ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags1o03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK108044.1| Oryza sativa (japonica cultivar-group) cDNA clon... 357 3e-95
2gb|AC146522.2| Oryza sativa (japonica cultivar-group) chromosome... 135 2e-28
3dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 135 2e-28
4gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 135 2e-28
5ref|NM_180022.1| Arabidopsis thaliana GTP binding AT2G41670 mRNA... 68 4e-08
6gb|AY254472.1| Arabidopsis thaliana short integuments 2 (SIN2) m... 68 4e-08
7gb|BT000379.1| Arabidopsis thaliana unknown protein (At2g41670) ... 68 4e-08
8gb|AY099738.1| Arabidopsis thaliana unknown protein (At2g41670) ... 68 4e-08
9gb|AC002510.3| Arabidopsis thaliana chromosome 2 clone T32G6 map... 68 4e-08
10emb|BX820524.1|CNS0A8QD Arabidopsis thaliana Full-length cDNA Co... 56 1e-04
11ref|XM_462937.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.56
12gb|AC084767.11| Oryza sativa (japonica cultivar-group) chromosom... 44 0.56
13ref|NM_001005323.1| Homo sapiens olfactory receptor, family 5, s... 44 0.56
14gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 44 0.56
15gb|AC129212.4| Mus musculus BAC clone RP24-373G21 from chromosom... 44 0.56
16gb|AC008432.5| Homo sapiens chromosome 5 clone CTC-320C6, comple... 44 0.56
17dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.56
18gb|AC099736.10| Mus musculus chromosome 15, clone RP23-228F5, co... 44 0.56
19dbj|AP002826.2| Homo sapiens genomic DNA, chromosome 11q, clone:... 44 0.56
20dbj|AB065496.1| Homo sapiens gene for seven transmembrane helix ... 44 0.56
21ref|XM_521980.1| PREDICTED: Pan troglodytes similar to Olfactory... 42 2.2
22gb|AC121116.7| Mus musculus chromosome 8, clone RP23-267D22, com... 42 2.2
23gb|AY662342.1| Solanum tuberosum 9-cis-epoxy-carotenoid dioxygen... 42 2.2
24emb|AJ276244.1|STU276244 Solanum tuberosum mRNA for putative 9-c... 42 2.2
25dbj|AP001521.4| Homo sapiens genomic DNA, chromosome 11q clone:R... 42 2.2
26gb|AC004505.1| Homo sapiens chromosome 20, P1 clone 86C1 (LBNL H... 40 8.7
27gb|AC116812.10| Mus musculus chromosome 15, clone RP24-357G13, c... 40 8.7
28gb|AC147151.2| Pan troglodytes BAC clone CH251-205A10 from Y, co... 40 8.7
29gb|AC146458.3| Pan troglodytes BAC clone CH251-72D14 from Y, com... 40 8.7
30emb|BX276189.1| Human DNA sequence from clone RP4-678D15 on chro... 40 8.7
31emb|Z97348.1|PFMAL3P1 Plasmodium falciparum MAL3P1, complete seq... 40 8.7
32dbj|BS000581.1| Pan troglodytes chromosome Y clone:PTB-115D04, c... 40 8.7
33gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 40 8.7
34ref|XM_392550.2| PREDICTED: Apis mellifera similar to ENSANGP000... 40 8.7
35gb|AC017020.4|AC017020 Homo sapiens BAC clone RP11-185K15 from Y... 40 8.7
36emb|AL772215.8| Mouse DNA sequence from clone RP23-114N20 on chr... 40 8.7 
>dbj|AK108044.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-E01, full
           insert sequence
          Length = 1564

 Score =  357 bits (180), Expect = 3e-95
 Identities = 309/350 (88%), Gaps = 2/350 (0%)
 Strand = Plus / Plus

                                                                       
Query: 3   cttgttatggtagttggtgtccccaatgttggaaagtctgcactcattaatgccattcat 62
           ||||||||||| |||||||| ||||||||||| |||||||| ||||| ||| ||||||||
Sbjct: 540 cttgttatggttgttggtgttcccaatgttggcaagtctgccctcataaattccattcat 599

                                                                       
Query: 63  cgaattgccaattctagnatttccagtgaacgataagatcaagcgggctagagttggacc 122
            |||||| || |||| |  ||||||||| | ||||||| |||||| |||| ||| |||||
Sbjct: 600 agaattgtcacttctcgt-tttccagtgcaagataagaacaagcgagctacagtaggacc 658

                                                                       
Query: 123 tctgcctggnagttacacaagacattgcaggatataagattgcaagccaaccgagcattt 182
             |||||||  ||||| ||||| |||||||||||||||||| ||||||| ||||||||||
Sbjct: 659 attgcctggt-gttactcaagatattgcaggatataagatttcaagccagccgagcattt 717

                                                                       
Query: 183 acgtgcttgatacaccaggtgttctagtgccaagcattccagacatggaaacaggtctaa 242
           | || ||||||||||||||||||||||| |||||||||||||||||||| || ||| |||
Sbjct: 718 atgtacttgatacaccaggtgttctagtaccaagcattccagacatggagactggtttaa 777

                                                                       
Query: 243 agcttgctctgacaggagctgtcaaagattcggtggttggagaggagcgtatagccaaat 302
           ||||||||||||||||||| ||||| || || ||||||||||||||||||||||| ||||
Sbjct: 778 agcttgctctgacaggagccgtcaaggactctgtggttggagaggagcgtatagcgaaat 837

                                                             
Query: 303 atctattatctcttcttaatattagaaaaactcctctacactgggagcga 352
           || |||| ||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 838 atttattgtctcttcttaatattagaaaaacccctctacattgggagcga 887



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 136/167 (81%)
 Strand = Plus / Plus

                                                                        
Query: 455  gccttgtatgttcaggacctggtgatagaggtccagagaaccctgtgcagtacagccatg 514
            ||||| ||||| |||||| ||||||| |||||||||||||| || |||||||||   |||
Sbjct: 990  gccttatatgtacaggacatggtgatggaggtccagagaacactttgcagtacatttatg 1049

                                                                        
Query: 515  gaattcacaggcaatctcgatgaagataacgagctggaaagtctaattgactcgcagctt 574
            || ||| | | |||    || || || |||||||| ||||| || || ||||| ||||||
Sbjct: 1050 gacttcgcggacaacactgaggatgagaacgagcttgaaagcctgatagactcacagctt 1109

                                                           
Query: 575  gttgcccttcgaaaggtgttcagaataccccacaaaccgcttgatga 621
            || || ||||| ||||||||||| ||||| ||||||||| |||||||
Sbjct: 1110 gtcgctcttcgcaaggtgttcaggatacctcacaaaccgtttgatga 1156
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>gb|AC146522.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0039A07 map near 50283S, complete sequence
          Length = 158158

 Score =  135 bits (68), Expect = 2e-28
 Identities = 92/100 (92%)
 Strand = Plus / Plus

                                                                         
Query: 159   agattgcaagccaaccgagcatttacgtgcttgatacaccaggtgttctagtgccaagca 218
             ||||| ||||||| ||||||||||| || ||||||||||||||||||||||| |||||||
Sbjct: 54820 agatttcaagccagccgagcatttatgtacttgatacaccaggtgttctagtaccaagca 54879

                                                     
Query: 219   ttccagacatggaaacaggtctaaagcttgctctgacagg 258
             ||||||||||||| || ||| |||||||||||||||||||
Sbjct: 54880 ttccagacatggagactggtttaaagcttgctctgacagg 54919



 Score =  125 bits (63), Expect = 2e-25
 Identities = 90/99 (90%)
 Strand = Plus / Plus

                                                                         
Query: 254   acaggagctgtcaaagattcggtggttggagaggagcgtatagccaaatatctattatct 313
             |||||||| ||||| || || ||||||||||||||||||||||| |||||| |||| |||
Sbjct: 55125 acaggagccgtcaaggactctgtggttggagaggagcgtatagcgaaatatttattgtct 55184

                                                    
Query: 314   cttcttaatattagaaaaactcctctacactgggagcga 352
             |||||||||||||||||||| |||||||| |||||||||
Sbjct: 55185 cttcttaatattagaaaaacccctctacattgggagcga 55223



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 126/155 (81%)
 Strand = Plus / Plus

                                                                         
Query: 467   caggacctggtgatagaggtccagagaaccctgtgcagtacagccatggaattcacaggc 526
             |||||| ||||||| |||||||||||||| || |||||||||   ||||| ||| | | |
Sbjct: 57631 caggacatggtgatggaggtccagagaacactttgcagtacatttatggacttcgcggac 57690

                                                                         
Query: 527   aatctcgatgaagataacgagctggaaagtctaattgactcgcagcttgttgcccttcga 586
             ||    || || || |||||||| ||||| || || ||||| |||||||| || ||||| 
Sbjct: 57691 aacactgaggatgagaacgagcttgaaagcctgatagactcacagcttgtcgctcttcgc 57750

                                                
Query: 587   aaggtgttcagaataccccacaaaccgcttgatga 621
             ||||||||||| ||||| ||||||||| |||||||
Sbjct: 57751 aaggtgttcaggatacctcacaaaccgtttgatga 57785



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 60/67 (89%)
 Strand = Plus / Plus

                                                                         
Query: 3     cttgttatggtagttggtgtccccaatgttggaaagtctgcactcattaatgccattcat 62
             ||||||||||| |||||||| ||||||||||| |||||||| ||||| ||| ||||||||
Sbjct: 53842 cttgttatggttgttggtgttcccaatgttggcaagtctgccctcataaattccattcat 53901

                    
Query: 63    cgaattg 69
              ||||||
Sbjct: 53902 agaattg 53908



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 64/76 (84%), Gaps = 1/76 (1%)
 Strand = Plus / Plus

                                                                         
Query: 85    ccagtgaacgataagatcaagcgggctagagttggacctctgcctggnagttacacaaga 144
             |||||| | ||||||| |||||| |||| ||| |||||  |||||||  ||||| |||||
Sbjct: 54002 ccagtgcaagataagaacaagcgagctacagtaggaccattgcctggt-gttactcaaga 54060

                             
Query: 145   cattgcaggatataag 160
              |||||||||||||||
Sbjct: 54061 tattgcaggatataag 54076
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  135 bits (68), Expect = 2e-28
 Identities = 92/100 (92%)
 Strand = Plus / Plus

                                                                            
Query: 159      agattgcaagccaaccgagcatttacgtgcttgatacaccaggtgttctagtgccaagca 218
                ||||| ||||||| ||||||||||| || ||||||||||||||||||||||| |||||||
Sbjct: 14309208 agatttcaagccagccgagcatttatgtacttgatacaccaggtgttctagtaccaagca 14309267

                                                        
Query: 219      ttccagacatggaaacaggtctaaagcttgctctgacagg 258
                ||||||||||||| || ||| |||||||||||||||||||
Sbjct: 14309268 ttccagacatggagactggtttaaagcttgctctgacagg 14309307



 Score =  125 bits (63), Expect = 2e-25
 Identities = 90/99 (90%)
 Strand = Plus / Plus

                                                                            
Query: 254      acaggagctgtcaaagattcggtggttggagaggagcgtatagccaaatatctattatct 313
                |||||||| ||||| || || ||||||||||||||||||||||| |||||| |||| |||
Sbjct: 14309513 acaggagccgtcaaggactctgtggttggagaggagcgtatagcgaaatatttattgtct 14309572

                                                       
Query: 314      cttcttaatattagaaaaactcctctacactgggagcga 352
                |||||||||||||||||||| |||||||| |||||||||
Sbjct: 14309573 cttcttaatattagaaaaacccctctacattgggagcga 14309611



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 126/155 (81%)
 Strand = Plus / Plus

                                                                            
Query: 467      caggacctggtgatagaggtccagagaaccctgtgcagtacagccatggaattcacaggc 526
                |||||| ||||||| |||||||||||||| || |||||||||   ||||| ||| | | |
Sbjct: 14312019 caggacatggtgatggaggtccagagaacactttgcagtacatttatggacttcgcggac 14312078

                                                                            
Query: 527      aatctcgatgaagataacgagctggaaagtctaattgactcgcagcttgttgcccttcga 586
                ||    || || || |||||||| ||||| || || ||||| |||||||| || ||||| 
Sbjct: 14312079 aacactgaggatgagaacgagcttgaaagcctgatagactcacagcttgtcgctcttcgc 14312138

                                                   
Query: 587      aaggtgttcagaataccccacaaaccgcttgatga 621
                ||||||||||| ||||| ||||||||| |||||||
Sbjct: 14312139 aaggtgttcaggatacctcacaaaccgtttgatga 14312173



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 60/67 (89%)
 Strand = Plus / Plus

                                                                            
Query: 3        cttgttatggtagttggtgtccccaatgttggaaagtctgcactcattaatgccattcat 62
                ||||||||||| |||||||| ||||||||||| |||||||| ||||| ||| ||||||||
Sbjct: 14308230 cttgttatggttgttggtgttcccaatgttggcaagtctgccctcataaattccattcat 14308289

                       
Query: 63       cgaattg 69
                 ||||||
Sbjct: 14308290 agaattg 14308296



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 64/76 (84%), Gaps = 1/76 (1%)
 Strand = Plus / Plus

                                                                            
Query: 85       ccagtgaacgataagatcaagcgggctagagttggacctctgcctggnagttacacaaga 144
                |||||| | ||||||| |||||| |||| ||| |||||  |||||||  ||||| |||||
Sbjct: 14308390 ccagtgcaagataagaacaagcgagctacagtaggaccattgcctggt-gttactcaaga 14308448

                                
Query: 145      cattgcaggatataag 160
                 |||||||||||||||
Sbjct: 14308449 tattgcaggatataag 14308464
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  135 bits (68), Expect = 2e-28
 Identities = 92/100 (92%)
 Strand = Plus / Plus

                                                                            
Query: 159      agattgcaagccaaccgagcatttacgtgcttgatacaccaggtgttctagtgccaagca 218
                ||||| ||||||| ||||||||||| || ||||||||||||||||||||||| |||||||
Sbjct: 14391210 agatttcaagccagccgagcatttatgtacttgatacaccaggtgttctagtaccaagca 14391269

                                                        
Query: 219      ttccagacatggaaacaggtctaaagcttgctctgacagg 258
                ||||||||||||| || ||| |||||||||||||||||||
Sbjct: 14391270 ttccagacatggagactggtttaaagcttgctctgacagg 14391309



 Score =  125 bits (63), Expect = 2e-25
 Identities = 90/99 (90%)
 Strand = Plus / Plus

                                                                            
Query: 254      acaggagctgtcaaagattcggtggttggagaggagcgtatagccaaatatctattatct 313
                |||||||| ||||| || || ||||||||||||||||||||||| |||||| |||| |||
Sbjct: 14391515 acaggagccgtcaaggactctgtggttggagaggagcgtatagcgaaatatttattgtct 14391574

                                                       
Query: 314      cttcttaatattagaaaaactcctctacactgggagcga 352
                |||||||||||||||||||| |||||||| |||||||||
Sbjct: 14391575 cttcttaatattagaaaaacccctctacattgggagcga 14391613



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 126/155 (81%)
 Strand = Plus / Plus

                                                                            
Query: 467      caggacctggtgatagaggtccagagaaccctgtgcagtacagccatggaattcacaggc 526
                |||||| ||||||| |||||||||||||| || |||||||||   ||||| ||| | | |
Sbjct: 14394021 caggacatggtgatggaggtccagagaacactttgcagtacatttatggacttcgcggac 14394080

                                                                            
Query: 527      aatctcgatgaagataacgagctggaaagtctaattgactcgcagcttgttgcccttcga 586
                ||    || || || |||||||| ||||| || || ||||| |||||||| || ||||| 
Sbjct: 14394081 aacactgaggatgagaacgagcttgaaagcctgatagactcacagcttgtcgctcttcgc 14394140

                                                   
Query: 587      aaggtgttcagaataccccacaaaccgcttgatga 621
                ||||||||||| ||||| ||||||||| |||||||
Sbjct: 14394141 aaggtgttcaggatacctcacaaaccgtttgatga 14394175



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 60/67 (89%)
 Strand = Plus / Plus

                                                                            
Query: 3        cttgttatggtagttggtgtccccaatgttggaaagtctgcactcattaatgccattcat 62
                ||||||||||| |||||||| ||||||||||| |||||||| ||||| ||| ||||||||
Sbjct: 14390232 cttgttatggttgttggtgttcccaatgttggcaagtctgccctcataaattccattcat 14390291

                       
Query: 63       cgaattg 69
                 ||||||
Sbjct: 14390292 agaattg 14390298



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 64/76 (84%), Gaps = 1/76 (1%)
 Strand = Plus / Plus

                                                                            
Query: 85       ccagtgaacgataagatcaagcgggctagagttggacctctgcctggnagttacacaaga 144
                |||||| | ||||||| |||||| |||| ||| |||||  |||||||  ||||| |||||
Sbjct: 14390392 ccagtgcaagataagaacaagcgagctacagtaggaccattgcctggt-gttactcaaga 14390450

                                
Query: 145      cattgcaggatataag 160
                 |||||||||||||||
Sbjct: 14390451 tattgcaggatataag 14390466
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>ref|NM_180022.1| Arabidopsis thaliana GTP binding AT2G41670 mRNA, complete cds
          Length = 1257

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                             
Query: 3   cttgttatggtagttggtgtccccaatgttggaaagtctgcactcattaa 52
           ||||| ||||| ||||||||||||||||||||||| ||||| ||||||||
Sbjct: 447 cttgtaatggtggttggtgtccccaatgttggaaaatctgcgctcattaa 496
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>gb|AY254472.1| Arabidopsis thaliana short integuments 2 (SIN2) mRNA, complete cds
          Length = 1195

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                             
Query: 3   cttgttatggtagttggtgtccccaatgttggaaagtctgcactcattaa 52
           ||||| ||||| ||||||||||||||||||||||| ||||| ||||||||
Sbjct: 446 cttgtaatggtggttggtgtccccaatgttggaaaatctgcgctcattaa 495
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>gb|BT000379.1| Arabidopsis thaliana unknown protein (At2g41670) mRNA, complete cds
          Length = 1201

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                             
Query: 3   cttgttatggtagttggtgtccccaatgttggaaagtctgcactcattaa 52
           ||||| ||||| ||||||||||||||||||||||| ||||| ||||||||
Sbjct: 412 cttgtaatggtggttggtgtccccaatgttggaaaatctgcgctcattaa 461
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>gb|AY099738.1| Arabidopsis thaliana unknown protein (At2g41670) mRNA, complete cds
          Length = 1257

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                             
Query: 3   cttgttatggtagttggtgtccccaatgttggaaagtctgcactcattaa 52
           ||||| ||||| ||||||||||||||||||||||| ||||| ||||||||
Sbjct: 447 cttgtaatggtggttggtgtccccaatgttggaaaatctgcgctcattaa 496
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>gb|AC002510.3| Arabidopsis thaliana chromosome 2 clone T32G6 map CIC11C08, complete
             sequence
          Length = 91979

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                               
Query: 3     cttgttatggtagttggtgtccccaatgttggaaagtctgcactcattaa 52
             ||||| ||||| ||||||||||||||||||||||| ||||| ||||||||
Sbjct: 75753 cttgtaatggtggttggtgtccccaatgttggaaaatctgcgctcattaa 75802
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>emb|BX820524.1|CNS0A8QD Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH44ZC04 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1209

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                   
Query: 3   cttgttatggtagttggtgtccccaatgttggaaagtctg 42
           ||||| ||||| ||||||||||||||||||||||| ||||
Sbjct: 443 cttgtgatggtggttggtgtccccaatgttggaaaatctg 482
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>ref|XM_462937.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2064

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 3   cttgttatggtagttggtgtccccaa 28
           ||||||||||||| ||||||||||||
Sbjct: 247 cttgttatggtagatggtgtccccaa 272
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>gb|AC084767.11| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0057P11
             map R606A, complete sequence
          Length = 163580

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 3     cttgttatggtagttggtgtccccaa 28
             ||||||||||||| ||||||||||||
Sbjct: 67266 cttgttatggtagatggtgtccccaa 67241
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>ref|NM_001005323.1| Homo sapiens olfactory receptor, family 5, subfamily AK, member 2
           (OR5AK2), mRNA
          Length = 930

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 355 gcttcacagaagagaagaatttgatg 380
           ||||||||||||| ||||||||||||
Sbjct: 251 gcttcacagaagaaaagaatttgatg 276
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 3        cttgttatggtagttggtgtccccaa 28
                ||||||||||||| ||||||||||||
Sbjct: 20064747 cttgttatggtagatggtgtccccaa 20064772
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>gb|AC129212.4| Mus musculus BAC clone RP24-373G21 from chromosome 15, complete
             sequence
          Length = 174846

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 508   agccatggaattcacaggcaat 529
             ||||||||||||||||||||||
Sbjct: 27535 agccatggaattcacaggcaat 27556
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>gb|AC008432.5| Homo sapiens chromosome 5 clone CTC-320C6, complete sequence
          Length = 170216

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 215    agcattccagacatggaaacag 236
              ||||||||||||||||||||||
Sbjct: 101074 agcattccagacatggaaacag 101095
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 3        cttgttatggtagttggtgtccccaa 28
                ||||||||||||| ||||||||||||
Sbjct: 20057775 cttgttatggtagatggtgtccccaa 20057800
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>gb|AC099736.10| Mus musculus chromosome 15, clone RP23-228F5, complete sequence
          Length = 186137

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 508    agccatggaattcacaggcaat 529
              ||||||||||||||||||||||
Sbjct: 112450 agccatggaattcacaggcaat 112429
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>dbj|AP002826.2| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2373H22, complete
             sequences
          Length = 132228

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 355   gcttcacagaagagaagaatttgatg 380
             ||||||||||||| ||||||||||||
Sbjct: 86997 gcttcacagaagaaaagaatttgatg 87022
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>dbj|AB065496.1| Homo sapiens gene for seven transmembrane helix receptor, complete
           cds, isolate:CBRC7TM_59
          Length = 1330

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 355 gcttcacagaagagaagaatttgatg 380
           ||||||||||||| ||||||||||||
Sbjct: 451 gcttcacagaagaaaagaatttgatg 476
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>ref|XM_521980.1| PREDICTED: Pan troglodytes similar to Olfactory receptor 5AK2
           (LOC466581), mRNA
          Length = 930

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 355 gcttcacagaagagaagaatttgat 379
           ||||||||||||| |||||||||||
Sbjct: 251 gcttcacagaagaaaagaatttgat 275
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>gb|AC121116.7| Mus musculus chromosome 8, clone RP23-267D22, complete sequence
          Length = 200891

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 212    ccaagcattccagacatggaa 232
              |||||||||||||||||||||
Sbjct: 194553 ccaagcattccagacatggaa 194533
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>gb|AY662342.1| Solanum tuberosum 9-cis-epoxy-carotenoid dioxygenase 1 mRNA, complete
            cds
          Length = 2300

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 212  ccaagcattccagacatggaaacag 236
            |||||||||||||| ||||||||||
Sbjct: 1406 ccaagcattccagagatggaaacag 1382
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>emb|AJ276244.1|STU276244 Solanum tuberosum mRNA for putative 9-cis-epoxycarotenoid dioxygenase
            (nced1 gene)
          Length = 2164

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 212  ccaagcattccagacatggaaacag 236
            |||||||||||||| ||||||||||
Sbjct: 1332 ccaagcattccagagatggaaacag 1308
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>dbj|AP001521.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-644A8, complete
            sequences
          Length = 179098

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 355  gcttcacagaagagaagaatttgat 379
            ||||||||||||| |||||||||||
Sbjct: 6177 gcttcacagaagaaaagaatttgat 6201
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>gb|AC004505.1| Homo sapiens chromosome 20, P1 clone 86C1 (LBNL H65), complete sequence
          Length = 57493

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 271   ttcggtggttggagaggagc 290
             ||||||||||||||||||||
Sbjct: 55328 ttcggtggttggagaggagc 55309
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>gb|AC116812.10| Mus musculus chromosome 15, clone RP24-357G13, complete sequence
          Length = 183993

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 357   ttcacagaagagaagaattt 376
             ||||||||||||||||||||
Sbjct: 31662 ttcacagaagagaagaattt 31681
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>gb|AC147151.2| Pan troglodytes BAC clone CH251-205A10 from Y, complete sequence
          Length = 174629

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 114   agttggacctctgcctggnagtt 136
             |||||||||||||||||| ||||
Sbjct: 36039 agttggacctctgcctggtagtt 36017
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>gb|AC146458.3| Pan troglodytes BAC clone CH251-72D14 from Y, complete sequence
          Length = 150240

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 114   agttggacctctgcctggnagtt 136
             |||||||||||||||||| ||||
Sbjct: 96728 agttggacctctgcctggtagtt 96750
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>emb|BX276189.1| Human DNA sequence from clone RP4-678D15 on chromosome 20q13.13-13.2
             Contains part of the gene for a novel protein (FLJ33887),
             complete sequence
          Length = 54161

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 271   ttcggtggttggagaggagc 290
             ||||||||||||||||||||
Sbjct: 50095 ttcggtggttggagaggagc 50076
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>emb|Z97348.1|PFMAL3P1 Plasmodium falciparum MAL3P1, complete sequence
          Length = 65691

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 362   agaagagaagaatttgatga 381
             ||||||||||||||||||||
Sbjct: 58293 agaagagaagaatttgatga 58312
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>dbj|BS000581.1| Pan troglodytes chromosome Y clone:PTB-115D04, complete sequence
          Length = 190533

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 114    agttggacctctgcctggnagtt 136
              |||||||||||||||||| ||||
Sbjct: 135277 agttggacctctgcctggtagtt 135299
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>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                       
Query: 114      agttggacctctgcctggnagtt 136
                |||||||||||||||||| ||||
Sbjct: 21244674 agttggacctctgcctggtagtt 21244652
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>ref|XM_392550.2| PREDICTED: Apis mellifera similar to ENSANGP00000019435 (LOC409020),
            mRNA
          Length = 8601

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 419  tcactgcggaggaggcggcg 438
            ||||||||||||||||||||
Sbjct: 1124 tcactgcggaggaggcggcg 1143
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>gb|AC017020.4|AC017020 Homo sapiens BAC clone RP11-185K15 from Y, complete sequence
          Length = 166403

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 114   agttggacctctgcctggnagtt 136
             |||||||||||||||||| ||||
Sbjct: 92500 agttggacctctgcctggtagtt 92478
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>emb|AL772215.8| Mouse DNA sequence from clone RP23-114N20 on chromosome 2, complete
             sequence
          Length = 187537

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 541   taacgagctggaaagtctaa 560
             ||||||||||||||||||||
Sbjct: 15754 taacgagctggaaagtctaa 15735


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,081,048
Number of Sequences: 3902068
Number of extensions: 5081048
Number of successful extensions: 95444
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 95223
Number of HSP's gapped (non-prelim): 220
length of query: 640
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 617
effective length of database: 17,143,297,704
effective search space: 10577414683368
effective search space used: 10577414683368
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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