ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags1o06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY857762.1| Triticum monococcum peroxidase 8 (POX8) mRNA, complete cds Length = 1282 Score = 507 bits (256), Expect = e-140 Identities = 361/390 (92%), Gaps = 7/390 (1%) Strand = Plus / Plus Query: 1 ccggtggtgctggnacaacaactactacaagnctggtgcagctcaacctgggcctgcact 60 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 818 ccggtggtgctgg-acaacaactactacaag-ctggtgcagctcaacctgggcctgcact 875 Query: 61 tctccgacgaccagctcatccgcaacgccaccctcaag-ccttcgtcgacgccttcgccg 119 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 876 tctccgacgaccagctcatccgcaacgccaccctcaaggccttcgtcgacgccttcgccg 935 Query: 120 ccaacgagnacgctgtggaaggacaagttcatcgccgccatgatcaagatgggcaacatc 179 |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 936 ccaacgag-acgctgtggaaggacaagttcctcgccgccatgatcaagatgggcaacatc 994 Query: 180 gcgcccaagaccggcacgcagggccagatccgcctcaactgcagcctcgtcaacccgtcc 239 |||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 995 agccccaagaccggcacgcagggggagatccgcctcaactgcagcctcgtcaacccggcc 1054 Query: 240 tcctcctcttcgtccgcttcttacgctggggcgatcgagatgctccgccgcccgggctcg 299 ||||| |||||||||| | |||||||||| |||||||||||||||||| |||||||| Sbjct: 1055 tcctcttcttcgtccg---cctacgctggggtgatcgagatgctccgccgaccgggctcc 1111 Query: 300 cacgacaaggtcgccatggcctgatgtgtgcgtgcttgaatgccaatgcacgggcgtgct 359 |||| |||||||||| || ||||||| ||||| ||||||||| |||||||||||||||| Sbjct: 1112 gacgataaggtcgccaagggctgatgtatgcgtccttgaatgcgaatgcacgggcgtgct 1171 Query: 360 ggctagtcggtgtccgttcgcgcctatact 389 |||| |||||||||||||||| | |||||| Sbjct: 1172 ggctggtcggtgtccgttcgcacgtatact 1201
>ref|NM_183816.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1062 Score = 212 bits (107), Expect = 9e-52 Identities = 155/167 (92%), Gaps = 3/167 (1%) Strand = Plus / Plus Query: 15 acaacaactactacaagnctggtgcagctcaacctgggcctgcacttctccgacgaccag 74 ||||||||||||||||| ||| ||| ||||||||||||||| |||||||||||||||||| Sbjct: 758 acaacaactactacaag-ctgctgccgctcaacctgggcctccacttctccgacgaccag 816 Query: 75 ctcatccgcaacgccaccct-caagccttcgtcgacgccttcgccgccaacgagnacgct 133 ||||||||||||||||| || | ||||||||||||||||||||||||||||| ||||| Sbjct: 817 ctcatccgcaacgccacgctcctccccttcgtcgacgccttcgccgccaacgag-acgct 875 Query: 134 gtggaaggacaagttcatcgccgccatgatcaagatgggcaacatcg 180 ||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 876 gtggaaggagaagttcgtcgccgccatgatcaagatgggcaacatcg 922 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 205 agatccgcctcaactgcagcctcgtcaacccgtcctc 241 ||||||| |||||||||||| ||||||||||||||| Sbjct: 947 agatccggctcaactgcagcgccgtcaacccgtcctc 983
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 212 bits (107), Expect = 9e-52 Identities = 155/167 (92%), Gaps = 3/167 (1%) Strand = Plus / Plus Query: 15 acaacaactactacaagnctggtgcagctcaacctgggcctgcacttctccgacgaccag 74 ||||||||||||||||| ||| ||| ||||||||||||||| |||||||||||||||||| Sbjct: 12552252 acaacaactactacaag-ctgctgccgctcaacctgggcctccacttctccgacgaccag 12552310 Query: 75 ctcatccgcaacgccaccct-caagccttcgtcgacgccttcgccgccaacgagnacgct 133 ||||||||||||||||| || | ||||||||||||||||||||||||||||| ||||| Sbjct: 12552311 ctcatccgcaacgccacgctcctccccttcgtcgacgccttcgccgccaacgag-acgct 12552369 Query: 134 gtggaaggacaagttcatcgccgccatgatcaagatgggcaacatcg 180 ||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 12552370 gtggaaggagaagttcgtcgccgccatgatcaagatgggcaacatcg 12552416 Score = 65.9 bits (33), Expect = 1e-07 Identities = 55/61 (90%), Gaps = 1/61 (1%) Strand = Plus / Plus Query: 112 cttcgccgccaacgagnacgctgtggaaggacaagttcatcgccgccatgatcaagatgg 171 |||||| || |||||| |||||||||||||| |||||| ||||||||||| ||||||||| Sbjct: 12539679 cttcgcggcgaacgag-acgctgtggaaggagaagttcgtcgccgccatggtcaagatgg 12539737 Query: 172 g 172 | Sbjct: 12539738 g 12539738 Score = 52.0 bits (26), Expect = 0.002 Identities = 54/62 (87%), Gaps = 1/62 (1%) Strand = Plus / Plus Query: 15 acaacaactactacaagnctggtgcagctcaacctgggcctgcacttctccgacgaccag 74 ||||||||||||||||| ||| ||| |||||||||||| || |||||||||| ||||| Sbjct: 12539582 acaacaactactacaag-ctgctgccgctcaacctggggctcttcttctccgacaaccag 12539640 Query: 75 ct 76 || Sbjct: 12539641 ct 12539642 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 205 agatccgcctcaactgcagcctcgtcaacccgtcctc 241 ||||||| |||||||||||| ||||||||||||||| Sbjct: 12552441 agatccggctcaactgcagcgccgtcaacccgtcctc 12552477 Score = 44.1 bits (22), Expect = 0.49 Identities = 53/62 (85%), Gaps = 1/62 (1%) Strand = Plus / Plus Query: 15 acaacaactactacaagnctggtgcagctcaacctgggcctgcacttctccgacgaccag 74 ||||||||||||||||| ||| ||| |||| ||||||| || |||||||||| ||||| Sbjct: 12501515 acaacaactactacaag-ctgctgccgctcgacctggggctcttcttctccgacaaccag 12501573 Query: 75 ct 76 || Sbjct: 12501574 ct 12501575 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 152 cgccgccatgatcaagatgggcaac 176 |||||||||| |||||||||||||| Sbjct: 10679635 cgccgccatggtcaagatgggcaac 10679611 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 157 ccatgatcaagatgggcaacatcgcgcc 184 ||||| ||||||||||||||||| |||| Sbjct: 20062176 ccatggtcaagatgggcaacatctcgcc 20062203
>dbj|AP002971.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0537A05 Length = 152396 Score = 212 bits (107), Expect = 9e-52 Identities = 155/167 (92%), Gaps = 3/167 (1%) Strand = Plus / Plus Query: 15 acaacaactactacaagnctggtgcagctcaacctgggcctgcacttctccgacgaccag 74 ||||||||||||||||| ||| ||| ||||||||||||||| |||||||||||||||||| Sbjct: 63862 acaacaactactacaag-ctgctgccgctcaacctgggcctccacttctccgacgaccag 63920 Query: 75 ctcatccgcaacgccaccct-caagccttcgtcgacgccttcgccgccaacgagnacgct 133 ||||||||||||||||| || | ||||||||||||||||||||||||||||| ||||| Sbjct: 63921 ctcatccgcaacgccacgctcctccccttcgtcgacgccttcgccgccaacgag-acgct 63979 Query: 134 gtggaaggacaagttcatcgccgccatgatcaagatgggcaacatcg 180 ||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 63980 gtggaaggagaagttcgtcgccgccatgatcaagatgggcaacatcg 64026 Score = 65.9 bits (33), Expect = 1e-07 Identities = 55/61 (90%), Gaps = 1/61 (1%) Strand = Plus / Plus Query: 112 cttcgccgccaacgagnacgctgtggaaggacaagttcatcgccgccatgatcaagatgg 171 |||||| || |||||| |||||||||||||| |||||| ||||||||||| ||||||||| Sbjct: 51289 cttcgcggcgaacgag-acgctgtggaaggagaagttcgtcgccgccatggtcaagatgg 51347 Query: 172 g 172 | Sbjct: 51348 g 51348 Score = 52.0 bits (26), Expect = 0.002 Identities = 54/62 (87%), Gaps = 1/62 (1%) Strand = Plus / Plus Query: 15 acaacaactactacaagnctggtgcagctcaacctgggcctgcacttctccgacgaccag 74 ||||||||||||||||| ||| ||| |||||||||||| || |||||||||| ||||| Sbjct: 51192 acaacaactactacaag-ctgctgccgctcaacctggggctcttcttctccgacaaccag 51250 Query: 75 ct 76 || Sbjct: 51251 ct 51252 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 205 agatccgcctcaactgcagcctcgtcaacccgtcctc 241 ||||||| |||||||||||| ||||||||||||||| Sbjct: 64051 agatccggctcaactgcagcgccgtcaacccgtcctc 64087 Score = 44.1 bits (22), Expect = 0.49 Identities = 53/62 (85%), Gaps = 1/62 (1%) Strand = Plus / Plus Query: 15 acaacaactactacaagnctggtgcagctcaacctgggcctgcacttctccgacgaccag 74 ||||||||||||||||| ||| ||| |||| ||||||| || |||||||||| ||||| Sbjct: 13125 acaacaactactacaag-ctgctgccgctcgacctggggctcttcttctccgacaaccag 13183 Query: 75 ct 76 || Sbjct: 13184 ct 13185
>dbj|AP004358.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1135C02 Length = 152306 Score = 212 bits (107), Expect = 9e-52 Identities = 155/167 (92%), Gaps = 3/167 (1%) Strand = Plus / Plus Query: 15 acaacaactactacaagnctggtgcagctcaacctgggcctgcacttctccgacgaccag 74 ||||||||||||||||| ||| ||| ||||||||||||||| |||||||||||||||||| Sbjct: 137867 acaacaactactacaag-ctgctgccgctcaacctgggcctccacttctccgacgaccag 137925 Query: 75 ctcatccgcaacgccaccct-caagccttcgtcgacgccttcgccgccaacgagnacgct 133 ||||||||||||||||| || | ||||||||||||||||||||||||||||| ||||| Sbjct: 137926 ctcatccgcaacgccacgctcctccccttcgtcgacgccttcgccgccaacgag-acgct 137984 Query: 134 gtggaaggacaagttcatcgccgccatgatcaagatgggcaacatcg 180 ||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 137985 gtggaaggagaagttcgtcgccgccatgatcaagatgggcaacatcg 138031 Score = 65.9 bits (33), Expect = 1e-07 Identities = 55/61 (90%), Gaps = 1/61 (1%) Strand = Plus / Plus Query: 112 cttcgccgccaacgagnacgctgtggaaggacaagttcatcgccgccatgatcaagatgg 171 |||||| || |||||| |||||||||||||| |||||| ||||||||||| ||||||||| Sbjct: 125294 cttcgcggcgaacgag-acgctgtggaaggagaagttcgtcgccgccatggtcaagatgg 125352 Query: 172 g 172 | Sbjct: 125353 g 125353 Score = 52.0 bits (26), Expect = 0.002 Identities = 54/62 (87%), Gaps = 1/62 (1%) Strand = Plus / Plus Query: 15 acaacaactactacaagnctggtgcagctcaacctgggcctgcacttctccgacgaccag 74 ||||||||||||||||| ||| ||| |||||||||||| || |||||||||| ||||| Sbjct: 125197 acaacaactactacaag-ctgctgccgctcaacctggggctcttcttctccgacaaccag 125255 Query: 75 ct 76 || Sbjct: 125256 ct 125257 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 205 agatccgcctcaactgcagcctcgtcaacccgtcctc 241 ||||||| |||||||||||| ||||||||||||||| Sbjct: 138056 agatccggctcaactgcagcgccgtcaacccgtcctc 138092 Score = 44.1 bits (22), Expect = 0.49 Identities = 53/62 (85%), Gaps = 1/62 (1%) Strand = Plus / Plus Query: 15 acaacaactactacaagnctggtgcagctcaacctgggcctgcacttctccgacgaccag 74 ||||||||||||||||| ||| ||| |||| ||||||| || |||||||||| ||||| Sbjct: 87130 acaacaactactacaag-ctgctgccgctcgacctggggctcttcttctccgacaaccag 87188 Query: 75 ct 76 || Sbjct: 87189 ct 87190
>dbj|AK070715.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023058L02, full insert sequence Length = 1492 Score = 212 bits (107), Expect = 9e-52 Identities = 155/167 (92%), Gaps = 3/167 (1%) Strand = Plus / Plus Query: 15 acaacaactactacaagnctggtgcagctcaacctgggcctgcacttctccgacgaccag 74 ||||||||||||||||| ||| ||| ||||||||||||||| |||||||||||||||||| Sbjct: 833 acaacaactactacaag-ctgctgccgctcaacctgggcctccacttctccgacgaccag 891 Query: 75 ctcatccgcaacgccaccct-caagccttcgtcgacgccttcgccgccaacgagnacgct 133 ||||||||||||||||| || | ||||||||||||||||||||||||||||| ||||| Sbjct: 892 ctcatccgcaacgccacgctcctccccttcgtcgacgccttcgccgccaacgag-acgct 950 Query: 134 gtggaaggacaagttcatcgccgccatgatcaagatgggcaacatcg 180 ||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 951 gtggaaggagaagttcgtcgccgccatgatcaagatgggcaacatcg 997 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 205 agatccgcctcaactgcagcctcgtcaacccgtcctc 241 ||||||| |||||||||||| ||||||||||||||| Sbjct: 1022 agatccggctcaactgcagcgccgtcaacccgtcctc 1058
>dbj|AK059977.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-B01, full insert sequence Length = 1015 Score = 212 bits (107), Expect = 9e-52 Identities = 155/167 (92%), Gaps = 3/167 (1%) Strand = Plus / Plus Query: 15 acaacaactactacaagnctggtgcagctcaacctgggcctgcacttctccgacgaccag 74 ||||||||||||||||| ||| ||| ||||||||||||||| |||||||||||||||||| Sbjct: 522 acaacaactactacaag-ctgctgccgctcaacctgggcctccacttctccgacgaccag 580 Query: 75 ctcatccgcaacgccaccct-caagccttcgtcgacgccttcgccgccaacgagnacgct 133 ||||||||||||||||| || | ||||||||||||||||||||||||||||| ||||| Sbjct: 581 ctcatccgcaacgccacgctcctccccttcgtcgacgccttcgccgccaacgag-acgct 639 Query: 134 gtggaaggacaagttcatcgccgccatgatcaagatgggcaacatcg 180 ||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 640 gtggaaggagaagttcgtcgccgccatgatcaagatgggcaacatcg 686 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 205 agatccgcctcaactgcagcctcgtcaacccgtcctc 241 ||||||| |||||||||||| ||||||||||||||| Sbjct: 711 agatccggctcaactgcagcgccgtcaacccgtcctc 747
>tpe|BN000544.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx15 gene for class III peroxidase 15 precursor, exons 1-3 Length = 5322 Score = 212 bits (107), Expect = 9e-52 Identities = 155/167 (92%), Gaps = 3/167 (1%) Strand = Plus / Plus Query: 15 acaacaactactacaagnctggtgcagctcaacctgggcctgcacttctccgacgaccag 74 ||||||||||||||||| ||| ||| ||||||||||||||| |||||||||||||||||| Sbjct: 5018 acaacaactactacaag-ctgctgccgctcaacctgggcctccacttctccgacgaccag 5076 Query: 75 ctcatccgcaacgccaccct-caagccttcgtcgacgccttcgccgccaacgagnacgct 133 ||||||||||||||||| || | ||||||||||||||||||||||||||||| ||||| Sbjct: 5077 ctcatccgcaacgccacgctcctccccttcgtcgacgccttcgccgccaacgag-acgct 5135 Query: 134 gtggaaggacaagttcatcgccgccatgatcaagatgggcaacatcg 180 ||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 5136 gtggaaggagaagttcgtcgccgccatgatcaagatgggcaacatcg 5182 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 205 agatccgcctcaactgcagcctcgtcaacccgtcctc 241 ||||||| |||||||||||| ||||||||||||||| Sbjct: 5207 agatccggctcaactgcagcgccgtcaacccgtcctc 5243
>dbj|AK099187.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107P11, full insert sequence Length = 1271 Score = 210 bits (106), Expect = 4e-51 Identities = 154/166 (92%), Gaps = 3/166 (1%) Strand = Plus / Plus Query: 15 acaacaactactacaagnctggtgcagctcaacctgggcctgcacttctccgacgaccag 74 ||||||||||||||||| ||| ||| ||||||||||||||| |||||||||||||||||| Sbjct: 828 acaacaactactacaag-ctgctgccgctcaacctgggcctccacttctccgacgaccag 886 Query: 75 ctcatccgcaacgccaccct-caagccttcgtcgacgccttcgccgccaacgagnacgct 133 ||||||||||||||||| || | ||||||||||||||||||||||||||||| ||||| Sbjct: 887 ctcatccgcaacgccacgctcctccccttcgtcgacgccttcgccgccaacgag-acgct 945 Query: 134 gtggaaggacaagttcatcgccgccatgatcaagatgggcaacatc 179 ||||||||| |||||| ||||||||||||||||||||||||||||| Sbjct: 946 gtggaaggagaagttcgtcgccgccatgatcaagatgggcaacatc 991 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 205 agatccgcctcaactgcagcctcgtcaacccgtcctc 241 ||||||| |||||||||||| ||||||||||||||| Sbjct: 1017 agatccggctcaactgcagcgccgtcaacccgtcctc 1053
>gb|AY857755.1| Triticum monococcum peroxidase 1 (POX1) mRNA, complete cds Length = 1259 Score = 91.7 bits (46), Expect = 2e-15 Identities = 52/54 (96%) Strand = Plus / Plus Query: 156 gccatgatcaagatgggcaacatcgcgcccaagaccggcacgcagggccagatc 209 ||||||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct: 898 gccatgatcaagatgggcaacatcgcgcccaagacagggacgcagggccagatc 951
>emb|AJ276227.1|HVU276227 Hordeum vulgare partial mRNA for peroxidase (prx8 gene) Length = 930 Score = 91.7 bits (46), Expect = 2e-15 Identities = 52/54 (96%) Strand = Plus / Plus Query: 156 gccatgatcaagatgggcaacatcgcgcccaagaccggcacgcagggccagatc 209 ||||||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct: 831 gccatgatcaagatgggcaacatcgcgcccaagacggggacgcagggccagatc 884
>gb|AY857756.1| Triticum monococcum peroxidase 2 (POX2) mRNA, complete cds Length = 1250 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 154 ccgccatgatcaagatgggcaacatcgcgcccaagaccggcacgcagggccagatc 209 ||||||||||||||||||||||||||||||| ||||| || ||||||||||||||| Sbjct: 944 ccgccatgatcaagatgggcaacatcgcgccgaagacagggacgcagggccagatc 999
>emb|X56011.1|TAPERO Wheat mRNA for peroxidase Length = 1247 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 154 ccgccatgatcaagatgggcaacatcgcgcccaagaccggcacgcagggccagatc 209 ||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||| Sbjct: 939 ccgccatgatcaagatgggcaacatcgcgccgaagacaggcacgcaggggcagatc 994
>emb|X58396.1|HVPEROXI Barley mRNA for peroxidase (EC=1.11.1.7) Length = 1285 Score = 83.8 bits (42), Expect = 6e-13 Identities = 51/54 (94%) Strand = Plus / Plus Query: 156 gccatgatcaagatgggcaacatcgcgcccaagaccggcacgcagggccagatc 209 |||||||||||||||||||||||||| |||||||| || ||||||||||||||| Sbjct: 932 gccatgatcaagatgggcaacatcgcccccaagacagggacgcagggccagatc 985
>gb|L36093.1|BLYPRX Barley peroxidase mRNA, complete cds Length = 1262 Score = 83.8 bits (42), Expect = 6e-13 Identities = 51/54 (94%) Strand = Plus / Plus Query: 156 gccatgatcaagatgggcaacatcgcgcccaagaccggcacgcagggccagatc 209 |||||||||||||||||||||||||| |||||||| || ||||||||||||||| Sbjct: 932 gccatgatcaagatgggcaacatcgctcccaagacagggacgcagggccagatc 985
>ref|NM_183815.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1071 Score = 65.9 bits (33), Expect = 1e-07 Identities = 55/61 (90%), Gaps = 1/61 (1%) Strand = Plus / Plus Query: 112 cttcgccgccaacgagnacgctgtggaaggacaagttcatcgccgccatgatcaagatgg 171 |||||| || |||||| |||||||||||||| |||||| ||||||||||| ||||||||| Sbjct: 858 cttcgcggcgaacgag-acgctgtggaaggagaagttcgtcgccgccatggtcaagatgg 916 Query: 172 g 172 | Sbjct: 917 g 917 Score = 52.0 bits (26), Expect = 0.002 Identities = 54/62 (87%), Gaps = 1/62 (1%) Strand = Plus / Plus Query: 15 acaacaactactacaagnctggtgcagctcaacctgggcctgcacttctccgacgaccag 74 ||||||||||||||||| ||| ||| |||||||||||| || |||||||||| ||||| Sbjct: 761 acaacaactactacaag-ctgctgccgctcaacctggggctcttcttctccgacaaccag 819 Query: 75 ct 76 || Sbjct: 820 ct 821
>dbj|AK121616.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044C11, full insert sequence Length = 5938 Score = 65.9 bits (33), Expect = 1e-07 Identities = 55/61 (90%), Gaps = 1/61 (1%) Strand = Plus / Plus Query: 112 cttcgccgccaacgagnacgctgtggaaggacaagttcatcgccgccatgatcaagatgg 171 |||||| || |||||| |||||||||||||| |||||| ||||||||||| ||||||||| Sbjct: 5470 cttcgcggcgaacgag-acgctgtggaaggagaagttcgtcgccgccatggtcaagatgg 5528 Query: 172 g 172 | Sbjct: 5529 g 5529 Score = 52.0 bits (26), Expect = 0.002 Identities = 54/62 (87%), Gaps = 1/62 (1%) Strand = Plus / Plus Query: 15 acaacaactactacaagnctggtgcagctcaacctgggcctgcacttctccgacgaccag 74 ||||||||||||||||| ||| ||| |||||||||||| || |||||||||| ||||| Sbjct: 5373 acaacaactactacaag-ctgctgccgctcaacctggggctcttcttctccgacaaccag 5431 Query: 75 ct 76 || Sbjct: 5432 ct 5433
>tpe|BN000543.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx14 gene for class III peroxidase 14 precursor, exons 1-3 Length = 5620 Score = 65.9 bits (33), Expect = 1e-07 Identities = 55/61 (90%), Gaps = 1/61 (1%) Strand = Plus / Plus Query: 112 cttcgccgccaacgagnacgctgtggaaggacaagttcatcgccgccatgatcaagatgg 171 |||||| || |||||| |||||||||||||| |||||| ||||||||||| ||||||||| Sbjct: 5407 cttcgcggcgaacgag-acgctgtggaaggagaagttcgtcgccgccatggtcaagatgg 5465 Query: 172 g 172 | Sbjct: 5466 g 5466 Score = 52.0 bits (26), Expect = 0.002 Identities = 54/62 (87%), Gaps = 1/62 (1%) Strand = Plus / Plus Query: 15 acaacaactactacaagnctggtgcagctcaacctgggcctgcacttctccgacgaccag 74 ||||||||||||||||| ||| ||| |||||||||||| || |||||||||| ||||| Sbjct: 5310 acaacaactactacaag-ctgctgccgctcaacctggggctcttcttctccgacaaccag 5368 Query: 75 ct 76 || Sbjct: 5369 ct 5370
>gb|AF078872.1|AF078872 Avena sativa cultivar Ogle peroxidase PXC6 precursor (pxc6) gene, complete cds Length = 1197 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 154 ccgccatgatcaagatgggcaacatcgcgcccaagaccggcacgcagggccagatc 209 ||||||||||||||||||| |||||| |||| |||||| ||||||||||||||| Sbjct: 1109 ccgccatgatcaagatgggaaacatctcgccgctgaccgggacgcagggccagatc 1164
>gb|AF078871.1|AF078871 Avena sativa cultivar Ogle peroxidase PXC2 precursor (pxc2) gene, complete cds Length = 1191 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 154 ccgccatgatcaagatgggcaacatcgcgcccaagaccggcacgcagggccagatc 209 ||||||||||||||||||| |||||| |||| |||||| ||||||||||||||| Sbjct: 1103 ccgccatgatcaagatgggaaacatctcgccgctgaccgggacgcagggccagatc 1158
>gb|AY506493.1| Triticum aestivum PXB5-like gene, complete sequence Length = 1198 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 156 gccatgatcaagatgggcaacatcgcgcccaagaccggcacgcagggccagatc 209 ||||||||||||||||| ||||||||||| ||||| ||||||||||||||| Sbjct: 1113 gccatgatcaagatgggaaacatcgcgccgctcaccgggacgcagggccagatc 1166
>gb|AY506492.1| Triticum aestivum PXB4-like gene, complete sequence Length = 1196 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 156 gccatgatcaagatgggcaacatcgcgcccaagaccggcacgcagggccagatc 209 ||||||||||||||||| ||||||||||| ||||| ||||||||||||||| Sbjct: 1113 gccatgatcaagatgggaaacatcgcgccgctcaccgggacgcagggccagatc 1166
>gb|AY506485.1| Triticum aestivum PXCW3-like gene, complete sequence Length = 2466 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 156 gccatgatcaagatgggcaacatcgcgcccaagaccggcacgcagggccagatc 209 ||||||||||||||||| ||||||||||| ||||| ||||||||||||||| Sbjct: 1773 gccatgatcaagatgggaaacatcgcgccgctcaccgggacgcagggccagatc 1826
>gb|AY506484.1| Triticum aestivum PXCW2-like gene, complete sequence Length = 2456 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 156 gccatgatcaagatgggcaacatcgcgcccaagaccggcacgcagggccagatc 209 ||||||||||||||||| ||||||||||| ||||| ||||||||||||||| Sbjct: 1764 gccatgatcaagatgggaaacatcgcgccgctcaccgggacgcagggccagatc 1817
>gb|AY857757.1| Triticum monococcum peroxidase 3 (POX3) mRNA, complete cds Length = 1295 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 156 gccatgatcaagatgggcaacatcgcgcccaagaccggcacgcagggccagatc 209 ||||||||||||||||| ||||||||||| ||||| ||||||||||||||| Sbjct: 923 gccatgatcaagatgggaaacatcgcgccgctcaccgggacgcagggccagatc 976
>emb|X53675.1|TAPEROXIG Wheat (T. aesitvum) mRNA for peroxidase (EC 1.11.1.7) Length = 3240 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 156 gccatgatcaagatgggcaacatcgcgcccaagaccggcacgcagggccagatc 209 ||||||||||||||||| ||||||||||| ||||| ||||||||||||||| Sbjct: 2455 gccatgatcaagatgggaaacatcgcgccgctcaccgggacgcagggccagatc 2508
>emb|X85228.1|TAPOX2 T.aestivum pox2 gene Length = 1658 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 156 gccatgatcaagatgggcaacatcgcgcccaagaccggcacgcagggccagatc 209 ||||||||||||||||| ||||||||||| ||||| ||||||||||||||| Sbjct: 1323 gccatgatcaagatgggaaacatcgcgccgctcaccgggacgcagggccagatc 1376
>gb|AF387866.1| Triticum aestivum peroxidase (pxc1A) gene, pxc1A-2A allele, complete cds Length = 2458 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 156 gccatgatcaagatgggcaacatcgcgcccaagaccggcacgcagggccagatc 209 ||||||||||||||||| ||||||||||| ||||| ||||||||||||||| Sbjct: 1767 gccatgatcaagatgggaaacatcgcgccgctcaccgggacgcagggccagatc 1820
>emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete genome; segment 18/29 Length = 292100 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 48 ctgggcctgcacttctccgacgaccag 74 ||||||||||||||||||||||||||| Sbjct: 211549 ctgggcctgcacttctccgacgaccag 211575
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 48 ctgggcctgcacttctccgacgaccag 74 ||||||||||||||||||||||||||| Sbjct: 4215673 ctgggcctgcacttctccgacgaccag 4215647
>gb|AY506494.1| Triticum aestivum PXC1-like gene, complete sequence Length = 1165 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 156 gccatgatcaagatgggcaacatcgcgcccaagaccggcacgcagggccagatc 209 |||||||| |||||||| ||||||||||| ||||| ||||||||||||||| Sbjct: 1082 gccatgattaagatgggaaacatcgcgccgctcaccgggacgcagggccagatc 1135
>gb|AY506491.1| Triticum aestivum PXB3-like gene, complete sequence Length = 1163 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 156 gccatgatcaagatgggcaacatcgcgcccaagaccggcacgcagggccagatc 209 |||||||| |||||||| ||||||||||| ||||| ||||||||||||||| Sbjct: 1078 gccatgattaagatgggaaacatcgcgccgctcaccgggacgcagggccagatc 1131
>gb|AY506490.1| Triticum aestivum PXB2-like gene, partial sequence Length = 1161 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 156 gccatgatcaagatgggcaacatcgcgcccaagaccggcacgcagggccagatc 209 |||||||| |||||||| ||||||||||| ||||| ||||||||||||||| Sbjct: 1078 gccatgattaagatgggaaacatcgcgccgctcaccgggacgcagggccagatc 1131
>gb|AY506489.1| Triticum aestivum PXB1-like gene, complete sequence Length = 1076 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 156 gccatgatcaagatgggcaacatcgcgcccaagaccggcacgcagggccagatc 209 |||||||| |||||||| ||||||||||| ||||| ||||||||||||||| Sbjct: 993 gccatgattaagatgggaaacatcgcgccgctcaccgggacgcagggccagatc 1046
>gb|AY506487.1| Triticum aestivum PXA1-like gene, complete sequence Length = 1165 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 156 gccatgatcaagatgggcaacatcgcgcccaagaccggcacgcagggccagatc 209 |||||||| |||||||| ||||||||||| ||||| ||||||||||||||| Sbjct: 1082 gccatgattaagatgggaaacatcgcgccgctcaccgggacgcagggccagatc 1135
>gb|U12314.1|CCU12314 Cenchrus ciliaris clone PX7 peroxidase mRNA, complete cds Length = 1335 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 156 gccatgatcaagatgggcaacatcg 180 ||||||||||||||||||||||||| Sbjct: 907 gccatgatcaagatgggcaacatcg 931
>gb|AY506488.1| Triticum aestivum PXA2-like gene, complete sequence Length = 1165 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Plus Query: 159 atgatcaagatgggcaacatcgcgcccaagaccggcacgcagggccagatc 209 |||||||||||||| ||||||||||| ||||| |||||||| |||||| Sbjct: 1085 atgatcaagatgggaaacatcgcgccgctcaccgggacgcaggggcagatc 1135
>ref|XM_737243.1| Plasmodium chabaudi chabaudi microfibril-associated protein (PC000485.02.0) partial mRNA Length = 960 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 237 tcctcctcctcttcgtccgcttc 259 ||||||||||||||||||||||| Sbjct: 134 tcctcctcctcttcgtccgcttc 112
>gb|AF248863.1|AF248863 Strongylocentrotus purpuratus myosin V, complete cds Length = 5751 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 76 tcatccgcaacgccaccctcaag 98 ||||||||||||||||||||||| Sbjct: 2651 tcatccgcaacgccaccctcaag 2673
>ref|NM_214490.1| Strongylocentrotus purpuratus myosin V (LOC373234), mRNA Length = 5751 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 76 tcatccgcaacgccaccctcaag 98 ||||||||||||||||||||||| Sbjct: 2651 tcatccgcaacgccaccctcaag 2673
>ref|NM_183812.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1044 Score = 44.1 bits (22), Expect = 0.49 Identities = 53/62 (85%), Gaps = 1/62 (1%) Strand = Plus / Plus Query: 15 acaacaactactacaagnctggtgcagctcaacctgggcctgcacttctccgacgaccag 74 ||||||||||||||||| ||| ||| |||| ||||||| || |||||||||| ||||| Sbjct: 743 acaacaactactacaag-ctgctgccgctcgacctggggctcttcttctccgacaaccag 801 Query: 75 ct 76 || Sbjct: 802 ct 803
>gb|AC087552.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0519E07, complete sequence Length = 151399 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Plus Query: 143 caagttcatcgccgccatgatcaagatgggcaacatcg 180 ||||||| |||||||||| | |||||||||||||||| Sbjct: 107487 caagttcgccgccgccatggtgaagatgggcaacatcg 107524 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 152 cgccgccatgatcaagatgggcaac 176 |||||||||| |||||||||||||| Sbjct: 95412 cgccgccatggtcaagatgggcaac 95436
>gb|AC137614.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0034O12, complete sequence Length = 156263 Score = 44.1 bits (22), Expect = 0.49 Identities = 40/46 (86%) Strand = Plus / Minus Query: 190 ccggcacgcagggccagatccgcctcaactgcagcctcgtcaaccc 235 |||| ||||||||| ||||| | ||||||||||| |||||||||| Sbjct: 151563 ccgggacgcagggcgagatcaggctcaactgcagggtcgtcaaccc 151518
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 102 tcgtcgacgccttcgccgccaa 123 |||||||||||||||||||||| Sbjct: 1602418 tcgtcgacgccttcgccgccaa 1602439
>gb|AC124144.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0099P06, complete sequence Length = 135117 Score = 44.1 bits (22), Expect = 0.49 Identities = 40/46 (86%) Strand = Plus / Minus Query: 190 ccggcacgcagggccagatccgcctcaactgcagcctcgtcaaccc 235 |||| ||||||||| ||||| | ||||||||||| |||||||||| Sbjct: 8279 ccgggacgcagggcgagatcaggctcaactgcagggtcgtcaaccc 8234
>ref|XM_755010.1| Ustilago maydis 521 hypothetical protein (UM03956.1) partial mRNA Length = 492 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 235 cgtcctcctcctcttcgtccgcttct 260 ||||||||||||| |||||||||||| Sbjct: 487 cgtcctcctcctcgtcgtccgcttct 462
>emb|X85227.1|TAPOX1 T.aestivum pox1 gene Length = 1722 Score = 44.1 bits (22), Expect = 0.49 Identities = 37/42 (88%) Strand = Plus / Plus Query: 168 atgggcaacatcgcgcccaagaccggcacgcagggccagatc 209 ||||| ||||||||||| ||||| || |||||||| |||||| Sbjct: 1399 atggggaacatcgcgccaaagacggggacgcaggggcagatc 1440
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.49 Identities = 40/46 (86%) Strand = Plus / Minus Query: 190 ccggcacgcagggccagatccgcctcaactgcagcctcgtcaaccc 235 |||| ||||||||| ||||| | ||||||||||| |||||||||| Sbjct: 3585932 ccgggacgcagggcgagatcaggctcaactgcagggtcgtcaaccc 3585887 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Plus Query: 143 caagttcatcgccgccatgatcaagatgggcaacatcg 180 ||||||| |||||||||| | |||||||||||||||| Sbjct: 2014610 caagttcgccgccgccatggtgaagatgggcaacatcg 2014647 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 152 cgccgccatgatcaagatgggcaac 176 |||||||||| |||||||||||||| Sbjct: 2002535 cgccgccatggtcaagatgggcaac 2002559 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 ctcctcctcttcgtccgctt 258 |||||||||||||||||||| Sbjct: 694924 ctcctcctcttcgtccgctt 694905
>dbj|AK102154.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086E17, full insert sequence Length = 1344 Score = 44.1 bits (22), Expect = 0.49 Identities = 40/46 (86%) Strand = Plus / Plus Query: 190 ccggcacgcagggccagatccgcctcaactgcagcctcgtcaaccc 235 |||| ||||||||| ||||| | ||||||||||| |||||||||| Sbjct: 992 ccgggacgcagggcgagatcaggctcaactgcagggtcgtcaaccc 1037
>dbj|AK067416.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013102I07, full insert sequence Length = 1358 Score = 44.1 bits (22), Expect = 0.49 Identities = 40/46 (86%) Strand = Plus / Plus Query: 190 ccggcacgcagggccagatccgcctcaactgcagcctcgtcaaccc 235 |||| ||||||||| ||||| | ||||||||||| |||||||||| Sbjct: 991 ccgggacgcagggcgagatcaggctcaactgcagggtcgtcaaccc 1036
>dbj|AK063587.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A08, full insert sequence Length = 826 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Plus Query: 143 caagttcatcgccgccatgatcaagatgggcaacatcg 180 ||||||| |||||||||| | |||||||||||||||| Sbjct: 533 caagttcgccgccgccatgctgaagatgggcaacatcg 570
>dbj|AK058883.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-B11, full insert sequence Length = 1144 Score = 44.1 bits (22), Expect = 0.49 Identities = 53/62 (85%), Gaps = 1/62 (1%) Strand = Plus / Plus Query: 15 acaacaactactacaagnctggtgcagctcaacctgggcctgcacttctccgacgaccag 74 ||||||||||||||||| ||| ||| |||| ||||||| || |||||||||| ||||| Sbjct: 542 acaacaactactacaag-ctgctgccgctcgacctggggctcttcttctccgacaaccag 600 Query: 75 ct 76 || Sbjct: 601 ct 602
>tpe|BN000601.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx72 gene for class III peroxidase 72 precursor, exons 1-3 Length = 1816 Score = 44.1 bits (22), Expect = 0.49 Identities = 40/46 (86%) Strand = Plus / Plus Query: 190 ccggcacgcagggccagatccgcctcaactgcagcctcgtcaaccc 235 |||| ||||||||| ||||| | ||||||||||| |||||||||| Sbjct: 1686 ccgggacgcagggcgagatcaggctcaactgcagggtcgtcaaccc 1731
>tpe|BN000599.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx70 gene for class III peroxidase 70 precursor, exons 1-2 Length = 1356 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Plus Query: 143 caagttcatcgccgccatgatcaagatgggcaacatcg 180 ||||||| |||||||||| | |||||||||||||||| Sbjct: 1254 caagttcgccgccgccatggtgaagatgggcaacatcg 1291
>tpe|BN000542.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx13 gene for class III peroxidase 13 precursor, exons 1-3 Length = 9315 Score = 44.1 bits (22), Expect = 0.49 Identities = 53/62 (85%), Gaps = 1/62 (1%) Strand = Plus / Plus Query: 15 acaacaactactacaagnctggtgcagctcaacctgggcctgcacttctccgacgaccag 74 ||||||||||||||||| ||| ||| |||| ||||||| || |||||||||| ||||| Sbjct: 9014 acaacaactactacaag-ctgctgccgctcgacctggggctcttcttctccgacaaccag 9072 Query: 75 ct 76 || Sbjct: 9073 ct 9074
>gb|AY506486.1| Triticum aestivum PXCW4-like gene, complete sequence Length = 2435 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 159 atgatcaagatgggcaacatcgcgc 183 |||||||||||||| |||||||||| Sbjct: 1756 atgatcaagatgggaaacatcgcgc 1780
>gb|AY206411.1| Ipomoea batatas anionic peroxidase swpa6 mRNA, complete cds Length = 1284 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 152 cgccgccatgatcaagatgggcaac 176 |||||||||| |||||||||||||| Sbjct: 994 cgccgccatggtcaagatgggcaac 1018
>ref|NM_183630.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1011 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 152 cgccgccatgatcaagatgggcaac 176 |||||||||| |||||||||||||| Sbjct: 927 cgccgccatggtcaagatgggcaac 951
>gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 3, complete sequence Length = 2105742 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 cgtcctcctcctcttcgtccgcttc 259 |||||||||||||||||||| |||| Sbjct: 1651301 cgtcctcctcctcttcgtcctcttc 1651277
>gb|AC168204.1| Medicago truncatula chromosome 7 BAC clone mth2-64h15, complete sequence Length = 45758 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 471 ttaattgagcaaaaataataa 491 ||||||||||||||||||||| Sbjct: 12288 ttaattgagcaaaaataataa 12268
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 189 accggcacgcagggccagatccgcctcaactgc 221 ||||||||||||||| ||||| | ||||||||| Sbjct: 12591338 accggcacgcagggcgagatcaggctcaactgc 12591370
>ref|XM_569755.1| Cryptococcus neoformans var. neoformans JEC21 cytoplasm protein (CNC05530) partial mRNA Length = 2291 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 cgtcctcctcctcttcgtccgcttc 259 |||||||||||||||||||| |||| Sbjct: 1493 cgtcctcctcctcttcgtcctcttc 1469
>ref|XM_569756.1| Cryptococcus neoformans var. neoformans JEC21 cytoplasm protein (CNC05530) partial mRNA Length = 1907 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 cgtcctcctcctcttcgtccgcttc 259 |||||||||||||||||||| |||| Sbjct: 1493 cgtcctcctcctcttcgtcctcttc 1469
>ref|XM_569757.1| Cryptococcus neoformans var. neoformans JEC21 cytoplasm protein (CNC05530) partial mRNA Length = 1843 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 cgtcctcctcctcttcgtccgcttc 259 |||||||||||||||||||| |||| Sbjct: 1429 cgtcctcctcctcttcgtcctcttc 1405
>gb|AC136974.11| Medicago truncatula clone mth2-22e9, complete sequence Length = 124037 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 471 ttaattgagcaaaaataataa 491 ||||||||||||||||||||| Sbjct: 11505 ttaattgagcaaaaataataa 11525
>emb|AL121869.19|HSB138P15 Human DNA sequence from clone RP13-138P15 on chromosome X Contains a keratin 18 (KRT18) pseudogene, a pseudogene similar to part of SNX3 (sorting nexin 3) and the 3' end of the PCDH11X gene for protocadherin 11 X-linked, complete sequence Length = 171727 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 507 aagaagagatatattattatg 527 ||||||||||||||||||||| Sbjct: 37602 aagaagagatatattattatg 37582
>emb|AL731867.27| Mouse DNA sequence from clone RP23-73A4 on chromosome 11 Contains the 5' end of the Kcnip1 gene for Kv channel-interacting protein 1, the Kcnmb1 gene for potassium large conductance calcium-activated channel, subfamily M, beta member 1 and the 3' end of a novel gene, complete sequence Length = 173783 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 237 tcctcctcctcttcgtccgcttctt 261 |||||||||||||||||| |||||| Sbjct: 24811 tcctcctcctcttcgtccccttctt 24787
>gb|AC131175.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0030D15, from chromosome 3, complete sequence Length = 151972 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 189 accggcacgcagggccagatccgcctcaactgc 221 ||||||||||||||| ||||| | ||||||||| Sbjct: 85651 accggcacgcagggcgagatcaggctcaactgc 85619
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 237 tcctcctcctcttcgtccgct 257 ||||||||||||||||||||| Sbjct: 20349440 tcctcctcctcttcgtccgct 20349420
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 189 accggcacgcagggccagatccgcctcaactgc 221 ||||||||||||||| ||||| | ||||||||| Sbjct: 12588101 accggcacgcagggcgagatcaggctcaactgc 12588133
>dbj|AP002820.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0702D12 Length = 137332 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 152 cgccgccatgatcaagatgggcaac 176 |||||||||| |||||||||||||| Sbjct: 2449 cgccgccatggtcaagatgggcaac 2425
>dbj|AP002482.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0706B05 Length = 187835 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 152 cgccgccatgatcaagatgggcaac 176 |||||||||| |||||||||||||| Sbjct: 174258 cgccgccatggtcaagatgggcaac 174234
>gb|AC010081.4|AC010081 Homo sapiens BAC clone RP11-65E7 from Y, complete sequence Length = 176781 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 507 aagaagagatatattattatg 527 ||||||||||||||||||||| Sbjct: 10007 aagaagagatatattattatg 9987
>gb|AC105137.17| Homo sapiens chromosome 15, clone CTD-2562G15, complete sequence Length = 178059 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 467 gttgttaattgagcaaaaata 487 ||||||||||||||||||||| Sbjct: 79291 gttgttaattgagcaaaaata 79311
>gb|AC133184.3| Mus musculus BAC clone RP24-186A17 from chromosome 5, complete sequence Length = 169357 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 237 tcctcctcctcttcgtccgcttctt 261 |||||||||||||| |||||||||| Sbjct: 59775 tcctcctcctcttcctccgcttctt 59751
>dbj|AP004731.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0016D02 Length = 157822 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 237 tcctcctcctcttcgtccgct 257 ||||||||||||||||||||| Sbjct: 72835 tcctcctcctcttcgtccgct 72815
>dbj|AK106109.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-D07, full insert sequence Length = 1270 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 189 accggcacgcagggccagatccgcctcaactgc 221 ||||||||||||||| ||||| | ||||||||| Sbjct: 1007 accggcacgcagggcgagatcaggctcaactgc 1039
>dbj|AK104573.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-H05, full insert sequence Length = 1265 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 189 accggcacgcagggccagatccgcctcaactgc 221 ||||||||||||||| ||||| | ||||||||| Sbjct: 1007 accggcacgcagggcgagatcaggctcaactgc 1039
>dbj|AK104508.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-G09, full insert sequence Length = 1270 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 189 accggcacgcagggccagatccgcctcaactgc 221 ||||||||||||||| ||||| | ||||||||| Sbjct: 1007 accggcacgcagggcgagatcaggctcaactgc 1039
>dbj|AK104644.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-G05, full insert sequence Length = 1270 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 189 accggcacgcagggccagatccgcctcaactgc 221 ||||||||||||||| ||||| | ||||||||| Sbjct: 1007 accggcacgcagggcgagatcaggctcaactgc 1039
>dbj|AK104494.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-C02, full insert sequence Length = 1252 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 189 accggcacgcagggccagatccgcctcaactgc 221 ||||||||||||||| ||||| | ||||||||| Sbjct: 1007 accggcacgcagggcgagatcaggctcaactgc 1039
>dbj|AK104487.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-B03, full insert sequence Length = 1215 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 189 accggcacgcagggccagatccgcctcaactgc 221 ||||||||||||||| ||||| | ||||||||| Sbjct: 1007 accggcacgcagggcgagatcaggctcaactgc 1039
>dbj|AK104470.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D07, full insert sequence Length = 1270 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 189 accggcacgcagggccagatccgcctcaactgc 221 ||||||||||||||| ||||| | ||||||||| Sbjct: 1007 accggcacgcagggcgagatcaggctcaactgc 1039
>dbj|AK104395.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-C06, full insert sequence Length = 1270 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 189 accggcacgcagggccagatccgcctcaactgc 221 ||||||||||||||| ||||| | ||||||||| Sbjct: 1007 accggcacgcagggcgagatcaggctcaactgc 1039
>dbj|AK104156.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-C01, full insert sequence Length = 1264 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 189 accggcacgcagggccagatccgcctcaactgc 221 ||||||||||||||| ||||| | ||||||||| Sbjct: 1004 accggcacgcagggcgagatcaggctcaactgc 1036
>dbj|AK067107.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094O18, full insert sequence Length = 1263 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 189 accggcacgcagggccagatccgcctcaactgc 221 ||||||||||||||| ||||| | ||||||||| Sbjct: 1003 accggcacgcagggcgagatcaggctcaactgc 1035
>dbj|AK061545.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-A04, full insert sequence Length = 1031 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 189 accggcacgcagggccagatccgcctcaactgc 221 ||||||||||||||| ||||| | ||||||||| Sbjct: 771 accggcacgcagggcgagatcaggctcaactgc 803
>gb|AY106338.1| Zea mays PCO074336 mRNA sequence Length = 849 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 418 agtttgctgaaatgccctttc 438 ||||||||||||||||||||| Sbjct: 36 agtttgctgaaatgccctttc 56
>tpe|BN000598.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx69 gene for class III peroxidase 69 precursor, exons 1-2 Length = 1108 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 152 cgccgccatgatcaagatgggcaac 176 |||||||||| |||||||||||||| Sbjct: 1024 cgccgccatggtcaagatgggcaac 1048
>tpe|BN000570.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx41 gene for class III peroxidase 41 precursor, exons 1-4 Length = 5018 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 189 accggcacgcagggccagatccgcctcaactgc 221 ||||||||||||||| ||||| | ||||||||| Sbjct: 4971 accggcacgcagggcgagatcaggctcaactgc 5003
>tpe|BN000535.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx6 gene for class III peroxidase 6 precursor, exons 1-2 Length = 6015 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 152 cgccgccatgatcaagatgggcaac 176 |||||||||| |||||||||||||| Sbjct: 5931 cgccgccatggtcaagatgggcaac 5955
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 316 tggcctgatgtgtgcgtgctt 336 ||||||||||||||||||||| Sbjct: 3726459 tggcctgatgtgtgcgtgctt 3726479
>gb|AC154880.17| Mus musculus chromosome 15, clone RP24-191N3, complete sequence Length = 184220 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 237 tcctcctcctcttcgtccgcttctt 261 |||||||||||||||||| |||||| Sbjct: 153260 tcctcctcctcttcgtcctcttctt 153236
>gb|AY206414.1| Ipomoea batatas anionic peroxidase swpb3 mRNA, complete cds Length = 1290 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 gccgccatgatcaagatggg 172 |||||||||||||||||||| Sbjct: 927 gccgccatgatcaagatggg 946
>gb|BC043352.2| Homo sapiens zinc finger and BTB domain containing 4, mRNA (cDNA clone MGC:49935 IMAGE:6175382), complete cds Length = 5888 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 cgtcctcctcctcttcgtcc 254 |||||||||||||||||||| Sbjct: 2208 cgtcctcctcctcttcgtcc 2189
>ref|XM_467050.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1887 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 tccgcaacgccaccctcaag 98 |||||||||||||||||||| Sbjct: 323 tccgcaacgccaccctcaag 342
>ref|XM_464808.1| Oryza sativa (japonica cultivar-group), mRNA Length = 411 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 tcctcctcctcttcgtccgc 256 |||||||||||||||||||| Sbjct: 376 tcctcctcctcttcgtccgc 357
>ref|NM_193315.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1011 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 157 ccatgatcaagatgggcaacatcgcgcc 184 ||||| ||||||||||||||||| |||| Sbjct: 923 ccatggtcaagatgggcaacatctcgcc 950
>ref|XM_479517.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1229 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 152 cgccgccatgatcaagatgggcaacatc 179 |||||||||| | ||||||||||||||| Sbjct: 951 cgccgccatggtgaagatgggcaacatc 978
>ref|XM_476366.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1050 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 198 cagggccagatccgcctcaactgcagcctcgtcaac 233 |||||| ||||||||||||| |||| | |||||||| Sbjct: 1006 cagggcgagatccgcctcaagtgcaacgtcgtcaac 1041
>gb|BT018818.1| Zea mays clone EL01N0532A09.d mRNA sequence Length = 1682 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 98 gccttcgtcgacgccttcgccgccaacg 125 |||||| ||||||| ||||||||||||| Sbjct: 109 gccttcctcgacgcgttcgccgccaacg 136
>gb|AY432607.1| Aedes aegypti ASAP ID: 35787 transcription factor mRNA sequence Length = 348 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 cgtcctcctcctcttcgtcc 254 |||||||||||||||||||| Sbjct: 169 cgtcctcctcctcttcgtcc 150
>ref|XM_871492.1| PREDICTED: Bos taurus similar to adenylate cyclase 4 (LOC619170), partial mRNA Length = 690 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 237 tcctcctcctcttcgtccgcttct 260 ||||||||||||||||| |||||| Sbjct: 48 tcctcctcctcttcgtctgcttct 71
>ref|XM_957839.1| Neurospora crassa OR74A hypothetical protein (NCU06216.1) partial mRNA Length = 3789 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 234 ccgtcctcctcctcttcgtccgcttctt 261 ||||||||||||||||| ||| |||||| Sbjct: 3701 ccgtcctcctcctcttcttcctcttctt 3674
>ref|XM_326070.1| Neurospora crassa OR74A hypothetical protein (NCU06216.1) partial mRNA Length = 3789 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 234 ccgtcctcctcctcttcgtccgcttctt 261 ||||||||||||||||| ||| |||||| Sbjct: 3701 ccgtcctcctcctcttcttcctcttctt 3674
>gb|DQ481665.1| Takifugu rubripes HoxBa gene cluster, complete sequence Length = 294716 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 cgtcctcctcctcttcgtcc 254 |||||||||||||||||||| Sbjct: 188744 cgtcctcctcctcttcgtcc 188763
>gb|BC015902.1| Homo sapiens zinc finger and BTB domain containing 4, mRNA (cDNA clone IMAGE:3915660), partial cds Length = 3226 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 cgtcctcctcctcttcgtcc 254 |||||||||||||||||||| Sbjct: 183 cgtcctcctcctcttcgtcc 164
>ref|XM_805852.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053510823.60) partial mRNA Length = 2049 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 cgtcctcctcctcttcgtcc 254 |||||||||||||||||||| Sbjct: 1858 cgtcctcctcctcttcgtcc 1839
>ref|XM_537394.2| PREDICTED: Canis familiaris similar to adenylate cyclase 4 (LOC480271), mRNA Length = 3299 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 237 tcctcctcctcttcgtccgcttct 260 ||||||||||||||||| |||||| Sbjct: 1871 tcctcctcctcttcgtctgcttct 1894
>ref|XM_725146.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY02366) partial mRNA Length = 4472 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 503 aattaagaagagatatattattat 526 ||||||||||||||||||| |||| Sbjct: 4338 aattaagaagagatatatttttat 4315
>ref|XM_670697.1| Plasmodium berghei strain ANKA hypothetical protein (PB103910.00.0) partial mRNA Length = 3190 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 473 aattgagcaaaaataataat 492 |||||||||||||||||||| Sbjct: 1373 aattgagcaaaaataataat 1392
>gb|AC113189.11| Homo sapiens chromosome 17, clone RP11-104H15, complete sequence Length = 184349 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 cgtcctcctcctcttcgtcc 254 |||||||||||||||||||| Sbjct: 113132 cgtcctcctcctcttcgtcc 113151
>gb|AY302699.1| Homo sapiens KAISO-like zinc finger protein 1 mRNA, complete cds Length = 5801 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 cgtcctcctcctcttcgtcc 254 |||||||||||||||||||| Sbjct: 2099 cgtcctcctcctcttcgtcc 2080
>emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete genome; segment 4/16 Length = 349497 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 agctcatccgcaacgccacc 92 |||||||||||||||||||| Sbjct: 26873 agctcatccgcaacgccacc 26854
>ref|NM_020899.2| Homo sapiens zinc finger and BTB domain containing 4 (ZBTB4), mRNA Length = 5888 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 cgtcctcctcctcttcgtcc 254 |||||||||||||||||||| Sbjct: 2208 cgtcctcctcctcttcgtcc 2189
>dbj|AK127065.1| Homo sapiens cDNA FLJ45122 fis, clone BRAWH3036247, weakly similar to Zinc finger protein 228 Length = 3772 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 233 cccgtcctcctcctcttcgtccgcttct 260 |||||||||||||||||| ||| ||||| Sbjct: 1241 cccgtcctcctcctcttcttcctcttct 1214
>dbj|AK122971.1| Homo sapiens cDNA FLJ16715 fis, clone UTERU3000298, weakly similar to ZINC FINGER PROTEIN 151 Length = 5009 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 cgtcctcctcctcttcgtcc 254 |||||||||||||||||||| Sbjct: 2083 cgtcctcctcctcttcgtcc 2064
>dbj|AK122826.1| Homo sapiens cDNA FLJ16429 fis, clone BRACE3008238 Length = 4437 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 cgtcctcctcctcttcgtcc 254 |||||||||||||||||||| Sbjct: 1511 cgtcctcctcctcttcgtcc 1492
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 96 aagccttcgtcgacgccttcgccg 119 |||||||||||| ||||||||||| Sbjct: 4351827 aagccttcgtcgccgccttcgccg 4351850
>gb|AF232689.2| Rat cytomegalovirus Maastricht, complete genome Length = 230138 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 cgtcctcctcctcttcgtcc 254 |||||||||||||||||||| Sbjct: 29323 cgtcctcctcctcttcgtcc 29304
>gb|AC182808.1| Gasterosteus aculeatus clone VMRC28-105K03, complete sequence Length = 124886 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 tgaaatgccctttccgatgg 444 |||||||||||||||||||| Sbjct: 120324 tgaaatgccctttccgatgg 120343
>gb|AC092041.2| Homo sapiens chromosome 3 clone RP11-132K4, complete sequence Length = 171461 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 233 cccgtcctcctcctcttcgtccgcttct 260 |||||||||||||||||| ||| ||||| Sbjct: 92607 cccgtcctcctcctcttcttcctcttct 92634
>ref|XM_683538.1| PREDICTED: Danio rerio similar to zinc finger protein 567 (LOC560148), mRNA Length = 1697 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 237 tcctcctcctcttcgtccgcttct 260 |||||||||||||| ||||||||| Sbjct: 565 tcctcctcctcttcatccgcttct 542
>gb|AY757327.1| Oreochromis niloticus isolate B6a Hox protein gene, partial cds Length = 225 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 cgtcctcctcctcttcgtcc 254 |||||||||||||||||||| Sbjct: 164 cgtcctcctcctcttcgtcc 183
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 cgtcctcctcctcttcgtcc 254 |||||||||||||||||||| Sbjct: 16906171 cgtcctcctcctcttcgtcc 16906152
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 152 cgccgccatgatcaagatgggcaacatc 179 |||||||||| | ||||||||||||||| Sbjct: 28637329 cgccgccatggtgaagatgggcaacatc 28637302 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 198 cagggccagatccgcctcaactgcagcctcgtcaac 233 |||||| ||||||||||||| |||| | |||||||| Sbjct: 252823 cagggcgagatccgcctcaagtgcaacgtcgtcaac 252858
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 tccgcaacgccaccctcaag 98 |||||||||||||||||||| Sbjct: 26120818 tccgcaacgccaccctcaag 26120799 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 tcctcctcctcttcgtccgc 256 |||||||||||||||||||| Sbjct: 8320019 tcctcctcctcttcgtccgc 8320038 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 152 cgccgccatgatcaagatgggcaacatc 179 |||||||||||| |||||||| |||||| Sbjct: 7938613 cgccgccatgataaagatggggaacatc 7938640
>gb|AC131943.1| Homo sapiens BAC clone CTD-2242C10 from 4, complete sequence Length = 135585 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 catccgcaacgccaccctca 96 |||||||||||||||||||| Sbjct: 132979 catccgcaacgccaccctca 132960
>gb|AC018889.7| Homo sapiens BAC clone RP11-479F13 from 2, complete sequence Length = 94084 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 516 tatattattatggtgatcta 535 |||||||||||||||||||| Sbjct: 33043 tatattattatggtgatcta 33062
>dbj|AP004233.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0065J17 Length = 139014 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 157 ccatgatcaagatgggcaacatcgcgcc 184 ||||| ||||||||||||||||| |||| Sbjct: 60138 ccatggtcaagatgggcaacatctcgcc 60165
>gb|AC026815.8|AC026815 Oryza sativa chromosome 10 BAC OSJNBa0079L16 genomic sequence, complete sequence Length = 147452 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 cgtcctcctcctcttcgtcc 254 |||||||||||||||||||| Sbjct: 90623 cgtcctcctcctcttcgtcc 90604
>gb|AF256078.1|AF256078 Drosophila simulans strain sim8 cut protein (ct) gene, partial cds Length = 1090 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 cgtcctcctcctcttcgtcc 254 |||||||||||||||||||| Sbjct: 618 cgtcctcctcctcttcgtcc 599
>gb|AF256077.1|AF256077 Drosophila simulans strain sim7 cut protein (ct) gene, partial cds Length = 1090 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 cgtcctcctcctcttcgtcc 254 |||||||||||||||||||| Sbjct: 618 cgtcctcctcctcttcgtcc 599
>gb|AF256076.1|AF256076 Drosophila simulans strain sim5 cut protein (ct) gene, partial cds Length = 1090 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 cgtcctcctcctcttcgtcc 254 |||||||||||||||||||| Sbjct: 618 cgtcctcctcctcttcgtcc 599
>gb|AF256075.1|AF256075 Drosophila simulans strain sim4 cut protein (ct) gene, partial cds Length = 1090 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 cgtcctcctcctcttcgtcc 254 |||||||||||||||||||| Sbjct: 618 cgtcctcctcctcttcgtcc 599
>gb|AF256074.1|AF256074 Drosophila simulans strain sim3 cut protein (ct) gene, partial cds Length = 1090 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 cgtcctcctcctcttcgtcc 254 |||||||||||||||||||| Sbjct: 618 cgtcctcctcctcttcgtcc 599
>gb|AF256073.1|AF256073 Drosophila simulans strain sim2 cut protein (ct) gene, partial cds Length = 1090 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 cgtcctcctcctcttcgtcc 254 |||||||||||||||||||| Sbjct: 618 cgtcctcctcctcttcgtcc 599
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 98 gccttcgtcgacgccttcgccgcc 121 ||||||| |||||||||||||||| Sbjct: 5226825 gccttcgccgacgccttcgccgcc 5226802
>dbj|AP005187.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0446F04 Length = 175390 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 198 cagggccagatccgcctcaactgcagcctcgtcaac 233 |||||| ||||||||||||| |||| | |||||||| Sbjct: 87687 cagggcgagatccgcctcaagtgcaacgtcgtcaac 87722
>dbj|AP004673.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0617C02 Length = 135605 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 198 cagggccagatccgcctcaactgcagcctcgtcaac 233 |||||| ||||||||||||| |||| | |||||||| Sbjct: 4822 cagggcgagatccgcctcaagtgcaacgtcgtcaac 4857
>dbj|AP003817.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1167_G06 Length = 112386 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 152 cgccgccatgatcaagatgggcaacatc 179 |||||||||| | ||||||||||||||| Sbjct: 103287 cgccgccatggtgaagatgggcaacatc 103260
>dbj|AP005613.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0082C09 Length = 160665 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 152 cgccgccatgatcaagatgggcaacatc 179 |||||||||||| |||||||| |||||| Sbjct: 62028 cgccgccatgataaagatggggaacatc 62055
>dbj|AP004868.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0048B08 Length = 146874 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 tccgcaacgccaccctcaag 98 |||||||||||||||||||| Sbjct: 17645 tccgcaacgccaccctcaag 17626
>dbj|AP004839.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0519A12 Length = 156676 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 tccgcaacgccaccctcaag 98 |||||||||||||||||||| Sbjct: 128264 tccgcaacgccaccctcaag 128245
>dbj|AP005614.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0090H18 Length = 174842 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 tcctcctcctcttcgtccgc 256 |||||||||||||||||||| Sbjct: 96690 tcctcctcctcttcgtccgc 96709
>dbj|AK108037.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-C10, full insert sequence Length = 1326 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 152 cgccgccatgatcaagatgggcaacatc 179 |||||||||||| |||||||| |||||| Sbjct: 1029 cgccgccatgataaagatggggaacatc 1056
>dbj|AK105363.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-E09, full insert sequence Length = 1391 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 157 ccatgatcaagatgggcaacatcgcgcc 184 ||||| ||||||||||||||||| |||| Sbjct: 1002 ccatggtcaagatgggcaacatctcgcc 1029
>emb|AM055942.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ia Length = 1923819 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 tcctcctcttcgtccgcttc 259 |||||||||||||||||||| Sbjct: 742516 tcctcctcttcgtccgcttc 742535
>dbj|AK060984.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-B02, full insert sequence Length = 1229 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 152 cgccgccatgatcaagatgggcaacatc 179 |||||||||| | ||||||||||||||| Sbjct: 951 cgccgccatggtgaagatgggcaacatc 978
>dbj|AP003757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1409_C08 Length = 90673 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 152 cgccgccatgatcaagatgggcaacatc 179 |||||||||| | ||||||||||||||| Sbjct: 12499 cgccgccatggtgaagatgggcaacatc 12472
>gb|AY105520.1| Zea mays PCO080795 mRNA sequence Length = 1346 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 157 ccatgatcaagatgggcaacatcgcgcc 184 ||||| ||||||||||||||||| |||| Sbjct: 1026 ccatggtcaagatgggcaacatctcgcc 1053
>tpe|BN000644.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx115 gene for class III peroxidase 115 precursor, exons 1-3 Length = 1751 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 152 cgccgccatgatcaagatgggcaacatc 179 |||||||||| | ||||||||||||||| Sbjct: 1664 cgccgccatggtgaagatgggcaacatc 1691
>tpe|BN000623.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx94 gene for class III peroxidase 94 precursor, exon 1 Length = 1050 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 198 cagggccagatccgcctcaactgcagcctcgtcaac 233 |||||| ||||||||||||| |||| | |||||||| Sbjct: 1006 cagggcgagatccgcctcaagtgcaacgtcgtcaac 1041
>tpe|BN000559.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx30 gene for class III peroxidase 30 precursor, exons 1-2 Length = 1059 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 152 cgccgccatgatcaagatgggcaacatc 179 |||||||||||| |||||||| |||||| Sbjct: 969 cgccgccatgataaagatggggaacatc 996
>tpe|BN000546.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx17 gene for class III peroxidase 17 precursor, exons 1-4 Length = 4115 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 157 ccatgatcaagatgggcaacatcgcgcc 184 ||||| ||||||||||||||||| |||| Sbjct: 4027 ccatggtcaagatgggcaacatctcgcc 4054
>gb|AC006059.3|AC006059 Homo sapiens PAC RPCI4-613B23 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 185161 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 233 cccgtcctcctcctcttcgtccgcttct 260 |||||||||||||||||| ||| ||||| Sbjct: 109156 cccgtcctcctcctcttcttcctcttct 109183
>gb|AC113326.9| Mus musculus chromosome 1, clone RP23-454G7, complete sequence Length = 192734 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 aaaaataataatgtggcatg 500 |||||||||||||||||||| Sbjct: 105716 aaaaataataatgtggcatg 105697
>gb|AC139040.8| Mus musculus chromosome 19, clone RP23-292H20, complete sequence Length = 206197 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 444 gtccatcttgtacaagtgtt 463 |||||||||||||||||||| Sbjct: 49052 gtccatcttgtacaagtgtt 49033
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 tcgtcgacgccttcgccgcc 121 |||||||||||||||||||| Sbjct: 3069474 tcgtcgacgccttcgccgcc 3069493
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 cgtcctcctcctcttcgtcc 254 |||||||||||||||||||| Sbjct: 16915211 cgtcctcctcctcttcgtcc 16915192
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 ccgtcctcctcctcttcgtc 253 |||||||||||||||||||| Sbjct: 1752614 ccgtcctcctcctcttcgtc 1752633
>emb|AL663081.10| Mouse DNA sequence from clone RP23-138F13 on chromosome X, complete sequence Length = 206915 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 238 cctcctcctcttcgtccgcttctt 261 ||||||||||||||||| |||||| Sbjct: 120912 cctcctcctcttcgtcctcttctt 120935
>gb|AC093921.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0041A22, complete sequence Length = 117919 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 ctcctcctcttcgtccgctt 258 |||||||||||||||||||| Sbjct: 40123 ctcctcctcttcgtccgctt 40104
>dbj|AB040971.2| Homo sapiens mRNA for KIAA1538 protein, partial cds Length = 5851 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 cgtcctcctcctcttcgtcc 254 |||||||||||||||||||| Sbjct: 2183 cgtcctcctcctcttcgtcc 2164 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,230,392 Number of Sequences: 3902068 Number of extensions: 5230392 Number of successful extensions: 148512 Number of sequences better than 10.0: 164 Number of HSP's better than 10.0 without gapping: 164 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 146939 Number of HSP's gapped (non-prelim): 1529 length of query: 565 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 542 effective length of database: 17,143,297,704 effective search space: 9291667355568 effective search space used: 9291667355568 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
