| Clone Name | bags1m19 |
|---|---|
| Clone Library Name | barley_pub |
>emb|BX511234.7| Zebrafish DNA sequence from clone DKEY-96I8 in linkage group 10, complete sequence Length = 112069 Score = 42.1 bits (21), Expect = 0.30 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 cttgcccatttatcagtctat 39 ||||||||||||||||||||| Sbjct: 20332 cttgcccatttatcagtctat 20352
>gb|AC167972.3| Mus musculus BAC clone RP24-73H24 from chromosome 13, complete sequence Length = 224330 Score = 40.1 bits (20), Expect = 1.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 tggtaccagctgttcctacttata 62 ||||||||||||||||| |||||| Sbjct: 74366 tggtaccagctgttcctccttata 74389
>gb|AC154413.3| Mus musculus BAC clone RP24-230J5 from chromosome 13, complete sequence Length = 174730 Score = 40.1 bits (20), Expect = 1.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 tggtaccagctgttcctacttata 62 ||||||||||||||||| |||||| Sbjct: 9579 tggtaccagctgttcctccttata 9556
>dbj|AK051610.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130059P19 product:inferred: Mus musculus, Similar to hypothetical protein DKFZp761J139, clone MGC:11924 IMAGE:3599595, mRNA, complete cds, full insert sequence Length = 3423 Score = 40.1 bits (20), Expect = 1.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 tggtaccagctgttcctacttata 62 ||||||||||||||||| |||||| Sbjct: 2442 tggtaccagctgttcctccttata 2419
>gb|AC119969.15| Mus musculus chromosome 7, clone RP24-474K16, complete sequence Length = 145231 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 57 cttataacaccccaaaatg 75 ||||||||||||||||||| Sbjct: 116304 cttataacaccccaaaatg 116286
>gb|AC146435.3| Pan troglodytes BAC clone RP43-15P23 from 7, complete sequence Length = 192805 Score = 38.2 bits (19), Expect = 4.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 71 aaatgttcaggagagctattgct 93 |||||||||||||||| |||||| Sbjct: 184010 aaatgttcaggagagcaattgct 183988
>gb|AC147331.3| Pan troglodytes BAC clone RP43-10H17 from 7, complete sequence Length = 189220 Score = 38.2 bits (19), Expect = 4.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 71 aaatgttcaggagagctattgct 93 |||||||||||||||| |||||| Sbjct: 148457 aaatgttcaggagagcaattgct 148435
>gb|AC153926.10| Mus musculus 10 BAC RP23-68M7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 191655 Score = 38.2 bits (19), Expect = 4.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 72 aatgttcaggagagctattgctg 94 |||||||||||||| |||||||| Sbjct: 57770 aatgttcaggagaggtattgctg 57792
>dbj|AB229198.1| Aspergillus oryzae cDNA, contig sequence: AoEST6077 Length = 372 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 42 taccagctgttcctactta 60 ||||||||||||||||||| Sbjct: 113 taccagctgttcctactta 131
>dbj|AP007166.1| Aspergillus oryzae RIB40 genomic DNA, SC113 Length = 1841713 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 42 taccagctgttcctactta 60 ||||||||||||||||||| Sbjct: 923988 taccagctgttcctactta 923970
>gb|AC158604.5| Mus musculus 10 BAC RP23-130B2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 190024 Score = 38.2 bits (19), Expect = 4.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 72 aatgttcaggagagctattgctg 94 |||||||||||||| |||||||| Sbjct: 176918 aatgttcaggagaggtattgctg 176940
>emb|BX255965.12| Zebrafish DNA sequence from clone CH211-270C19, complete sequence Length = 148298 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 69 caaaatgttcaggagagct 87 ||||||||||||||||||| Sbjct: 100716 caaaatgttcaggagagct 100734
>gb|AC073200.6| Homo sapiens BAC clone RP11-261L16 from 7, complete sequence Length = 165929 Score = 38.2 bits (19), Expect = 4.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 71 aaatgttcaggagagctattgct 93 |||||||||||||||| |||||| Sbjct: 50094 aaatgttcaggagagcaattgct 50072
>emb|CR386077.1| Gallus gallus finished cDNA, clone ChEST1035k6 Length = 759 Score = 38.2 bits (19), Expect = 4.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 64 caccccaaaatgttcaggagagc 86 ||||||||||||||||| ||||| Sbjct: 9 caccccaaaatgttcagcagagc 31
>emb|AL663100.12| Human DNA sequence from clone RP5-1052J3 on chromosome 1, complete sequence Length = 80421 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 63 acaccccaaaatgttcagg 81 ||||||||||||||||||| Sbjct: 10118 acaccccaaaatgttcagg 10100 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 728,519 Number of Sequences: 3902068 Number of extensions: 728519 Number of successful extensions: 46668 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 15 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 46641 Number of HSP's gapped (non-prelim): 27 length of query: 104 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 83 effective length of database: 17,151,101,840 effective search space: 1423541452720 effective search space used: 1423541452720 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)