ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags1m12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_506318.1| PREDICTED Oryza sativa (japonica cultivar-group... 434 e-118
2dbj|AK069799.1| Oryza sativa (japonica cultivar-group) cDNA clon... 434 e-118
3dbj|AK067140.1| Oryza sativa (japonica cultivar-group) cDNA clon... 434 e-118
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 167 5e-38
5dbj|AP005188.5| Oryza sativa (japonica cultivar-group) genomic D... 167 5e-38
6dbj|AP003916.2| Oryza sativa (japonica cultivar-group) genomic D... 167 5e-38
7ref|NM_118677.2| Arabidopsis thaliana ATNAP8; ATPase, coupled to... 50 0.008
8ref|NM_001036637.1| Arabidopsis thaliana ATNAP8 AT4G25450 (ATNAP... 50 0.008
9emb|AL079350.1|ATT30C3 Arabidopsis thaliana DNA chromosome 4, BA... 50 0.008
10emb|AL161563.2|ATCHRIV63 Arabidopsis thaliana DNA chromosome 4, ... 50 0.008
11emb|AL022197.2|ATM7J2 Arabidopsis thaliana DNA chromosome 4, P1 ... 50 0.008
12gb|AY094470.1| Arabidopsis thaliana At4g25450/M7J2_180 mRNA, com... 50 0.008
13dbj|AK220751.1| Arabidopsis thaliana mRNA for putative protein, ... 50 0.008
14dbj|AK176612.1| Arabidopsis thaliana mRNA, partial cds, clone: R... 50 0.008
15dbj|AK176118.1| Arabidopsis thaliana mRNA for putative protein, ... 50 0.008
16dbj|AK176078.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 50 0.008
17dbj|AK175939.1| Arabidopsis thaliana mRNA for putative protein, ... 50 0.008
18dbj|AK175486.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 50 0.008
19dbj|AK175416.1| Arabidopsis thaliana mRNA, partial cds, clone: R... 50 0.008
20dbj|AK175205.1| Arabidopsis thaliana mRNA, partial cds, clone: R... 50 0.008
21emb|AL138837.12| Human DNA sequence from clone RP1-149P10 on chr... 44 0.48
22dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete ge... 44 0.48
23gb|AC154294.2| Mus musculus BAC clone RP23-431B18 from 16, compl... 44 0.48
24gb|AE006047.1| Pasteurella multocida subsp. multocida str. Pm70 ... 42 1.9
25emb|AL158821.16| Human DNA sequence from clone RP1-75H8 on chrom... 42 1.9
26gb|AC108066.3| Homo sapiens BAC clone RP11-521H5 from 2, complet... 42 1.9
27dbj|AB065043.1| Silene vulgaris Ty1-copia type retrotransposon V... 42 1.9
28dbj|AB065012.1| Silene nutans Ty1-copia type retrotransposon NUR... 42 1.9
29gb|AC109509.20| Mus musculus chromosome 14, clone RP23-16M15, co... 40 7.5
30gb|AC096338.17| Rattus norvegicus X BAC CH230-95I19 (Children's ... 40 7.5
31gb|AC153972.6| Mus musculus 10 BAC RP24-383P4 (Roswell Park Canc... 40 7.5
32ref|XM_982303.1| PREDICTED: Mus musculus collagen-like tail subu... 40 7.5
33ref|XM_356716.5| PREDICTED: Mus musculus collagen-like tail subu... 40 7.5
34emb|AL357522.10| Human DNA sequence from clone RP11-685G11 on ch... 40 7.5
35emb|X53419.1|MMGGLINE M.mulatta gamma-globin-1(G), gamma-globin-... 40 7.5
36gb|AC164436.2| Mus musculus BAC clone RP23-134C5 from chromosome... 40 7.5
37emb|BX469903.9| Zebrafish DNA sequence from clone CH211-46H12 in... 40 7.5
38dbj|AK134212.1| Mus musculus adult male thymus cDNA, RIKEN full-... 40 7.5
39gb|AC092417.2| Homo sapiens chromosome 3 clone RP11-90M23, compl... 40 7.5
40emb|BX470178.13| Zebrafish DNA sequence from clone CH211-285K18,... 40 7.5
41ref|XM_624684.1| PREDICTED: Apis mellifera similar to Pcnx prote... 40 7.5
42gb|AC140200.4| Mus musculus BAC clone RP23-263K2 from 14, comple... 40 7.5
43emb|BX294130.5| Zebrafish DNA sequence from clone DKEY-263O22 in... 40 7.5
44dbj|AP006193.1| Homo sapiens genomic DNA, chromosome 3, clone:RP... 40 7.5
45gb|AC004069.1|AC004069 Homo sapiens chromosome 4 clone B71M12 ma... 40 7.5
46dbj|AP000500.1| Homo sapiens genomic DNA, chromosome 3p21.3, clo... 40 7.5
47dbj|AB026899.1| Homo sapiens DNA, DLEC1 to ORCTL4 gene region, s... 40 7.5 
>ref|XM_506318.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1634_H04.139
            patrial mRNA
          Length = 1836

 Score =  434 bits (219), Expect = e-118
 Identities = 351/395 (88%)
 Strand = Plus / Plus

                                                                        
Query: 162  agtgcatgaaaagggcactgttaacacacattacatgtcagcactgaaatcttcaagcag 221
            |||||| ||||| ||||||| ||||| |||||||||||||||||| ||||| ||||||||
Sbjct: 1248 agtgcacgaaaatggcactgctaacaaacattacatgtcagcactaaaatcatcaagcag 1307

                                                                        
Query: 222  ctgtagtgatctagcctggtctggagacattcacctggaagatgttcatttctcctatcc 281
            ||||||| |||| ||||||||||| ||||||||||| |||| ||| || || || || ||
Sbjct: 1308 ctgtagtaatcttgcctggtctggtgacattcacctagaaggtgtccacttttcttaccc 1367

                                                                        
Query: 282  actgagatctgatgtggatgtcttaaatgggcttgatcttgtaattgagtgtggaaaagt 341
            ||||||||||||||||||  ||||||||||||||||||||  |||||||||||||||| |
Sbjct: 1368 actgagatctgatgtggagatcttaaatgggcttgatcttacaattgagtgtggaaaaat 1427

                                                                        
Query: 342  cacagcacttgttggctctagtggtgctggaaaaagcactgtggtgcaacttttagcgcg 401
             ||||||||||||||  |||||||||||||||||||||| |||||||||||| | || ||
Sbjct: 1428 tacagcacttgttggacctagtggtgctggaaaaagcacagtggtgcaacttcttgcacg 1487

                                                                        
Query: 402  gtactatgagcctactcaaggccgcatcacggtggcaggggaagacattcgtgtatttga 461
            |||||||||||| ||||| || |||||||| ||||| ||||||||||| |||||||||||
Sbjct: 1488 gtactatgagccaactcatggtcgcatcactgtggctggggaagacatccgtgtatttga 1547

                                                                        
Query: 462  taaaagagaatggtttcaaattgtatccctagtgaatcaggaccctgtcctattctcggc 521
            |||||||||||||| || | |||||||| |||||||||||||||||||||||||||| | 
Sbjct: 1548 taaaagagaatggtctcgagttgtatccttagtgaatcaggaccctgtcctattctcagt 1607

                                               
Query: 522  atctgttggggaaaacattgcttatggtcttccgg 556
             ||||| || |||||||| ||||||||||||||||
Sbjct: 1608 ttctgtcggagaaaacatcgcttatggtcttccgg 1642



 Score =  125 bits (63), Expect = 2e-25
 Identities = 94/102 (92%), Gaps = 2/102 (1%)
 Strand = Plus / Plus

                                                                        
Query: 27   gtgatctgcgtgggnacatttgcttctatagagnagaataaattctgttctgtcagcaaa 86
            ||||||| |||||| |||||||||||| ||||  |||||||||||| |||| |||||| |
Sbjct: 1130 gtgatctacgtggg-acatttgcttctgtaga-aagaataaattctattctatcagcaga 1187

                                                      
Query: 87   ggacattgatgattcacttgcatatggtttagccaaagaact 128
            ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1188 ggacattgatgattcacttgcatatggtttagccaaagaact 1229
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>dbj|AK069799.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030H03, full
            insert sequence
          Length = 2320

 Score =  434 bits (219), Expect = e-118
 Identities = 351/395 (88%)
 Strand = Plus / Plus

                                                                        
Query: 162  agtgcatgaaaagggcactgttaacacacattacatgtcagcactgaaatcttcaagcag 221
            |||||| ||||| ||||||| ||||| |||||||||||||||||| ||||| ||||||||
Sbjct: 1307 agtgcacgaaaatggcactgctaacaaacattacatgtcagcactaaaatcatcaagcag 1366

                                                                        
Query: 222  ctgtagtgatctagcctggtctggagacattcacctggaagatgttcatttctcctatcc 281
            ||||||| |||| ||||||||||| ||||||||||| |||| ||| || || || || ||
Sbjct: 1367 ctgtagtaatcttgcctggtctggtgacattcacctagaaggtgtccacttttcttaccc 1426

                                                                        
Query: 282  actgagatctgatgtggatgtcttaaatgggcttgatcttgtaattgagtgtggaaaagt 341
            ||||||||||||||||||  ||||||||||||||||||||  |||||||||||||||| |
Sbjct: 1427 actgagatctgatgtggagatcttaaatgggcttgatcttacaattgagtgtggaaaaat 1486

                                                                        
Query: 342  cacagcacttgttggctctagtggtgctggaaaaagcactgtggtgcaacttttagcgcg 401
             ||||||||||||||  |||||||||||||||||||||| |||||||||||| | || ||
Sbjct: 1487 tacagcacttgttggacctagtggtgctggaaaaagcacagtggtgcaacttcttgcacg 1546

                                                                        
Query: 402  gtactatgagcctactcaaggccgcatcacggtggcaggggaagacattcgtgtatttga 461
            |||||||||||| ||||| || |||||||| ||||| ||||||||||| |||||||||||
Sbjct: 1547 gtactatgagccaactcatggtcgcatcactgtggctggggaagacatccgtgtatttga 1606

                                                                        
Query: 462  taaaagagaatggtttcaaattgtatccctagtgaatcaggaccctgtcctattctcggc 521
            |||||||||||||| || | |||||||| |||||||||||||||||||||||||||| | 
Sbjct: 1607 taaaagagaatggtctcgagttgtatccttagtgaatcaggaccctgtcctattctcagt 1666

                                               
Query: 522  atctgttggggaaaacattgcttatggtcttccgg 556
             ||||| || |||||||| ||||||||||||||||
Sbjct: 1667 ttctgtcggagaaaacatcgcttatggtcttccgg 1701



 Score =  125 bits (63), Expect = 2e-25
 Identities = 94/102 (92%), Gaps = 2/102 (1%)
 Strand = Plus / Plus

                                                                        
Query: 27   gtgatctgcgtgggnacatttgcttctatagagnagaataaattctgttctgtcagcaaa 86
            ||||||| |||||| |||||||||||| ||||  |||||||||||| |||| |||||| |
Sbjct: 1189 gtgatctacgtggg-acatttgcttctgtaga-aagaataaattctattctatcagcaga 1246

                                                      
Query: 87   ggacattgatgattcacttgcatatggtttagccaaagaact 128
            ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1247 ggacattgatgattcacttgcatatggtttagccaaagaact 1288
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>dbj|AK067140.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094I22, full
            insert sequence
          Length = 2793

 Score =  434 bits (219), Expect = e-118
 Identities = 351/395 (88%)
 Strand = Plus / Plus

                                                                        
Query: 162  agtgcatgaaaagggcactgttaacacacattacatgtcagcactgaaatcttcaagcag 221
            |||||| ||||| ||||||| ||||| |||||||||||||||||| ||||| ||||||||
Sbjct: 1308 agtgcacgaaaatggcactgctaacaaacattacatgtcagcactaaaatcatcaagcag 1367

                                                                        
Query: 222  ctgtagtgatctagcctggtctggagacattcacctggaagatgttcatttctcctatcc 281
            ||||||| |||| ||||||||||| ||||||||||| |||| ||| || || || || ||
Sbjct: 1368 ctgtagtaatcttgcctggtctggtgacattcacctagaaggtgtccacttttcttaccc 1427

                                                                        
Query: 282  actgagatctgatgtggatgtcttaaatgggcttgatcttgtaattgagtgtggaaaagt 341
            ||||||||||||||||||  ||||||||||||||||||||  |||||||||||||||| |
Sbjct: 1428 actgagatctgatgtggagatcttaaatgggcttgatcttacaattgagtgtggaaaaat 1487

                                                                        
Query: 342  cacagcacttgttggctctagtggtgctggaaaaagcactgtggtgcaacttttagcgcg 401
             ||||||||||||||  |||||||||||||||||||||| |||||||||||| | || ||
Sbjct: 1488 tacagcacttgttggacctagtggtgctggaaaaagcacagtggtgcaacttcttgcacg 1547

                                                                        
Query: 402  gtactatgagcctactcaaggccgcatcacggtggcaggggaagacattcgtgtatttga 461
            |||||||||||| ||||| || |||||||| ||||| ||||||||||| |||||||||||
Sbjct: 1548 gtactatgagccaactcatggtcgcatcactgtggctggggaagacatccgtgtatttga 1607

                                                                        
Query: 462  taaaagagaatggtttcaaattgtatccctagtgaatcaggaccctgtcctattctcggc 521
            |||||||||||||| || | |||||||| |||||||||||||||||||||||||||| | 
Sbjct: 1608 taaaagagaatggtctcgagttgtatccttagtgaatcaggaccctgtcctattctcagt 1667

                                               
Query: 522  atctgttggggaaaacattgcttatggtcttccgg 556
             ||||| || |||||||| ||||||||||||||||
Sbjct: 1668 ttctgtcggagaaaacatcgcttatggtcttccgg 1702



 Score =  125 bits (63), Expect = 2e-25
 Identities = 94/102 (92%), Gaps = 2/102 (1%)
 Strand = Plus / Plus

                                                                        
Query: 27   gtgatctgcgtgggnacatttgcttctatagagnagaataaattctgttctgtcagcaaa 86
            ||||||| |||||| |||||||||||| ||||  |||||||||||| |||| |||||| |
Sbjct: 1190 gtgatctacgtggg-acatttgcttctgtaga-aagaataaattctattctatcagcaga 1247

                                                      
Query: 87   ggacattgatgattcacttgcatatggtttagccaaagaact 128
            ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1248 ggacattgatgattcacttgcatatggtttagccaaagaact 1289
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  167 bits (84), Expect = 5e-38
 Identities = 120/132 (90%)
 Strand = Plus / Plus

                                                                            
Query: 280      ccactgagatctgatgtggatgtcttaaatgggcttgatcttgtaattgagtgtggaaaa 339
                ||||||||||||||||||||  ||||||||||||||||||||  ||||||||||||||||
Sbjct: 16329645 ccactgagatctgatgtggagatcttaaatgggcttgatcttacaattgagtgtggaaaa 16329704

                                                                            
Query: 340      gtcacagcacttgttggctctagtggtgctggaaaaagcactgtggtgcaacttttagcg 399
                 | ||||||||||||||  |||||||||||||||||||||| |||||||||||| | || 
Sbjct: 16329705 attacagcacttgttggacctagtggtgctggaaaaagcacagtggtgcaacttcttgca 16329764

                            
Query: 400      cggtactatgag 411
                ||||||||||||
Sbjct: 16329765 cggtactatgag 16329776



 Score =  125 bits (63), Expect = 2e-25
 Identities = 94/102 (92%), Gaps = 2/102 (1%)
 Strand = Plus / Plus

                                                                            
Query: 27       gtgatctgcgtgggnacatttgcttctatagagnagaataaattctgttctgtcagcaaa 86
                ||||||| |||||| |||||||||||| ||||  |||||||||||| |||| |||||| |
Sbjct: 16327953 gtgatctacgtggg-acatttgcttctgtaga-aagaataaattctattctatcagcaga 16328010

                                                          
Query: 87       ggacattgatgattcacttgcatatggtttagccaaagaact 128
                ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16328011 ggacattgatgattcacttgcatatggtttagccaaagaact 16328052



 Score =  121 bits (61), Expect = 3e-24
 Identities = 91/101 (90%)
 Strand = Plus / Plus

                                                                            
Query: 162      agtgcatgaaaagggcactgttaacacacattacatgtcagcactgaaatcttcaagcag 221
                |||||| ||||| ||||||| ||||| |||||||||||||||||| ||||| ||||||||
Sbjct: 16328071 agtgcacgaaaatggcactgctaacaaacattacatgtcagcactaaaatcatcaagcag 16328130

                                                         
Query: 222      ctgtagtgatctagcctggtctggagacattcacctggaag 262
                ||||||| |||| ||||||||||| ||||||||||| ||||
Sbjct: 16328131 ctgtagtaatcttgcctggtctggtgacattcacctagaag 16328171



 Score =  105 bits (53), Expect = 2e-19
 Identities = 83/93 (89%)
 Strand = Plus / Plus

                                                                            
Query: 410      agcctactcaaggccgcatcacggtggcaggggaagacattcgtgtatttgataaaagag 469
                |||| ||||| || |||||||| ||||| ||||||||||| |||||||||||||||||||
Sbjct: 16329853 agccaactcatggtcgcatcactgtggctggggaagacatccgtgtatttgataaaagag 16329912

                                                 
Query: 470      aatggtttcaaattgtatccctagtgaatcagg 502
                |||||| || | |||||||| ||||||||||||
Sbjct: 16329913 aatggtctcgagttgtatccttagtgaatcagg 16329945



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 53/59 (89%)
 Strand = Plus / Plus

                                                                           
Query: 498      tcaggaccctgtcctattctcggcatctgttggggaaaacattgcttatggtcttccgg 556
                ||||||||||||||||||||| |  ||||| || |||||||| ||||||||||||||||
Sbjct: 16330339 tcaggaccctgtcctattctcagtttctgtcggagaaaacatcgcttatggtcttccgg 16330397
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>dbj|AP005188.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0473C09
          Length = 141066

 Score =  167 bits (84), Expect = 5e-38
 Identities = 120/132 (90%)
 Strand = Plus / Plus

                                                                         
Query: 280   ccactgagatctgatgtggatgtcttaaatgggcttgatcttgtaattgagtgtggaaaa 339
             ||||||||||||||||||||  ||||||||||||||||||||  ||||||||||||||||
Sbjct: 35701 ccactgagatctgatgtggagatcttaaatgggcttgatcttacaattgagtgtggaaaa 35760

                                                                         
Query: 340   gtcacagcacttgttggctctagtggtgctggaaaaagcactgtggtgcaacttttagcg 399
              | ||||||||||||||  |||||||||||||||||||||| |||||||||||| | || 
Sbjct: 35761 attacagcacttgttggacctagtggtgctggaaaaagcacagtggtgcaacttcttgca 35820

                         
Query: 400   cggtactatgag 411
             ||||||||||||
Sbjct: 35821 cggtactatgag 35832



 Score =  125 bits (63), Expect = 2e-25
 Identities = 94/102 (92%), Gaps = 2/102 (1%)
 Strand = Plus / Plus

                                                                         
Query: 27    gtgatctgcgtgggnacatttgcttctatagagnagaataaattctgttctgtcagcaaa 86
             ||||||| |||||| |||||||||||| ||||  |||||||||||| |||| |||||| |
Sbjct: 34009 gtgatctacgtggg-acatttgcttctgtaga-aagaataaattctattctatcagcaga 34066

                                                       
Query: 87    ggacattgatgattcacttgcatatggtttagccaaagaact 128
             ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34067 ggacattgatgattcacttgcatatggtttagccaaagaact 34108



 Score =  121 bits (61), Expect = 3e-24
 Identities = 91/101 (90%)
 Strand = Plus / Plus

                                                                         
Query: 162   agtgcatgaaaagggcactgttaacacacattacatgtcagcactgaaatcttcaagcag 221
             |||||| ||||| ||||||| ||||| |||||||||||||||||| ||||| ||||||||
Sbjct: 34127 agtgcacgaaaatggcactgctaacaaacattacatgtcagcactaaaatcatcaagcag 34186

                                                      
Query: 222   ctgtagtgatctagcctggtctggagacattcacctggaag 262
             ||||||| |||| ||||||||||| ||||||||||| ||||
Sbjct: 34187 ctgtagtaatcttgcctggtctggtgacattcacctagaag 34227



 Score =  105 bits (53), Expect = 2e-19
 Identities = 83/93 (89%)
 Strand = Plus / Plus

                                                                         
Query: 410   agcctactcaaggccgcatcacggtggcaggggaagacattcgtgtatttgataaaagag 469
             |||| ||||| || |||||||| ||||| ||||||||||| |||||||||||||||||||
Sbjct: 35909 agccaactcatggtcgcatcactgtggctggggaagacatccgtgtatttgataaaagag 35968

                                              
Query: 470   aatggtttcaaattgtatccctagtgaatcagg 502
             |||||| || | |||||||| ||||||||||||
Sbjct: 35969 aatggtctcgagttgtatccttagtgaatcagg 36001



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 53/59 (89%)
 Strand = Plus / Plus

                                                                        
Query: 498   tcaggaccctgtcctattctcggcatctgttggggaaaacattgcttatggtcttccgg 556
             ||||||||||||||||||||| |  ||||| || |||||||| ||||||||||||||||
Sbjct: 36395 tcaggaccctgtcctattctcagtttctgtcggagaaaacatcgcttatggtcttccgg 36453
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>dbj|AP003916.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1634_H04
          Length = 151699

 Score =  167 bits (84), Expect = 5e-38
 Identities = 120/132 (90%)
 Strand = Plus / Plus

                                                                          
Query: 280    ccactgagatctgatgtggatgtcttaaatgggcttgatcttgtaattgagtgtggaaaa 339
              ||||||||||||||||||||  ||||||||||||||||||||  ||||||||||||||||
Sbjct: 150083 ccactgagatctgatgtggagatcttaaatgggcttgatcttacaattgagtgtggaaaa 150142

                                                                          
Query: 340    gtcacagcacttgttggctctagtggtgctggaaaaagcactgtggtgcaacttttagcg 399
               | ||||||||||||||  |||||||||||||||||||||| |||||||||||| | || 
Sbjct: 150143 attacagcacttgttggacctagtggtgctggaaaaagcacagtggtgcaacttcttgca 150202

                          
Query: 400    cggtactatgag 411
              ||||||||||||
Sbjct: 150203 cggtactatgag 150214



 Score =  125 bits (63), Expect = 2e-25
 Identities = 94/102 (92%), Gaps = 2/102 (1%)
 Strand = Plus / Plus

                                                                          
Query: 27     gtgatctgcgtgggnacatttgcttctatagagnagaataaattctgttctgtcagcaaa 86
              ||||||| |||||| |||||||||||| ||||  |||||||||||| |||| |||||| |
Sbjct: 148391 gtgatctacgtggg-acatttgcttctgtaga-aagaataaattctattctatcagcaga 148448

                                                        
Query: 87     ggacattgatgattcacttgcatatggtttagccaaagaact 128
              ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148449 ggacattgatgattcacttgcatatggtttagccaaagaact 148490



 Score =  121 bits (61), Expect = 3e-24
 Identities = 91/101 (90%)
 Strand = Plus / Plus

                                                                          
Query: 162    agtgcatgaaaagggcactgttaacacacattacatgtcagcactgaaatcttcaagcag 221
              |||||| ||||| ||||||| ||||| |||||||||||||||||| ||||| ||||||||
Sbjct: 148509 agtgcacgaaaatggcactgctaacaaacattacatgtcagcactaaaatcatcaagcag 148568

                                                       
Query: 222    ctgtagtgatctagcctggtctggagacattcacctggaag 262
              ||||||| |||| ||||||||||| ||||||||||| ||||
Sbjct: 148569 ctgtagtaatcttgcctggtctggtgacattcacctagaag 148609



 Score =  105 bits (53), Expect = 2e-19
 Identities = 83/93 (89%)
 Strand = Plus / Plus

                                                                          
Query: 410    agcctactcaaggccgcatcacggtggcaggggaagacattcgtgtatttgataaaagag 469
              |||| ||||| || |||||||| ||||| ||||||||||| |||||||||||||||||||
Sbjct: 150291 agccaactcatggtcgcatcactgtggctggggaagacatccgtgtatttgataaaagag 150350

                                               
Query: 470    aatggtttcaaattgtatccctagtgaatcagg 502
              |||||| || | |||||||| ||||||||||||
Sbjct: 150351 aatggtctcgagttgtatccttagtgaatcagg 150383



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 53/59 (89%)
 Strand = Plus / Plus

                                                                         
Query: 498    tcaggaccctgtcctattctcggcatctgttggggaaaacattgcttatggtcttccgg 556
              ||||||||||||||||||||| |  ||||| || |||||||| ||||||||||||||||
Sbjct: 150777 tcaggaccctgtcctattctcagtttctgtcggagaaaacatcgcttatggtcttccgg 150835
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>ref|NM_118677.2| Arabidopsis thaliana ATNAP8; ATPase, coupled to transmembrane
            movement of substances AT4G25450 (ATNAP8) transcript
            variant AT4G25450.1 mRNA, complete cds
          Length = 2293

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                         
Query: 349  cttgttggctctagtggtgctggaaaaag 377
            |||||||||||||||||||| ||||||||
Sbjct: 1562 cttgttggctctagtggtgcgggaaaaag 1590
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>ref|NM_001036637.1| Arabidopsis thaliana ATNAP8 AT4G25450 (ATNAP8) transcript variant
            AT4G25450.2 mRNA, complete cds
          Length = 2436

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                         
Query: 349  cttgttggctctagtggtgctggaaaaag 377
            |||||||||||||||||||| ||||||||
Sbjct: 1563 cttgttggctctagtggtgcgggaaaaag 1591
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>emb|AL079350.1|ATT30C3 Arabidopsis thaliana DNA chromosome 4, BAC clone T30C3 (ESSA project)
          Length = 77793

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 349   cttgttggctctagtggtgctggaaaaag 377
             |||||||||||||||||||| ||||||||
Sbjct: 60352 cttgttggctctagtggtgcgggaaaaag 60324
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>emb|AL161563.2|ATCHRIV63 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 63
          Length = 198777

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 349   cttgttggctctagtggtgctggaaaaag 377
             |||||||||||||||||||| ||||||||
Sbjct: 93234 cttgttggctctagtggtgcgggaaaaag 93206
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>emb|AL022197.2|ATM7J2 Arabidopsis thaliana DNA chromosome 4, P1 clone M7J2 (ESSA project)
          Length = 80386

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                          
Query: 349   cttgttggctctagtggtgctggaaaaag 377
             |||||||||||||||||||| ||||||||
Sbjct: 61584 cttgttggctctagtggtgcgggaaaaag 61612
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>gb|AY094470.1| Arabidopsis thaliana At4g25450/M7J2_180 mRNA, complete cds
          Length = 2270

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                         
Query: 349  cttgttggctctagtggtgctggaaaaag 377
            |||||||||||||||||||| ||||||||
Sbjct: 1561 cttgttggctctagtggtgcgggaaaaag 1589
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>dbj|AK220751.1| Arabidopsis thaliana mRNA for putative protein, complete cds, clone:
            RAFL22-16-G17
          Length = 2297

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                         
Query: 349  cttgttggctctagtggtgctggaaaaag 377
            |||||||||||||||||||| ||||||||
Sbjct: 1537 cttgttggctctagtggtgcgggaaaaag 1565
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>dbj|AK176612.1| Arabidopsis thaliana mRNA, partial cds, clone: RAFL25-13-K16
          Length = 2348

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                         
Query: 349  cttgttggctctagtggtgctggaaaaag 377
            |||||||||||||||||||| ||||||||
Sbjct: 1496 cttgttggctctagtggtgcgggaaaaag 1524
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>dbj|AK176118.1| Arabidopsis thaliana mRNA for putative protein, complete cds, clone:
            RAFL22-91-I02
          Length = 2297

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                         
Query: 349  cttgttggctctagtggtgctggaaaaag 377
            |||||||||||||||||||| ||||||||
Sbjct: 1537 cttgttggctctagtggtgcgggaaaaag 1565
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>dbj|AK176078.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL22-83-A11
          Length = 2311

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                         
Query: 349  cttgttggctctagtggtgctggaaaaag 377
            |||||||||||||||||||| ||||||||
Sbjct: 1564 cttgttggctctagtggtgcgggaaaaag 1592
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>dbj|AK175939.1| Arabidopsis thaliana mRNA for putative protein, complete cds, clone:
            RAFL22-62-A22
          Length = 2297

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                         
Query: 349  cttgttggctctagtggtgctggaaaaag 377
            |||||||||||||||||||| ||||||||
Sbjct: 1537 cttgttggctctagtggtgcgggaaaaag 1565
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>dbj|AK175486.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL21-91-K22
          Length = 2324

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                         
Query: 349  cttgttggctctagtggtgctggaaaaag 377
            |||||||||||||||||||| ||||||||
Sbjct: 1564 cttgttggctctagtggtgcgggaaaaag 1592
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>dbj|AK175416.1| Arabidopsis thaliana mRNA, partial cds, clone: RAFL21-85-E17
          Length = 2348

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                         
Query: 349  cttgttggctctagtggtgctggaaaaag 377
            |||||||||||||||||||| ||||||||
Sbjct: 1496 cttgttggctctagtggtgcgggaaaaag 1524
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>dbj|AK175205.1| Arabidopsis thaliana mRNA, partial cds, clone: RAFL21-63-B02
          Length = 2348

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                         
Query: 349  cttgttggctctagtggtgctggaaaaag 377
            |||||||||||||||||||| ||||||||
Sbjct: 1496 cttgttggctctagtggtgcgggaaaaag 1524
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>emb|AL138837.12| Human DNA sequence from clone RP1-149P10 on chromosome 1 Contains the
             5' end of a variant of the PHC2 gene for polyhomeotic-like
             2 (Drosophila) and the 5' end of the ZNF31 gene for zinc
             finger protein 31 (KOX 29), complete sequence
          Length = 98873

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 129   tgacaataaagaaactgaagat 150
             ||||||||||||||||||||||
Sbjct: 32323 tgacaataaagaaactgaagat 32302
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>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome
          Length = 3544776

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 256    ctggaagatgttcatttctcct 277
              ||||||||||||||||||||||
Sbjct: 370572 ctggaagatgttcatttctcct 370551
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>gb|AC154294.2| Mus musculus BAC clone RP23-431B18 from 16, complete sequence
          Length = 204507

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 182    ttaacacacattacatgtcagcactg 207
              |||| |||||||||||||||||||||
Sbjct: 164056 ttaatacacattacatgtcagcactg 164081
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>gb|AE006047.1| Pasteurella multocida subsp. multocida str. Pm70 section 14 of 204 of
            the complete genome
          Length = 13792

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 361  agtggtgctggaaaaagcact 381
            |||||||||||||||||||||
Sbjct: 6864 agtggtgctggaaaaagcact 6884
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>emb|AL158821.16| Human DNA sequence from clone RP1-75H8 on chromosome Xq22.3-23 Contains
             the 3' end of the CLDN2 gene for claudin 2, a novel gene,
             the 5' end of a eukaryotic translation elongation factor 1
             alpha 1 (EEF1A1) pseudogene and a CpG island, complete
             sequence
          Length = 109465

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 361   agtggtgctggaaaaagcactgtgg 385
             ||||||||||||||||||| |||||
Sbjct: 16305 agtggtgctggaaaaagcagtgtgg 16329
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>gb|AC108066.3| Homo sapiens BAC clone RP11-521H5 from 2, complete sequence
          Length = 158599

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 79    tcagcaaaggacattgatgattcac 103
             |||||||| ||||||||||||||||
Sbjct: 30925 tcagcaaacgacattgatgattcac 30901
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>dbj|AB065043.1| Silene vulgaris Ty1-copia type retrotransposon VUR4 gene for
           reverse transcriptase, partial cds
          Length = 276

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 459 tgataaaagagaatggtttca 479
           |||||||||||||||||||||
Sbjct: 173 tgataaaagagaatggtttca 193
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>dbj|AB065012.1| Silene nutans Ty1-copia type retrotransposon NUR3 gene for reverse
           transcriptase, partial cds
          Length = 276

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 461 ataaaagagaatggtttcaaa 481
           |||||||||||||||||||||
Sbjct: 175 ataaaagagaatggtttcaaa 195
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>gb|AC109509.20| Mus musculus chromosome 14, clone RP23-16M15, complete sequence
          Length = 216410

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 527   ttggggaaaacattgcttatggtc 550
             |||||||||||||||||| |||||
Sbjct: 27660 ttggggaaaacattgcttttggtc 27637
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>gb|AC096338.17| Rattus norvegicus X BAC CH230-95I19 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 236662

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 515    tctcggcatctgttggggaa 534
              ||||||||||||||||||||
Sbjct: 145657 tctcggcatctgttggggaa 145676
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>gb|AC153972.6| Mus musculus 10 BAC RP24-383P4 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 182933

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 80    cagcaaaggacattgatgat 99
             ||||||||||||||||||||
Sbjct: 41867 cagcaaaggacattgatgat 41848
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>ref|XM_982303.1| PREDICTED: Mus musculus collagen-like tail subunit (single strand of
            homotrimer) of asymmetric acetylcholinesterase,
            transcript variant 3 (Colq), mRNA
          Length = 2837

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 527  ttggggaaaacattgcttatggtc 550
            |||||||||||||||||| |||||
Sbjct: 2554 ttggggaaaacattgcttttggtc 2577
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>ref|XM_356716.5| PREDICTED: Mus musculus collagen-like tail subunit (single strand of
            homotrimer) of asymmetric acetylcholinesterase,
            transcript variant 1 (Colq), mRNA
          Length = 2837

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 527  ttggggaaaacattgcttatggtc 550
            |||||||||||||||||| |||||
Sbjct: 2554 ttggggaaaacattgcttttggtc 2577
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>emb|AL357522.10| Human DNA sequence from clone RP11-685G11 on chromosome 6 Contains two
             CpG islands, complete sequence
          Length = 124506

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 122   aagaacttgacaataaagaa 141
             ||||||||||||||||||||
Sbjct: 14744 aagaacttgacaataaagaa 14763
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>emb|X53419.1|MMGGLINE M.mulatta gamma-globin-1(G), gamma-globin-2(A) genes and L1 LINE
            element
          Length = 11286

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 121  aaagaacttgacaataaagaaact 144
            |||||||| |||||||||||||||
Sbjct: 3904 aaagaactagacaataaagaaact 3927
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>gb|AC164436.2| Mus musculus BAC clone RP23-134C5 from chromosome 14, complete sequence
          Length = 220260

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 255   cctggaagatgttcatttct 274
             ||||||||||||||||||||
Sbjct: 56130 cctggaagatgttcatttct 56111
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>emb|BX469903.9| Zebrafish DNA sequence from clone CH211-46H12 in linkage group 23,
              complete sequence
          Length = 175747

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 371    gaaaaagcactgtggtgcaa 390
              ||||||||||||||||||||
Sbjct: 128032 gaaaaagcactgtggtgcaa 128013
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>dbj|AK134212.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched
            library, clone:5830477J02 product:Acetylcholinesterase
            collagenic tail peptide precursor (AChE Q subunit)
            (Acetylcholinesterase-associated collagen) homolog
            [Rattus norvegicus], full insert sequence
          Length = 2830

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 527  ttggggaaaacattgcttatggtc 550
            |||||||||||||||||| |||||
Sbjct: 2559 ttggggaaaacattgcttttggtc 2582
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>gb|AC092417.2| Homo sapiens chromosome 3 clone RP11-90M23, complete sequence
          Length = 167263

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 162    agtgcatgaaaagggcactg 181
              ||||||||||||||||||||
Sbjct: 142579 agtgcatgaaaagggcactg 142560
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>emb|BX470178.13| Zebrafish DNA sequence from clone CH211-285K18, complete sequence
          Length = 166954

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 261   agatgttcatttctcctatccact 284
             ||||||||||||||||| ||||||
Sbjct: 32760 agatgttcatttctcctttccact 32783
to top
>ref|XM_624684.1| PREDICTED: Apis mellifera similar to Pcnx protein (LOC552309), mRNA
          Length = 6660

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 442  gaagacattcgtgtatttga 461
            ||||||||||||||||||||
Sbjct: 4508 gaagacattcgtgtatttga 4489
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>gb|AC140200.4| Mus musculus BAC clone RP23-263K2 from 14, complete sequence
          Length = 168635

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 255   cctggaagatgttcatttct 274
             ||||||||||||||||||||
Sbjct: 52298 cctggaagatgttcatttct 52317
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>emb|BX294130.5| Zebrafish DNA sequence from clone DKEY-263O22 in linkage group 19,
              complete sequence
          Length = 205973

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 160    agagtgcatgaaaagggcac 179
              ||||||||||||||||||||
Sbjct: 175071 agagtgcatgaaaagggcac 175052
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>dbj|AP006193.1| Homo sapiens genomic DNA, chromosome 3, clone:RP11-815I22, complete
             sequence
          Length = 205834

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 162   agtgcatgaaaagggcactg 181
             ||||||||||||||||||||
Sbjct: 53439 agtgcatgaaaagggcactg 53420
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>gb|AC004069.1|AC004069 Homo sapiens chromosome 4 clone B71M12 map 4q25, complete sequence
          Length = 135648

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 461   ataaaagagaatggtttcaa 480
             ||||||||||||||||||||
Sbjct: 62008 ataaaagagaatggtttcaa 62027
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>dbj|AP000500.1| Homo sapiens genomic DNA, chromosome 3p21.3, clone:603 to 320,
             anti-oncogene region, section 3/3
          Length = 254437

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 162   agtgcatgaaaagggcactg 181
             ||||||||||||||||||||
Sbjct: 62306 agtgcatgaaaagggcactg 62325
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>dbj|AB026899.1| Homo sapiens DNA, DLEC1 to ORCTL4 gene region, section 2/2 (downstream
             sequence from ORCTL4)
          Length = 80485

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 162   agtgcatgaaaagggcactg 181
             ||||||||||||||||||||
Sbjct: 24977 agtgcatgaaaagggcactg 24996


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,064,951
Number of Sequences: 3902068
Number of extensions: 5064951
Number of successful extensions: 99236
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 99107
Number of HSP's gapped (non-prelim): 129
length of query: 556
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 533
effective length of database: 17,143,297,704
effective search space: 9137377676232
effective search space used: 9137377676232
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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