ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags1o03 |
|---|---|
| Clone Library Name | barley_pub |
>YMY7_YEAST (Q03151) Hypothetical 42.1 kDa protein in SNZ1-YPK2 intergenic| region Length = 367 Score = 42.0 bits (97), Expect(2) = 5e-07 Identities = 24/55 (43%), Positives = 36/55 (65%), Gaps = 1/55 (1%) Frame = +2 Query: 167 SQPSIYVLDTPGVLVPS-IPDMETGLKLALTGAVKDSVVGEERIAKYLLSLLNIR 328 S+ IY++DTPG+ VP + D L LAL G+VK+++V A YLL L+N++ Sbjct: 213 SRNEIYLIDTPGIGVPGRVSDHNRMLGLALCGSVKNNLVDPIFQADYLLYLMNLQ 267 Score = 31.2 bits (69), Expect(2) = 5e-07 Identities = 12/29 (41%), Positives = 21/29 (72%) Frame = +3 Query: 9 MVVGVPNVGKSALINAIHRIANSXISSER 95 ++ G+PNVGKS LIN++ I ++ ++ R Sbjct: 154 LITGMPNVGKSTLINSLRTIFHNQVNMGR 182
>NOG2_NEUCR (Q7SHR8) Nucleolar GTP-binding protein 2| Length = 619 Score = 28.5 bits (62), Expect(2) = 0.039 Identities = 12/18 (66%), Positives = 16/18 (88%) Frame = +3 Query: 6 VMVVGVPNVGKSALINAI 59 V +VG PNVGKS++INA+ Sbjct: 328 VGLVGYPNVGKSSIINAL 345 Score = 27.7 bits (60), Expect(2) = 0.039 Identities = 20/58 (34%), Positives = 32/58 (55%) Frame = +2 Query: 179 IYVLDTPGVLVPSIPDMETGLKLALTGAVKDSVVGEERIAKYLLSLLNIRKTPLHWER 352 IY++D PG++ P+ D T L L G V+ V + +Y+ ++LN + P H ER Sbjct: 372 IYLIDCPGIVPPNQND--TPQDLLLRGVVR--VENVDNPEQYIPAVLN-KVKPHHMER 424
>GNL3_CAEEL (Q21086) Putative guanine nucleotide-binding protein-like 3 homolog| (Nucleostemin-1) Length = 556 Score = 29.6 bits (65), Expect(2) = 0.30 Identities = 13/20 (65%), Positives = 17/20 (85%) Frame = +3 Query: 6 VMVVGVPNVGKSALINAIHR 65 V VVG PNVGKS++IN++ R Sbjct: 262 VGVVGFPNVGKSSVINSLKR 281 Score = 23.5 bits (49), Expect(2) = 0.30 Identities = 12/45 (26%), Positives = 30/45 (66%) Frame = +2 Query: 134 VTQDIAGYKIASQPSIYVLDTPGVLVPSIPDMETGLKLALTGAVK 268 +T++I ++ +I ++D+PGV++ S D++ +++AL A++ Sbjct: 293 ITKEIQ--EVELDKNIRLIDSPGVILVSQKDLDP-IEVALKNAIR 334
>ERA_UREPA (Q9PPZ9) GTP-binding protein era homolog| Length = 300 Score = 33.9 bits (76), Expect = 0.42 Identities = 17/30 (56%), Positives = 22/30 (73%) Frame = +3 Query: 3 LVMVVGVPNVGKSALINAIHRIANSXISSE 92 +V +VG PNVGKS LINAI + S IS++ Sbjct: 7 IVAIVGKPNVGKSTLINAIMKKKVSIISNK 36
>PUR71_BRAJA (Q89IB0) Phosphoribosylaminoimidazole-succinocarboxamide synthase A| (EC 6.3.2.6) (SAICAR synthetase A) Length = 255 Score = 33.1 bits (74), Expect = 0.72 Identities = 20/72 (27%), Positives = 31/72 (43%) Frame = +2 Query: 179 IYVLDTPGVLVPSIPDMETGLKLALTGAVKDSVVGEERIAKYLLSLLNIRKTPLHWERLL 358 +Y PG L+ D T ++ V RI++YL LN P H+ R L Sbjct: 15 LYEGPEPGTLIQHFKDDATAFNAKKHQVIEGKGVLNNRISEYLFQHLNDIGVPTHFIRRL 74 Query: 359 HRREEFDEEPDV 394 + RE+ E ++ Sbjct: 75 NMREQLIREVEI 86
>ERA_BRAJA (O69162) GTP-binding protein era homolog| Length = 308 Score = 29.3 bits (64), Expect(2) = 0.85 Identities = 11/18 (61%), Positives = 15/18 (83%) Frame = +3 Query: 6 VMVVGVPNVGKSALINAI 59 V ++G PNVGKS L+NA+ Sbjct: 18 VALIGAPNVGKSTLVNAL 35 Score = 22.3 bits (46), Expect(2) = 0.85 Identities = 9/23 (39%), Positives = 13/23 (56%) Frame = +2 Query: 146 IAGYKIASQPSIYVLDTPGVLVP 214 I G I + I ++DTPG+ P Sbjct: 54 IRGIVIENNAQIILVDTPGIFSP 76
>GNL3_DROME (Q8MT06) Guanine nucleotide-binding protein-like 3 homolog| (Nucleostemin homolog) Length = 581 Score = 31.6 bits (70), Expect = 2.1 Identities = 14/28 (50%), Positives = 21/28 (75%) Frame = +3 Query: 6 VMVVGVPNVGKSALINAIHRIANSXISS 89 V VVG+PNVGKS++IN++ R + + S Sbjct: 270 VGVVGIPNVGKSSIINSLTRGRSCMVGS 297
>PUR7_RHIME (Q92PI3) Phosphoribosylaminoimidazole-succinocarboxamide synthase| (EC 6.3.2.6) (SAICAR synthetase) Length = 254 Score = 31.6 bits (70), Expect = 2.1 Identities = 19/72 (26%), Positives = 32/72 (44%) Frame = +2 Query: 179 IYVLDTPGVLVPSIPDMETGLKLALTGAVKDSVVGEERIAKYLLSLLNIRKTPLHWERLL 358 +Y PG L+ D T + V RI++Y+ + LN P H+ R L Sbjct: 15 LYEGPEPGTLIQFFKDDATAFNKKKHDVIDGKGVLNNRISEYIFTHLNKIGIPTHFIRRL 74 Query: 359 HRREEFDEEPDV 394 + RE+ +E ++ Sbjct: 75 NMREQLIKEVEI 86
>YQN2_CAEEL (Q09523) Hypothetical GTP-binding protein E02H1.2 in chromosome II| Length = 394 Score = 31.2 bits (69), Expect = 2.7 Identities = 14/27 (51%), Positives = 19/27 (70%) Frame = +3 Query: 12 VVGVPNVGKSALINAIHRIANSXISSE 92 V+G PNVGKS L N++ R S +SS+ Sbjct: 38 VIGAPNVGKSLLTNSLIRCPLSAVSSK 64
>GNL1_PANTR (Q7YR35) Guanine nucleotide-binding protein-like 1 (GTP-binding| protein HSR1) Length = 430 Score = 26.9 bits (58), Expect(2) = 3.7 Identities = 11/15 (73%), Positives = 13/15 (86%) Frame = +3 Query: 15 VGVPNVGKSALINAI 59 VG PNVGKS+LIN + Sbjct: 189 VGFPNVGKSSLINGL 203 Score = 22.3 bits (46), Expect(2) = 3.7 Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 1/73 (1%) Frame = +2 Query: 173 PSIYVLDTPGVLVPSIPDMETGLKLALTGAVKDSVVGEERIA-KYLLSLLNIRKTPLHWE 349 PS+ + D PG++ PS+ + + L G + + E A YL S + + + Sbjct: 228 PSVKLCDCPGLIFPSLLPRQLQV---LAGIYPIAQIQEPYTAVGYLASRIPV-------Q 277 Query: 350 RLLHRREEFDEEP 388 LLH R E+P Sbjct: 278 ALLHLRHPEAEDP 290
>GNL1_HUMAN (P36915) Guanine nucleotide-binding protein-like 1 (GTP-binding| protein HSR1) Length = 430 Score = 26.9 bits (58), Expect(2) = 3.7 Identities = 11/15 (73%), Positives = 13/15 (86%) Frame = +3 Query: 15 VGVPNVGKSALINAI 59 VG PNVGKS+LIN + Sbjct: 189 VGFPNVGKSSLINGL 203 Score = 22.3 bits (46), Expect(2) = 3.7 Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 1/73 (1%) Frame = +2 Query: 173 PSIYVLDTPGVLVPSIPDMETGLKLALTGAVKDSVVGEERIA-KYLLSLLNIRKTPLHWE 349 PS+ + D PG++ PS+ + + L G + + E A YL S + + + Sbjct: 228 PSVKLCDCPGLIFPSLLPRQLQV---LAGIYPIAQIQEPYTAVGYLASRIPV-------Q 277 Query: 350 RLLHRREEFDEEP 388 LLH R E+P Sbjct: 278 ALLHLRHPEAEDP 290
>ERA_AQUAE (O67800) GTP-binding protein era homolog| Length = 301 Score = 27.3 bits (59), Expect(2) = 3.8 Identities = 14/27 (51%), Positives = 17/27 (62%) Frame = +3 Query: 6 VMVVGVPNVGKSALINAIHRIANSXIS 86 V +VG PNVGKS L+N + S IS Sbjct: 6 VAIVGKPNVGKSTLLNNLLGTKVSIIS 32 Score = 21.9 bits (45), Expect(2) = 3.8 Identities = 9/23 (39%), Positives = 13/23 (56%) Frame = +2 Query: 161 IASQPSIYVLDTPGVLVPSIPDM 229 I ++ I LDTPG+ P D+ Sbjct: 48 IPNEAQIIFLDTPGIYEPKKSDV 70
>TRME_CLOTE (Q899S2) tRNA modification GTPase trmE| Length = 459 Score = 30.4 bits (67), Expect = 4.6 Identities = 12/18 (66%), Positives = 17/18 (94%) Frame = +3 Query: 6 VMVVGVPNVGKSALINAI 59 V++VG PNVGKS+L+NA+ Sbjct: 226 VVIVGKPNVGKSSLLNAL 243
>FRM4B_HUMAN (Q9Y2L6) FERM domain-containing protein 4B (GRP1-binding protein| GRSP1) Length = 980 Score = 30.4 bits (67), Expect = 4.6 Identities = 16/38 (42%), Positives = 19/38 (50%) Frame = +1 Query: 175 EHLRA*YTRCSSAKHSRHGNRSKACSDRSCQRFGGWRG 288 EHLR Y R S K H ++ SDR QR G+ G Sbjct: 843 EHLRGWYQRASGQKDQGHSPQTSFDSDRGSQRCLGFAG 880
>ENGA_BACTN (Q8A135) GTP-binding protein engA| Length = 437 Score = 30.4 bits (67), Expect = 4.6 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = +3 Query: 3 LVMVVGVPNVGKSALINAIHRIANSXISSE 92 LV +VG PNVGKS L N + + + ++ E Sbjct: 4 LVAIVGRPNVGKSTLFNRLTKTRQAIVNEE 33
>TRME_NEIMB (Q9JXL4) Probable tRNA modification GTPase trmE| Length = 448 Score = 30.4 bits (67), Expect = 4.6 Identities = 12/18 (66%), Positives = 17/18 (94%) Frame = +3 Query: 6 VMVVGVPNVGKSALINAI 59 V++VG PNVGKS+L+NA+ Sbjct: 219 VVLVGAPNVGKSSLLNAL 236
>TRME_NEIMA (Q9JWB7) Probable tRNA modification GTPase trmE| Length = 448 Score = 30.4 bits (67), Expect = 4.6 Identities = 12/18 (66%), Positives = 17/18 (94%) Frame = +3 Query: 6 VMVVGVPNVGKSALINAI 59 V++VG PNVGKS+L+NA+ Sbjct: 219 VVLVGAPNVGKSSLLNAL 236
>PUR7_BRUSU (Q8G178) Phosphoribosylaminoimidazole-succinocarboxamide synthase| (EC 6.3.2.6) (SAICAR synthetase) Length = 254 Score = 30.4 bits (67), Expect = 4.6 Identities = 19/72 (26%), Positives = 32/72 (44%) Frame = +2 Query: 179 IYVLDTPGVLVPSIPDMETGLKLALTGAVKDSVVGEERIAKYLLSLLNIRKTPLHWERLL 358 +Y PG LV D T + V RI++++ + LN P H+ R L Sbjct: 15 LYEGPEPGTLVQFFKDDATAFNAKKHEVIDGKGVLNNRISEHIFTQLNRIGIPTHFIRRL 74 Query: 359 HRREEFDEEPDV 394 + RE+ +E ++ Sbjct: 75 NMREQLIKEVEI 86
>PUR7_BRUME (Q8YGN6) Phosphoribosylaminoimidazole-succinocarboxamide synthase| (EC 6.3.2.6) (SAICAR synthetase) Length = 254 Score = 30.4 bits (67), Expect = 4.6 Identities = 19/72 (26%), Positives = 32/72 (44%) Frame = +2 Query: 179 IYVLDTPGVLVPSIPDMETGLKLALTGAVKDSVVGEERIAKYLLSLLNIRKTPLHWERLL 358 +Y PG LV D T + V RI++++ + LN P H+ R L Sbjct: 15 LYEGPEPGTLVQFFKDDATAFNAKKHEVIDGKGVLNNRISEHIFTQLNRIGIPTHFIRRL 74 Query: 359 HRREEFDEEPDV 394 + RE+ +E ++ Sbjct: 75 NMREQLIKEVEI 86
>PUR71_RHILO (Q98NM8) Phosphoribosylaminoimidazole-succinocarboxamide synthase 1| (EC 6.3.2.6) (SAICAR synthetase 1) Length = 264 Score = 30.4 bits (67), Expect = 4.6 Identities = 19/72 (26%), Positives = 32/72 (44%) Frame = +2 Query: 179 IYVLDTPGVLVPSIPDMETGLKLALTGAVKDSVVGEERIAKYLLSLLNIRKTPLHWERLL 358 +Y PG L+ D T V V RI++++ + LN P H+ R L Sbjct: 15 LYEGPEPGTLIQFFKDDATAFNKKKHEVVDGKGVLNNRISEHIFNHLNRMGIPTHFIRRL 74 Query: 359 HRREEFDEEPDV 394 + RE+ +E ++ Sbjct: 75 NMREQLIKEVEI 86
>FEOB_HELPJ (Q9ZLF3) Ferrous iron transport protein B| Length = 642 Score = 30.4 bits (67), Expect = 4.6 Identities = 13/19 (68%), Positives = 17/19 (89%) Frame = +3 Query: 3 LVMVVGVPNVGKSALINAI 59 +V +VG PNVGKS+LINA+ Sbjct: 5 IVALVGQPNVGKSSLINAL 23
>ENGA_PROMA (Q7VDI8) GTP-binding protein engA| Length = 456 Score = 30.4 bits (67), Expect = 4.6 Identities = 15/30 (50%), Positives = 21/30 (70%) Frame = +3 Query: 6 VMVVGVPNVGKSALINAIHRIANSXISSER 95 V +VG PNVGKS+L+NAI + +S+ R Sbjct: 180 VAIVGRPNVGKSSLLNAICGEKRAIVSAIR 209
>TRME_CYACA (Q9TLX6) Probable tRNA modification GTPase trmE| Length = 465 Score = 30.4 bits (67), Expect = 4.6 Identities = 13/28 (46%), Positives = 21/28 (75%) Frame = +3 Query: 6 VMVVGVPNVGKSALINAIHRIANSXISS 89 V ++G PNVGKS+L+NAI + S +++ Sbjct: 224 VCIIGKPNVGKSSLLNAIAKRECSIVTN 251
>FRM4B_MOUSE (Q920B0) FERM domain-containing protein 4B (GRP1-binding protein| GRSP1) (Golgi-associated band 4.1-like protein) (GOBLIN) Length = 981 Score = 30.4 bits (67), Expect = 4.6 Identities = 16/38 (42%), Positives = 19/38 (50%) Frame = +1 Query: 175 EHLRA*YTRCSSAKHSRHGNRSKACSDRSCQRFGGWRG 288 EHLR Y R S K H ++ SDR QR G+ G Sbjct: 844 EHLRGWYQRASGQKDQGHSPQTSFDSDRGSQRCLGFAG 881
>ENGA_XANCP (Q8P979) GTP-binding protein engA| Length = 465 Score = 30.4 bits (67), Expect = 4.6 Identities = 13/30 (43%), Positives = 20/30 (66%) Frame = +3 Query: 3 LVMVVGVPNVGKSALINAIHRIANSXISSE 92 LV +VG PNVGKS + NA+ R ++ + + Sbjct: 4 LVALVGRPNVGKSTIFNALTRTRDALVHDQ 33
>ENGA_XANAC (Q8PKY6) GTP-binding protein engA| Length = 465 Score = 30.4 bits (67), Expect = 4.6 Identities = 13/30 (43%), Positives = 20/30 (66%) Frame = +3 Query: 3 LVMVVGVPNVGKSALINAIHRIANSXISSE 92 LV +VG PNVGKS + NA+ R ++ + + Sbjct: 4 LVALVGRPNVGKSTIFNALTRTRDALVHDQ 33
>TRME_UREPA (Q9PRC7) Probable tRNA modification GTPase trmE| Length = 438 Score = 30.0 bits (66), Expect = 6.1 Identities = 11/18 (61%), Positives = 16/18 (88%) Frame = +3 Query: 6 VMVVGVPNVGKSALINAI 59 V+++G PNVGKS L+NA+ Sbjct: 217 VLIIGKPNVGKSTLLNAL 234
>ENGA_MYCPE (Q8EWH6) GTP-binding protein engA| Length = 444 Score = 30.0 bits (66), Expect = 6.1 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = +3 Query: 6 VMVVGVPNVGKSALINAIHRIANSXISSE 92 V +VG PNVGKS L N I ++ S + + Sbjct: 4 VAIVGKPNVGKSTLFNRIIKVNKSIVDDK 32
>GNL1_MOUSE (P36916) Guanine nucleotide-binding protein-like 1 (GTP-binding| protein MMR1) Length = 430 Score = 26.6 bits (57), Expect(2) = 6.1 Identities = 10/15 (66%), Positives = 13/15 (86%) Frame = +3 Query: 15 VGVPNVGKSALINAI 59 +G PNVGKS+LIN + Sbjct: 189 IGFPNVGKSSLINGL 203 Score = 21.9 bits (45), Expect(2) = 6.1 Identities = 7/16 (43%), Positives = 12/16 (75%) Frame = +2 Query: 173 PSIYVLDTPGVLVPSI 220 PS+ + D PG++ PS+ Sbjct: 228 PSVKLCDCPGLIFPSL 243
>ENGA_PORGI (Q7MT48) GTP-binding protein engA| Length = 437 Score = 29.6 bits (65), Expect = 7.9 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = +3 Query: 3 LVMVVGVPNVGKSALINAIHRIANSXISSE 92 LV +VG PNVGKS L N + + + ++ E Sbjct: 4 LVAIVGRPNVGKSTLFNRLTQSRQAIVAEE 33
>ENGA_STRMU (Q8DS90) GTP-binding protein engA| Length = 436 Score = 29.6 bits (65), Expect = 7.9 Identities = 17/27 (62%), Positives = 18/27 (66%) Frame = +3 Query: 6 VMVVGVPNVGKSALINAIHRIANSXIS 86 V +VG PNVGKSAL N RIA IS Sbjct: 6 VAIVGRPNVGKSALFN---RIAGERIS 29
>ENGA_BORBU (O51461) GTP-binding protein engA| Length = 433 Score = 29.6 bits (65), Expect = 7.9 Identities = 13/18 (72%), Positives = 15/18 (83%) Frame = +3 Query: 6 VMVVGVPNVGKSALINAI 59 V++VG PNVGKSAL N I Sbjct: 7 VLIVGRPNVGKSALFNRI 24
>GATD_METKA (Q8TV84) Glutamyl-tRNA(Gln) amidotransferase subunit D (EC 6.3.5.-)| (Glu-ADT subunit D) Length = 458 Score = 29.6 bits (65), Expect = 7.9 Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 19/81 (23%) Frame = +2 Query: 209 VPSIPDMETGLKLAL-----TGAVKDSVVGEERI--------------AKYLLSLLNIRK 331 +P++ M TG +A TGAVK + EE + A+ +L LL+ Sbjct: 96 LPNVSVMSTGGTIACRVDYETGAVKPAFTAEELVGAVPELLDVINIVDARAVLDLLSENM 155 Query: 332 TPLHWERLLHRREEFDEEPDV 394 P HW ++ + +PDV Sbjct: 156 EPKHWMKIAEEVVDALSDPDV 176
>PUR71_AGRT5 (Q8UEB7) Phosphoribosylaminoimidazole-succinocarboxamide synthase 1| (EC 6.3.2.6) (SAICAR synthetase 1) Length = 254 Score = 29.6 bits (65), Expect = 7.9 Identities = 19/72 (26%), Positives = 31/72 (43%) Frame = +2 Query: 179 IYVLDTPGVLVPSIPDMETGLKLALTGAVKDSVVGEERIAKYLLSLLNIRKTPLHWERLL 358 +Y PG L+ D T + V RI +Y+ + LN P H+ R L Sbjct: 15 LYEGPEPGTLIQFFKDDATAFNKKKHEVIDGKGVLNNRICEYVFTHLNKIGIPTHFIRRL 74 Query: 359 HRREEFDEEPDV 394 + RE+ +E ++ Sbjct: 75 NMREQLIKEVEM 86
>TRME_SYNY3 (P73839) Probable tRNA modification GTPase trmE| Length = 456 Score = 29.6 bits (65), Expect = 7.9 Identities = 13/27 (48%), Positives = 19/27 (70%) Frame = +3 Query: 6 VMVVGVPNVGKSALINAIHRIANSXIS 86 V +VG PNVGKS+L+NA R + ++ Sbjct: 224 VAIVGQPNVGKSSLLNAWSRTDRAIVT 250
>TRME_CAMJE (Q9PNX9) Probable tRNA modification GTPase trmE| Length = 442 Score = 29.6 bits (65), Expect = 7.9 Identities = 12/27 (44%), Positives = 19/27 (70%) Frame = +3 Query: 6 VMVVGVPNVGKSALINAIHRIANSXIS 86 + +VG PNVGKS+L+NA+ + +S Sbjct: 217 IAIVGKPNVGKSSLLNALLSYERAIVS 243
>ENGA_SYNPX (Q7U8G2) GTP-binding protein engA| Length = 455 Score = 29.6 bits (65), Expect = 7.9 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = +3 Query: 3 LVMVVGVPNVGKSALINAIHRIANSXISSE 92 +V ++G PNVGKS L+N + R + + E Sbjct: 5 VVAIIGRPNVGKSTLVNRLCRSREAIVHDE 34
>NOG2_CRYGA (Q6TGJ8) Nucleolar GTP-binding protein 2| Length = 731 Score = 24.6 bits (52), Expect(2) = 9.6 Identities = 8/17 (47%), Positives = 13/17 (76%) Frame = +3 Query: 15 VGVPNVGKSALINAIHR 65 +G PN GKS++IN + + Sbjct: 344 IGYPNTGKSSIINTLKK 360 Score = 23.1 bits (48), Expect(2) = 9.6 Identities = 13/43 (30%), Positives = 20/43 (46%) Frame = +2 Query: 179 IYVLDTPGVLVPSIPDMETGLKLALTGAVKDSVVGEERIAKYL 307 IY++D PG++ S D +T L V++ E I L Sbjct: 385 IYLIDCPGIVPVSAKDSDTDTVLKGVVRVENLATPAEHIPALL 427
>NOG2_CRYNV (Q8J109) Nucleolar GTP-binding protein 2| Length = 720 Score = 24.6 bits (52), Expect(2) = 9.6 Identities = 8/17 (47%), Positives = 13/17 (76%) Frame = +3 Query: 15 VGVPNVGKSALINAIHR 65 +G PN GKS++IN + + Sbjct: 334 IGYPNTGKSSIINTLKK 350 Score = 23.1 bits (48), Expect(2) = 9.6 Identities = 13/43 (30%), Positives = 20/43 (46%) Frame = +2 Query: 179 IYVLDTPGVLVPSIPDMETGLKLALTGAVKDSVVGEERIAKYL 307 IY++D PG++ S D +T L V++ E I L Sbjct: 375 IYLIDCPGIVPVSAKDSDTDTVLKGVVRVENLATPAEHIPALL 417 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 90,229,334 Number of Sequences: 219361 Number of extensions: 1744744 Number of successful extensions: 5646 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 5337 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5642 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5995743495 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
