||||||||||||| |||||||||||||||||| ||||||||| || Sbjct: 2496034 tgccaatctgaagaggattgtgctcgagtcgccaaatgccttccaccagctgaagcagct 2496093 Query: 483 ttacttgactgggccgttaatctgatggctgatgtcgtacaagaagaaaagataaacaag 542 |||||||| ||||| |||||| | ||||||||||| || ||||||||| ||||||||||| Sbjct: 2496094 ttacttgagtgggcagttaatttaatggctgatgttgtccaagaagaacagataaacaag 2496153 Query: 543 atgaatgctcgcaacattgctatggtttttgcaccaaatatgactca 589 ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 2496154 atgaatgctcgtaacattgctatggtttttgcaccaaatatgactca 2496200 Score = 170 bits (86), Expect = 4e-39 Identities = 117/126 (92%), Gaps = 1/126 (0%) Strand = Plus / Plus Query: 115 cagtgcaagtgtctttggagtttcaacaggaatcaatgcagtgttcctacgattccagag 174 |||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||| Sbjct: 2495133 cagtgcaagtgtctttggcgtttcaacag-aatcaatgcaatgttcctacgattccagag 2495191 Query: 175 gaaacagtgttccgacaattctcttgatgatgcagagacgtctttatgaacaatgtggtc 234 |||||||||| || || ||||||||||||||||| |||||||||||||||||| | |||| Sbjct: 2495192 gaaacagtgtaccaacgattctcttgatgatgcaaagacgtctttatgaacaaggcggtc 2495251 Query: 235 ttcggg 240 |||||| Sbjct: 2495252 ttcggg 2495257 Score = 147 bits (74), Expect = 5e-32 Identities = 110/122 (90%) Strand = Plus / Plus Query: 239 ggcagaaggtatttttcgtataaatgcagagaatagccaggaggagcttgtgagagaccg 298 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct: 2495380 ggcagaaggtatttttcgtataaatgcagagaatagccaggaggagtttgtgagagatca 2495439 Query: 299 gttaaacagcggaatcgtgccatatggtattgatgtccactgtttgtcaggtctaataaa 358 |||||| || ||||| ||||| |||| |||||| | |||||||||||||||||||| || Sbjct: 2495440 gttaaatagtggaattgtgccggatggcattgatattcactgtttgtcaggtctaatcaa 2495499 Query: 359 ag 360 || Sbjct: 2495500 ag 2495501 Score = 81.8 bits (41), Expect = 3e-12 Identities = 94/111 (84%), Gaps = 1/111 (0%) Strand = Plus / Plus Query: 1 gggtggccgaccgnngtgcagcacgtggcgcatgtcacctttgctaggttccatggnatt 60 ||||||||||| | |||||||||||||| || |||||||| | ||||||||||| ||| Sbjct: 2493090 gggtggccgacggatgtgcagcacgtggcacacgtcaccttcgacaggttccatgg-att 2493148 Query: 61 ccttgggctgcccgtcgagttcgagcccgaggtgcctcgccgcgctcccag 111 ||| || || ||||| ||| ||||||||||||| || ||||| |||||||| Sbjct: 2493149 cctcggcctccccgtggagctcgagcccgaggttccccgccgggctcccag 2493199 Score = 67.9 bits (34), Expect = 4e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 595 cagatcctttgactgcactcatgtatgcagtccaagtgatgaattttctcaaga 648 ||||||| ||||| ||||| |||||||| || |||||||||||||||||||||| Sbjct: 2496283 cagatccattgaccgcactgatgtatgcggtgcaagtgatgaattttctcaaga 2496336
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 244 bits (123), Expect = 3e-61 Identities = 201/227 (88%) Strand = Plus / Minus Query: 363 tggtttagagaactgccaagcggggtgctggaccctattccacctgaacaggtgatgcaa 422 |||||||| ||||| || || |||||||||||| | || ||||||||||||||||||||| Sbjct: 2708702 tggtttagggaactcccgagtggggtgctggactcaatcccacctgaacaggtgatgcaa 2708643 Query: 423 tgccaatctgaagaggattgtgctcgggtcgccaaatgccttccagtagctgaagcggcc 482 ||||| ||||||||||| |||||||| || ||||||||||||||| | ||||||| ||| Sbjct: 2708642 tgccagtctgaagaggactgtgctcgtgttgccaaatgccttccaccaactgaagcagcc 2708583 Query: 483 ttacttgactgggccgttaatctgatggctgatgtcgtacaagaagaaaagataaacaag 542 ||||| |||||||| |||||| ||||||||||||| || |||||||| | ||||||||| Sbjct: 2708582 ttactagactgggctgttaatttgatggctgatgttgtccaagaagagcaaataaacaag 2708523 Query: 543 atgaatgctcgcaacattgctatggtttttgcaccaaatatgactca 589 |||||||| ||||| ||||| |||||||||||||||||||||||||| Sbjct: 2708522 atgaatgcgcgcaatattgccatggtttttgcaccaaatatgactca 2708476 Score = 170 bits (86), Expect = 4e-39 Identities = 117/126 (92%), Gaps = 1/126 (0%) Strand = Plus / Minus Query: 115 cagtgcaagtgtctttggagtttcaacaggaatcaatgcagtgttcctacgattccagag 174 ||||||||||||||||||||||||||||| |||| |||||||| ||||| |||||||||| Sbjct: 2709404 cagtgcaagtgtctttggagtttcaacag-aatcgatgcagtgctcctatgattccagag 2709346 Query: 175 gaaacagtgttccgacaattctcttgatgatgcagagacgtctttatgaacaatgtggtc 234 |||||||||| || |||||||||||||||||||| |||||||||||||||||| | |||| Sbjct: 2709345 gaaacagtgtcccaacaattctcttgatgatgcaaagacgtctttatgaacaaggcggtc 2709286 Query: 235 ttcggg 240 |||||| Sbjct: 2709285 ttcggg 2709280 Score = 139 bits (70), Expect = 1e-29 Identities = 109/122 (89%) Strand = Plus / Minus Query: 239 ggcagaaggtatttttcgtataaatgcagagaatagccaggaggagcttgtgagagaccg 298 |||||||||||||||||| |||||||||||||||||||| || |||||||||||||||| Sbjct: 2709191 ggcagaaggtatttttcgcataaatgcagagaatagccaagaagagcttgtgagagacca 2709132 Query: 299 gttaaacagcggaatcgtgccatatggtattgatgtccactgtttgtcaggtctaataaa 358 ||||| | || ||||||||| | ||||||||||||||||||||| |||||||||| || Sbjct: 2709131 attaaatggtgggatcgtgccagagggtattgatgtccactgtttggcaggtctaatcaa 2709072 Query: 359 ag 360 || Sbjct: 2709071 ag 2709070 Score = 129 bits (65), Expect = 1e-26 Identities = 100/111 (90%), Gaps = 1/111 (0%) Strand = Plus / Minus Query: 1 gggtggccgaccgnngtgcagcacgtggcgcatgtcacctttgctaggttccatggnatt 60 ||||||||||| | ||||||||||||||||| |||||||| | |||||||||||| ||| Sbjct: 2711703 gggtggccgacggacgtgcagcacgtggcgcacgtcaccttcgataggttccatgg-att 2711645 Query: 61 ccttgggctgcccgtcgagttcgagcccgaggtgcctcgccgcgctcccag 111 ||| ||||| ||||| |||||||||||||||||||| |||||||||||||| Sbjct: 2711644 cctcgggctccccgtggagttcgagcccgaggtgccccgccgcgctcccag 2711594 Score = 75.8 bits (38), Expect = 2e-10 Identities = 53/58 (91%) Strand = Plus / Minus Query: 591 atggcagatcctttgactgcactcatgtatgcagtccaagtgatgaattttctcaaga 648 ||||||||||| ||||||||| | ||||||||||| ||||||||||||||||| |||| Sbjct: 2708395 atggcagatcccttgactgcattgatgtatgcagtacaagtgatgaattttcttaaga 2708338 Score = 44.1 bits (22), Expect = 0.57 Identities = 46/54 (85%) Strand = Plus / Plus Query: 595 cagatcctttgactgcactcatgtatgcagtccaagtgatgaattttctcaaga 648 ||||||||||||| || || ||| |||| |||||||| ||||| || ||||||| Sbjct: 21245369 cagatcctttgacagccctaatgcatgctgtccaagtcatgaacttcctcaaga 21245422 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 537 aacaagatgaatgctcgcaacattgctatggtttttgcaccaaatatgactca 589 ||||||||||||||| | ||||| || ||||| ||||| || || |||||||| Sbjct: 21245192 aacaagatgaatgctaggaacatagccatggtgtttgcccccaacatgactca 21245244 Score = 42.1 bits (21), Expect = 2.2 Identities = 91/114 (79%), Gaps = 1/114 (0%) Strand = Plus / Plus Query: 1 gggtggccgaccgnngtgcagcacgtggcgcatgtcacctttgctaggttccatggnatt 60 ||||||||||| | |||| ||||||||||| |||||||| | | |||||||| || Sbjct: 21243086 gggtggccgacggacgtgcgccacgtggcgcacgtcaccttcgaccgcttccatggc-tt 21243144 Query: 61 ccttgggctgcccgtcgagttcgagcccgaggtgcctcgccgcgctcccagcgc 114 ||| || || ||||||||||||||| |||| |||| |||||| |||||||| Sbjct: 21243145 cctcggcctccccgtcgagttcgaggtcgagatgccatgccgcgtccccagcgc 21243198
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 244 bits (123), Expect = 3e-61 Identities = 201/227 (88%) Strand = Plus / Minus Query: 363 tggtttagagaactgccaagcggggtgctggaccctattccacctgaacaggtgatgcaa 422 |||||||| ||||| || || |||||||||||| | || ||||||||||||||||||||| Sbjct: 2708646 tggtttagggaactcccgagtggggtgctggactcaatcccacctgaacaggtgatgcaa 2708587 Query: 423 tgccaatctgaagaggattgtgctcgggtcgccaaatgccttccagtagctgaagcggcc 482 ||||| ||||||||||| |||||||| || ||||||||||||||| | ||||||| ||| Sbjct: 2708586 tgccagtctgaagaggactgtgctcgtgttgccaaatgccttccaccaactgaagcagcc 2708527 Query: 483 ttacttgactgggccgttaatctgatggctgatgtcgtacaagaagaaaagataaacaag 542 ||||| |||||||| |||||| ||||||||||||| || |||||||| | ||||||||| Sbjct: 2708526 ttactagactgggctgttaatttgatggctgatgttgtccaagaagagcaaataaacaag 2708467 Query: 543 atgaatgctcgcaacattgctatggtttttgcaccaaatatgactca 589 |||||||| ||||| ||||| |||||||||||||||||||||||||| Sbjct: 2708466 atgaatgcgcgcaatattgccatggtttttgcaccaaatatgactca 2708420 Score = 170 bits (86), Expect = 4e-39 Identities = 117/126 (92%), Gaps = 1/126 (0%) Strand = Plus / Minus Query: 115 cagtgcaagtgtctttggagtttcaacaggaatcaatgcagtgttcctacgattccagag 174 ||||||||||||||||||||||||||||| |||| |||||||| ||||| |||||||||| Sbjct: 2709348 cagtgcaagtgtctttggagtttcaacag-aatcgatgcagtgctcctatgattccagag 2709290 Query: 175 gaaacagtgttccgacaattctcttgatgatgcagagacgtctttatgaacaatgtggtc 234 |||||||||| || |||||||||||||||||||| |||||||||||||||||| | |||| Sbjct: 2709289 gaaacagtgtcccaacaattctcttgatgatgcaaagacgtctttatgaacaaggcggtc 2709230 Query: 235 ttcggg 240 |||||| Sbjct: 2709229 ttcggg 2709224 Score = 139 bits (70), Expect = 1e-29 Identities = 109/122 (89%) Strand = Plus / Minus Query: 239 ggcagaaggtatttttcgtataaatgcagagaatagccaggaggagcttgtgagagaccg 298 |||||||||||||||||| |||||||||||||||||||| || |||||||||||||||| Sbjct: 2709135 ggcagaaggtatttttcgcataaatgcagagaatagccaagaagagcttgtgagagacca 2709076 Query: 299 gttaaacagcggaatcgtgccatatggtattgatgtccactgtttgtcaggtctaataaa 358 ||||| | || ||||||||| | ||||||||||||||||||||| |||||||||| || Sbjct: 2709075 attaaatggtgggatcgtgccagagggtattgatgtccactgtttggcaggtctaatcaa 2709016 Query: 359 ag 360 || Sbjct: 2709015 ag 2709014 Score = 129 bits (65), Expect = 1e-26 Identities = 100/111 (90%), Gaps = 1/111 (0%) Strand = Plus / Minus Query: 1 gggtggccgaccgnngtgcagcacgtggcgcatgtcacctttgctaggttccatggnatt 60 ||||||||||| | ||||||||||||||||| |||||||| | |||||||||||| ||| Sbjct: 2711647 gggtggccgacggacgtgcagcacgtggcgcacgtcaccttcgataggttccatgg-att 2711589 Query: 61 ccttgggctgcccgtcgagttcgagcccgaggtgcctcgccgcgctcccag 111 ||| ||||| ||||| |||||||||||||||||||| |||||||||||||| Sbjct: 2711588 cctcgggctccccgtggagttcgagcccgaggtgccccgccgcgctcccag 2711538 Score = 75.8 bits (38), Expect = 2e-10 Identities = 53/58 (91%) Strand = Plus / Minus Query: 591 atggcagatcctttgactgcactcatgtatgcagtccaagtgatgaattttctcaaga 648 ||||||||||| ||||||||| | ||||||||||| ||||||||||||||||| |||| Sbjct: 2708339 atggcagatcccttgactgcattgatgtatgcagtacaagtgatgaattttcttaaga 2708282 Score = 44.1 bits (22), Expect = 0.57 Identities = 46/54 (85%) Strand = Plus / Plus Query: 595 cagatcctttgactgcactcatgtatgcagtccaagtgatgaattttctcaaga 648 ||||||||||||| || || ||| |||| |||||||| ||||| || ||||||| Sbjct: 21171578 cagatcctttgacagccctaatgcatgctgtccaagtcatgaacttcctcaaga 21171631 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 537 aacaagatgaatgctcgcaacattgctatggtttttgcaccaaatatgactca 589 ||||||||||||||| | ||||| || ||||| ||||| || || |||||||| Sbjct: 21171401 aacaagatgaatgctaggaacatagccatggtgtttgcccccaacatgactca 21171453 Score = 42.1 bits (21), Expect = 2.2 Identities = 91/114 (79%), Gaps = 1/114 (0%) Strand = Plus / Plus Query: 1 gggtggccgaccgnngtgcagcacgtggcgcatgtcacctttgctaggttccatggnatt 60 ||||||||||| | |||| ||||||||||| |||||||| | | |||||||| || Sbjct: 21169295 gggtggccgacggacgtgcgccacgtggcgcacgtcaccttcgaccgcttccatggc-tt 21169353 Query: 61 ccttgggctgcccgtcgagttcgagcccgaggtgcctcgccgcgctcccagcgc 114 ||| || || ||||||||||||||| |||| |||| |||||| |||||||| Sbjct: 21169354 cctcggcctccccgtcgagttcgaggtcgagatgccatgccgcgtccccagcgc 21169407
>emb|AL954632.3|CNS08CD0 Oryza sativa chromosome 12, . BAC OSJNBa0031E02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 151878 Score = 244 bits (123), Expect = 3e-61 Identities = 201/227 (88%) Strand = Plus / Minus Query: 363 tggtttagagaactgccaagcggggtgctggaccctattccacctgaacaggtgatgcaa 422 |||||||| ||||| || || |||||||||||| | || ||||||||||||||||||||| Sbjct: 77628 tggtttagggaactcccgagtggggtgctggactcaatcccacctgaacaggtgatgcaa 77569 Query: 423 tgccaatctgaagaggattgtgctcgggtcgccaaatgccttccagtagctgaagcggcc 482 ||||| ||||||||||| |||||||| || ||||||||||||||| | ||||||| ||| Sbjct: 77568 tgccagtctgaagaggactgtgctcgtgttgccaaatgccttccaccaactgaagcagcc 77509 Query: 483 ttacttgactgggccgttaatctgatggctgatgtcgtacaagaagaaaagataaacaag 542 ||||| |||||||| |||||| ||||||||||||| || |||||||| | ||||||||| Sbjct: 77508 ttactagactgggctgttaatttgatggctgatgttgtccaagaagagcaaataaacaag 77449 Query: 543 atgaatgctcgcaacattgctatggtttttgcaccaaatatgactca 589 |||||||| ||||| ||||| |||||||||||||||||||||||||| Sbjct: 77448 atgaatgcgcgcaatattgccatggtttttgcaccaaatatgactca 77402 Score = 170 bits (86), Expect = 4e-39 Identities = 117/126 (92%), Gaps = 1/126 (0%) Strand = Plus / Minus Query: 115 cagtgcaagtgtctttggagtttcaacaggaatcaatgcagtgttcctacgattccagag 174 ||||||||||||||||||||||||||||| |||| |||||||| ||||| |||||||||| Sbjct: 78330 cagtgcaagtgtctttggagtttcaacag-aatcgatgcagtgctcctatgattccagag 78272 Query: 175 gaaacagtgttccgacaattctcttgatgatgcagagacgtctttatgaacaatgtggtc 234 |||||||||| || |||||||||||||||||||| |||||||||||||||||| | |||| Sbjct: 78271 gaaacagtgtcccaacaattctcttgatgatgcaaagacgtctttatgaacaaggcggtc 78212 Query: 235 ttcggg 240 |||||| Sbjct: 78211 ttcggg 78206 Score = 139 bits (70), Expect = 1e-29 Identities = 109/122 (89%) Strand = Plus / Minus Query: 239 ggcagaaggtatttttcgtataaatgcagagaatagccaggaggagcttgtgagagaccg 298 |||||||||||||||||| |||||||||||||||||||| || |||||||||||||||| Sbjct: 78117 ggcagaaggtatttttcgcataaatgcagagaatagccaagaagagcttgtgagagacca 78058 Query: 299 gttaaacagcggaatcgtgccatatggtattgatgtccactgtttgtcaggtctaataaa 358 ||||| | || ||||||||| | ||||||||||||||||||||| |||||||||| || Sbjct: 78057 attaaatggtgggatcgtgccagagggtattgatgtccactgtttggcaggtctaatcaa 77998 Query: 359 ag 360 || Sbjct: 77997 ag 77996 Score = 129 bits (65), Expect = 1e-26 Identities = 100/111 (90%), Gaps = 1/111 (0%) Strand = Plus / Minus Query: 1 gggtggccgaccgnngtgcagcacgtggcgcatgtcacctttgctaggttccatggnatt 60 ||||||||||| | ||||||||||||||||| |||||||| | |||||||||||| ||| Sbjct: 80629 gggtggccgacggacgtgcagcacgtggcgcacgtcaccttcgataggttccatgg-att 80571 Query: 61 ccttgggctgcccgtcgagttcgagcccgaggtgcctcgccgcgctcccag 111 ||| ||||| ||||| |||||||||||||||||||| |||||||||||||| Sbjct: 80570 cctcgggctccccgtggagttcgagcccgaggtgccccgccgcgctcccag 80520 Score = 75.8 bits (38), Expect = 2e-10 Identities = 53/58 (91%) Strand = Plus / Minus Query: 591 atggcagatcctttgactgcactcatgtatgcagtccaagtgatgaattttctcaaga 648 ||||||||||| ||||||||| | ||||||||||| ||||||||||||||||| |||| Sbjct: 77321 atggcagatcccttgactgcattgatgtatgcagtacaagtgatgaattttcttaaga 77264
>gb|AY364311.1| Oryza sativa (japonica cultivar-group) Rho GTPase activating protein 2 mRNA, complete cds Length = 1552 Score = 131 bits (66), Expect = 3e-27 Identities = 98/109 (89%) Strand = Plus / Plus Query: 540 aagatgaatgctcgcaacattgctatggtttttgcaccaaatatgactcanatggcagat 599 |||||||| |||||||||||||||||||||||||||||||| |||||||| ||||| ||| Sbjct: 748 aagatgaacgctcgcaacattgctatggtttttgcaccaaacatgactcagatggccgat 807 Query: 600 cctttgactgcactcatgtatgcagtccaagtgatgaattttctcaaga 648 || |||||||| | || ||||||| |||||||||||||||||||||| Sbjct: 808 cccttgactgctttgatacatgcagttcaagtgatgaattttctcaaga 856 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 81 tcgagcccgaggtgcctcgccgcgctcccagcgccagtgcaagtgtctttggagtttca 139 |||||||||| ||||| |||| ||| || |||||||||| ||||| |||||||||||| Sbjct: 290 tcgagcccgacgtgccccgccccgcgcctagcgccagtgtgagtgtatttggagtttca 348
>dbj|AK067772.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013120L23, full insert sequence Length = 1695 Score = 131 bits (66), Expect = 3e-27 Identities = 98/109 (89%) Strand = Plus / Plus Query: 540 aagatgaatgctcgcaacattgctatggtttttgcaccaaatatgactcanatggcagat 599 |||||||| |||||||||||||||||||||||||||||||| |||||||| ||||| ||| Sbjct: 863 aagatgaacgctcgcaacattgctatggtttttgcaccaaacatgactcagatggccgat 922 Query: 600 cctttgactgcactcatgtatgcagtccaagtgatgaattttctcaaga 648 || |||||||| | || ||||||| |||||||||||||||||||||| Sbjct: 923 cccttgactgctttgatacatgcagttcaagtgatgaattttctcaaga 971 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 81 tcgagcccgaggtgcctcgccgcgctcccagcgccagtgcaagtgtctttggagtttca 139 |||||||||| ||||| |||| ||| || |||||||||| ||||| |||||||||||| Sbjct: 406 tcgagcccgacgtgccccgccccgcgcctagcgccagtgtgagtgtatttggagtttca 464
>gb|AF064787.1|AF064787 Lotus japonicus rac GTPase activating protein 1 mRNA, complete cds Length = 2102 Score = 129 bits (65), Expect = 1e-26 Identities = 100/112 (89%) Strand = Plus / Plus Query: 537 aacaagatgaatgctcgcaacattgctatggtttttgcaccaaatatgactcanatggca 596 |||||||||||||| || || ||||| ||||||||||||||||| |||||||| ||||| Sbjct: 1054 aacaagatgaatgcgcgtaatattgcaatggtttttgcaccaaacatgactcatatggcc 1113 Query: 597 gatcctttgactgcactcatgtatgcagtccaagtgatgaattttctcaaga 648 |||||||||||||| | ||||||||||| ||||| |||||||||||||||| Sbjct: 1114 gatcctttgactgctttgatgtatgcagtacaagtcatgaattttctcaaga 1165 Score = 58.0 bits (29), Expect = 4e-05 Identities = 98/121 (80%) Strand = Plus / Plus Query: 261 aatgcagagaatagccaggaggagcttgtgagagaccggttaaacagcggaatcgtgcca 320 ||||| || ||||| || |||||||||||||| || | |||||||| ||| | || || Sbjct: 778 aatgctgaaaatagtcaagaggagcttgtgagggaacaattaaacagaggagttgtaccg 837 Query: 321 tatggtattgatgtccactgtttgtcaggtctaataaaagcatggtttagagaactgcca 380 |||| ||||||| ||||| ||| ||||||| ||||| || |||||||||||||| ||| Sbjct: 838 aatggcgttgatgtgcactgcttggcaggtcttataaaggcttggtttagagaactccca 897 Query: 381 a 381 | Sbjct: 898 a 898
>ref|NM_180127.1| Arabidopsis thaliana Rac GTPase activator AT2G46710 mRNA, complete cds Length = 1731 Score = 121 bits (61), Expect = 3e-24 Identities = 99/112 (88%) Strand = Plus / Plus Query: 537 aacaagatgaatgctcgcaacattgctatggtttttgcaccaaatatgactcanatggca 596 ||||| |||||||||||||| | |||||||| ||||| |||||||||||||| |||||| Sbjct: 1020 aacaaaatgaatgctcgcaatgtagctatggtctttgctccaaatatgactcaaatggca 1079 Query: 597 gatcctttgactgcactcatgtatgcagtccaagtgatgaattttctcaaga 648 |||||||| ||||||||||| | ||||| ||||||||||| |||||||||| Sbjct: 1080 gatcctttaactgcactcatccacgcagtgcaagtgatgaactttctcaaga 1131
>gb|BT005369.1| Arabidopsis thaliana At2g46710 mRNA, complete cds Length = 1368 Score = 121 bits (61), Expect = 3e-24 Identities = 99/112 (88%) Strand = Plus / Plus Query: 537 aacaagatgaatgctcgcaacattgctatggtttttgcaccaaatatgactcanatggca 596 ||||| |||||||||||||| | |||||||| ||||| |||||||||||||| |||||| Sbjct: 850 aacaaaatgaatgctcgcaatgtagctatggtctttgctccaaatatgactcaaatggca 909 Query: 597 gatcctttgactgcactcatgtatgcagtccaagtgatgaattttctcaaga 648 |||||||| ||||||||||| | ||||| ||||||||||| |||||||||| Sbjct: 910 gatcctttaactgcactcatccacgcagtgcaagtgatgaactttctcaaga 961
>dbj|AK117311.1| Arabidopsis thaliana At2g46710 mRNA for putative rac GTPase activating protein, complete cds, clone: RAFL16-87-M24 Length = 1541 Score = 121 bits (61), Expect = 3e-24 Identities = 99/112 (88%) Strand = Plus / Plus Query: 537 aacaagatgaatgctcgcaacattgctatggtttttgcaccaaatatgactcanatggca 596 ||||| |||||||||||||| | |||||||| ||||| |||||||||||||| |||||| Sbjct: 918 aacaaaatgaatgctcgcaatgtagctatggtctttgctccaaatatgactcaaatggca 977 Query: 597 gatcctttgactgcactcatgtatgcagtccaagtgatgaattttctcaaga 648 |||||||| ||||||||||| | ||||| ||||||||||| |||||||||| Sbjct: 978 gatcctttaactgcactcatccacgcagtgcaagtgatgaactttctcaaga 1029
>ref|NM_122145.3| Arabidopsis thaliana Rac GTPase activator AT5G22400 mRNA, complete cds Length = 1865 Score = 109 bits (55), Expect = 1e-20 Identities = 99/114 (86%) Strand = Plus / Plus Query: 535 taaacaagatgaatgctcgcaacattgctatggtttttgcaccaaatatgactcanatgg 594 |||||||||||||| | |||||||| ||||||||||| |||||||||||||| || |||| Sbjct: 1014 taaacaagatgaattcacgcaacatcgctatggttttcgcaccaaatatgacacagatgg 1073 Query: 595 cagatcctttgactgcactcatgtatgcagtccaagtgatgaattttctcaaga 648 ||||| |||| ||||| |||||||| || ||||||||||| |||||||||| Sbjct: 1074 atgatccactgacagcactgatgtatgcggttcaagtgatgaactttctcaaga 1127 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 330 gatgtccactgtttgtcaggtctaataaaagcatggtttagagaactgcc 379 ||||| ||||||||| |||| || || || |||||||||||||||||||| Sbjct: 809 gatgttcactgtttggcagggcttatcaaggcatggtttagagaactgcc 858 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 405 cctgaacaggtgatgcaatgccaatctgaagagga 439 ||||||||||||||||| |||||| | |||||||| Sbjct: 884 cctgaacaggtgatgcagtgccaaacagaagagga 918
>emb|BX832015.1|CNS0A147 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH46ZE11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1674 Score = 109 bits (55), Expect = 1e-20 Identities = 99/114 (86%) Strand = Plus / Plus Query: 535 taaacaagatgaatgctcgcaacattgctatggtttttgcaccaaatatgactcanatgg 594 |||||||||||||| | |||||||| ||||||||||| |||||||||||||| || |||| Sbjct: 1009 taaacaagatgaattcacgcaacatcgctatggttttcgcaccaaatatgacacagatgg 1068 Query: 595 cagatcctttgactgcactcatgtatgcagtccaagtgatgaattttctcaaga 648 ||||| |||| ||||| |||||||| || ||||||||||| |||||||||| Sbjct: 1069 atgatccactgacagcactgatgtatgcggttcaagtgatgaactttctcaaga 1122 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 330 gatgtccactgtttgtcaggtctaataaaagcatggtttagagaactgcc 379 ||||| ||||||||| |||| || || || |||||||||||||||||||| Sbjct: 804 gatgttcactgtttggcagggcttatcaaggcatggtttagagaactgcc 853 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 405 cctgaacaggtgatgcaatgccaatctgaagagga 439 ||||||||||||||||| |||||| | |||||||| Sbjct: 879 cctgaacaggtgatgcagtgccaaacagaagagga 913
>emb|BX832004.1|CNS09YVN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH45ZE06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1840 Score = 109 bits (55), Expect = 1e-20 Identities = 99/114 (86%) Strand = Plus / Plus Query: 535 taaacaagatgaatgctcgcaacattgctatggtttttgcaccaaatatgactcanatgg 594 |||||||||||||| | |||||||| ||||||||||| |||||||||||||| || |||| Sbjct: 1015 taaacaagatgaattcacgcaacatcgctatggttttcgcaccaaatatgacacagatgg 1074 Query: 595 cagatcctttgactgcactcatgtatgcagtccaagtgatgaattttctcaaga 648 ||||| |||| ||||| |||||||| || ||||||||||| |||||||||| Sbjct: 1075 atgatccactgacagcactgatgtatgcggttcaagtgatgaactttctcaaga 1128 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 330 gatgtccactgtttgtcaggtctaataaaagcatggtttagagaactgcc 379 ||||| ||||||||| |||| || || || |||||||||||||||||||| Sbjct: 810 gatgttcactgtttggcagggcttatcaaggcatggtttagagaactgcc 859 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 405 cctgaacaggtgatgcaatgccaatctgaagagga 439 ||||||||||||||||| |||||| | |||||||| Sbjct: 885 cctgaacaggtgatgcagtgccaaacagaagagga 919
>ref|XM_473604.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1440 Score = 89.7 bits (45), Expect = 1e-14 Identities = 95/112 (84%) Strand = Plus / Plus Query: 537 aacaagatgaatgctcgcaacattgctatggtttttgcaccaaatatgactcanatggca 596 ||||||||||||||| | ||||| |||||||| ||||| ||||| |||||||| ||||| Sbjct: 820 aacaagatgaatgctagaaacatcgctatggtctttgcgccaaacatgactcagatggcc 879 Query: 597 gatcctttgactgcactcatgtatgcagtccaagtgatgaattttctcaaga 648 ||||| |||||||| || || ||||||| || || |||||||| ||||||| Sbjct: 880 gatccattgactgccctgatacatgcagttcaggtcatgaatttcctcaaga 931
>dbj|AK101984.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033078K23, full insert sequence Length = 1698 Score = 89.7 bits (45), Expect = 1e-14 Identities = 95/112 (84%) Strand = Plus / Plus Query: 537 aacaagatgaatgctcgcaacattgctatggtttttgcaccaaatatgactcanatggca 596 ||||||||||||||| | ||||| |||||||| ||||| ||||| |||||||| ||||| Sbjct: 878 aacaagatgaatgctagaaacatcgctatggtctttgcgccaaacatgactcagatggcc 937 Query: 597 gatcctttgactgcactcatgtatgcagtccaagtgatgaattttctcaaga 648 ||||| |||||||| || || ||||||| || || |||||||| ||||||| Sbjct: 938 gatccattgactgccctgatacatgcagttcaggtcatgaatttcctcaaga 989
>ref|NM_111982.1| Arabidopsis thaliana Rac GTPase activator AT3G11490 mRNA, complete cds Length = 1308 Score = 87.7 bits (44), Expect = 4e-14 Identities = 91/107 (85%) Strand = Plus / Plus Query: 537 aacaagatgaatgctcgcaacattgctatggtttttgcaccaaatatgactcanatggca 596 ||||||||||||||||| |||||||| |||||||||||||| || |||||||| ||| Sbjct: 814 aacaagatgaatgctcgaaacattgcaatggtttttgcacctaacatgactcagatgttg 873 Query: 597 gatcctttgactgcactcatgtatgcagtccaagtgatgaattttct 643 ||||| ||||| || || |||||||| || ||||| ||||| ||||| Sbjct: 874 gatccattgacggctctaatgtatgctgtgcaagttatgaactttct 920
>ref|XM_477664.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1740 Score = 83.8 bits (42), Expect = 7e-13 Identities = 95/113 (84%) Strand = Plus / Plus Query: 536 aaacaagatgaatgctcgcaacattgctatggtttttgcaccaaatatgactcanatggc 595 ||||||||||||||| || || | |||||||| |||||||| |||||||| || ||| | Sbjct: 837 aaacaagatgaatgcccgaaatgtcgctatggtctttgcacccaatatgacgcagatgtc 896 Query: 596 agatcctttgactgcactcatgtatgcagtccaagtgatgaattttctcaaga 648 ||||||| | ||||| || ||| |||| || |||||||||||| ||||||||| Sbjct: 897 agatcctcttactgctctgatgcatgctgttcaagtgatgaatcttctcaaga 949
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 83.8 bits (42), Expect = 7e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 540 aagatgaatgctcgcaacattgctatggtttttgcaccaaatatgactca 589 |||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 27764813 aagatgaacgctcgcaacattgctatggtttttgcaccaaacatgactca 27764862 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 619 atgcagtccaagtgatgaattttctcaaga 648 ||||||| |||||||||||||||||||||| Sbjct: 27764992 atgcagttcaagtgatgaattttctcaaga 27765021
>dbj|AP005823.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0663F07 Length = 159046 Score = 83.8 bits (42), Expect = 7e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 540 aagatgaatgctcgcaacattgctatggtttttgcaccaaatatgactca 589 |||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 50146 aagatgaacgctcgcaacattgctatggtttttgcaccaaacatgactca 50195 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 619 atgcagtccaagtgatgaattttctcaaga 648 ||||||| |||||||||||||||||||||| Sbjct: 50325 atgcagttcaagtgatgaattttctcaaga 50354
>dbj|AK103596.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133E02, full insert sequence Length = 1740 Score = 83.8 bits (42), Expect = 7e-13 Identities = 95/113 (84%) Strand = Plus / Plus Query: 536 aaacaagatgaatgctcgcaacattgctatggtttttgcaccaaatatgactcanatggc 595 ||||||||||||||| || || | |||||||| |||||||| |||||||| || ||| | Sbjct: 837 aaacaagatgaatgcccgaaatgtcgctatggtctttgcacccaatatgacacagatgtc 896 Query: 596 agatcctttgactgcactcatgtatgcagtccaagtgatgaattttctcaaga 648 ||||||| | ||||| || ||| |||| || |||||||||||| ||||||||| Sbjct: 897 agatcctcttactgctctgatgcatgctgttcaagtgatgaatcttctcaaga 949
>gb|AY364310.1| Oryza sativa (japonica cultivar-group) Rho GTPase activating protein 1 mRNA, partial cds Length = 1350 Score = 81.8 bits (41), Expect = 3e-12 Identities = 94/112 (83%) Strand = Plus / Plus Query: 537 aacaagatgaatgctcgcaacattgctatggtttttgcaccaaatatgactcanatggca 596 ||||||||||||||| | ||||| || ||||| ||||| || || |||||||| ||| || Sbjct: 544 aacaagatgaatgctaggaacatagccatggtgtttgcccccaacatgactcagatgtca 603 Query: 597 gatcctttgactgcactcatgtatgcagtccaagtgatgaattttctcaaga 648 ||||||||||| || || ||| |||| |||||||| ||||| || ||||||| Sbjct: 604 gatcctttgacagccctaatgcatgctgtccaagtcatgaacttcctcaaga 655 Score = 54.0 bits (27), Expect = 6e-04 Identities = 106/132 (80%), Gaps = 1/132 (0%) Strand = Plus / Plus Query: 1 gggtggccgaccgnngtgcagcacgtggcgcatgtcacctttgctaggttccatggnatt 60 ||||||||||| | |||| ||||||||||| |||||||| | | |||||||| || Sbjct: 10 gggtggccgacggacgtgcgccacgtggcgcacgtcaccttcgaccgcttccatggc-tt 68 Query: 61 ccttgggctgcccgtcgagttcgagcccgaggtgcctcgccgcgctcccagcgccagtgc 120 ||| || || ||||||||||||||| |||| |||| |||||| |||||||| ||||| Sbjct: 69 cctcggcctccccgtcgagttcgaggtcgagatgccatgccgcgtccccagcgctagtgc 128 Query: 121 aagtgtctttgg 132 ||||| ||||| Sbjct: 129 tagtgtttttgg 140
>gb|BT013546.1| Lycopersicon esculentum clone 132267F, mRNA sequence Length = 2014 Score = 75.8 bits (38), Expect = 2e-10 Identities = 85/101 (84%) Strand = Plus / Plus Query: 537 aacaagatgaatgctcgcaacattgctatggtttttgcaccaaatatgactcanatggca 596 |||||||||||||| | || ||||| ||||| ||||| || || |||||||| |||| Sbjct: 1000 aacaagatgaatgcaagaaatattgccatggtgtttgctcctaacatgactcagatggtt 1059 Query: 597 gatcctttgactgcactcatgtatgcagtccaagtgatgaa 637 ||||||||||||||||| || ||||||||||||| ||||| Sbjct: 1060 gatcctttgactgcactaattcatgcagtccaagtaatgaa 1100 Score = 44.1 bits (22), Expect = 0.57 Identities = 28/30 (93%) Strand = Plus / Plus Query: 110 agcgccagtgcaagtgtctttggagtttca 139 ||||| ||||||||||| |||||||||||| Sbjct: 571 agcgcaagtgcaagtgtttttggagtttca 600
>gb|AC008153.5|AC008153 Arabidopsis thaliana chromosome 3 BAC F24K9 genomic sequence, complete sequence Length = 117296 Score = 73.8 bits (37), Expect = 6e-10 Identities = 49/53 (92%) Strand = Plus / Minus Query: 537 aacaagatgaatgctcgcaacattgctatggtttttgcaccaaatatgactca 589 ||||||||||||||||| |||||||| |||||||||||||| || |||||||| Sbjct: 60628 aacaagatgaatgctcgaaacattgcaatggtttttgcacctaacatgactca 60576
>dbj|AB007651.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MWD9 Length = 85421 Score = 71.9 bits (36), Expect = 3e-09 Identities = 48/52 (92%) Strand = Plus / Minus Query: 535 taaacaagatgaatgctcgcaacattgctatggtttttgcaccaaatatgac 586 |||||||||||||| | |||||||| ||||||||||| |||||||||||||| Sbjct: 62582 taaacaagatgaattcacgcaacatcgctatggttttcgcaccaaatatgac 62531 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Minus Query: 604 tgactgcactcatgtatgcagtccaagtgatgaattttctcaaga 648 |||| ||||| |||||||| || ||||||||||| |||||||||| Sbjct: 62428 tgacagcactgatgtatgcggttcaagtgatgaactttctcaaga 62384 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 405 cctgaacaggtgatgcaatgccaatctgaagagga 439 ||||||||||||||||| |||||| | |||||||| Sbjct: 62712 cctgaacaggtgatgcagtgccaaacagaagagga 62678 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 gcatggtttagagaactgcc 379 |||||||||||||||||||| Sbjct: 62757 gcatggtttagagaactgcc 62738
>ref|NM_100707.2| Arabidopsis thaliana Rac GTPase activator AT1G08340 mRNA, complete cds Length = 1236 Score = 67.9 bits (34), Expect = 4e-08 Identities = 90/109 (82%) Strand = Plus / Plus Query: 540 aagatgaatgctcgcaacattgctatggtttttgcaccaaatatgactcanatggcagat 599 |||||||| |||| ||| ||||| | || ||||| || || ||| |||| |||||||| Sbjct: 787 aagatgaactctcgtaaccttgctttagtctttgcccccaacatgtctcagatggcagac 846 Query: 600 cctttgactgcactcatgtatgcagtccaagtgatgaattttctcaaga 648 ||||| |||||| | |||||||| |||||||||||||| || ||||||| Sbjct: 847 cctttaactgcattgatgtatgcggtccaagtgatgaagttgctcaaga 895
>gb|BT014961.1| Arabidopsis thaliana At1g08340 gene, complete cds Length = 996 Score = 67.9 bits (34), Expect = 4e-08 Identities = 90/109 (82%) Strand = Plus / Plus Query: 540 aagatgaatgctcgcaacattgctatggtttttgcaccaaatatgactcanatggcagat 599 |||||||| |||| ||| ||||| | || ||||| || || ||| |||| |||||||| Sbjct: 547 aagatgaactctcgtaaccttgctttagtctttgcccccaacatgtctcagatggcagac 606 Query: 600 cctttgactgcactcatgtatgcagtccaagtgatgaattttctcaaga 648 ||||| |||||| | |||||||| |||||||||||||| || ||||||| Sbjct: 607 cctttaactgcattgatgtatgcggtccaagtgatgaagttgctcaaga 655
>gb|BT012608.1| Arabidopsis thaliana At1g08340 gene, complete cds Length = 1329 Score = 67.9 bits (34), Expect = 4e-08 Identities = 90/109 (82%) Strand = Plus / Plus Query: 540 aagatgaatgctcgcaacattgctatggtttttgcaccaaatatgactcanatggcagat 599 |||||||| |||| ||| ||||| | || ||||| || || ||| |||| |||||||| Sbjct: 733 aagatgaactctcgtaaccttgctttagtctttgcccccaacatgtctcagatggcagac 792 Query: 600 cctttgactgcactcatgtatgcagtccaagtgatgaattttctcaaga 648 ||||| |||||| | |||||||| |||||||||||||| || ||||||| Sbjct: 793 cctttaactgcattgatgtatgcggtccaagtgatgaagttgctcaaga 841
>gb|AC005819.3| Arabidopsis thaliana chromosome 2 clone T3A4 map CIC06C03, complete sequence Length = 55870 Score = 67.9 bits (34), Expect = 4e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 591 atggcagatcctttgactgcactcatgtatgcagtccaagtgatgaattttctcaaga 648 |||||||||||||| ||||||||||| | ||||| ||||||||||| |||||||||| Sbjct: 48755 atggcagatcctttaactgcactcatccacgcagtgcaagtgatgaactttctcaaga 48812 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 537 aacaagatgaatgctcgcaacattgctatggtttttgcaccaaatatgactca 589 ||||| |||||||||||||| | |||||||| ||||| |||||||||||||| Sbjct: 48610 aacaaaatgaatgctcgcaatgtagctatggtctttgctccaaatatgactca 48662
>dbj|AP004475.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT01I13, TM0010, complete sequence Length = 87900 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 537 aacaagatgaatgctcgcaacattgctatggtttttgcaccaaatatgactca 589 |||||||||||||| || || ||||| ||||||||||||||||| |||||||| Sbjct: 21927 aacaagatgaatgcgcgtaatattgcaatggtttttgcaccaaacatgactca 21979 Score = 60.0 bits (30), Expect = 1e-05 Identities = 51/58 (87%) Strand = Plus / Plus Query: 591 atggcagatcctttgactgcactcatgtatgcagtccaagtgatgaattttctcaaga 648 ||||| |||||||||||||| | ||||||||||| ||||| |||| ||||||||||| Sbjct: 22657 atggccgatcctttgactgctttgatgtatgcagtacaagtcatgagttttctcaaga 22714
>ref|NM_116544.3| Arabidopsis thaliana Rac GTPase activator AT4G03100 mRNA, complete cds Length = 1691 Score = 61.9 bits (31), Expect = 2e-06 Identities = 117/146 (80%) Strand = Plus / Plus Query: 492 tgggccgttaatctgatggctgatgtcgtacaagaagaaaagataaacaagatgaatgct 551 ||||| ||| |||| ||||||||||| || |||||||| || ||||| |||||||| Sbjct: 810 tgggctgttgatcttatggctgatgttgttgaagaagaagagtctaacaaaatgaatgca 869 Query: 552 cgcaacattgctatggtttttgcaccaaatatgactcanatggcagatcctttgactgca 611 | || || || ||||||||||| || ||||||||||| ||| ||||||| || || || Sbjct: 870 aggaatatagccatggtttttgctcctaatatgactcagatgacagatccattaacggct 929 Query: 612 ctcatgtatgcagtccaagtgatgaa 637 || ||| |||| || ||||||||||| Sbjct: 930 cttatgcatgctgttcaagtgatgaa 955 Score = 40.1 bits (20), Expect = 8.8 Identities = 41/48 (85%) Strand = Plus / Plus Query: 326 tattgatgtccactgtttgtcaggtctaataaaagcatggtttagaga 373 ||||||||| || |||||| | ||||| || ||||| ||||||||||| Sbjct: 644 tattgatgtgcattgtttggctggtcttattaaagcttggtttagaga 691
>emb|BX826644.1|CNS0A38C Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB4ZF07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1480 Score = 61.9 bits (31), Expect = 2e-06 Identities = 117/146 (80%) Strand = Plus / Plus Query: 492 tgggccgttaatctgatggctgatgtcgtacaagaagaaaagataaacaagatgaatgct 551 ||||| ||| |||| ||||||||||| || |||||||| || ||||| |||||||| Sbjct: 810 tgggctgttgatcttatggctgatgttgttgaagaagaagagtctaacaaaatgaatgca 869 Query: 552 cgcaacattgctatggtttttgcaccaaatatgactcanatggcagatcctttgactgca 611 | || || || ||||||||||| || ||||||||||| ||| ||||||| || || || Sbjct: 870 aggaatatagccatggtttttgctcctaatatgactcagatgacagatccattaacggct 929 Query: 612 ctcatgtatgcagtccaagtgatgaa 637 || ||| |||| || ||||||||||| Sbjct: 930 cttatgcatgctgttcaagtgatgaa 955 Score = 40.1 bits (20), Expect = 8.8 Identities = 41/48 (85%) Strand = Plus / Plus Query: 326 tattgatgtccactgtttgtcaggtctaataaaagcatggtttagaga 373 ||||||||| || |||||| | ||||| || ||||| ||||||||||| Sbjct: 644 tattgatgtgcattgtttggctggtcttattaaagcttggtttagaga 691
>emb|BX827945.1|CNS0A30Q Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH37ZF05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 906 Score = 61.9 bits (31), Expect = 2e-06 Identities = 117/146 (80%) Strand = Plus / Plus Query: 492 tgggccgttaatctgatggctgatgtcgtacaagaagaaaagataaacaagatgaatgct 551 ||||| ||| |||| ||||||||||| || |||||||| || ||||| |||||||| Sbjct: 609 tgggctgttgatcttatggctgatgttgttgaagaagaagagtctaacaaaatgaatgca 668 Query: 552 cgcaacattgctatggtttttgcaccaaatatgactcanatggcagatcctttgactgca 611 | || || || ||||||||||| || ||||||||||| ||| ||||||| || || || Sbjct: 669 aggaatatagccatggtttttgctcctaatatgactcagatgacagatccattaacggct 728 Query: 612 ctcatgtatgcagtccaagtgatgaa 637 || ||| |||| || ||||||||||| Sbjct: 729 cttatgcatgctgttcaagtgatgaa 754
>gb|AC139854.21| Medicago truncatula clone mth2-16e16, complete sequence Length = 117864 Score = 60.0 bits (30), Expect = 1e-05 Identities = 51/58 (87%) Strand = Plus / Minus Query: 591 atggcagatcctttgactgcactcatgtatgcagtccaagtgatgaattttctcaaga 648 |||| ||||||||||||||| || |||||||| || ||||| |||||||| ||||||| Sbjct: 114823 atggtagatcctttgactgctctgatgtatgctgtacaagtcatgaatttcctcaaga 114766 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 537 aacaagatgaatgctcgcaacattgctatggtttttgcaccaaatatgactca 589 ||||||||||| || || || ||||| ||||||||||||||||| |||||||| Sbjct: 115807 aacaagatgaacgcacgtaatattgcaatggtttttgcaccaaacatgactca 115755
>gb|AC150442.2| Medicago truncatula chromosome 7 BAC clone mth2-2o12, complete sequence Length = 89504 Score = 60.0 bits (30), Expect = 1e-05 Identities = 51/58 (87%) Strand = Plus / Minus Query: 591 atggcagatcctttgactgcactcatgtatgcagtccaagtgatgaattttctcaaga 648 |||| ||||||||||||||| || |||||||| || ||||| |||||||| ||||||| Sbjct: 14584 atggtagatcctttgactgctctgatgtatgctgtacaagtcatgaatttcctcaaga 14527 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 537 aacaagatgaatgctcgcaacattgctatggtttttgcaccaaatatgactca 589 ||||||||||| || || || ||||| ||||||||||||||||| |||||||| Sbjct: 15568 aacaagatgaacgcacgtaatattgcaatggtttttgcaccaaacatgactca 15516
>gb|AC011438.3|AC011438 Genomic sequence for Arabidopsis thaliana BAC T23G18 from chromosome I, complete sequence Length = 91470 Score = 60.0 bits (30), Expect = 1e-05 Identities = 51/58 (87%) Strand = Plus / Plus Query: 591 atggcagatcctttgactgcactcatgtatgcagtccaagtgatgaattttctcaaga 648 |||||||| ||||| |||||| | |||||||| |||||||||||||| || ||||||| Sbjct: 90189 atggcagaccctttaactgcattgatgtatgcggtccaagtgatgaagttgctcaaga 90246
>gb|AC006932.8|AC006932 Genomic sequence for Arabidopsis thaliana BAC T27G7 from chromosome I, complete sequence Length = 89479 Score = 60.0 bits (30), Expect = 1e-05 Identities = 51/58 (87%) Strand = Plus / Plus Query: 591 atggcagatcctttgactgcactcatgtatgcagtccaagtgatgaattttctcaaga 648 |||||||| ||||| |||||| | |||||||| |||||||||||||| || ||||||| Sbjct: 13105 atggcagaccctttaactgcattgatgtatgcggtccaagtgatgaagttgctcaaga 13162
>gb|AF064789.1|AF064789 Lotus japonicus rac GTPase activating protein 3 mRNA, partial cds Length = 1663 Score = 60.0 bits (30), Expect = 1e-05 Identities = 128/161 (79%) Strand = Plus / Plus Query: 480 gccttacttgactgggccgttaatctgatggctgatgtcgtacaagaagaaaagataaac 539 ||||||||| ||||||| || |||| ||||||||||| || ||||||| || ||| Sbjct: 605 gccttacttaactgggctcttgatctcatggctgatgttgtggaagaagaggagcataac 664 Query: 540 aagatgaatgctcgcaacattgctatggtttttgcaccaaatatgactcanatggcagat 599 || ||| ||||| | || || || ||||||||||| |||||||||||||| ||| | ||| Sbjct: 665 aaaatggatgctaggaatatagcaatggtttttgctccaaatatgactcagatgtctgat 724 Query: 600 cctttgactgcactcatgtatgcagtccaagtgatgaattt 640 || | ||||| || ||| | || |||||||| |||||||| Sbjct: 725 ccactaactgctctgatgcacgcggtccaagtaatgaattt 765 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 327 attgatgtccactgtttgtcaggtctaataaaagcatggtttagaga 373 ||||||||||| || ||| |||| ||||| ||||||||||| ||||| Sbjct: 452 attgatgtccattgcttggcagggctaattaaagcatggttcagaga 498
>ref|NM_128304.1| Arabidopsis thaliana Rac GTPase activator AT2G27440 mRNA, complete cds Length = 1107 Score = 58.0 bits (29), Expect = 4e-05 Identities = 58/68 (85%) Strand = Plus / Plus Query: 570 tttgcaccaaatatgactcanatggcagatcctttgactgcactcatgtatgcagtccaa 629 |||||||| || ||| | || |||||||||||||| || ||| | ||||||||||| ||| Sbjct: 763 tttgcacccaacatgtcccagatggcagatcctttaacagcattaatgtatgcagtgcaa 822 Query: 630 gtgatgaa 637 |||||||| Sbjct: 823 gtgatgaa 830
>emb|AL606639.3|OSJN00072 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0020J04, complete sequence Length = 164567 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 537 aacaagatgaatgctcgcaacattgctatggtttttgcaccaaatatgactca 589 ||||||||||||||| | ||||| |||||||| ||||| ||||| |||||||| Sbjct: 148477 aacaagatgaatgctagaaacatcgctatggtctttgcgccaaacatgactca 148529
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 537 aacaagatgaatgctcgcaacattgctatggtttttgcaccaaatatgactca 589 ||||||||||||||| | ||||| |||||||| ||||| ||||| |||||||| Sbjct: 29081823 aacaagatgaatgctagaaacatcgctatggtctttgcgccaaacatgactca 29081875
>gb|AF064788.1|AF064788 Lotus japonicus rac GTPase activating protein 2 mRNA, partial cds Length = 1555 Score = 56.0 bits (28), Expect = 1e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 537 aacaagatgaatgctcgcaacattgctatggtttttgcaccaaatatgactcanatggca 596 ||||| |||||||| ||||| |||||||||||||| || || || ||||| || |||| Sbjct: 692 aacaaaatgaatgcacgcaatattgctatggttttcgcccccaacatgacacagatggtc 751 Query: 597 gatcctttgactgca 611 || |||||||||||| Sbjct: 752 gaccctttgactgca 766
>gb|AC006232.4| Arabidopsis thaliana chromosome 2 clone F10A12 map B68, complete sequence Length = 90341 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 591 atggcagatcctttgactgcactcatgtatgcagtccaagtgatgaa 637 |||||||||||||| || ||| | ||||||||||| ||||||||||| Sbjct: 42009 atggcagatcctttaacagcattaatgtatgcagtgcaagtgatgaa 42055
>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome Length = 943016 Score = 50.1 bits (25), Expect = 0.009 Identities = 32/33 (96%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 76 cgagttcgagcccgaggtgcctcgccgcgctcc 108 ||||||||||||||||||||| ||||||||||| Sbjct: 429929 cgagttcgagcccgaggtgcc-cgccgcgctcc 429960
>gb|AC144592.26| Medicago truncatula clone mth2-23m13, complete sequence Length = 139267 Score = 50.1 bits (25), Expect = 0.009 Identities = 82/101 (81%) Strand = Plus / Minus Query: 486 cttgactgggccgttaatctgatggctgatgtcgtacaagaagaaaagataaacaagatg 545 ||||||||||| | ||| ||||||||||||| || || | ||| || | || |||||| Sbjct: 927 cttgactgggcaatcaatttgatggctgatgttgttgaaaatgaacagttcaataagatg 868 Query: 546 aatgctcgcaacattgctatggtttttgcaccaaatatgac 586 ||||| |||||| | ||||||||||| ||||| || ||||| Sbjct: 867 aatgcgcgcaacgtagctatggttttcgcacccaacatgac 827 Score = 44.1 bits (22), Expect = 0.57 Identities = 43/50 (86%) Strand = Plus / Minus Query: 147 tcaatgcagtgttcctacgattccagaggaaacagtgttccgacaattct 196 |||||||||||||| || ||| ||||| ||||||||||| |||||||| Sbjct: 1501 tcaatgcagtgttcttatgatgatagagggaacagtgttccaacaattct 1452
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Minus Query: 536 aaacaagatgaatgctcgcaacattgctatggtttttgcaccaaatatgac 586 ||||||||||||||| || || | |||||||| |||||||| |||||||| Sbjct: 12652780 aaacaagatgaatgcccgaaatgtcgctatggtctttgcacccaatatgac 12652730 Score = 46.1 bits (23), Expect = 0.14 Identities = 52/62 (83%) Strand = Plus / Minus Query: 587 tcanatggcagatcctttgactgcactcatgtatgcagtccaagtgatgaattttctcaa 646 ||| ||| |||||||| | ||||| || ||| |||| || |||||||||||| ||||||| Sbjct: 12652640 tcagatgtcagatcctcttactgctctgatgcatgctgttcaagtgatgaatcttctcaa 12652581 Query: 647 ga 648 || Sbjct: 12652580 ga 12652579
>dbj|AP004305.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0492E07 Length = 143794 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Minus Query: 536 aaacaagatgaatgctcgcaacattgctatggtttttgcaccaaatatgac 586 ||||||||||||||| || || | |||||||| |||||||| |||||||| Sbjct: 27250 aaacaagatgaatgcccgaaatgtcgctatggtctttgcacccaatatgac 27200 Score = 46.1 bits (23), Expect = 0.14 Identities = 52/62 (83%) Strand = Plus / Minus Query: 587 tcanatggcagatcctttgactgcactcatgtatgcagtccaagtgatgaattttctcaa 646 ||| ||| |||||||| | ||||| || ||| |||| || |||||||||||| ||||||| Sbjct: 27110 tcagatgtcagatcctcttactgctctgatgcatgctgttcaagtgatgaatcttctcaa 27051 Query: 647 ga 648 || Sbjct: 27050 ga 27049
>dbj|AP004939.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT17M09, TM0105, complete sequence Length = 127990 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 537 aacaagatgaatgctcgcaacattgctatggtttt 571 ||||| |||||||| ||||| |||||||||||||| Sbjct: 100393 aacaaaatgaatgcacgcaatattgctatggtttt 100359
>gb|AC107293.4| Homo sapiens Xp BAC RP11-436D22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 156250 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 521 acaagaagaaaagataaacaaga 543 ||||||||||||||||||||||| Sbjct: 60994 acaagaagaaaagataaacaaga 61016
>gb|AF069442.1| Arabidopsis thaliana BAC T4I9, chromosome IV, near 17 cM, complete sequence Length = 98913 Score = 44.1 bits (22), Expect = 0.57 Identities = 79/98 (80%) Strand = Plus / Minus Query: 492 tgggccgttaatctgatggctgatgtcgtacaagaagaaaagataaacaagatgaatgct 551 ||||| ||| |||| ||||||||||| || |||||||| || ||||| |||||||| Sbjct: 8075 tgggctgttgatcttatggctgatgttgttgaagaagaagagtctaacaaaatgaatgca 8016 Query: 552 cgcaacattgctatggtttttgcaccaaatatgactca 589 | || || || ||||||||||| || ||||||||||| Sbjct: 8015 aggaatatagccatggtttttgctcctaatatgactca 7978 Score = 40.1 bits (20), Expect = 8.8 Identities = 41/48 (85%) Strand = Plus / Minus Query: 326 tattgatgtccactgtttgtcaggtctaataaaagcatggtttagaga 373 ||||||||| || |||||| | ||||| || ||||| ||||||||||| Sbjct: 8241 tattgatgtgcattgtttggctggtcttattaaagcttggtttagaga 8194
>gb|AC005275.1| Arabidopsis thaliana BAC F4C21 from chromosome IV, top arm, near 17 cM, complete sequence Length = 136335 Score = 44.1 bits (22), Expect = 0.57 Identities = 79/98 (80%) Strand = Plus / Plus Query: 492 tgggccgttaatctgatggctgatgtcgtacaagaagaaaagataaacaagatgaatgct 551 ||||| ||| |||| ||||||||||| || |||||||| || ||||| |||||||| Sbjct: 8041 tgggctgttgatcttatggctgatgttgttgaagaagaagagtctaacaaaatgaatgca 8100 Query: 552 cgcaacattgctatggtttttgcaccaaatatgactca 589 | || || || ||||||||||| || ||||||||||| Sbjct: 8101 aggaatatagccatggtttttgctcctaatatgactca 8138 Score = 40.1 bits (20), Expect = 8.8 Identities = 41/48 (85%) Strand = Plus / Plus Query: 326 tattgatgtccactgtttgtcaggtctaataaaagcatggtttagaga 373 ||||||||| || |||||| | ||||| || ||||| ||||||||||| Sbjct: 7875 tattgatgtgcattgtttggctggtcttattaaagcttggtttagaga 7922
>emb|AL161496.2|ATCHRIV8 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 8 Length = 195429 Score = 44.1 bits (22), Expect = 0.57 Identities = 79/98 (80%) Strand = Plus / Plus Query: 492 tgggccgttaatctgatggctgatgtcgtacaagaagaaaagataaacaagatgaatgct 551 ||||| ||| |||| ||||||||||| || |||||||| || ||||| |||||||| Sbjct: 26412 tgggctgttgatcttatggctgatgttgttgaagaagaagagtctaacaaaatgaatgca 26471 Query: 552 cgcaacattgctatggtttttgcaccaaatatgactca 589 | || || || ||||||||||| || ||||||||||| Sbjct: 26472 aggaatatagccatggtttttgctcctaatatgactca 26509 Score = 40.1 bits (20), Expect = 8.8 Identities = 41/48 (85%) Strand = Plus / Plus Query: 326 tattgatgtccactgtttgtcaggtctaataaaagcatggtttagaga 373 ||||||||| || |||||| | ||||| || ||||| ||||||||||| Sbjct: 26246 tattgatgtgcattgtttggctggtcttattaaagcttggtttagaga 26293
>emb|AL713932.4|CNS07YPD Oryza sativa chromosome 12, . BAC OSJNBb0094E08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 137571 Score = 44.1 bits (22), Expect = 0.57 Identities = 46/54 (85%) Strand = Plus / Minus Query: 595 cagatcctttgactgcactcatgtatgcagtccaagtgatgaattttctcaaga 648 ||||||||||||| || || ||| |||| |||||||| ||||| || ||||||| Sbjct: 44831 cagatcctttgacagccctaatgcatgctgtccaagtcatgaacttcctcaaga 44778 Score = 42.1 bits (21), Expect = 2.2 Identities = 91/114 (79%), Gaps = 1/114 (0%) Strand = Plus / Minus Query: 1 gggtggccgaccgnngtgcagcacgtggcgcatgtcacctttgctaggttccatggnatt 60 ||||||||||| | |||| ||||||||||| |||||||| | | |||||||| || Sbjct: 47114 gggtggccgacggacgtgcgccacgtggcgcacgtcaccttcgaccgcttccatggc-tt 47056 Query: 61 ccttgggctgcccgtcgagttcgagcccgaggtgcctcgccgcgctcccagcgc 114 ||| || || ||||||||||||||| |||| |||| |||||| |||||||| Sbjct: 47055 cctcggcctccccgtcgagttcgaggtcgagatgccatgccgcgtccccagcgc 47002 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Minus Query: 537 aacaagatgaatgctcgcaacattgctatggtttttgcaccaaatatgactca 589 ||||||||||||||| | ||||| || ||||| ||||| || || |||||||| Sbjct: 45008 aacaagatgaatgctaggaacatagccatggtgtttgcccccaacatgactca 44956
>ref|NM_001016458.2| Xenopus tropicalis hypothetical protein LOC549212 (LOC549212), mRNA Length = 2204 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 524 agaagaaaagataaacaagat 544 ||||||||||||||||||||| Sbjct: 717 agaagaaaagataaacaagat 737
>emb|AL592285.7| Human DNA sequence from clone RP11-153I22 on chromosome 1 Contains part of the PDE4B gene for phosphodiesterase 4B, cAMP-specific (phosphodiesterase E4 dunce homolog, Drosophila), complete sequence Length = 152113 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 528 gaaaagataaacaagatgaat 548 ||||||||||||||||||||| Sbjct: 44121 gaaaagataaacaagatgaat 44101
>emb|CR760964.2| Xenopus tropicalis finished cDNA, clone TEgg056h19 Length = 2204 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 524 agaagaaaagataaacaagat 544 ||||||||||||||||||||| Sbjct: 717 agaagaaaagataaacaagat 737
>gb|AC091685.4| Homo sapiens BAC clone RP11-165H4 from 7, complete sequence Length = 68299 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 375 ctgccaagcggggtgctgga 394 |||||||||||||||||||| Sbjct: 64881 ctgccaagcggggtgctgga 64900
>gb|AC142322.1| Pan troglodytes BAC clone RP43-66C5 from 7, complete sequence Length = 167122 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 ccagtgcaagtgtctttgga 133 |||||||||||||||||||| Sbjct: 92715 ccagtgcaagtgtctttgga 92734
>emb|AJ414166.1|NTA414166 Nicotiana tabacum ORF1, ORF2, ORF3 and ORF4, pararetrovirus-like sequence, V4 Length = 6696 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 351 ctaataaaagcatggtttagagaa 374 |||||||||||||| ||||||||| Sbjct: 2462 ctaataaaagcatgttttagagaa 2485 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 351 ctaataaaagcatggtttagagaa 374 |||||||||||||| ||||||||| Sbjct: 124 ctaataaaagcatgttttagagaa 101
>gb|AC006112.4| Homo sapiens chromosome 16 clone RP11-472H7, complete sequence Length = 191158 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 taaatgcagagaatagccag 278 |||||||||||||||||||| Sbjct: 165644 taaatgcagagaatagccag 165663
>gb|AC007223.5| Homo sapiens chromosome 16 clone RP11-468I15, complete sequence Length = 159520 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 taaatgcagagaatagccag 278 |||||||||||||||||||| Sbjct: 27561 taaatgcagagaatagccag 27580
>gb|AC009178.4|AC009178 Homo sapiens clone RP11-169C22 from 7q31, complete sequence Length = 178097 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 ccagtgcaagtgtctttgga 133 |||||||||||||||||||| Sbjct: 112796 ccagtgcaagtgtctttgga 112777
>gb|AC007790.1|AC007790 Homo sapiens clone RP11-283D18 from 7q31, complete sequence Length = 207791 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 ccagtgcaagtgtctttgga 133 |||||||||||||||||||| Sbjct: 7049 ccagtgcaagtgtctttgga 7030
>dbj|AB113399.1| Rattus norvegicus rCNR gene for cadherin-related neuronal receptor, exon cluster Length = 249555 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 570 tttgcaccaaatatgactca 589 |||||||||||||||||||| Sbjct: 32134 tttgcaccaaatatgactca 32153
>emb|BX957287.9| Zebrafish DNA sequence from clone DKEYP-59A8 in linkage group 20, complete sequence Length = 154419 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 564 atggtttttgcaccaaatat 583 |||||||||||||||||||| Sbjct: 94270 atggtttttgcaccaaatat 94289
>gb|DQ273263.1| Lycopersicon hirsutum endogenous virus LycEPRV_Lh9, partial sequence Length = 6460 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 351 ctaataaaagcatggtttagagaa 374 |||||||||||||| ||||||||| Sbjct: 2638 ctaataaaagcatgttttagagaa 2661
>gb|DQ273262.1| Lycopersicon hirsutum endogenous virus LycEPRV_Lh8, complete sequence Length = 8670 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 351 ctaataaaagcatggtttagagaa 374 |||||||||||||| ||||||||| Sbjct: 2005 ctaataaaagcatgttttagagaa 2028
>emb|BX629354.1|CNS09SBQ Tetraodon nigroviridis BAC sequence Length = 95048 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 ggtgcctcgccgcgctccca 110 |||||||||||||||||||| Sbjct: 80133 ggtgcctcgccgcgctccca 80114
>gb|AE015927.1| Clostridium tetani E88, complete genome Length = 2799251 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 529 aaaagataaacaagatgaat 548 |||||||||||||||||||| Sbjct: 1072494 aaaagataaacaagatgaat 1072513
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 cgtcgagttcgagcccgagg 92 |||||||||||||||||||| Sbjct: 2405715 cgtcgagttcgagcccgagg 2405734
>gb|AY552545.2| Uncultured marine gamma proteobacterium EBAC20E09 clone EBAC20E09, complete sequence Length = 144407 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 529 aaaagataaacaagatgaat 548 |||||||||||||||||||| Sbjct: 140922 aaaagataaacaagatgaat 140941
>emb|AL824707.7| Mouse DNA sequence from clone RP23-95O1 on chromosome 4, complete sequence Length = 225002 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 528 gaaaagataaacaagatgaa 547 |||||||||||||||||||| Sbjct: 5417 gaaaagataaacaagatgaa 5398 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,037,821 Number of Sequences: 3902068 Number of extensions: 5037821 Number of successful extensions: 102004 Number of sequences better than 10.0: 76 Number of HSP's better than 10.0 without gapping: 78 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 101392 Number of HSP's gapped (non-prelim): 585 length of query: 648 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 625 effective length of database: 17,143,297,704 effective search space: 10714561065000 effective search space used: 10714561065000 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
