ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags1o07 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_475955.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2169 Score = 694 bits (350), Expect = 0.0 Identities = 548/614 (89%) Strand = Plus / Plus Query: 9 cacattgttcagcaaccagccttcactgcttttattgatagtctgcagcctcgtttcagg 68 ||||||||||| || ||||| |||||| | |||||||| ||||||||||| ||||||||| Sbjct: 550 cacattgttcaacagccagcgttcactacctttattgacagtctgcagccacgtttcagg 609 Query: 69 gttgctgatgttgatgcaatggaggtggaggtgtatgctgtttatcagaaagaaaaagag 128 |||| |||||||| ||||||||| |||||||||||||||||| ||||||||||| || Sbjct: 610 gttgtagatgttgagacaatggagggggaggtgtatgctgtttaccagaaagaaaaggaa 669 Query: 129 aaccttttgcaagcattcagcaccatgcctggaaggatcagcctcactattggattgtgg 188 ||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 670 aacctcacgcaagcattcagcactatgcctggaaggatcagcctcaccattggattgtgg 729 Query: 189 acaactagtcaaactcttggctatgtttcagtttctgggcagttcattgactctgaatgg 248 |||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||| ||| Sbjct: 730 acaactagccaaactcttggctatgtttcactttctgggcagtttattgactctgagtgg 789 Query: 249 aaattacatcgaagaatgcttagcttcatgatggtgtcttcgcctcattcggagaatgca 308 || |||||||||||||||| | |||||||||||||||||| |||||||| ||||||||| Sbjct: 790 aagatacatcgaagaatgctaaacttcatgatggtgtcttctcctcattcagagaatgca 849 Query: 309 cttagtgaagctattagctcaagccttactgactggagtatgaaggagaagctatttacc 368 ||||||||||||||||| |||||||| | ||||||| ||||||||| || || || ||| Sbjct: 850 cttagtgaagctattagtgcaagcctttcggactggaatatgaaggacaaactgttcacc 909 Query: 369 atcacgttggataatgattgctcatctcatgatatatacagtgcaaatcttagagattat 428 ||||| ||||| |||||||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 910 atcacattggacaatgattgctcatcacatgatatatacagtgcaaatctgagggattat 969 Query: 429 ctctccagtaagaataaccacatgcttaagggccagctatttgttgtgaggtgctatgcc 488 ||||||| ||||| |||| |||||| |||||||| || |||||||| ||||| |||||| Sbjct: 970 ctctccaacaagaacaacctcatgctcaagggccaactgtttgttgtaaggtgttatgcc 1029 Query: 489 catatcctgaatgcagttgcagaagatgtcattgctttaatccacggtgtcatctacagt 548 |||||||||||||||||||| | ||||||||||||| |||||| ||||||||||||| | Sbjct: 1030 catatcctgaatgcagttgctcaggatgtcattgcttcaatccatggtgtcatctacaat 1089 Query: 549 atccgtgaaagcataaagttcataaaagcttctcctagtcgcgaggaaaagttcgctgag 608 |||||||||||||| |||||||||||||||||||||| || ||||| ||||| || ||| Sbjct: 1090 atccgtgaaagcatcaagttcataaaagcttctcctacccgtgaggagaagtttgcagag 1149 Query: 609 attgctctgcagct 622 |||||||||||||| Sbjct: 1150 attgctctgcagct 1163
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 694 bits (350), Expect = 0.0 Identities = 548/614 (89%) Strand = Plus / Plus Query: 9 cacattgttcagcaaccagccttcactgcttttattgatagtctgcagcctcgtttcagg 68 ||||||||||| || ||||| |||||| | |||||||| ||||||||||| ||||||||| Sbjct: 28801389 cacattgttcaacagccagcgttcactacctttattgacagtctgcagccacgtttcagg 28801448 Query: 69 gttgctgatgttgatgcaatggaggtggaggtgtatgctgtttatcagaaagaaaaagag 128 |||| |||||||| ||||||||| |||||||||||||||||| ||||||||||| || Sbjct: 28801449 gttgtagatgttgagacaatggagggggaggtgtatgctgtttaccagaaagaaaaggaa 28801508 Query: 129 aaccttttgcaagcattcagcaccatgcctggaaggatcagcctcactattggattgtgg 188 ||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 28801509 aacctcacgcaagcattcagcactatgcctggaaggatcagcctcaccattggattgtgg 28801568 Query: 189 acaactagtcaaactcttggctatgtttcagtttctgggcagttcattgactctgaatgg 248 |||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||| ||| Sbjct: 28801569 acaactagccaaactcttggctatgtttcactttctgggcagtttattgactctgagtgg 28801628 Query: 249 aaattacatcgaagaatgcttagcttcatgatggtgtcttcgcctcattcggagaatgca 308 || |||||||||||||||| | |||||||||||||||||| |||||||| ||||||||| Sbjct: 28801629 aagatacatcgaagaatgctaaacttcatgatggtgtcttctcctcattcagagaatgca 28801688 Query: 309 cttagtgaagctattagctcaagccttactgactggagtatgaaggagaagctatttacc 368 ||||||||||||||||| |||||||| | ||||||| ||||||||| || || || ||| Sbjct: 28801689 cttagtgaagctattagtgcaagcctttcggactggaatatgaaggacaaactgttcacc 28801748 Query: 369 atcacgttggataatgattgctcatctcatgatatatacagtgcaaatcttagagattat 428 ||||| ||||| |||||||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 28801749 atcacattggacaatgattgctcatcacatgatatatacagtgcaaatctgagggattat 28801808 Query: 429 ctctccagtaagaataaccacatgcttaagggccagctatttgttgtgaggtgctatgcc 488 ||||||| ||||| |||| |||||| |||||||| || |||||||| ||||| |||||| Sbjct: 28801809 ctctccaacaagaacaacctcatgctcaagggccaactgtttgttgtaaggtgttatgcc 28801868 Query: 489 catatcctgaatgcagttgcagaagatgtcattgctttaatccacggtgtcatctacagt 548 |||||||||||||||||||| | ||||||||||||| |||||| ||||||||||||| | Sbjct: 28801869 catatcctgaatgcagttgctcaggatgtcattgcttcaatccatggtgtcatctacaat 28801928 Query: 549 atccgtgaaagcataaagttcataaaagcttctcctagtcgcgaggaaaagttcgctgag 608 |||||||||||||| |||||||||||||||||||||| || ||||| ||||| || ||| Sbjct: 28801929 atccgtgaaagcatcaagttcataaaagcttctcctacccgtgaggagaagtttgcagag 28801988 Query: 609 attgctctgcagct 622 |||||||||||||| Sbjct: 28801989 attgctctgcagct 28802002 Score = 656 bits (331), Expect = 0.0 Identities = 541/611 (88%) Strand = Plus / Minus Query: 9 cacattgttcagcaaccagccttcactgcttttattgatagtctgcagcctcgtttcagg 68 ||||||||||| || |||||||||||| | |||||||| ||||||||||| ||||||||| Sbjct: 8380343 cacattgttcaacagccagccttcactacctttattgacagtctgcagccacgtttcagg 8380284 Query: 69 gttgctgatgttgatgcaatggaggtggaggtgtatgctgtttatcagaaagaaaaagag 128 |||| |||||||| |||||||| |||||||||||||||||| ||||||||||| || Sbjct: 8380283 gttgtagatgttgagacaatggagtgggaggtgtatgctgtttaccagaaagaaaaggaa 8380224 Query: 129 aaccttttgcaagcattcagcaccatgcctggaaggatcagcctcactattggattgtgg 188 ||||| |||||||||||| ||| ||||||||||||||||||||| |||||||||||||| Sbjct: 8380223 aacctcatgcaagcattcaacactatgcctggaaggatcagcctcgctattggattgtgg 8380164 Query: 189 acaactagtcaaactcttggctatgtttcagtttctgggcagttcattgactctgaatgg 248 |||||||| ||||||||||||||||||||| || |||||||||| ||||||||||| ||| Sbjct: 8380163 acaactagccaaactcttggctatgtttcacttgctgggcagtttattgactctgagtgg 8380104 Query: 249 aaattacatcgaagaatgcttagcttcatgatggtgtcttcgcctcattcggagaatgca 308 || | |||||||||||||| | |||||||||||||||||| |||||||| ||||||||| Sbjct: 8380103 aagatgcatcgaagaatgctaaacttcatgatggtgtcttctcctcattcagagaatgca 8380044 Query: 309 cttagtgaagctattagctcaagccttactgactggagtatgaaggagaagctatttacc 368 ||||||||||||||||| |||||||| | ||||||| ||||||||| || ||||| ||| Sbjct: 8380043 cttagtgaagctattagtacaagcctttcagactggaatatgaaggacaaactattcacc 8379984 Query: 369 atcacgttggataatgattgctcatctcatgatatatacagtgcaaatcttagagattat 428 ||||| ||||| |||||||||||||| ||||||||||||||||| ||||| || |||||| Sbjct: 8379983 atcacattggacaatgattgctcatcacatgatatatacagtgcgaatctgagggattat 8379924 Query: 429 ctctccagtaagaataaccacatgcttaagggccagctatttgttgtgaggtgctatgcc 488 ||||||| ||||| |||| |||||| |||||||| ||||||||||| ||||| |||||| Sbjct: 8379923 ctctccaacaagaacaacctcatgctcaagggccaactatttgttgtaaggtgttatgcc 8379864 Query: 489 catatcctgaatgcagttgcagaagatgtcattgctttaatccacggtgtcatctacagt 548 |||||||||||||||||||| | ||||||||||||| ||| || ||||||||||| | | Sbjct: 8379863 catatcctgaatgcagttgctcaggatgtcattgcttcaattcatggtgtcatctataat 8379804 Query: 549 atccgtgaaagcataaagttcataaaagcttctcctagtcgcgaggaaaagttcgctgag 608 ||||| |||||||| ||||||||||||||||||||||| | ||||| ||||| || ||| Sbjct: 8379803 atccgcgaaagcattaagttcataaaagcttctcctagctgtgaggagaagtttgcagag 8379744 Query: 609 attgctctgca 619 ||||||||||| Sbjct: 8379743 attgctctgca 8379733 Score = 287 bits (145), Expect = 2e-74 Identities = 483/595 (81%), Gaps = 3/595 (0%) Strand = Plus / Plus Query: 29 cttcactgcttttattgatagtctgcagcctcgtttcagggttgctgatgttgatgcaat 88 ||||||||| ||||||| ||| ||||||||||||||||||| ||||||||| |||| Sbjct: 28810641 cttcactgcatttattgggagtttgcagcctcgtttcagggtgatagatgttgatacaat 28810700 Query: 89 ggaggtggaggtgtatgctgtttatcagaaagaaaaagagaaccttttgcaagcattcag 148 || | ||||| || |||||||||||||||||| || ||||| |||| | ||||| Sbjct: 28810701 tgaaggacaggtgcattctgtttatcagaaagaaagggaaaacctgatgcatgtgttcag 28810760 Query: 149 caccatgcctggaaggatcagcctcactattggattgtggacaactagtcaaactcttgg 208 ||| |||||||||| |||||||||||| | |||||||| |||||||||| |||||||| Sbjct: 28810761 cactgtgcctggaagaatcagcctcactgtaagattgtgggcaactagtcagactcttgg 28810820 Query: 209 ctatgtttcagtttctgggcagttcattgactctgaatggaaattacatcgaagaatgct 268 ||| ||||| || | | || || |||||| ||||||||| | | |||||||||||| | Sbjct: 28810821 atatatttcacttgcagcacaatttattgacactgaatggagagtgcatcgaagaatggt 28810880 Query: 269 tagcttcatgatggtgtcttcgcctcattcggagaatgcacttagtgaagctattagctc 328 || |||||||||||| |||||||||||||| |||||| |||||||||||||||| || | Sbjct: 28810881 taacttcatgatggtctcttcgcctcattcagagaattcacttagtgaagctatcagtac 28810940 Query: 329 aagccttactgactggagtatgaaggagaagctatttaccatcacgttggataatgattg 388 |||||| | ||||||| |||||||| |||||||| |||||||| |||||||||||| Sbjct: 28810941 aagcctctcagactggaacatgaaggacaagctattcaccatcacattggataatgatcc 28811000 Query: 389 ctcatctcatgatatatacagtgcaaatcttagagattatctctccagtaaga---ataa 445 ||| || |||||||| ||||||||||| | | | | |||||||||| |||| | || Sbjct: 28811001 ctcgtcacatgatatctacagtgcaaacatgataaactatctctccaacaagaaggacaa 28811060 Query: 446 ccacatgcttaagggccagctatttgttgtgaggtgctatgcccatatcctgaatgcagt 505 | |||| | ||||||||| | ||||||||||| || ||||| ||||| ||||| |||| Sbjct: 28811061 catcatgatcaagggccagttgtttgttgtgagatgttatgcacatatactgaacacagt 28811120 Query: 506 tgcagaagatgtcattgctttaatccacggtgtcatctacagtatccgtgaaagcataaa 565 ||| ||||||||||||||| | || |||| ||||| |||||||||||| ||||| Sbjct: 28811121 cgcacaagatgtcattgcttctgttcatagtgtgatctatcatatccgtgaaagtataaa 28811180 Query: 566 gttcataaaagcttctcctagtcgcgaggaaaagttcgctgagattgctctgcag 620 |||||||||||||||| || | |||||| ||||| || || |||||||||||| Sbjct: 28811181 gttcataaaagcttcttctgtccacgaggataagtttgcggaaattgctctgcag 28811235
>gb|AC134929.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0035N21, complete sequence Length = 128331 Score = 694 bits (350), Expect = 0.0 Identities = 548/614 (89%) Strand = Plus / Minus Query: 9 cacattgttcagcaaccagccttcactgcttttattgatagtctgcagcctcgtttcagg 68 ||||||||||| || ||||| |||||| | |||||||| ||||||||||| ||||||||| Sbjct: 72078 cacattgttcaacagccagcgttcactacctttattgacagtctgcagccacgtttcagg 72019 Query: 69 gttgctgatgttgatgcaatggaggtggaggtgtatgctgtttatcagaaagaaaaagag 128 |||| |||||||| ||||||||| |||||||||||||||||| ||||||||||| || Sbjct: 72018 gttgtagatgttgagacaatggagggggaggtgtatgctgtttaccagaaagaaaaggaa 71959 Query: 129 aaccttttgcaagcattcagcaccatgcctggaaggatcagcctcactattggattgtgg 188 ||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 71958 aacctcacgcaagcattcagcactatgcctggaaggatcagcctcaccattggattgtgg 71899 Query: 189 acaactagtcaaactcttggctatgtttcagtttctgggcagttcattgactctgaatgg 248 |||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||| ||| Sbjct: 71898 acaactagccaaactcttggctatgtttcactttctgggcagtttattgactctgagtgg 71839 Query: 249 aaattacatcgaagaatgcttagcttcatgatggtgtcttcgcctcattcggagaatgca 308 || |||||||||||||||| | |||||||||||||||||| |||||||| ||||||||| Sbjct: 71838 aagatacatcgaagaatgctaaacttcatgatggtgtcttctcctcattcagagaatgca 71779 Query: 309 cttagtgaagctattagctcaagccttactgactggagtatgaaggagaagctatttacc 368 ||||||||||||||||| |||||||| | ||||||| ||||||||| || || || ||| Sbjct: 71778 cttagtgaagctattagtgcaagcctttcggactggaatatgaaggacaaactgttcacc 71719 Query: 369 atcacgttggataatgattgctcatctcatgatatatacagtgcaaatcttagagattat 428 ||||| ||||| |||||||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 71718 atcacattggacaatgattgctcatcacatgatatatacagtgcaaatctgagggattat 71659 Query: 429 ctctccagtaagaataaccacatgcttaagggccagctatttgttgtgaggtgctatgcc 488 ||||||| ||||| |||| |||||| |||||||| || |||||||| ||||| |||||| Sbjct: 71658 ctctccaacaagaacaacctcatgctcaagggccaactgtttgttgtaaggtgttatgcc 71599 Query: 489 catatcctgaatgcagttgcagaagatgtcattgctttaatccacggtgtcatctacagt 548 |||||||||||||||||||| | ||||||||||||| |||||| ||||||||||||| | Sbjct: 71598 catatcctgaatgcagttgctcaggatgtcattgcttcaatccatggtgtcatctacaat 71539 Query: 549 atccgtgaaagcataaagttcataaaagcttctcctagtcgcgaggaaaagttcgctgag 608 |||||||||||||| |||||||||||||||||||||| || ||||| ||||| || ||| Sbjct: 71538 atccgtgaaagcatcaagttcataaaagcttctcctacccgtgaggagaagtttgcagag 71479 Query: 609 attgctctgcagct 622 |||||||||||||| Sbjct: 71478 attgctctgcagct 71465 Score = 287 bits (145), Expect = 2e-74 Identities = 483/595 (81%), Gaps = 3/595 (0%) Strand = Plus / Minus Query: 29 cttcactgcttttattgatagtctgcagcctcgtttcagggttgctgatgttgatgcaat 88 ||||||||| ||||||| ||| ||||||||||||||||||| ||||||||| |||| Sbjct: 62826 cttcactgcatttattgggagtttgcagcctcgtttcagggtgatagatgttgatacaat 62767 Query: 89 ggaggtggaggtgtatgctgtttatcagaaagaaaaagagaaccttttgcaagcattcag 148 || | ||||| || |||||||||||||||||| || ||||| |||| | ||||| Sbjct: 62766 tgaaggacaggtgcattctgtttatcagaaagaaagggaaaacctgatgcatgtgttcag 62707 Query: 149 caccatgcctggaaggatcagcctcactattggattgtggacaactagtcaaactcttgg 208 ||| |||||||||| |||||||||||| | |||||||| |||||||||| |||||||| Sbjct: 62706 cactgtgcctggaagaatcagcctcactgtaagattgtgggcaactagtcagactcttgg 62647 Query: 209 ctatgtttcagtttctgggcagttcattgactctgaatggaaattacatcgaagaatgct 268 ||| ||||| || | | || || |||||| ||||||||| | | |||||||||||| | Sbjct: 62646 atatatttcacttgcagcacaatttattgacactgaatggagagtgcatcgaagaatggt 62587 Query: 269 tagcttcatgatggtgtcttcgcctcattcggagaatgcacttagtgaagctattagctc 328 || |||||||||||| |||||||||||||| |||||| |||||||||||||||| || | Sbjct: 62586 taacttcatgatggtctcttcgcctcattcagagaattcacttagtgaagctatcagtac 62527 Query: 329 aagccttactgactggagtatgaaggagaagctatttaccatcacgttggataatgattg 388 |||||| | ||||||| |||||||| |||||||| |||||||| |||||||||||| Sbjct: 62526 aagcctctcagactggaacatgaaggacaagctattcaccatcacattggataatgatcc 62467 Query: 389 ctcatctcatgatatatacagtgcaaatcttagagattatctctccagtaaga---ataa 445 ||| || |||||||| ||||||||||| | | | | |||||||||| |||| | || Sbjct: 62466 ctcgtcacatgatatctacagtgcaaacatgataaactatctctccaacaagaaggacaa 62407 Query: 446 ccacatgcttaagggccagctatttgttgtgaggtgctatgcccatatcctgaatgcagt 505 | |||| | ||||||||| | ||||||||||| || ||||| ||||| ||||| |||| Sbjct: 62406 catcatgatcaagggccagttgtttgttgtgagatgttatgcacatatactgaacacagt 62347 Query: 506 tgcagaagatgtcattgctttaatccacggtgtcatctacagtatccgtgaaagcataaa 565 ||| ||||||||||||||| | || |||| ||||| |||||||||||| ||||| Sbjct: 62346 cgcacaagatgtcattgcttctgttcatagtgtgatctatcatatccgtgaaagtataaa 62287 Query: 566 gttcataaaagcttctcctagtcgcgaggaaaagttcgctgagattgctctgcag 620 |||||||||||||||| || | |||||| ||||| || || |||||||||||| Sbjct: 62286 gttcataaaagcttcttctgtccacgaggataagtttgcggaaattgctctgcag 62232
>gb|AC096689.5| Oryza sativa chromosome 3 BAC OSJNBa0027J18 genomic sequence, complete sequence Length = 112892 Score = 678 bits (342), Expect = 0.0 Identities = 546/614 (88%) Strand = Plus / Plus Query: 9 cacattgttcagcaaccagccttcactgcttttattgatagtctgcagcctcgtttcagg 68 ||||||||||| || |||||||||||| | |||||||| ||||||||||| ||||||||| Sbjct: 100733 cacattgttcaacagccagccttcactacctttattgacagtctgcagccacgtttcagg 100792 Query: 69 gttgctgatgttgatgcaatggaggtggaggtgtatgctgtttatcagaaagaaaaagag 128 |||| |||||||| ||||||||| |||||||||||||||||| ||||||||||| || Sbjct: 100793 gttgtagatgttgagacaatggagggggaggtgtatgctgtttaccagaaagaaaaggaa 100852 Query: 129 aaccttttgcaagcattcagcaccatgcctggaaggatcagcctcactattggattgtgg 188 ||||| |||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 100853 aacctcatgcaagcattcagcactatgcctggaaggattagcctcactattggattgtgg 100912 Query: 189 acaactagtcaaactcttggctatgtttcagtttctgggcagttcattgactctgaatgg 248 |||||||| ||||||||||||||||||||| || |||||||||| ||||||||||| ||| Sbjct: 100913 acaactagccaaactcttggctatgtttcacttgctgggcagtttattgactctgagtgg 100972 Query: 249 aaattacatcgaagaatgcttagcttcatgatggtgtcttcgcctcattcggagaatgca 308 || |||||||||||||||| | |||||||||||||||||| |||||||| ||||||||| Sbjct: 100973 aagatacatcgaagaatgctaaacttcatgatggtgtcttctcctcattcagagaatgca 101032 Query: 309 cttagtgaagctattagctcaagccttactgactggagtatgaaggagaagctatttacc 368 ||||||||||||||||| |||||||| | ||||||| ||||||||| || ||||| ||| Sbjct: 101033 cttagtgaagctattagtacaagcctttcagactggaatatgaaggacaaactattcacc 101092 Query: 369 atcacgttggataatgattgctcatctcatgatatatacagtgcaaatcttagagattat 428 ||||| ||||| |||||||||||||| ||||||||||| ||||| ||||| || |||||| Sbjct: 101093 atcacattggacaatgattgctcatcacatgatatatatagtgcgaatctgagggattat 101152 Query: 429 ctctccagtaagaataaccacatgcttaagggccagctatttgttgtgaggtgctatgcc 488 ||||||| ||||| |||| |||||| |||||||| || |||||||| ||||| |||||| Sbjct: 101153 ctctccaacaagaacaacctcatgctcaagggccaactgtttgttgtaaggtgttatgcc 101212 Query: 489 catatcctgaatgcagttgcagaagatgtcattgctttaatccacggtgtcatctacagt 548 |||||||||||||||||||| | ||||| ||||||| ||| || ||||||||||| | | Sbjct: 101213 catatcctgaatgcagttgctcaggatgttattgcttcaattcatggtgtcatctataat 101272 Query: 549 atccgtgaaagcataaagttcataaaagcttctcctagtcgcgaggaaaagttcgctgag 608 |||||||||||||| ||||||||||||||||||||||| || ||||| ||||| || ||| Sbjct: 101273 atccgtgaaagcattaagttcataaaagcttctcctagccgtgaggagaagtttgcagag 101332 Query: 609 attgctctgcagct 622 |||||||||||||| Sbjct: 101333 attgctctgcagct 101346
>gb|AC103550.13| Oryza sativa chromosome 3 BAC OSJNBa0079G12 genomic sequence, complete sequence Length = 163712 Score = 678 bits (342), Expect = 0.0 Identities = 546/614 (88%) Strand = Plus / Plus Query: 9 cacattgttcagcaaccagccttcactgcttttattgatagtctgcagcctcgtttcagg 68 ||||||||||| || |||||||||||| | |||||||| ||||||||||| ||||||||| Sbjct: 22649 cacattgttcaacagccagccttcactacctttattgacagtctgcagccacgtttcagg 22708 Query: 69 gttgctgatgttgatgcaatggaggtggaggtgtatgctgtttatcagaaagaaaaagag 128 |||| |||||||| ||||||||| |||||||||||||||||| ||||||||||| || Sbjct: 22709 gttgtagatgttgagacaatggagggggaggtgtatgctgtttaccagaaagaaaaggaa 22768 Query: 129 aaccttttgcaagcattcagcaccatgcctggaaggatcagcctcactattggattgtgg 188 ||||| |||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 22769 aacctcatgcaagcattcagcactatgcctggaaggattagcctcactattggattgtgg 22828 Query: 189 acaactagtcaaactcttggctatgtttcagtttctgggcagttcattgactctgaatgg 248 |||||||| ||||||||||||||||||||| || |||||||||| ||||||||||| ||| Sbjct: 22829 acaactagccaaactcttggctatgtttcacttgctgggcagtttattgactctgagtgg 22888 Query: 249 aaattacatcgaagaatgcttagcttcatgatggtgtcttcgcctcattcggagaatgca 308 || |||||||||||||||| | |||||||||||||||||| |||||||| ||||||||| Sbjct: 22889 aagatacatcgaagaatgctaaacttcatgatggtgtcttctcctcattcagagaatgca 22948 Query: 309 cttagtgaagctattagctcaagccttactgactggagtatgaaggagaagctatttacc 368 ||||||||||||||||| |||||||| | ||||||| ||||||||| || ||||| ||| Sbjct: 22949 cttagtgaagctattagtacaagcctttcagactggaatatgaaggacaaactattcacc 23008 Query: 369 atcacgttggataatgattgctcatctcatgatatatacagtgcaaatcttagagattat 428 ||||| ||||| |||||||||||||| ||||||||||| ||||| ||||| || |||||| Sbjct: 23009 atcacattggacaatgattgctcatcacatgatatatatagtgcgaatctgagggattat 23068 Query: 429 ctctccagtaagaataaccacatgcttaagggccagctatttgttgtgaggtgctatgcc 488 ||||||| ||||| |||| |||||| |||||||| || |||||||| ||||| |||||| Sbjct: 23069 ctctccaacaagaacaacctcatgctcaagggccaactgtttgttgtaaggtgttatgcc 23128 Query: 489 catatcctgaatgcagttgcagaagatgtcattgctttaatccacggtgtcatctacagt 548 |||||||||||||||||||| | ||||| ||||||| ||| || ||||||||||| | | Sbjct: 23129 catatcctgaatgcagttgctcaggatgttattgcttcaattcatggtgtcatctataat 23188 Query: 549 atccgtgaaagcataaagttcataaaagcttctcctagtcgcgaggaaaagttcgctgag 608 |||||||||||||| ||||||||||||||||||||||| || ||||| ||||| || ||| Sbjct: 23189 atccgtgaaagcattaagttcataaaagcttctcctagccgtgaggagaagtttgcagag 23248 Query: 609 attgctctgcagct 622 |||||||||||||| Sbjct: 23249 attgctctgcagct 23262
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 678 bits (342), Expect = 0.0 Identities = 546/614 (88%) Strand = Plus / Minus Query: 9 cacattgttcagcaaccagccttcactgcttttattgatagtctgcagcctcgtttcagg 68 ||||||||||| || |||||||||||| | |||||||| ||||||||||| ||||||||| Sbjct: 29748728 cacattgttcaacagccagccttcactacctttattgacagtctgcagccacgtttcagg 29748669 Query: 69 gttgctgatgttgatgcaatggaggtggaggtgtatgctgtttatcagaaagaaaaagag 128 |||| |||||||| ||||||||| |||||||||||||||||| ||||||||||| || Sbjct: 29748668 gttgtagatgttgagacaatggagggggaggtgtatgctgtttaccagaaagaaaaggaa 29748609 Query: 129 aaccttttgcaagcattcagcaccatgcctggaaggatcagcctcactattggattgtgg 188 ||||| |||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 29748608 aacctcatgcaagcattcagcactatgcctggaaggattagcctcactattggattgtgg 29748549 Query: 189 acaactagtcaaactcttggctatgtttcagtttctgggcagttcattgactctgaatgg 248 |||||||| ||||||||||||||||||||| || |||||||||| ||||||||||| ||| Sbjct: 29748548 acaactagccaaactcttggctatgtttcacttgctgggcagtttattgactctgagtgg 29748489 Query: 249 aaattacatcgaagaatgcttagcttcatgatggtgtcttcgcctcattcggagaatgca 308 || |||||||||||||||| | |||||||||||||||||| |||||||| ||||||||| Sbjct: 29748488 aagatacatcgaagaatgctaaacttcatgatggtgtcttctcctcattcagagaatgca 29748429 Query: 309 cttagtgaagctattagctcaagccttactgactggagtatgaaggagaagctatttacc 368 ||||||||||||||||| |||||||| | ||||||| ||||||||| || ||||| ||| Sbjct: 29748428 cttagtgaagctattagtacaagcctttcagactggaatatgaaggacaaactattcacc 29748369 Query: 369 atcacgttggataatgattgctcatctcatgatatatacagtgcaaatcttagagattat 428 ||||| ||||| |||||||||||||| ||||||||||| ||||| ||||| || |||||| Sbjct: 29748368 atcacattggacaatgattgctcatcacatgatatatatagtgcgaatctgagggattat 29748309 Query: 429 ctctccagtaagaataaccacatgcttaagggccagctatttgttgtgaggtgctatgcc 488 ||||||| ||||| |||| |||||| |||||||| || |||||||| ||||| |||||| Sbjct: 29748308 ctctccaacaagaacaacctcatgctcaagggccaactgtttgttgtaaggtgttatgcc 29748249 Query: 489 catatcctgaatgcagttgcagaagatgtcattgctttaatccacggtgtcatctacagt 548 |||||||||||||||||||| | ||||| ||||||| ||| || ||||||||||| | | Sbjct: 29748248 catatcctgaatgcagttgctcaggatgttattgcttcaattcatggtgtcatctataat 29748189 Query: 549 atccgtgaaagcataaagttcataaaagcttctcctagtcgcgaggaaaagttcgctgag 608 |||||||||||||| ||||||||||||||||||||||| || ||||| ||||| || ||| Sbjct: 29748188 atccgtgaaagcattaagttcataaaagcttctcctagccgtgaggagaagtttgcagag 29748129 Query: 609 attgctctgcagct 622 |||||||||||||| Sbjct: 29748128 attgctctgcagct 29748115
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 678 bits (342), Expect = 0.0 Identities = 546/614 (88%) Strand = Plus / Minus Query: 9 cacattgttcagcaaccagccttcactgcttttattgatagtctgcagcctcgtttcagg 68 ||||||||||| || |||||||||||| | |||||||| ||||||||||| ||||||||| Sbjct: 29840150 cacattgttcaacagccagccttcactacctttattgacagtctgcagccacgtttcagg 29840091 Query: 69 gttgctgatgttgatgcaatggaggtggaggtgtatgctgtttatcagaaagaaaaagag 128 |||| |||||||| ||||||||| |||||||||||||||||| ||||||||||| || Sbjct: 29840090 gttgtagatgttgagacaatggagggggaggtgtatgctgtttaccagaaagaaaaggaa 29840031 Query: 129 aaccttttgcaagcattcagcaccatgcctggaaggatcagcctcactattggattgtgg 188 ||||| |||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 29840030 aacctcatgcaagcattcagcactatgcctggaaggattagcctcactattggattgtgg 29839971 Query: 189 acaactagtcaaactcttggctatgtttcagtttctgggcagttcattgactctgaatgg 248 |||||||| ||||||||||||||||||||| || |||||||||| ||||||||||| ||| Sbjct: 29839970 acaactagccaaactcttggctatgtttcacttgctgggcagtttattgactctgagtgg 29839911 Query: 249 aaattacatcgaagaatgcttagcttcatgatggtgtcttcgcctcattcggagaatgca 308 || |||||||||||||||| | |||||||||||||||||| |||||||| ||||||||| Sbjct: 29839910 aagatacatcgaagaatgctaaacttcatgatggtgtcttctcctcattcagagaatgca 29839851 Query: 309 cttagtgaagctattagctcaagccttactgactggagtatgaaggagaagctatttacc 368 ||||||||||||||||| |||||||| | ||||||| ||||||||| || ||||| ||| Sbjct: 29839850 cttagtgaagctattagtacaagcctttcagactggaatatgaaggacaaactattcacc 29839791 Query: 369 atcacgttggataatgattgctcatctcatgatatatacagtgcaaatcttagagattat 428 ||||| ||||| |||||||||||||| ||||||||||| ||||| ||||| || |||||| Sbjct: 29839790 atcacattggacaatgattgctcatcacatgatatatatagtgcgaatctgagggattat 29839731 Query: 429 ctctccagtaagaataaccacatgcttaagggccagctatttgttgtgaggtgctatgcc 488 ||||||| ||||| |||| |||||| |||||||| || |||||||| ||||| |||||| Sbjct: 29839730 ctctccaacaagaacaacctcatgctcaagggccaactgtttgttgtaaggtgttatgcc 29839671 Query: 489 catatcctgaatgcagttgcagaagatgtcattgctttaatccacggtgtcatctacagt 548 |||||||||||||||||||| | ||||| ||||||| ||| || ||||||||||| | | Sbjct: 29839670 catatcctgaatgcagttgctcaggatgttattgcttcaattcatggtgtcatctataat 29839611 Query: 549 atccgtgaaagcataaagttcataaaagcttctcctagtcgcgaggaaaagttcgctgag 608 |||||||||||||| ||||||||||||||||||||||| || ||||| ||||| || ||| Sbjct: 29839610 atccgtgaaagcattaagttcataaaagcttctcctagccgtgaggagaagtttgcagag 29839551 Query: 609 attgctctgcagct 622 |||||||||||||| Sbjct: 29839550 attgctctgcagct 29839537
>dbj|AK121128.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023075B19, full insert sequence Length = 3745 Score = 678 bits (342), Expect = 0.0 Identities = 546/614 (88%) Strand = Plus / Plus Query: 9 cacattgttcagcaaccagccttcactgcttttattgatagtctgcagcctcgtttcagg 68 ||||||||||| || |||||||||||| | |||||||| ||||||||||| ||||||||| Sbjct: 1823 cacattgttcaacagccagccttcactacctttattgacagtctgcagccacgtttcagg 1882 Query: 69 gttgctgatgttgatgcaatggaggtggaggtgtatgctgtttatcagaaagaaaaagag 128 |||| |||||||| ||||||||| |||||||||||||||||| ||||||||||| || Sbjct: 1883 gttgtagatgttgagacaatggagggggaggtgtatgctgtttaccagaaagaaaaggaa 1942 Query: 129 aaccttttgcaagcattcagcaccatgcctggaaggatcagcctcactattggattgtgg 188 ||||| |||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 1943 aacctcatgcaagcattcagcactatgcctggaaggattagcctcactattggattgtgg 2002 Query: 189 acaactagtcaaactcttggctatgtttcagtttctgggcagttcattgactctgaatgg 248 |||||||| ||||||||||||||||||||| || |||||||||| ||||||||||| ||| Sbjct: 2003 acaactagccaaactcttggctatgtttcacttgctgggcagtttattgactctgagtgg 2062 Query: 249 aaattacatcgaagaatgcttagcttcatgatggtgtcttcgcctcattcggagaatgca 308 || |||||||||||||||| | |||||||||||||||||| |||||||| ||||||||| Sbjct: 2063 aagatacatcgaagaatgctaaacttcatgatggtgtcttctcctcattcagagaatgca 2122 Query: 309 cttagtgaagctattagctcaagccttactgactggagtatgaaggagaagctatttacc 368 ||||||||||||||||| |||||||| | ||||||| ||||||||| || ||||| ||| Sbjct: 2123 cttagtgaagctattagtacaagcctttcagactggaatatgaaggacaaactattcacc 2182 Query: 369 atcacgttggataatgattgctcatctcatgatatatacagtgcaaatcttagagattat 428 ||||| ||||| |||||||||||||| ||||||||||| ||||| ||||| || |||||| Sbjct: 2183 atcacattggacaatgattgctcatcacatgatatatatagtgcgaatctgagggattat 2242 Query: 429 ctctccagtaagaataaccacatgcttaagggccagctatttgttgtgaggtgctatgcc 488 ||||||| ||||| |||| |||||| |||||||| || |||||||| ||||| |||||| Sbjct: 2243 ctctccaacaagaacaacctcatgctcaagggccaactgtttgttgtaaggtgttatgcc 2302 Query: 489 catatcctgaatgcagttgcagaagatgtcattgctttaatccacggtgtcatctacagt 548 |||||||||||||||||||| | ||||| ||||||| ||| || ||||||||||| | | Sbjct: 2303 catatcctgaatgcagttgctcaggatgttattgcttcaattcatggtgtcatctataat 2362 Query: 549 atccgtgaaagcataaagttcataaaagcttctcctagtcgcgaggaaaagttcgctgag 608 |||||||||||||| ||||||||||||||||||||||| || ||||| ||||| || ||| Sbjct: 2363 atccgtgaaagcattaagttcataaaagcttctcctagccgtgaggagaagtttgcagag 2422 Query: 609 attgctctgcagct 622 |||||||||||||| Sbjct: 2423 attgctctgcagct 2436
>gb|AC105768.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1122_B08, complete sequence Length = 143955 Score = 656 bits (331), Expect = 0.0 Identities = 541/611 (88%) Strand = Plus / Minus Query: 9 cacattgttcagcaaccagccttcactgcttttattgatagtctgcagcctcgtttcagg 68 ||||||||||| || |||||||||||| | |||||||| ||||||||||| ||||||||| Sbjct: 101387 cacattgttcaacagccagccttcactacctttattgacagtctgcagccacgtttcagg 101328 Query: 69 gttgctgatgttgatgcaatggaggtggaggtgtatgctgtttatcagaaagaaaaagag 128 |||| |||||||| |||||||| |||||||||||||||||| ||||||||||| || Sbjct: 101327 gttgtagatgttgagacaatggagtgggaggtgtatgctgtttaccagaaagaaaaggaa 101268 Query: 129 aaccttttgcaagcattcagcaccatgcctggaaggatcagcctcactattggattgtgg 188 ||||| |||||||||||| ||| ||||||||||||||||||||| |||||||||||||| Sbjct: 101267 aacctcatgcaagcattcaacactatgcctggaaggatcagcctcgctattggattgtgg 101208 Query: 189 acaactagtcaaactcttggctatgtttcagtttctgggcagttcattgactctgaatgg 248 |||||||| ||||||||||||||||||||| || |||||||||| ||||||||||| ||| Sbjct: 101207 acaactagccaaactcttggctatgtttcacttgctgggcagtttattgactctgagtgg 101148 Query: 249 aaattacatcgaagaatgcttagcttcatgatggtgtcttcgcctcattcggagaatgca 308 || | |||||||||||||| | |||||||||||||||||| |||||||| ||||||||| Sbjct: 101147 aagatgcatcgaagaatgctaaacttcatgatggtgtcttctcctcattcagagaatgca 101088 Query: 309 cttagtgaagctattagctcaagccttactgactggagtatgaaggagaagctatttacc 368 ||||||||||||||||| |||||||| | ||||||| ||||||||| || ||||| ||| Sbjct: 101087 cttagtgaagctattagtacaagcctttcagactggaatatgaaggacaaactattcacc 101028 Query: 369 atcacgttggataatgattgctcatctcatgatatatacagtgcaaatcttagagattat 428 ||||| ||||| |||||||||||||| ||||||||||||||||| ||||| || |||||| Sbjct: 101027 atcacattggacaatgattgctcatcacatgatatatacagtgcgaatctgagggattat 100968 Query: 429 ctctccagtaagaataaccacatgcttaagggccagctatttgttgtgaggtgctatgcc 488 ||||||| ||||| |||| |||||| |||||||| ||||||||||| ||||| |||||| Sbjct: 100967 ctctccaacaagaacaacctcatgctcaagggccaactatttgttgtaaggtgttatgcc 100908 Query: 489 catatcctgaatgcagttgcagaagatgtcattgctttaatccacggtgtcatctacagt 548 |||||||||||||||||||| | ||||||||||||| ||| || ||||||||||| | | Sbjct: 100907 catatcctgaatgcagttgctcaggatgtcattgcttcaattcatggtgtcatctataat 100848 Query: 549 atccgtgaaagcataaagttcataaaagcttctcctagtcgcgaggaaaagttcgctgag 608 ||||| |||||||| ||||||||||||||||||||||| | ||||| ||||| || ||| Sbjct: 100847 atccgcgaaagcattaagttcataaaagcttctcctagctgtgaggagaagtttgcagag 100788 Query: 609 attgctctgca 619 ||||||||||| Sbjct: 100787 attgctctgca 100777
>gb|DQ115031.1| Saccharum officinarum clone SCCCCL5004E06 transposon activator-like, partial sequence Length = 2148 Score = 545 bits (275), Expect = e-152 Identities = 530/615 (86%) Strand = Plus / Plus Query: 9 cacattgttcagcaaccagccttcactgcttttattgatagtctgcagcctcgtttcagg 68 ||||||||||| || || |||| ||| ||||||||| ||||||||||||||||||| | Sbjct: 252 cacattgttcaacagtcatcctttactaattttattgagagtctgcagcctcgtttcaag 311 Query: 69 gttgctgatgttgatgcaatggaggtggaggtgtatgctgtttatcagaaagaaaaagag 128 |||| ||||| || ||||||| | |||||||||||||||| ||||||| ||||||| Sbjct: 312 gttgtagatgtggagacaatggaaggagaggtgtatgctgttttccagaaagcaaaagag 371 Query: 129 aaccttttgcaagcattcagcaccatgcctggaaggatcagcctcactattggattgtgg 188 ||||| ||||||||||||||||| ||||| |||||||||||||||||||| ||| | ||| Sbjct: 372 aacctgttgcaagcattcagcactatgccaggaaggatcagcctcactataggactctgg 431 Query: 189 acaactagtcaaactcttggctatgtttcagtttctgggcagttcattgactctgaatgg 248 ||||| ||||| ||||||||||||||||| || |||||||||| ||||||||||| ||| Sbjct: 432 acaaccagtcagactcttggctatgtttctcttgctgggcagtttattgactctgattgg 491 Query: 249 aaattacatcgaagaatgcttagcttcatgatggtgtcttcgcctcattcggagaatgca 308 ||| | || ||||||||||| | |||||||||||||||||| |||||||| ||||||||| Sbjct: 492 aaagtgcaccgaagaatgctcaacttcatgatggtgtcttctcctcattcagagaatgca 551 Query: 309 cttagtgaagctattagctcaagccttactgactggagtatgaaggagaagctatttacc 368 |||||||||||||||||||| |||||| | || |||| ||||||||| ||||| || || Sbjct: 552 cttagtgaagctattagctcgagcctttcggagtggaatatgaaggacaagctgttcact 611 Query: 369 atcacgttggataatgattgctcatctcatgatatatacagtgcaaatcttagagattat 428 ||||| |||||||| |||||||| || |||||||| ||||||||||||||||| ||| | Sbjct: 612 atcacattggataacgattgctcttcccatgatatttacagtgcaaatcttagggatcac 671 Query: 429 ctctccagtaagaataaccacatgcttaagggccagctatttgttgtgaggtgctatgcc 488 ||||||| |||||| |||| |||||||||||| ||||| |||||||||||||||||||| Sbjct: 672 ctctccaataagaacaacctcatgcttaagggacagctctttgttgtgaggtgctatgct 731 Query: 489 catatcctgaatgcagttgcagaagatgtcattgctttaatccacggtgtcatctacagt 548 ||||||||||||| |||||| | ||||| ||||||| || ||||| || || |||| Sbjct: 732 catatcctgaatgtagttgctcaggatgtaattgcttcgattcacggcgtgatttacaac 791 Query: 549 atccgtgaaagcataaagttcataaaagcttctcctagtcgcgaggaaaagttcgctgag 608 |||||||| || || |||||||||||||||||||| || || ||||| ||||| |||||| Sbjct: 792 atccgtgagagtatcaagttcataaaagcttctccaagccgtgaggagaagtttgctgag 851 Query: 609 attgctctgcagctg 623 |||||| |||||||| Sbjct: 852 attgctgtgcagctg 866
>gb|DQ115041.1| Saccharum officinarum clone SCEQLR1029C04 transposon activator-like, partial sequence Length = 1828 Score = 521 bits (263), Expect = e-145 Identities = 494/571 (86%) Strand = Plus / Plus Query: 53 gcagcctcgtttcagggttgctgatgttgatgcaatggaggtggaggtgtatgctgttta 112 |||||||||||||| ||||| ||||| || ||||||| | |||||||||||||||| Sbjct: 1 gcagcctcgtttcaaggttgtagatgtggagacaatggaaggagaggtgtatgctgtttt 60 Query: 113 tcagaaagaaaaagagaaccttttgcaagcattcagcaccatgcctggaaggatcagcct 172 ||||||| |||||||||||| ||||||||||||||||| ||||| |||||||||||||| Sbjct: 61 ccagaaagcaaaagagaacctgttgcaagcattcagcactatgccaggaaggatcagcct 120 Query: 173 cactattggattgtggacaactagtcaaactcttggctatgtttcagtttctgggcagtt 232 |||||| ||| | |||||||| ||||| ||||||||||||||||| || |||||||||| Sbjct: 121 cactataggactctggacaaccagtcagactcttggctatgtttctcttgctgggcagtt 180 Query: 233 cattgactctgaatggaaattacatcgaagaatgcttagcttcatgatggtgtcttcgcc 292 ||||||||||| |||||| | || ||||||||||| | |||||||||||||||||| || Sbjct: 181 tattgactctgattggaaagtgcaccgaagaatgctcaacttcatgatggtgtcttctcc 240 Query: 293 tcattcggagaatgcacttagtgaagctattagctcaagccttactgactggagtatgaa 352 |||||| ||||||||||||||||||||||||||||| |||||| | || |||| |||||| Sbjct: 241 tcattcagagaatgcacttagtgaagctattagctcgagcctttcggagtggaatatgaa 300 Query: 353 ggagaagctatttaccatcacgttggataatgattgctcatctcatgatatatacagtgc 412 ||| ||||| || || ||||| |||||||| |||||||| || |||||||| |||||||| Sbjct: 301 ggacaagctgttcactatcacattggataacgattgctcttcccatgatatttacagtgc 360 Query: 413 aaatcttagagattatctctccagtaagaataaccacatgcttaagggccagctatttgt 472 ||||||||| ||| | ||||||| |||||| |||| |||||||||||| ||||| ||||| Sbjct: 361 aaatcttagggatcacctctccaataagaacaacctcatgcttaagggacagctctttgt 420 Query: 473 tgtgaggtgctatgcccatatcctgaatgcagttgcagaagatgtcattgctttaatcca 532 ||||||||||||||| ||||||||||||| |||||| | ||||| ||||||| || || Sbjct: 421 tgtgaggtgctatgctcatatcctgaatgtagttgctcaggatgtaattgcttcgattca 480 Query: 533 cggtgtcatctacagtatccgtgaaagcataaagttcataaaagcttctcctagtcgcga 592 ||| || || |||| |||||||| || || |||||||||||||||||||| || || || Sbjct: 481 cggcgtgatttacaacatccgtgagagtatcaagttcataaaagcttctccaagccgtga 540 Query: 593 ggaaaagttcgctgagattgctctgcagctg 623 ||| ||||| |||||||||||| |||||||| Sbjct: 541 ggagaagtttgctgagattgctgtgcagctg 571
>dbj|AK067574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013110B04, full insert sequence Length = 1727 Score = 456 bits (230), Expect = e-125 Identities = 372/418 (88%), Gaps = 1/418 (0%) Strand = Plus / Plus Query: 205 ttggctatgtttcagtttctgggcagttcattgactctgaatggaaattacatcgaagaa 264 |||||||||||||| ||||||||||||| ||||||||||| ||||| |||||||||||| Sbjct: 1 ttggctatgtttcactttctgggcagtttattgactctgagtggaagatacatcgaagaa 60 Query: 265 tgcttagcttcatgatggtgtcttcgcctcattcggagaatgcacttagtgaagctatta 324 |||| | |||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 61 tgctaaacttcatgatggtgtcttctcctcattcagagaatgcacttagtgaagctatta 120 Query: 325 gctcaagccttactgactggagtatgaaggagaagctatttaccatcacgttggataatg 384 | |||||||| | ||||||| ||||||||| || || || |||||||| ||||| |||| Sbjct: 121 gtgcaagcctttcggactggaatatgaaggacaaactgttcaccatcacattggacaatg 180 Query: 385 attgctcatctcatgatatatacagtgcaaatcttagagattatctctccagtaagaata 444 |||||||||| ||||||||||||||||||||||| || ||||||||||||| ||||| | Sbjct: 181 attgctcatcacatgatatatacagtgcaaatctgagggattatctctccaacaagaaca 240 Query: 445 accacatgcttaagggccagctatttgttgtgaggtgctatgcccatatcctgaatgcag 504 ||| |||||| |||||||| || |||||||| ||||| |||||||||||||||||||||| Sbjct: 241 acctcatgctcaagggccaactgtttgttgtaaggtgttatgcccatatcctgaatgcag 300 Query: 505 ttgcagaagatgtcattgctttaatccacggtgtcatctacagtatccgtgaaagcataa 564 |||| | |||| |||||||| |||||| ||||||||||||| ||||||||||||||| | Sbjct: 301 ttgctcaggatg-cattgcttcaatccatggtgtcatctacaatatccgtgaaagcatca 359 Query: 565 agttcataaaagcttctcctagtcgcgaggaaaagttcgctgagattgctctgcagct 622 ||||||||||||||||||||| || ||||| ||||| || ||||||||||||||||| Sbjct: 360 agttcataaaagcttctcctacccgtgaggagaagtttgcagagattgctctgcagct 417
>ref|XM_475956.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2259 Score = 287 bits (145), Expect = 2e-74 Identities = 483/595 (81%), Gaps = 3/595 (0%) Strand = Plus / Plus Query: 29 cttcactgcttttattgatagtctgcagcctcgtttcagggttgctgatgttgatgcaat 88 ||||||||| ||||||| ||| ||||||||||||||||||| ||||||||| |||| Sbjct: 690 cttcactgcatttattgggagtttgcagcctcgtttcagggtgatagatgttgatacaat 749 Query: 89 ggaggtggaggtgtatgctgtttatcagaaagaaaaagagaaccttttgcaagcattcag 148 || | ||||| || |||||||||||||||||| || ||||| |||| | ||||| Sbjct: 750 tgaaggacaggtgcattctgtttatcagaaagaaagggaaaacctgatgcatgtgttcag 809 Query: 149 caccatgcctggaaggatcagcctcactattggattgtggacaactagtcaaactcttgg 208 ||| |||||||||| |||||||||||| | |||||||| |||||||||| |||||||| Sbjct: 810 cactgtgcctggaagaatcagcctcactgtaagattgtgggcaactagtcagactcttgg 869 Query: 209 ctatgtttcagtttctgggcagttcattgactctgaatggaaattacatcgaagaatgct 268 ||| ||||| || | | || || |||||| ||||||||| | | |||||||||||| | Sbjct: 870 atatatttcacttgcagcacaatttattgacactgaatggagagtgcatcgaagaatggt 929 Query: 269 tagcttcatgatggtgtcttcgcctcattcggagaatgcacttagtgaagctattagctc 328 || |||||||||||| |||||||||||||| |||||| |||||||||||||||| || | Sbjct: 930 taacttcatgatggtctcttcgcctcattcagagaattcacttagtgaagctatcagtac 989 Query: 329 aagccttactgactggagtatgaaggagaagctatttaccatcacgttggataatgattg 388 |||||| | ||||||| |||||||| |||||||| |||||||| |||||||||||| Sbjct: 990 aagcctctcagactggaacatgaaggacaagctattcaccatcacattggataatgatcc 1049 Query: 389 ctcatctcatgatatatacagtgcaaatcttagagattatctctccagtaaga---ataa 445 ||| || |||||||| ||||||||||| | | | | |||||||||| |||| | || Sbjct: 1050 ctcgtcacatgatatctacagtgcaaacatgataaactatctctccaacaagaaggacaa 1109 Query: 446 ccacatgcttaagggccagctatttgttgtgaggtgctatgcccatatcctgaatgcagt 505 | |||| | ||||||||| | ||||||||||| || ||||| ||||| ||||| |||| Sbjct: 1110 catcatgatcaagggccagttgtttgttgtgagatgttatgcacatatactgaacacagt 1169 Query: 506 tgcagaagatgtcattgctttaatccacggtgtcatctacagtatccgtgaaagcataaa 565 ||| ||||||||||||||| | || |||| ||||| |||||||||||| ||||| Sbjct: 1170 cgcacaagatgtcattgcttctgttcatagtgtgatctatcatatccgtgaaagtataaa 1229 Query: 566 gttcataaaagcttctcctagtcgcgaggaaaagttcgctgagattgctctgcag 620 |||||||||||||||| || | |||||| ||||| || || |||||||||||| Sbjct: 1230 gttcataaaagcttcttctgtccacgaggataagtttgcggaaattgctctgcag 1284
>dbj|AK102230.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033088A04, full insert sequence Length = 2844 Score = 280 bits (141), Expect = 5e-72 Identities = 482/595 (81%), Gaps = 3/595 (0%) Strand = Plus / Plus Query: 29 cttcactgcttttattgatagtctgcagcctcgtttcagggttgctgatgttgatgcaat 88 ||||||||| ||||||| ||| ||||||||||||||||||| ||||||||| |||| Sbjct: 1039 cttcactgcatttattgggagtttgcagcctcgtttcagggtgatagatgttgatacaat 1098 Query: 89 ggaggtggaggtgtatgctgtttatcagaaagaaaaagagaaccttttgcaagcattcag 148 || | ||||| || |||||||||||||||||| || ||||| |||| | ||||| Sbjct: 1099 tgaaggacaggtgcattctgtttatcagaaagaaagggaaaacctgatgcatgtgttcag 1158 Query: 149 caccatgcctggaaggatcagcctcactattggattgtggacaactagtcaaactcttgg 208 ||| |||||||||| |||||||||||| | |||||||| | |||||||| |||||||| Sbjct: 1159 cactgtgcctggaagaatcagcctcactgtaagattgtgggcgactagtcagactcttgg 1218 Query: 209 ctatgtttcagtttctgggcagttcattgactctgaatggaaattacatcgaagaatgct 268 ||| ||||| || | | || || |||||| ||||||||| | | |||||||||||| | Sbjct: 1219 atatatttcacttgcagcacaatttattgacactgaatggagagtgcatcgaagaatggt 1278 Query: 269 tagcttcatgatggtgtcttcgcctcattcggagaatgcacttagtgaagctattagctc 328 || |||||||||||| |||||||||||||| |||||| |||||||||||||||| || | Sbjct: 1279 taacttcatgatggtctcttcgcctcattcagagaattcacttagtgaagctatcagtac 1338 Query: 329 aagccttactgactggagtatgaaggagaagctatttaccatcacgttggataatgattg 388 |||||| | ||||||| |||||||| |||||||| |||||||| |||||||||||| Sbjct: 1339 aagcctctcagactggaacatgaaggacaagctattcaccatcacattggataatgatcc 1398 Query: 389 ctcatctcatgatatatacagtgcaaatcttagagattatctctccagtaaga---ataa 445 ||| || |||||||| ||||||||||| | | | | |||||||||| |||| | || Sbjct: 1399 ctcgtcacatgatatctacagtgcaaacatgataaactatctctccaacaagaaggacaa 1458 Query: 446 ccacatgcttaagggccagctatttgttgtgaggtgctatgcccatatcctgaatgcagt 505 | |||| | ||||||||| | ||||||||||| || ||||| ||||| ||||| |||| Sbjct: 1459 catcatgatcaagggccagttgtttgttgtgagatgttatgcacatatactgaacacagt 1518 Query: 506 tgcagaagatgtcattgctttaatccacggtgtcatctacagtatccgtgaaagcataaa 565 ||| ||||||||||||||| | || |||| ||||| |||||||||||| ||||| Sbjct: 1519 cgcacaagatgtcattgcttctgttcatagtgtgatctatcatatccgtgaaagtataaa 1578 Query: 566 gttcataaaagcttctcctagtcgcgaggaaaagttcgctgagattgctctgcag 620 |||||||||||||||| || | |||||| ||||| || || |||||||||||| Sbjct: 1579 gttcataaaagcttcttctgtccacgaggataagtttgcggaaattgctctgcag 1633
>gb|DQ115067.1| Saccharum officinarum clone SCRUAD1133F08 Length = 1435 Score = 135 bits (68), Expect = 2e-28 Identities = 134/156 (85%) Strand = Plus / Plus Query: 468 tttgttgtgaggtgctatgcccatatcctgaatgcagttgcagaagatgtcattgcttta 527 |||||||||||||||||||| ||||||||||||| |||||| | ||||| ||||||| Sbjct: 2 tttgttgtgaggtgctatgctcatatcctgaatgtagttgctcaggatgtaattgcttcg 61 Query: 528 atccacggtgtcatctacagtatccgtgaaagcataaagttcataaaagcttctcctagt 587 || ||||| || || |||| ||||||||||| || |||||||||||||||||||| || Sbjct: 62 attcacggcgtgatttacaacatccgtgaaagtatcaagttcataaaagcttctccaagc 121 Query: 588 cgcgaggaaaagttcgctgagattgctctgcagctg 623 || ||||| ||||| |||||||||||| |||||||| Sbjct: 122 cgtgaggagaagtttgctgagattgctgtgcagctg 157
>ref|XM_463295.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2055 Score = 65.9 bits (33), Expect = 1e-07 Identities = 105/129 (81%) Strand = Plus / Plus Query: 449 catgcttaagggccagctatttgttgtgaggtgctatgcccatatcctgaatgcagttgc 508 |||||| ||||||||| |||| |||||||||||||||| | || || ||||||||||| Sbjct: 891 catgctgaagggccagacctttgctgtgaggtgctatgccaacattctaaatgcagttgc 950 Query: 509 agaagatgtcattgctttaatccacggtgtcatctacagtatccgtgaaagcataaagtt 568 | | | |||| |||||| | | ||| ||||||||| |||||||| || |||||||| Sbjct: 951 acatggtgtccttgcttcagttcacaacgtcatctacctcatccgtgagagtataaagtt 1010 Query: 569 cataaaagc 577 ||||||||| Sbjct: 1011 cataaaagc 1019 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 156 cctggaaggatcagcctcact 176 ||||||||||||||||||||| Sbjct: 598 cctggaaggatcagcctcact 618
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 65.9 bits (33), Expect = 1e-07 Identities = 105/129 (81%) Strand = Plus / Plus Query: 449 catgcttaagggccagctatttgttgtgaggtgctatgcccatatcctgaatgcagttgc 508 |||||| ||||||||| |||| |||||||||||||||| | || || ||||||||||| Sbjct: 18388952 catgctgaagggccagacctttgctgtgaggtgctatgccaacattctaaatgcagttgc 18389011 Query: 509 agaagatgtcattgctttaatccacggtgtcatctacagtatccgtgaaagcataaagtt 568 | | | |||| |||||| | | ||| ||||||||| |||||||| || |||||||| Sbjct: 18389012 acatggtgtccttgcttcagttcacaacgtcatctacctcatccgtgagagtataaagtt 18389071 Query: 569 cataaaagc 577 ||||||||| Sbjct: 18389072 cataaaagc 18389080 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 156 cctggaaggatcagcctcact 176 ||||||||||||||||||||| Sbjct: 18388659 cctggaaggatcagcctcact 18388679
>dbj|AP004222.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1003B09 Length = 155263 Score = 65.9 bits (33), Expect = 1e-07 Identities = 105/129 (81%) Strand = Plus / Plus Query: 449 catgcttaagggccagctatttgttgtgaggtgctatgcccatatcctgaatgcagttgc 508 |||||| ||||||||| |||| |||||||||||||||| | || || ||||||||||| Sbjct: 12710 catgctgaagggccagacctttgctgtgaggtgctatgccaacattctaaatgcagttgc 12769 Query: 509 agaagatgtcattgctttaatccacggtgtcatctacagtatccgtgaaagcataaagtt 568 | | | |||| |||||| | | ||| ||||||||| |||||||| || |||||||| Sbjct: 12770 acatggtgtccttgcttcagttcacaacgtcatctacctcatccgtgagagtataaagtt 12829 Query: 569 cataaaagc 577 ||||||||| Sbjct: 12830 cataaaagc 12838 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 156 cctggaaggatcagcctcact 176 ||||||||||||||||||||| Sbjct: 12417 cctggaaggatcagcctcact 12437
>dbj|AK069603.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023024D15, full insert sequence Length = 2390 Score = 65.9 bits (33), Expect = 1e-07 Identities = 105/129 (81%) Strand = Plus / Plus Query: 449 catgcttaagggccagctatttgttgtgaggtgctatgcccatatcctgaatgcagttgc 508 |||||| ||||||||| |||| |||||||||||||||| | || || ||||||||||| Sbjct: 1102 catgctgaagggccagacctttgctgtgaggtgctatgccaacattctaaatgcagttgc 1161 Query: 509 agaagatgtcattgctttaatccacggtgtcatctacagtatccgtgaaagcataaagtt 568 | | | |||| |||||| | | ||| ||||||||| |||||||| || |||||||| Sbjct: 1162 acatggtgtccttgcttcagttcacaacgtcatctacctcatccgtgagagtataaagtt 1221 Query: 569 cataaaagc 577 ||||||||| Sbjct: 1222 cataaaagc 1230 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 156 cctggaaggatcagcctcact 176 ||||||||||||||||||||| Sbjct: 809 cctggaaggatcagcctcact 829
>gb|AY108496.1| Zea mays PCO137385 mRNA sequence Length = 869 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Minus Query: 557 aagcataaagttcataaaagcttc 580 |||||||||||||||||||||||| Sbjct: 35 aagcataaagttcataaaagcttc 12
>gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequence Length = 2906179 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 69 gttgctgatgttgatgcaatgga 91 ||||||||||||||||||||||| Sbjct: 991997 gttgctgatgttgatgcaatgga 991975
>emb|AL158210.12| Human DNA sequence from clone RP11-554I8 on chromosome 10 Contains two novel genes, complete sequence Length = 134826 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 144 ttcagcaccatgcctggaagga 165 |||||||||||||||||||||| Sbjct: 54088 ttcagcaccatgcctggaagga 54067
>gb|AC102381.12| Mus musculus chromosome 8, clone RP24-180I19, complete sequence Length = 190298 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 136 tgcaagcattcagcaccatgcctgg 160 |||||||||||| |||||||||||| Sbjct: 82946 tgcaagcattcaccaccatgcctgg 82970
>gb|AC121588.2| Mus musculus chromosome 3 clone RP23-275K22, complete sequence Length = 189679 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 211 atgtttcagtttctgggcagttcat 235 ||||||||||||||||| ||||||| Sbjct: 36722 atgtttcagtttctgggaagttcat 36746
>gb|AC161528.14| Mus musculus chromosome 8, clone RP23-369H18, complete sequence Length = 206302 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 136 tgcaagcattcagcaccatgcctgg 160 |||||||||||| |||||||||||| Sbjct: 202292 tgcaagcattcaccaccatgcctgg 202268
>gb|AC109244.11| Mus musculus chromosome 15, clone RP23-459E13, complete sequence Length = 183400 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 28 ccttcactgcttttattgatagtct 52 ||||||||||||||||||| ||||| Sbjct: 152829 ccttcactgcttttattgagagtct 152853
>gb|AC025794.9| Mus musculus chromosome 19, clone RP23-62O7, complete sequence Length = 242418 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 473 tgtgaggtgctatgcccatatcctg 497 |||||||||||| |||||||||||| Sbjct: 43965 tgtgaggtgctaagcccatatcctg 43941
>gb|AC125136.4| Mus musculus BAC clone RP24-323L3 from chromosome 19, complete sequence Length = 150261 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 473 tgtgaggtgctatgcccatatcctg 497 |||||||||||| |||||||||||| Sbjct: 122612 tgtgaggtgctaagcccatatcctg 122588
>gb|AC165160.3| Mus musculus BAC clone RP23-200E23 from chromosome 3, complete sequence Length = 183763 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 211 atgtttcagtttctgggcagttcat 235 ||||||||||||||||| ||||||| Sbjct: 123323 atgtttcagtttctgggaagttcat 123347
>gb|AC146891.3| Dasypus novemcinctus clone VMRC5-364E4, complete sequence Length = 133673 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 aagcattcagcaccatgcct 158 |||||||||||||||||||| Sbjct: 76224 aagcattcagcaccatgcct 76205
>gb|AC162448.10| Mus musculus chromosome 1, clone RP24-405F23, complete sequence Length = 180366 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 136 tgcaagcattcagcaccatgcctg 159 ||||||| |||||||||||||||| Sbjct: 40581 tgcaagctttcagcaccatgcctg 40558
>gb|AC149790.1| Pan troglodytes chromosome X clone PTB-089K20, complete sequence Length = 47909 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 gcattcagcaccatgcctgg 160 |||||||||||||||||||| Sbjct: 27778 gcattcagcaccatgcctgg 27797
>gb|AC145959.3| Gallus gallus chromosome UNK clone CH261-17M10, complete sequence Length = 183075 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 tatcagaaagaaaaagagaa 130 |||||||||||||||||||| Sbjct: 49135 tatcagaaagaaaaagagaa 49154
>gb|AC127377.4| Mus musculus BAC clone RP23-51N3 from chromosome 3, complete sequence Length = 195767 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 117 aaagaaaaagagaaccttttgcaa 140 ||||||||||||||| |||||||| Sbjct: 51969 aaagaaaaagagaacattttgcaa 51992
>gb|AC122692.4| Homo sapiens X BAC RP13-675A2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 102257 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 tgggcagttcattgactctg 243 |||||||||||||||||||| Sbjct: 9037 tgggcagttcattgactctg 9018
>gb|AC102604.13| Mus musculus chromosome 19, clone RP23-385L22, complete sequence Length = 212387 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 486 gcccatatcctgaatgcagt 505 |||||||||||||||||||| Sbjct: 79717 gcccatatcctgaatgcagt 79698
>emb|AL355522.11| Human DNA sequence from clone RP11-546O15 on chromosome 6 Contains the 3' end of the CLIC5 gene for chloride intracellular channel 5, complete sequence Length = 182982 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 137 gcaagcattcagcaccatgcctgg 160 ||||||| |||||||||||||||| Sbjct: 11499 gcaagcactcagcaccatgcctgg 11476
>emb|AL024509.1|HS522P13 Human DNA sequence from clone RP3-522P13 on chromosome 6p21.31-22.3 Contains a 60S Ribosomal Protein L21 pseudogene, a heterogeneous nuclear ribonucleoprotein A3 (HNRPA3) (FBRNP, D10S102) pseudogene, two novel genes and a CpG island, complete sequence Length = 150024 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 ccagccttcactgcttttat 43 |||||||||||||||||||| Sbjct: 85957 ccagccttcactgcttttat 85976
>emb|AL022162.1|HS454M7 Human DNA sequence from clone RP3-454M7 on chromosome Xq25-26.3 Contains the 3' end of the OCRL gene for oculocerebrorenal syndrome of Lowe, the gene for apelin (APLN) and a CpG island, complete sequence Length = 151152 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 gcattcagcaccatgcctgg 160 |||||||||||||||||||| Sbjct: 58975 gcattcagcaccatgcctgg 58994
>gb|AC157362.7| Mus musculus chromosome 1, clone RP23-382H8, complete sequence Length = 212565 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 136 tgcaagcattcagcaccatgcctg 159 ||||||| |||||||||||||||| Sbjct: 180315 tgcaagctttcagcaccatgcctg 180292
>emb|AL596183.11| Mouse DNA sequence from clone RP23-286B12 on chromosome 11, complete sequence Length = 167058 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 aagcattcagcaccatgcct 158 |||||||||||||||||||| Sbjct: 39513 aagcattcagcaccatgcct 39494
>emb|BX001068.7| Mouse DNA sequence from clone RP23-54E4 on chromosome 13 Contains the gene for a novel SCAN domain containing C2H2 type zinc finger protein, two novel genes (933017L02Rik, 492150E05Rik), the Skz1 gene for SCAN-KRAB-zinc finger gene 1, a ribosomal protein L29 (Rpl29) pseudogene, the Zfp96 gene for Zinc finger protein 96, the gene for olfactory receptor MOR256-16, the gene for a novel protein similar to plasma glutathione peroxidase Gpx3, the (pseudo)gene for a novel protein similar to ribosomal protein L29 (Rpl29) and the Gpx5 gene for glutathione peroxidase 5 (epididymal androgen-related protein), complete sequence Length = 175880 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 138 caagcattcagcaccatgcctgga 161 ||||||| |||||||||||||||| Sbjct: 20431 caagcatgcagcaccatgcctgga 20454
>emb|AL589679.14| Mouse DNA sequence from clone RP23-189A16 on chromosome 13 Contains the 3' end of the Csh1 gene for chorionic somatomammotropin hormone 1, two genes for novel proteins similar to chorionic somatomammotropin hormone 1 (Csh1), the Prlpi gene for prolactin-like protein I (Prlpj, decidualin), the Csh2 gene for chorionic somatomammotropin hormone 2, the gene for protein 1600016E11RIK similar to prolactin and a novel gene (4930511O05Rik), complete sequence Length = 207737 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 107 tgtttatcagaaagaaaaagagaa 130 |||||||||||| ||||||||||| Sbjct: 41190 tgtttatcagaatgaaaaagagaa 41213
>gb|AC152174.15| Gasterosteus aculeatus clone ch213-202d23, complete sequence Length = 174464 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 ctgactggagtatgaaggag 356 |||||||||||||||||||| Sbjct: 9979 ctgactggagtatgaaggag 9998
>gb|AF195953.2| Homo sapiens membrane-bound aminopeptidase P (XNPEP2) gene, complete cds Length = 206618 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 gcattcagcaccatgcctgg 160 |||||||||||||||||||| Sbjct: 20775 gcattcagcaccatgcctgg 20794
>gb|AC098863.3| Homo sapiens BAC clone RP11-347I16 from 4, complete sequence Length = 89261 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 cttttgcaagcattcagcac 151 |||||||||||||||||||| Sbjct: 34783 cttttgcaagcattcagcac 34764
>gb|AC016670.7| Homo sapiens BAC clone RP11-11K6 from 2, complete sequence Length = 148415 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 439 agaataaccacatgcttaag 458 |||||||||||||||||||| Sbjct: 13016 agaataaccacatgcttaag 13035
>gb|AC159193.2| Mus musculus BAC clone RP24-68E20 from chromosome 12, complete sequence Length = 243976 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 gcattcagcaccatgcctgg 160 |||||||||||||||||||| Sbjct: 225232 gcattcagcaccatgcctgg 225251
>emb|AL928584.23| Mouse DNA sequence from clone RP23-251I16 on chromosome 4, complete sequence Length = 118310 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 tgcaagcattcagcaccatgcctg 159 ||||||| |||||||||||||||| Sbjct: 76300 tgcaagctttcagcaccatgcctg 76323
>gb|AC154661.2| Mus musculus BAC clone RP24-274N1 from 12, complete sequence Length = 159667 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 557 aagcataaagttcataaaag 576 |||||||||||||||||||| Sbjct: 140965 aagcataaagttcataaaag 140984
>gb|AC155922.1| Mus musculus BAC clone RP24-501E5 from 12, complete sequence Length = 169610 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 557 aagcataaagttcataaaag 576 |||||||||||||||||||| Sbjct: 150305 aagcataaagttcataaaag 150286
>emb|Z46996.1|CEC34C12 Caenorhabditis elegans Cosmid C34C12, complete sequence Length = 34759 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 aagaaaaagagaaccttttg 137 |||||||||||||||||||| Sbjct: 18361 aagaaaaagagaaccttttg 18380
>gb|AC007591.2|F9L1 Arabidopsis thaliana chromosome 1 BAC F9L1 sequence, complete sequence Length = 141984 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 114 cagaaagaaaaagagaaccttttg 137 ||||| |||||||||||||||||| Sbjct: 15454 cagaaggaaaaagagaaccttttg 15431
>emb|Z49286.1|SCYJL011C S.cerevisiae chromosome X reading frame ORF YJL011c Length = 4162 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 cttttattgatagtctgcag 56 |||||||||||||||||||| Sbjct: 1812 cttttattgatagtctgcag 1793
>emb|Z49285.1|SCYJL010C S.cerevisiae chromosome X reading frame ORF YJL010c Length = 5084 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 cttttattgatagtctgcag 56 |||||||||||||||||||| Sbjct: 441 cttttattgatagtctgcag 422
>gb|AC110170.6| Mus musculus chromosome 12, clone RP23-301G24, complete sequence Length = 173081 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 cttcactgcttttattgata 48 |||||||||||||||||||| Sbjct: 140679 cttcactgcttttattgata 140698
>gb|AE000666.1| Methanothermobacter thermautotrophicus str. Delta H, complete genome Length = 1751377 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 gttgctgatgttgatgcaat 88 |||||||||||||||||||| Sbjct: 1313009 gttgctgatgttgatgcaat 1313028
>emb|CT010476.10| Mouse DNA sequence from clone RP23-339L19 on chromosome 12, complete sequence Length = 235489 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 cttcactgcttttattgata 48 |||||||||||||||||||| Sbjct: 34522 cttcactgcttttattgata 34541
>gb|AC134246.4| Mus musculus BAC clone RP23-199B2 from 3, complete sequence Length = 206439 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 117 aaagaaaaagagaaccttttgcaa 140 ||||||||||||||| |||||||| Sbjct: 179737 aaagaaaaagagaacattttgcaa 179760
>gb|AC124516.4| Mus musculus BAC clone RP23-387C9 from 12, complete sequence Length = 236774 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 gcattcagcaccatgcctgg 160 |||||||||||||||||||| Sbjct: 787 gcattcagcaccatgcctgg 806 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,873,474 Number of Sequences: 3902068 Number of extensions: 6873474 Number of successful extensions: 137493 Number of sequences better than 10.0: 60 Number of HSP's better than 10.0 without gapping: 61 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 137057 Number of HSP's gapped (non-prelim): 415 length of query: 623 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 600 effective length of database: 17,143,297,704 effective search space: 10285978622400 effective search space used: 10285978622400 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
