ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags1n23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_450159.1| Oryza sativa (japonica cultivar-group), mRNA 632 e-178
2dbj|AK101816.1| Oryza sativa (japonica cultivar-group) cDNA clon... 632 e-178
3dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 224 3e-55
4dbj|AP005583.3| Oryza sativa (japonica cultivar-group) genomic D... 224 3e-55
5ref|XM_476622.1| Oryza sativa (japonica cultivar-group), mRNA 64 6e-07
6ref|NM_102791.3| Arabidopsis thaliana ATPase AT1G30540 mRNA, com... 60 9e-06
7gb|BT006432.1| Arabidopsis thaliana At1g30540 gene, complete cds 60 9e-06
8emb|BX815240.1|CNS0ACZU Arabidopsis thaliana Full-length cDNA Co... 60 9e-06
9emb|BX817652.1|CNS0ACQV Arabidopsis thaliana Full-length cDNA Co... 60 9e-06
10gb|AY084324.1| Arabidopsis thaliana clone 103989 mRNA, complete ... 60 9e-06
11dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
12dbj|AP004263.4| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
13gb|AC009917.2|F26G16 Arabidopsis thaliana chromosome 1 BAC F26G1... 54 6e-04
14gb|AY486599.1| Hevea brasiliensis clone mHbCIRa463 microsatellit... 52 0.002
15emb|CT485797.2| Medicago truncatula chromosome 5 clone mth4-11a3... 44 0.54
16gb|AE017226.1| Treponema denticola ATCC 35405, complete genome 44 0.54
17ref|XM_800684.1| Trypanosoma cruzi strain CL Brener hypothetical... 42 2.1
18ref|XM_809261.1| Trypanosoma cruzi strain CL Brener hypothetical... 42 2.1
19ref|XM_343818.2| PREDICTED: Rattus norvegicus similar to AI44819... 42 2.1
20gb|U67927.1|TCU67927 Trypanosoma cruzi TC38 (tc38) mRNA, complet... 42 2.1
21dbj|AP006676.1| Lotus japonicus genomic DNA, chromosome 1, clone... 42 2.1
22gb|AC160873.4| Colobus guereza clone CH272-426J14, complete sequ... 40 8.5
23gb|AC012376.12| Drosophila melanogaster clone BACR48C12, complet... 40 8.5
24emb|CR848788.7| Zebrafish DNA sequence from clone DKEY-283B15 in... 40 8.5
25gb|BC031436.1| Mus musculus RIKEN cDNA 1300013J15 gene, mRNA (cD... 40 8.5
26emb|CR378664.1| Photobacterium profundum SS9; segment 2/12 40 8.5
27emb|AL592465.8| Mouse DNA sequence from clone RP23-36C4 on chrom... 40 8.5
28gb|AC107326.4| Drosophila melanogaster X BAC RP98-33A8 (Roswell ... 40 8.5
29gb|AC012295.20| Mus musculus chromosome 11, clone RP23-48A17, co... 40 8.5
30ref|NM_130576.2| Drosophila melanogaster CG3740-RA (CG3740), mRNA 40 8.5
31gb|AY070694.1| Drosophila melanogaster RH30069 full length cDNA 40 8.5
32ref|XM_677828.1| PREDICTED: Danio rerio similar to bullous pemph... 40 8.5
33dbj|AK009038.1| Mus musculus adult male tongue cDNA, RIKEN full-... 40 8.5
34gb|AC011071.12|AC011071 Drosophila melanogaster, chromosome X, r... 40 8.5
35dbj|AK004994.2| Mus musculus adult male liver cDNA, RIKEN full-l... 40 8.5
36ref|NM_026183.2| Mus musculus RIKEN cDNA 1300013J15 gene (130001... 40 8.5
37gb|AE003512.3| Drosophila melanogaster chromosome X, section 64 ... 40 8.5
38gb|AE003421.2| Drosophila melanogaster chromosome X, section 5 o... 40 8.5
39emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB1... 40 8.5
40emb|AL021726.1|DMC171E4 Drosophila melanogaster cosmid clone 171E4 40 8.5 
>ref|XM_450159.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1449

 Score =  632 bits (319), Expect = e-178
 Identities = 535/606 (88%), Gaps = 1/606 (0%)
 Strand = Plus / Plus

                                                                       
Query: 15  caggccctcacaatggccagcacagnatcgttctgctgttgttgcagtttgcttatctgt 74
           |||||||||||| ||| || ||| | ||||||| |||||   ||||||||| ||| ||||
Sbjct: 258 caggccctcacattggtcaacac-ggatcgttcagctgtccgtgcagtttgtttagctgt 316

                                                                       
Query: 75  atctggggtgaaccatccttcagatcagcagaggatgctggactggatctgcaacctatt 134
           |||||| || ||||||||||| ||||||||||||||||| ||||||||  |  | || ||
Sbjct: 317 atctggagttaaccatccttctgatcagcagaggatgctagactggattcgagatctctt 376

                                                                       
Query: 135 ccctggcaatgccaagttttatgtggaaaatgatgctgtagcggccttagccagtggtac 194
           ||||||| ||| |||||||||||||||||||||||| || || ||  | |||||||||||
Sbjct: 377 ccctggccatgtcaagttttatgtggaaaatgatgcggtggcagctctggccagtggtac 436

                                                                       
Query: 195 aatgggaaagctacacggctgtgtattgattgcgggcacaggaagcattgcttatggggt 254
           ||||||||||||||| |||||||||||||| |||||||| |||||||| |||||||||||
Sbjct: 437 aatgggaaagctacatggctgtgtattgatagcgggcactggaagcatagcttatggggt 496

                                                                       
Query: 255 caccgaagatggaaaagtagcgagagcagctggtgcaggtcctgttttaggcgactgggg 314
           ||| ||||||||||| ||||| |||||||||||||| || |||||||| |||||||||||
Sbjct: 497 cactgaagatggaaaggtagcaagagcagctggtgctggacctgttttgggcgactgggg 556

                                                                       
Query: 315 tagtggctatggcattgctgcacaggccctcacagcagtaataaaagcacatgatggccg 374
           |||||| ||||||||||||||||||||||| ||||||||  |||||||| | ||||||||
Sbjct: 557 tagtggatatggcattgctgcacaggccctgacagcagtcgtaaaagcatacgatggccg 616

                                                                       
Query: 375 tggaccacaaactaatcttacaagagagatcattaggaagcttgaaatctcttcaccaga 434
           |||||| || ||||||||||||||||||||| |||||||||||||  | |||||||||||
Sbjct: 617 tggacctcatactaatcttacaagagagatccttaggaagcttgagctttcttcaccaga 676

                                                                       
Query: 435 tgagttgattgggtgggcatatgcggatccatcttgggcccgtattgcagcccttgtacc 494
           ||| |||||||||||| | ||||| |||||||||||||||||||||||||| ||||| ||
Sbjct: 677 tgaattgattgggtggacgtatgcagatccatcttgggcccgtattgcagcacttgttcc 736

                                                                       
Query: 495 tgtggtggtatctgctgctgaagatggtgacaaagtagcaaacacgatactgcatgatgc 554
           ||| ||||||||| ||||||||||||||||  ||||||||||||  ||| |||||||| |
Sbjct: 737 tgttgtggtatcttctgctgaagatggtgatgaagtagcaaacaaaatattgcatgattc 796

                                                                       
Query: 555 agtgcaagagttggctgaaagcgttgtagctgttgttcggcgccttacattgtgtggtga 614
           |||||| ||||| ||||| || ||||| ||||||||||||||||||| ||||||||||||
Sbjct: 797 agtgcaggagttagctgatagtgttgttgctgttgttcggcgccttaaattgtgtggtga 856

                 
Query: 615 agatgg 620
           ||||||
Sbjct: 857 agatgg 862
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>dbj|AK101816.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033067C05, full
           insert sequence
          Length = 1449

 Score =  632 bits (319), Expect = e-178
 Identities = 535/606 (88%), Gaps = 1/606 (0%)
 Strand = Plus / Plus

                                                                       
Query: 15  caggccctcacaatggccagcacagnatcgttctgctgttgttgcagtttgcttatctgt 74
           |||||||||||| ||| || ||| | ||||||| |||||   ||||||||| ||| ||||
Sbjct: 258 caggccctcacattggtcaacac-ggatcgttcagctgtccgtgcagtttgtttagctgt 316

                                                                       
Query: 75  atctggggtgaaccatccttcagatcagcagaggatgctggactggatctgcaacctatt 134
           |||||| || ||||||||||| ||||||||||||||||| ||||||||  |  | || ||
Sbjct: 317 atctggagttaaccatccttctgatcagcagaggatgctagactggattcgagatctctt 376

                                                                       
Query: 135 ccctggcaatgccaagttttatgtggaaaatgatgctgtagcggccttagccagtggtac 194
           ||||||| ||| |||||||||||||||||||||||| || || ||  | |||||||||||
Sbjct: 377 ccctggccatgtcaagttttatgtggaaaatgatgcggtggcagctctggccagtggtac 436

                                                                       
Query: 195 aatgggaaagctacacggctgtgtattgattgcgggcacaggaagcattgcttatggggt 254
           ||||||||||||||| |||||||||||||| |||||||| |||||||| |||||||||||
Sbjct: 437 aatgggaaagctacatggctgtgtattgatagcgggcactggaagcatagcttatggggt 496

                                                                       
Query: 255 caccgaagatggaaaagtagcgagagcagctggtgcaggtcctgttttaggcgactgggg 314
           ||| ||||||||||| ||||| |||||||||||||| || |||||||| |||||||||||
Sbjct: 497 cactgaagatggaaaggtagcaagagcagctggtgctggacctgttttgggcgactgggg 556

                                                                       
Query: 315 tagtggctatggcattgctgcacaggccctcacagcagtaataaaagcacatgatggccg 374
           |||||| ||||||||||||||||||||||| ||||||||  |||||||| | ||||||||
Sbjct: 557 tagtggatatggcattgctgcacaggccctgacagcagtcgtaaaagcatacgatggccg 616

                                                                       
Query: 375 tggaccacaaactaatcttacaagagagatcattaggaagcttgaaatctcttcaccaga 434
           |||||| || ||||||||||||||||||||| |||||||||||||  | |||||||||||
Sbjct: 617 tggacctcatactaatcttacaagagagatccttaggaagcttgagctttcttcaccaga 676

                                                                       
Query: 435 tgagttgattgggtgggcatatgcggatccatcttgggcccgtattgcagcccttgtacc 494
           ||| |||||||||||| | ||||| |||||||||||||||||||||||||| ||||| ||
Sbjct: 677 tgaattgattgggtggacgtatgcagatccatcttgggcccgtattgcagcacttgttcc 736

                                                                       
Query: 495 tgtggtggtatctgctgctgaagatggtgacaaagtagcaaacacgatactgcatgatgc 554
           ||| ||||||||| ||||||||||||||||  ||||||||||||  ||| |||||||| |
Sbjct: 737 tgttgtggtatcttctgctgaagatggtgatgaagtagcaaacaaaatattgcatgattc 796

                                                                       
Query: 555 agtgcaagagttggctgaaagcgttgtagctgttgttcggcgccttacattgtgtggtga 614
           |||||| ||||| ||||| || ||||| ||||||||||||||||||| ||||||||||||
Sbjct: 797 agtgcaggagttagctgatagtgttgttgctgttgttcggcgccttaaattgtgtggtga 856

                 
Query: 615 agatgg 620
           ||||||
Sbjct: 857 agatgg 862
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score =  224 bits (113), Expect = 3e-55
 Identities = 167/185 (90%)
 Strand = Plus / Plus

                                                                           
Query: 133     ttccctggcaatgccaagttttatgtggaaaatgatgctgtagcggccttagccagtggt 192
               ||||||||| ||| |||||||||||||||||||||||| || || ||  | |||||||||
Sbjct: 2505272 ttccctggccatgtcaagttttatgtggaaaatgatgcggtggcagctctggccagtggt 2505331

                                                                           
Query: 193     acaatgggaaagctacacggctgtgtattgattgcgggcacaggaagcattgcttatggg 252
               ||||||||||||||||| |||||||||||||| |||||||| |||||||| |||||||||
Sbjct: 2505332 acaatgggaaagctacatggctgtgtattgatagcgggcactggaagcatagcttatggg 2505391

                                                                           
Query: 253     gtcaccgaagatggaaaagtagcgagagcagctggtgcaggtcctgttttaggcgactgg 312
               ||||| ||||||||||| ||||| |||||||||||||| || |||||||| |||||||||
Sbjct: 2505392 gtcactgaagatggaaaggtagcaagagcagctggtgctggacctgttttgggcgactgg 2505451

                    
Query: 313     ggtag 317
               |||||
Sbjct: 2505452 ggtag 2505456



 Score =  188 bits (95), Expect = 1e-44
 Identities = 146/163 (89%)
 Strand = Plus / Plus

                                                                           
Query: 454     tatgcggatccatcttgggcccgtattgcagcccttgtacctgtggtggtatctgctgct 513
               ||||| |||||||||||||||||||||||||| ||||| ||||| ||||||||| |||||
Sbjct: 2506375 tatgcagatccatcttgggcccgtattgcagcacttgttcctgttgtggtatcttctgct 2506434

                                                                           
Query: 514     gaagatggtgacaaagtagcaaacacgatactgcatgatgcagtgcaagagttggctgaa 573
               |||||||||||  ||||||||||||  ||| |||||||| ||||||| ||||| ||||| 
Sbjct: 2506435 gaagatggtgatgaagtagcaaacaaaatattgcatgattcagtgcaggagttagctgat 2506494

                                                          
Query: 574     agcgttgtagctgttgttcggcgccttacattgtgtggtgaag 616
               || ||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 2506495 agtgttgttgctgttgttcggcgccttaaattgtgtggtgaag 2506537



 Score =  161 bits (81), Expect = 3e-36
 Identities = 120/133 (90%)
 Strand = Plus / Plus

                                                                           
Query: 316     agtggctatggcattgctgcacaggccctcacagcagtaataaaagcacatgatggccgt 375
               ||||| ||||||||||||||||||||||| ||||||||  |||||||| | |||||||||
Sbjct: 2505876 agtggatatggcattgctgcacaggccctgacagcagtcgtaaaagcatacgatggccgt 2505935

                                                                           
Query: 376     ggaccacaaactaatcttacaagagagatcattaggaagcttgaaatctcttcaccagat 435
               ||||| || ||||||||||||||||||||| |||||||||||||  | ||||||||||||
Sbjct: 2505936 ggacctcatactaatcttacaagagagatccttaggaagcttgagctttcttcaccagat 2505995

                            
Query: 436     gagttgattgggt 448
               || ||||||||||
Sbjct: 2505996 gaattgattgggt 2506008



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 93/108 (86%), Gaps = 1/108 (0%)
 Strand = Plus / Plus

                                                                           
Query: 15      caggccctcacaatggccagcacagnatcgttctgctgttgttgcagtttgcttatctgt 74
               |||||||||||| ||| || ||| | ||||||| |||||   ||||||||| ||| ||||
Sbjct: 2504967 caggccctcacattggtcaacac-ggatcgttcagctgtccgtgcagtttgtttagctgt 2505025

                                                               
Query: 75      atctggggtgaaccatccttcagatcagcagaggatgctggactggat 122
               |||||| || ||||||||||| ||||||||||||||||| ||||||||
Sbjct: 2505026 atctggagttaaccatccttctgatcagcagaggatgctagactggat 2505073
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>dbj|AP005583.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0406E03
          Length = 201069

 Score =  224 bits (113), Expect = 3e-55
 Identities = 167/185 (90%)
 Strand = Plus / Plus

                                                                         
Query: 133   ttccctggcaatgccaagttttatgtggaaaatgatgctgtagcggccttagccagtggt 192
             ||||||||| ||| |||||||||||||||||||||||| || || ||  | |||||||||
Sbjct: 91862 ttccctggccatgtcaagttttatgtggaaaatgatgcggtggcagctctggccagtggt 91921

                                                                         
Query: 193   acaatgggaaagctacacggctgtgtattgattgcgggcacaggaagcattgcttatggg 252
             ||||||||||||||||| |||||||||||||| |||||||| |||||||| |||||||||
Sbjct: 91922 acaatgggaaagctacatggctgtgtattgatagcgggcactggaagcatagcttatggg 91981

                                                                         
Query: 253   gtcaccgaagatggaaaagtagcgagagcagctggtgcaggtcctgttttaggcgactgg 312
             ||||| ||||||||||| ||||| |||||||||||||| || |||||||| |||||||||
Sbjct: 91982 gtcactgaagatggaaaggtagcaagagcagctggtgctggacctgttttgggcgactgg 92041

                  
Query: 313   ggtag 317
             |||||
Sbjct: 92042 ggtag 92046



 Score =  188 bits (95), Expect = 1e-44
 Identities = 146/163 (89%)
 Strand = Plus / Plus

                                                                         
Query: 454   tatgcggatccatcttgggcccgtattgcagcccttgtacctgtggtggtatctgctgct 513
             ||||| |||||||||||||||||||||||||| ||||| ||||| ||||||||| |||||
Sbjct: 92965 tatgcagatccatcttgggcccgtattgcagcacttgttcctgttgtggtatcttctgct 93024

                                                                         
Query: 514   gaagatggtgacaaagtagcaaacacgatactgcatgatgcagtgcaagagttggctgaa 573
             |||||||||||  ||||||||||||  ||| |||||||| ||||||| ||||| ||||| 
Sbjct: 93025 gaagatggtgatgaagtagcaaacaaaatattgcatgattcagtgcaggagttagctgat 93084

                                                        
Query: 574   agcgttgtagctgttgttcggcgccttacattgtgtggtgaag 616
             || ||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 93085 agtgttgttgctgttgttcggcgccttaaattgtgtggtgaag 93127



 Score =  161 bits (81), Expect = 3e-36
 Identities = 120/133 (90%)
 Strand = Plus / Plus

                                                                         
Query: 316   agtggctatggcattgctgcacaggccctcacagcagtaataaaagcacatgatggccgt 375
             ||||| ||||||||||||||||||||||| ||||||||  |||||||| | |||||||||
Sbjct: 92466 agtggatatggcattgctgcacaggccctgacagcagtcgtaaaagcatacgatggccgt 92525

                                                                         
Query: 376   ggaccacaaactaatcttacaagagagatcattaggaagcttgaaatctcttcaccagat 435
             ||||| || ||||||||||||||||||||| |||||||||||||  | ||||||||||||
Sbjct: 92526 ggacctcatactaatcttacaagagagatccttaggaagcttgagctttcttcaccagat 92585

                          
Query: 436   gagttgattgggt 448
             || ||||||||||
Sbjct: 92586 gaattgattgggt 92598



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 93/108 (86%), Gaps = 1/108 (0%)
 Strand = Plus / Plus

                                                                         
Query: 15    caggccctcacaatggccagcacagnatcgttctgctgttgttgcagtttgcttatctgt 74
             |||||||||||| ||| || ||| | ||||||| |||||   ||||||||| ||| ||||
Sbjct: 91557 caggccctcacattggtcaacac-ggatcgttcagctgtccgtgcagtttgtttagctgt 91615

                                                             
Query: 75    atctggggtgaaccatccttcagatcagcagaggatgctggactggat 122
             |||||| || ||||||||||| ||||||||||||||||| ||||||||
Sbjct: 91616 atctggagttaaccatccttctgatcagcagaggatgctagactggat 91663
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>ref|XM_476622.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1059

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 152/192 (79%)
 Strand = Plus / Plus

                                                                       
Query: 163 aatgatgctgtagcggccttagccagtggtacaatgggaaagctacacggctgtgtattg 222
           |||||||| |||||||| ||||| ||||| || ||||||||||| || || ||||| |||
Sbjct: 391 aatgatgcggtagcggcattagcaagtggaaccatgggaaagctccatggatgtgtgttg 450

                                                                       
Query: 223 attgcgggcacaggaagcattgcttatggggtcaccgaagatggaaaagtagcgagagca 282
           || || || || || | ||| || |||||  |||||  |||||| | || ||| ||||||
Sbjct: 451 atcgcaggaactgggaccatagcctatggtttcaccagagatggcagagaagctagagca 510

                                                                       
Query: 283 gctggtgcaggtcctgttttaggcgactggggtagtggctatggcattgctgcacaggcc 342
           || |||||||| || ||| | || |||||||| ||||  ||||| ||| | |||||||| 
Sbjct: 511 gcaggtgcaggaccagttctgggtgactggggcagtgcatatgggatttcagcacaggca 570

                       
Query: 343 ctcacagcagta 354
            | |||||||||
Sbjct: 571 ttgacagcagta 582
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>ref|NM_102791.3| Arabidopsis thaliana ATPase AT1G30540 mRNA, complete cds
          Length = 1388

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 72/86 (83%)
 Strand = Plus / Plus

                                                                       
Query: 301 ttaggcgactggggtagtggctatggcattgctgcacaggccctcacagcagtaataaaa 360
           ||||| || ||||| ||||||||||| ||||||||||||||| | || || || || | |
Sbjct: 711 ttaggtgattggggaagtggctatggaattgctgcacaggccttaacggcggtgattaga 770

                                     
Query: 361 gcacatgatggccgtggaccacaaac 386
           || |||||||| ||||| ||||||||
Sbjct: 771 gctcatgatggtcgtggcccacaaac 796



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 163 aatgatgctgtagcggccttagccagtggtacaatgggaaagctacacggctg 215
           ||||||||| ||| ||| ||||| ||||| || ||||||||||| || |||||
Sbjct: 573 aatgatgctatagtggctttagctagtggaaccatgggaaagctccatggctg 625
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>gb|BT006432.1| Arabidopsis thaliana At1g30540 gene, complete cds
          Length = 1056

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 72/86 (83%)
 Strand = Plus / Plus

                                                                       
Query: 301 ttaggcgactggggtagtggctatggcattgctgcacaggccctcacagcagtaataaaa 360
           ||||| || ||||| ||||||||||| ||||||||||||||| | || || || || | |
Sbjct: 556 ttaggtgattggggaagtggctatggaattgctgcacaggccttaacggcggtgattaga 615

                                     
Query: 361 gcacatgatggccgtggaccacaaac 386
           || |||||||| ||||| ||||||||
Sbjct: 616 gctcatgatggtcgtggcccacaaac 641



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 163 aatgatgctgtagcggccttagccagtggtacaatgggaaagctacacggctg 215
           ||||||||| ||| ||| ||||| ||||| || ||||||||||| || |||||
Sbjct: 418 aatgatgctatagtggctttagctagtggaaccatgggaaagctccatggctg 470
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>emb|BX815240.1|CNS0ACZU Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS45ZD09 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1294

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 72/86 (83%)
 Strand = Plus / Plus

                                                                       
Query: 301 ttaggcgactggggtagtggctatggcattgctgcacaggccctcacagcagtaataaaa 360
           ||||| || ||||| ||||||||||| ||||||||||||||| | || || || || | |
Sbjct: 639 ttaggtgattggggaagtggctatggaattgctgcacaggccttaacggcggtgattaga 698

                                     
Query: 361 gcacatgatggccgtggaccacaaac 386
           || |||||||| ||||| ||||||||
Sbjct: 699 gctcatgatggtcgtggcccacaaac 724



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 163 aatgatgctgtagcggccttagccagtggtacaatgggaaagctacacggctg 215
           ||||||||| ||| ||| ||||| ||||| || ||||||||||| || |||||
Sbjct: 502 aatgatgctatagtggctttagctagtggaaccatgggaaagctccatggctg 554
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>emb|BX817652.1|CNS0ACQV Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL35ZD06 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1331

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 72/86 (83%)
 Strand = Plus / Plus

                                                                       
Query: 301 ttaggcgactggggtagtggctatggcattgctgcacaggccctcacagcagtaataaaa 360
           ||||| || ||||| ||||||||||| ||||||||||||||| | || || || || | |
Sbjct: 711 ttaggtgattggggaagtggctatggaattgctgcacaggccttaacggcggtgattaga 770

                                     
Query: 361 gcacatgatggccgtggaccacaaac 386
           || |||||||| ||||| ||||||||
Sbjct: 771 gctcatgatggtcgtggcccacaaac 796



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 163 aatgatgctgtagcggccttagccagtggtacaatgggaaagctacacggctg 215
           ||||||||| ||| ||| ||||| ||||| || ||||||||||| || |||||
Sbjct: 573 aatgatgctatagtggctttagctagtggaaccatgggaaagctccatggctg 625
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>gb|AY084324.1| Arabidopsis thaliana clone 103989 mRNA, complete sequence
          Length = 1232

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 72/86 (83%)
 Strand = Plus / Plus

                                                                       
Query: 301 ttaggcgactggggtagtggctatggcattgctgcacaggccctcacagcagtaataaaa 360
           ||||| || ||||| ||||||||||| ||||||||||||||| | || || || || | |
Sbjct: 672 ttaggtgattggggaagtggctatggaattgctgcacaggccttaacggcggtgattaga 731

                                     
Query: 361 gcacatgatggccgtggaccacaaac 386
           || |||||||| ||||| ||||||||
Sbjct: 732 gctcatgatggtcgtggcccacaaac 757



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 163 aatgatgctgtagcggccttagccagtggtacaatgggaaagctacacggctg 215
           ||||||||| ||| ||| ||||| ||||| || ||||||||||| || |||||
Sbjct: 534 aatgatgctatagtggctttagctagtggaaccatgggaaagctccatggctg 586
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 121/152 (79%)
 Strand = Plus / Plus

                                                                           
Query: 163     aatgatgctgtagcggccttagccagtggtacaatgggaaagctacacggctgtgtattg 222
               |||||||| |||||||| ||||| ||||| || ||||||||||| || || ||||| |||
Sbjct: 2498588 aatgatgcggtagcggcattagcaagtggaaccatgggaaagctccatggatgtgtgttg 2498647

                                                                           
Query: 223     attgcgggcacaggaagcattgcttatggggtcaccgaagatggaaaagtagcgagagca 282
               || || || || || | ||| || |||||  |||||  |||||| | || ||| ||||||
Sbjct: 2498648 atcgcaggaactgggaccatagcctatggtttcaccagagatggcagagaagctagagca 2498707

                                               
Query: 283     gctggtgcaggtcctgttttaggcgactgggg 314
               || |||||||| || ||| | || ||||||||
Sbjct: 2498708 gcaggtgcaggaccagttctgggtgactgggg 2498739
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>dbj|AP004263.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0022E03
          Length = 163032

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 121/152 (79%)
 Strand = Plus / Plus

                                                                         
Query: 163   aatgatgctgtagcggccttagccagtggtacaatgggaaagctacacggctgtgtattg 222
             |||||||| |||||||| ||||| ||||| || ||||||||||| || || ||||| |||
Sbjct: 63568 aatgatgcggtagcggcattagcaagtggaaccatgggaaagctccatggatgtgtgttg 63627

                                                                         
Query: 223   attgcgggcacaggaagcattgcttatggggtcaccgaagatggaaaagtagcgagagca 282
             || || || || || | ||| || |||||  |||||  |||||| | || ||| ||||||
Sbjct: 63628 atcgcaggaactgggaccatagcctatggtttcaccagagatggcagagaagctagagca 63687

                                             
Query: 283   gctggtgcaggtcctgttttaggcgactgggg 314
             || |||||||| || ||| | || ||||||||
Sbjct: 63688 gcaggtgcaggaccagttctgggtgactgggg 63719
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>gb|AC009917.2|F26G16 Arabidopsis thaliana chromosome 1 BAC F26G16 sequence, complete
             sequence
          Length = 75799

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 60/71 (84%)
 Strand = Plus / Minus

                                                                         
Query: 316   agtggctatggcattgctgcacaggccctcacagcagtaataaaagcacatgatggccgt 375
             ||||||||||| ||||||||||||||| | || || || || | ||| |||||||| |||
Sbjct: 68653 agtggctatggaattgctgcacaggccttaacggcggtgattagagctcatgatggtcgt 68594

                        
Query: 376   ggaccacaaac 386
             || ||||||||
Sbjct: 68593 ggcccacaaac 68583



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                  
Query: 163   aatgatgctgtagcggccttagccagtggtacaatgggaaagctacacggctg 215
             ||||||||| ||| ||| ||||| ||||| || ||||||||||| || |||||
Sbjct: 69111 aatgatgctatagtggctttagctagtggaaccatgggaaagctccatggctg 69059
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>gb|AY486599.1| Hevea brasiliensis clone mHbCIRa463 microsatellite sequence
          Length = 513

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 86/106 (81%)
 Strand = Plus / Minus

                                                                       
Query: 161 aaaatgatgctgtagcggccttagccagtggtacaatgggaaagctacacggctgtgtat 220
           ||||||||||||| || || || || ||||| |||||||||||||| || ||||| || |
Sbjct: 474 aaaatgatgctgtggcagcattggcaagtggaacaatgggaaagcttcatggctgcgttt 415

                                                         
Query: 221 tgattgcgggcacaggaagcattgcttatggggtcaccgaagatgg 266
           | ||||| || || || |  |||||||||||  |||| ||||||||
Sbjct: 414 taattgctggtacgggcactattgcttatggattcacagaagatgg 369
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>emb|CT485797.2| Medicago truncatula chromosome 5 clone mth4-11a3, COMPLETE SEQUENCE
          Length = 211224

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 460    gatccatcttgggcccgtattgcagc 485
              ||||||||||||||||| ||||||||
Sbjct: 153734 gatccatcttgggcccgcattgcagc 153759
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>gb|AE017226.1| Treponema denticola ATCC 35405, complete genome
          Length = 2843201

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 479     ttgcagcccttgtacctgtggtggta 504
               ||||||||||||| ||||||||||||
Sbjct: 2460515 ttgcagcccttgtgcctgtggtggta 2460490
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>ref|XM_800684.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053503833.50) partial mRNA
          Length = 1014

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 155 atgtggaaaatgatgctgtag 175
           |||||||||||||||||||||
Sbjct: 332 atgtggaaaatgatgctgtag 352
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>ref|XM_809261.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053511287.110) partial mRNA
          Length = 1014

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 155 atgtggaaaatgatgctgtag 175
           |||||||||||||||||||||
Sbjct: 332 atgtggaaaatgatgctgtag 352
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>ref|XM_343818.2| PREDICTED: Rattus norvegicus similar to AI448196 protein (LOC363495),
            mRNA
          Length = 6755

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 105  gaggatgctggactggatctg 125
            |||||||||||||||||||||
Sbjct: 4087 gaggatgctggactggatctg 4107
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>gb|U67927.1|TCU67927 Trypanosoma cruzi TC38 (tc38) mRNA, complete cds
          Length = 1014

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 155 atgtggaaaatgatgctgtag 175
           |||||||||||||||||||||
Sbjct: 332 atgtggaaaatgatgctgtag 352
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>dbj|AP006676.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT46E19, TM0371a,
             complete sequence
          Length = 46189

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 365   atgatggccgtggaccacaaa 385
             |||||||||||||||||||||
Sbjct: 40907 atgatggccgtggaccacaaa 40887
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>gb|AC160873.4| Colobus guereza clone CH272-426J14, complete sequence
          Length = 196315

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 86    accatccttcagatcagcag 105
             ||||||||||||||||||||
Sbjct: 42174 accatccttcagatcagcag 42193
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>gb|AC012376.12| Drosophila melanogaster clone BACR48C12, complete sequence
          Length = 183048

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 47     ctgctgttgttgcagtttgc 66
              ||||||||||||||||||||
Sbjct: 165325 ctgctgttgttgcagtttgc 165306
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>emb|CR848788.7| Zebrafish DNA sequence from clone DKEY-283B15 in linkage group 16,
              complete sequence
          Length = 189441

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 103    cagaggatgctggactggatctgc 126
              |||||||| |||||||||||||||
Sbjct: 105868 cagaggattctggactggatctgc 105891
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>gb|BC031436.1| Mus musculus RIKEN cDNA 1300013J15 gene, mRNA (cDNA clone MGC:28678
            IMAGE:4238749), complete cds
          Length = 2629

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 487  cttgtacctgtggtggtatc 506
            ||||||||||||||||||||
Sbjct: 1187 cttgtacctgtggtggtatc 1206
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>emb|CR378664.1| Photobacterium profundum SS9; segment 2/12
          Length = 347994

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 544    ctgcatgatgcagtgcaagagttggctg 571
              |||||||||||| |||||| ||||||||
Sbjct: 202065 ctgcatgatgcaatgcaagcgttggctg 202092
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>emb|AL592465.8| Mouse DNA sequence from clone RP23-36C4 on chromosome 11 Contains the
             Tbx4 gene for T-box 4, a ribosomal protein L21 (Rpl21)
             pseudogene and the 3' end of the Brip1 gene for BRCA1
             interacting protein C-terminal helicase 1, complete
             sequence
          Length = 238358

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 516   agatggtgacaaagtagcaa 535
             ||||||||||||||||||||
Sbjct: 17702 agatggtgacaaagtagcaa 17721
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>gb|AC107326.4| Drosophila melanogaster X BAC RP98-33A8 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 177096

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 273    agcgagagcagctggtgcag 292
              ||||||||||||||||||||
Sbjct: 145038 agcgagagcagctggtgcag 145019
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>gb|AC012295.20| Mus musculus chromosome 11, clone RP23-48A17, complete sequence
          Length = 187364

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 516   agatggtgacaaagtagcaa 535
             ||||||||||||||||||||
Sbjct: 71146 agatggtgacaaagtagcaa 71165
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>ref|NM_130576.2| Drosophila melanogaster CG3740-RA (CG3740), mRNA
          Length = 1217

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 273 agcgagagcagctggtgcag 292
           ||||||||||||||||||||
Sbjct: 524 agcgagagcagctggtgcag 543
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>gb|AY070694.1| Drosophila melanogaster RH30069 full length cDNA
          Length = 828

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 273 agcgagagcagctggtgcag 292
           ||||||||||||||||||||
Sbjct: 525 agcgagagcagctggtgcag 544
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>ref|XM_677828.1| PREDICTED: Danio rerio similar to bullous pemphigoid antigen 1,
           230/240kDa (LOC555337), mRNA
          Length = 1125

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 103 cagaggatgctggactggatctgc 126
           |||||||| |||||||||||||||
Sbjct: 589 cagaggattctggactggatctgc 612
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>dbj|AK009038.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched
           library, clone:2300007E21 product:hypothetical
           Uncharacterized domain UPF0013 containing protein, full
           insert sequence
          Length = 2247

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 487 cttgtacctgtggtggtatc 506
           ||||||||||||||||||||
Sbjct: 823 cttgtacctgtggtggtatc 842
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>gb|AC011071.12|AC011071 Drosophila melanogaster, chromosome X, region 18C-18D, BAC clone
             BACR27L16, complete sequence
          Length = 182623

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 47    ctgctgttgttgcagtttgc 66
             ||||||||||||||||||||
Sbjct: 26279 ctgctgttgttgcagtttgc 26260
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>dbj|AK004994.2| Mus musculus adult male liver cDNA, RIKEN full-length enriched
            library, clone:1300013J15 product:hypothetical protein,
            full insert sequence
          Length = 2990

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 487  cttgtacctgtggtggtatc 506
            ||||||||||||||||||||
Sbjct: 1559 cttgtacctgtggtggtatc 1578
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>ref|NM_026183.2| Mus musculus RIKEN cDNA 1300013J15 gene (1300013J15Rik), mRNA
          Length = 2990

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 487  cttgtacctgtggtggtatc 506
            ||||||||||||||||||||
Sbjct: 1559 cttgtacctgtggtggtatc 1578
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>gb|AE003512.3| Drosophila melanogaster chromosome X, section 64 of 74 of the complete
             sequence
          Length = 346474

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 47    ctgctgttgttgcagtttgc 66
             ||||||||||||||||||||
Sbjct: 70525 ctgctgttgttgcagtttgc 70506
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>gb|AE003421.2| Drosophila melanogaster chromosome X, section 5 of 74 of the complete
              sequence
          Length = 304204

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 273    agcgagagcagctggtgcag 292
              ||||||||||||||||||||
Sbjct: 207348 agcgagagcagctggtgcag 207329
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>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica
          Length = 3633272

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 249     tggggtcaccgaagatggaa 268
               ||||||||||||||||||||
Sbjct: 2135602 tggggtcaccgaagatggaa 2135621
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>emb|AL021726.1|DMC171E4 Drosophila melanogaster cosmid clone 171E4
          Length = 17487

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 273  agcgagagcagctggtgcag 292
            ||||||||||||||||||||
Sbjct: 6141 agcgagagcagctggtgcag 6122


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,291,451
Number of Sequences: 3902068
Number of extensions: 5291451
Number of successful extensions: 106314
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 106124
Number of HSP's gapped (non-prelim): 188
length of query: 621
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 598
effective length of database: 17,143,297,704
effective search space: 10251692026992
effective search space used: 10251692026992
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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