ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags1m01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_473880.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1551 Score = 565 bits (285), Expect = e-158 Identities = 489/557 (87%) Strand = Plus / Plus Query: 52 gggtttaaggggcatggcatgttggcaccattcacagctggatggcagagcaatgatgtg 111 ||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 184 gggttcaaggggcatggcatgttggcaccattcacagctggttggcagagcaccgatgtt 243 Query: 112 catccgctggttattgagagatctgagggttcttatgtttatgacatcaatgggaataag 171 |||||| | || ||||| |||||||||||||| ||||| ||||| ||| | || || ||| Sbjct: 244 catccgttagtcattgaaagatctgagggttcgtatgtatatgatatcgacggaaagaag 303 Query: 172 tatctagattctctagcaggactgtggtgtacagctttaggtggtagtgagcctcgatta 231 |||||||||||||| || ||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 304 tatctagattctcttgcgggactatggtgtacagctttaggtggtagtgaacctcgatta 363 Query: 232 gtcaaagctgcaactgaccagttaaacaagttacccttctatcactccttctggaatcgt 291 ||||||||||||||||| || ||| ||||||| ||||||||||||||||| ||||| ||| Sbjct: 364 gtcaaagctgcaactgagcaattacacaagttgcccttctatcactccttttggaaccgt 423 Query: 292 acaaccaaaccaacattggatcttgcagatgaccttcttagcatgttcactgcaaacaaa 351 || ||||||||| | ||||||||||| | || || ||||||||||||||||||| || Sbjct: 424 acgaccaaaccatctctggatcttgcaaaggaactgcttagcatgttcactgcaagggaa 483 Query: 352 atgggaaaggcattcttcacaaacagtggttcggaagcaaacgactcacaggtcaaacta 411 |||||||| | ||||||||||| |||||||| |||||||| || || ||||| ||||| Sbjct: 484 atgggaaaagtgttcttcacaaatagtggttcagaagcaaatgattctcaggtaaaactg 543 Query: 412 gtatggtattataacaatgcattggggaggccaaacaagaagaagtttattgcacgaaca 471 || |||||||||||||||||| |||| |||||| |||||||||| |||||||||||| || Sbjct: 544 gtctggtattataacaatgcactgggaaggccagacaagaagaaatttattgcacgatca 603 Query: 472 aaagcatatcatggatcaacgttaatatcagctagtctcactggtcttcctgccctgcac 531 ||| |||| ||||||||||| |||||||||||||||| | ||||||||||| ||||| Sbjct: 604 aaatcataccatggatcaacactaatatcagctagtctatccggtcttcctgcactgcat 663 Query: 532 cagaagttcgatctaccagcaccttttgtactgcacacagattgccctcactactggcgc 591 |||||||| ||||| || ||||||||||| |||||||| || |||||||||||||||||| Sbjct: 664 cagaagtttgatctgcctgcaccttttgttctgcacacggactgccctcactactggcgc 723 Query: 592 ttccatcttcctggtga 608 ||||||||||||||||| Sbjct: 724 ttccatcttcctggtga 740
>dbj|AK102306.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033090A04, full insert sequence Length = 2070 Score = 565 bits (285), Expect = e-158 Identities = 489/557 (87%) Strand = Plus / Plus Query: 52 gggtttaaggggcatggcatgttggcaccattcacagctggatggcagagcaatgatgtg 111 ||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 367 gggttcaaggggcatggcatgttggcaccattcacagctggttggcagagcaccgatgtt 426 Query: 112 catccgctggttattgagagatctgagggttcttatgtttatgacatcaatgggaataag 171 |||||| | || ||||| |||||||||||||| ||||| ||||| ||| | || || ||| Sbjct: 427 catccgttagtcattgaaagatctgagggttcgtatgtatatgatatcgacggaaagaag 486 Query: 172 tatctagattctctagcaggactgtggtgtacagctttaggtggtagtgagcctcgatta 231 |||||||||||||| || ||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 487 tatctagattctcttgcgggactatggtgtacagctttaggtggtagtgaacctcgatta 546 Query: 232 gtcaaagctgcaactgaccagttaaacaagttacccttctatcactccttctggaatcgt 291 ||||||||||||||||| || ||| ||||||| ||||||||||||||||| ||||| ||| Sbjct: 547 gtcaaagctgcaactgagcaattacacaagttgcccttctatcactccttttggaaccgt 606 Query: 292 acaaccaaaccaacattggatcttgcagatgaccttcttagcatgttcactgcaaacaaa 351 || ||||||||| | ||||||||||| | || || ||||||||||||||||||| || Sbjct: 607 acgaccaaaccatctctggatcttgcaaaggaactgcttagcatgttcactgcaagggaa 666 Query: 352 atgggaaaggcattcttcacaaacagtggttcggaagcaaacgactcacaggtcaaacta 411 |||||||| | ||||||||||| |||||||| |||||||| || || ||||| ||||| Sbjct: 667 atgggaaaagtgttcttcacaaatagtggttcagaagcaaatgattctcaggtaaaactg 726 Query: 412 gtatggtattataacaatgcattggggaggccaaacaagaagaagtttattgcacgaaca 471 || |||||||||||||||||| |||| |||||| |||||||||| |||||||||||| || Sbjct: 727 gtctggtattataacaatgcactgggaaggccagacaagaagaaatttattgcacgatca 786 Query: 472 aaagcatatcatggatcaacgttaatatcagctagtctcactggtcttcctgccctgcac 531 ||| |||| ||||||||||| |||||||||||||||| | ||||||||||| ||||| Sbjct: 787 aaatcataccatggatcaacactaatatcagctagtctatccggtcttcctgcactgcat 846 Query: 532 cagaagttcgatctaccagcaccttttgtactgcacacagattgccctcactactggcgc 591 |||||||| ||||| || ||||||||||| |||||||| || |||||||||||||||||| Sbjct: 847 cagaagtttgatctgcctgcaccttttgttctgcacacggactgccctcactactggcgc 906 Query: 592 ttccatcttcctggtga 608 ||||||||||||||||| Sbjct: 907 ttccatcttcctggtga 923
>gb|AF297651.1| Oryza sativa putative aminotransferase mRNA, complete cds Length = 1993 Score = 565 bits (285), Expect = e-158 Identities = 489/557 (87%) Strand = Plus / Plus Query: 52 gggtttaaggggcatggcatgttggcaccattcacagctggatggcagagcaatgatgtg 111 ||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 275 gggttcaaggggcatggcatgttggcaccattcacagctggttggcagagcaccgatgtt 334 Query: 112 catccgctggttattgagagatctgagggttcttatgtttatgacatcaatgggaataag 171 |||||| | || ||||| |||||||||||||| ||||| ||||| ||| | || || ||| Sbjct: 335 catccgttagtcattgaaagatctgagggttcgtatgtatatgatatcgacggaaagaag 394 Query: 172 tatctagattctctagcaggactgtggtgtacagctttaggtggtagtgagcctcgatta 231 |||||||||||||| || ||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 395 tatctagattctcttgcgggactatggtgtacagctttaggtggtagtgaacctcgatta 454 Query: 232 gtcaaagctgcaactgaccagttaaacaagttacccttctatcactccttctggaatcgt 291 ||||||||||||||||| || ||| ||||||| ||||||||||||||||| ||||| ||| Sbjct: 455 gtcaaagctgcaactgagcaattacacaagttgcccttctatcactccttttggaaccgt 514 Query: 292 acaaccaaaccaacattggatcttgcagatgaccttcttagcatgttcactgcaaacaaa 351 || ||||||||| | ||||||||||| | || || ||||||||||||||||||| || Sbjct: 515 acgaccaaaccatctctggatcttgcaaaggaactgcttagcatgttcactgcaagggaa 574 Query: 352 atgggaaaggcattcttcacaaacagtggttcggaagcaaacgactcacaggtcaaacta 411 |||||||| | ||||||||||| |||||||| |||||||| || || ||||| ||||| Sbjct: 575 atgggaaaagtgttcttcacaaatagtggttcagaagcaaatgattctcaggtaaaactg 634 Query: 412 gtatggtattataacaatgcattggggaggccaaacaagaagaagtttattgcacgaaca 471 || |||||||||||||||||| |||| |||||| |||||||||| |||||||||||| || Sbjct: 635 gtctggtattataacaatgcactgggaaggccagacaagaagaaatttattgcacgatca 694 Query: 472 aaagcatatcatggatcaacgttaatatcagctagtctcactggtcttcctgccctgcac 531 ||| |||| ||||||||||| |||||||||||||||| | ||||||||||| ||||| Sbjct: 695 aaatcataccatggatcaacactaatatcagctagtctatccggtcttcctgcactgcat 754 Query: 532 cagaagttcgatctaccagcaccttttgtactgcacacagattgccctcactactggcgc 591 |||||||| ||||| || ||||||||||| |||||||| || |||||||||||||||||| Sbjct: 755 cagaagtttgatctgcctgcaccttttgttctgcacacggactgccctcactactggcgc 814 Query: 592 ttccatcttcctggtga 608 ||||||||||||||||| Sbjct: 815 ttccatcttcctggtga 831
>gb|AY105736.1| Zea mays PCO069643 mRNA sequence Length = 2096 Score = 537 bits (271), Expect = e-149 Identities = 487/559 (87%) Strand = Plus / Plus Query: 52 gggtttaaggggcatggcatgttggcaccattcacagctggatggcagagcaatgatgtg 111 ||||| ||||| || |||||| |||| || || |||||||| ||||||||||||||| || Sbjct: 407 gggttcaagggccacggcatgctggcgccttttacagctggctggcagagcaatgatttg 466 Query: 112 catccgctggttattgagagatctgagggttcttatgtttatgacatcaatgggaataag 171 || || ||| | |||||||||||||||||||| ||||| |||||||| |||||||| ||| Sbjct: 467 caccctctgatcattgagagatctgagggttcctatgtctatgacattaatgggaacaag 526 Query: 172 tatctagattctctagcaggactgtggtgtacagctttaggtggtagtgagcctcgatta 231 ||||| || ||||| |||||| | ||||| ||||||||||||||||| |||||||| ||| Sbjct: 527 tatctggactctcttgcaggattatggtgcacagctttaggtggtagcgagcctcgctta 586 Query: 232 gtcaaagctgcaactgaccagttaaacaagttacccttctatcactccttctggaatcgt 291 |||||||| |||||||| || |||||||| |||||||||| || ||||||||||| ||| Sbjct: 587 gtcaaagcagcaactgagcaattaaacaaactacccttctaccattccttctggaaccgt 646 Query: 292 acaaccaaaccaacattggatcttgcagatgaccttcttagcatgttcactgcaaacaaa 351 ||||| ||||| | |||||||||||| | || | ||||||||||||||||||| || Sbjct: 647 acaacaaaaccttcgttggatcttgcacaggagatccttagcatgttcactgcaagggaa 706 Query: 352 atgggaaaggcattcttcacaaacagtggttcggaagcaaacgactcacaggtcaaacta 411 ||||| || | |||||||||||||||||||| |||||||| ||||| |||||||||||| Sbjct: 707 atggggaaagttttcttcacaaacagtggttcagaagcaaatgactctcaggtcaaacta 766 Query: 412 gtatggtattataacaatgcattggggaggccaaacaagaagaagtttattgcacgaaca 471 |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| || Sbjct: 767 gtatggtattataacaatgcattggggaggccaaacaagaagaaatttattgcgcgatca 826 Query: 472 aaagcatatcatggatcaacgttaatatcagctagtctcactggtcttcctgccctgcac 531 |||||||| |||||||| || || || ||||| || || ||||||||||||||||| ||| Sbjct: 827 aaagcataccatggatctacattgatttcagcgagcctaactggtcttcctgccctacac 886 Query: 532 cagaagttcgatctaccagcaccttttgtactgcacacagattgccctcactactggcgc 591 |||||||| |||||||||||||||||||| |||||||| || ||||||||||||||||| Sbjct: 887 cagaagtttgatctaccagcaccttttgttctgcacactgactgccctcactactggcga 946 Query: 592 ttccatcttcctggtgaga 610 | ||||||||||| |||| Sbjct: 947 tatcatcttcctggcgaga 965
>gb|BT018495.1| Zea mays clone EL01N0426C11.d mRNA sequence Length = 1897 Score = 500 bits (252), Expect = e-138 Identities = 484/560 (86%), Gaps = 1/560 (0%) Strand = Plus / Plus Query: 52 gggtttaaggggcatggcatgttggcaccattcacagctggatggcagagcaatgatgtg 111 ||||| ||||| || |||||| |||| || || |||||||| ||||||||||||||| || Sbjct: 245 gggttcaagggccacggcatgctggcgccttttacagctggctggcagagcaatgatttg 304 Query: 112 catccgctggttattgagagatctgagggttcttatgtttatgacatcaatgggaataag 171 || || ||| | |||||||||||||||||||| ||||| |||||||| |||||||| ||| Sbjct: 305 caccctctgatcattgagagatctgagggttcctatgtctatgacattaatgggaacaag 364 Query: 172 tatctagattctctagcaggactgtggtgtacagctttaggtggtagtgagcctcgatta 231 ||||| || ||||| |||||| | ||||| ||||||||||||||||| |||||||||||| Sbjct: 365 tatctggactctcttgcaggattatggtgcacagctttaggtggtagcgagcctcgatta 424 Query: 232 gtcaaagctgcaactgaccagttaaacaagttacccttctatcactccttctggaatcgt 291 ||||||| || ||||| || |||||||| |||||||||| || ||||||||||| ||| Sbjct: 425 ctcaaagcagctactgagcaattaaacaaactacccttctaccattccttctggaaccgt 484 Query: 292 acaaccaaaccaacattggatcttgcagatgaccttcttagcatgttcactgcaaacaaa 351 ||||| ||||| | |||||||||||| | || | ||||||||||||||||||| | Sbjct: 485 acaacaaaaccttcgttggatcttgcacaggagatccttagcatgttcactgcaagggag 544 Query: 352 atgggaaaggcattcttcacaaacagtggttcggaagcaaacgactcacaggtcaaacta 411 ||||| || | |||||||||||||||||||| |||||||| ||||| |||||||||||| Sbjct: 545 atggggaaagttttcttcacaaacagtggttcagaagcaaatgactctcaggtcaaacta 604 Query: 412 gtatggtattataacaatgcattggggaggccaaacaagaagaagtttattgcacgaaca 471 |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| || Sbjct: 605 gtatggtattataacaatgcattggggaggccaaacaagaagaaatttattgcgcgatca 664 Query: 472 aaagcatatcatggatcaacgtt-aatatcagctagtctcactggtcttcctgccctgca 530 ||||||||||||||||| || || | ||||| || || ||||||||||||||||| || Sbjct: 665 aaagcatatcatggatctacattgggtttcagcgagcctaactggtcttcctgccctaca 724 Query: 531 ccagaagttcgatctaccagcaccttttgtactgcacacagattgccctcactactggcg 590 ||||||||| ||||| ||||||||||||| |||||||| || ||||||||||||||||| Sbjct: 725 ccagaagtttgatctttcagcaccttttgttctgcacactgactgccctcactactggcg 784 Query: 591 cttccatcttcctggtgaga 610 | |||||||||||||||| Sbjct: 785 atatcatcttcctggtgaga 804
>ref|XM_480608.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1848 Score = 498 bits (251), Expect = e-137 Identities = 482/559 (86%) Strand = Plus / Plus Query: 52 gggtttaaggggcatggcatgttggcaccattcacagctggatggcagagcaatgatgtg 111 ||||| ||||||||||||||| |||| |||||||| |||||||||||||||| ||| || Sbjct: 273 gggttcaaggggcatggcatgctggccccattcactgctggatggcagagcaccgatttg 332 Query: 112 catccgctggttattgagagatctgagggttcttatgtttatgacatcaatgggaataag 171 ||||| ||||||||||| ||||||||||||||||| |||||||| ||||||||||| ||| Sbjct: 333 catcctctggttattgacagatctgagggttcttacgtttatgatatcaatgggaagaag 392 Query: 172 tatctagattctctagcaggactgtggtgtacagctttaggtggtagtgagcctcgatta 231 || ||||| |||| |||||| |||||| ||| || || ||||||| |||||||||||| Sbjct: 393 tacatagatgctcttgcaggattgtggtctacggcattgggtggtaatgagcctcgattg 452 Query: 232 gtcaaagctgcaactgaccagttaaacaagttacccttctatcactccttctggaatcgt 291 |||||||||||||||| || || ||||| ||||||||||| |||||||| ||||| ||| Sbjct: 453 atcaaagctgcaactgatcaattgaacaaattacccttctaccactccttttggaaccgt 512 Query: 292 acaaccaaaccaacattggatcttgcagatgaccttcttagcatgttcactgcaaacaaa 351 || |||||||| ||||||||||||| |||| |||| |||||||||||||||| || Sbjct: 513 actaccaaaccctcattggatcttgctaatgaaattctcagcatgttcactgcaagggaa 572 Query: 352 atgggaaaggcattcttcacaaacagtggttcggaagcaaacgactcacaggtcaaacta 411 |||||||| |||||| ||||| |||||||| |||||||| || || ||||| || ||| Sbjct: 573 atgggaaaaatattctttacaaatagtggttcagaagcaaatgattctcaggtaaagcta 632 Query: 412 gtatggtattataacaatgcattggggaggccaaacaagaagaagtttattgcacgaaca 471 || ||||||||||||||||||||||| || || ||||||||||| ||||| ||||| || Sbjct: 633 gtttggtattataacaatgcattgggaagacctaacaagaagaaatttatcgcacgctca 692 Query: 472 aaagcatatcatggatcaacgttaatatcagctagtctcactggtcttcctgccctgcac 531 ||| |||||||||||||||| ||| | ||||| ||||| | ||||||||||| || ||| Sbjct: 693 aaatcatatcatggatcaacattagtgtcagccagtctatcaggtcttcctgctcttcac 752 Query: 532 cagaagttcgatctaccagcaccttttgtactgcacacagattgccctcactactggcgc 591 || ||||| ||||| ||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 753 caaaagtttgatctgccagctccttttgttctgcacacagattgccctcactactggcgc 812 Query: 592 ttccatcttcctggtgaga 610 ||||||||||||| ||||| Sbjct: 813 ttccatcttcctgatgaga 831
>dbj|AK103274.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033124J10, full insert sequence Length = 1848 Score = 498 bits (251), Expect = e-137 Identities = 482/559 (86%) Strand = Plus / Plus Query: 52 gggtttaaggggcatggcatgttggcaccattcacagctggatggcagagcaatgatgtg 111 ||||| ||||||||||||||| |||| |||||||| |||||||||||||||| ||| || Sbjct: 273 gggttcaaggggcatggcatgctggccccattcactgctggatggcagagcaccgatttg 332 Query: 112 catccgctggttattgagagatctgagggttcttatgtttatgacatcaatgggaataag 171 ||||| ||||||||||| ||||||||||||||||| |||||||| ||||||||||| ||| Sbjct: 333 catcctctggttattgacagatctgagggttcttacgtttatgatatcaatgggaagaag 392 Query: 172 tatctagattctctagcaggactgtggtgtacagctttaggtggtagtgagcctcgatta 231 || ||||| |||| |||||| |||||| ||| || || ||||||| |||||||||||| Sbjct: 393 tacatagatgctcttgcaggattgtggtctacggcattgggtggtaatgagcctcgattg 452 Query: 232 gtcaaagctgcaactgaccagttaaacaagttacccttctatcactccttctggaatcgt 291 |||||||||||||||| || || ||||| ||||||||||| |||||||| ||||| ||| Sbjct: 453 atcaaagctgcaactgatcaattgaacaaattacccttctaccactccttttggaaccgt 512 Query: 292 acaaccaaaccaacattggatcttgcagatgaccttcttagcatgttcactgcaaacaaa 351 || |||||||| ||||||||||||| |||| |||| |||||||||||||||| || Sbjct: 513 actaccaaaccctcattggatcttgctaatgaaattctcagcatgttcactgcaagggaa 572 Query: 352 atgggaaaggcattcttcacaaacagtggttcggaagcaaacgactcacaggtcaaacta 411 |||||||| |||||| ||||| |||||||| |||||||| || || ||||| || ||| Sbjct: 573 atgggaaaaatattctttacaaatagtggttcagaagcaaatgattctcaggtaaagcta 632 Query: 412 gtatggtattataacaatgcattggggaggccaaacaagaagaagtttattgcacgaaca 471 || ||||||||||||||||||||||| || || ||||||||||| ||||| ||||| || Sbjct: 633 gtttggtattataacaatgcattgggaagacctaacaagaagaaatttatcgcacgctca 692 Query: 472 aaagcatatcatggatcaacgttaatatcagctagtctcactggtcttcctgccctgcac 531 ||| |||||||||||||||| ||| | ||||| ||||| | ||||||||||| || ||| Sbjct: 693 aaatcatatcatggatcaacattagtgtcagccagtctatcaggtcttcctgctcttcac 752 Query: 532 cagaagttcgatctaccagcaccttttgtactgcacacagattgccctcactactggcgc 591 || ||||| ||||| ||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 753 caaaagtttgatctgccagctccttttgttctgcacacagattgccctcactactggcgc 812 Query: 592 ttccatcttcctggtgaga 610 ||||||||||||| ||||| Sbjct: 813 ttccatcttcctgatgaga 831
>ref|XM_473879.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1494 Score = 428 bits (216), Expect = e-117 Identities = 485/575 (84%) Strand = Plus / Plus Query: 35 actcaaccgnacgaaaagggtttaaggggcatggcatgttggcaccattcacagctggat 94 ||||||||| | |||| ||||||||||| || |||| ||||||||||||| || |||| Sbjct: 113 actcaaccgaaggaaatgggtttaagggacactccatgctggcaccattcactgccggat 172 Query: 95 ggcagagcaatgatgtgcatccgctggttattgagagatctgagggttcttatgtttatg 154 |||| || || || | || || ||||||| ||||| |||||||||||||| |||| Sbjct: 173 ggcactccacagacctggagcccttgattattgaaagatcagagggttcttatgtctatg 232 Query: 155 acatcaatgggaataagtatctagattctctagcaggactgtggtgtacagctttaggtg 214 | | ||| ||||| ||||| | ||| | ||||||||| ||||||||||||| ||||||| Sbjct: 233 atagcaaggggaacaagtacttggatacactagcaggattgtggtgtacagccttaggtg 292 Query: 215 gtagtgagcctcgattagtcaaagctgcaactgaccagttaaacaagttacccttctatc 274 | ||||||||||| ||||| ||||| ||||| ||||| ||||||||||| || ||||| | Sbjct: 293 gcagtgagcctcggttagtgaaagcagcaaccgaccaattaaacaagttgccgttctacc 352 Query: 275 actccttctggaatcgtacaaccaaaccaacattggatcttgcagatgaccttcttagca 334 ||||||| ||||| ||||| |||| ||| ||||||||||||| || || ||| | |||| Sbjct: 353 actccttttggaacagtacagccaagccaccattggatcttgctgaggaacttatcagca 412 Query: 335 tgttcactgcaaacaaaatgggaaaggcattcttcacaaacagtggttcggaagcaaacg 394 |||||||||| || |||||||||| | ||||| |||||||| ||||| |||||||| | Sbjct: 413 tgttcactgccaaggaaatgggaaaagtgttctttacaaacagcggttctgaagcaaatg 472 Query: 395 actcacaggtcaaactagtatggtattataacaatgcattggggaggccaaacaagaaga 454 |||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||| | Sbjct: 473 actctcaggtcaaactagtatggtactataacaatgcattggggagaccaaacaagaaaa 532 Query: 455 agtttattgcacgaacaaaagcatatcatggatcaacgttaatatcagctagtctcactg 514 || | ||||||| | || |||||||||| |||||||| ||||||||||||||||| ||| Sbjct: 533 agatcattgcacaatcacaagcatatcacggatcaacattaatatcagctagtctgtctg 592 Query: 515 gtcttcctgccctgcaccagaagttcgatctaccagcaccttttgtactgcacacagatt 574 | || ||||| |||| | |||||| |||||||||||||||||||| ||||||||||| | Sbjct: 593 gcctccctgcgatgcatctgaagtttgatctaccagcaccttttgttctgcacacagact 652 Query: 575 gccctcactactggcgcttccatcttcctggtgag 609 |||||||||||||||||||| ||||||||||||| Sbjct: 653 gccctcactactggcgcttcggtcttcctggtgag 687
>dbj|AK100259.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062G17, full insert sequence Length = 1906 Score = 428 bits (216), Expect = e-117 Identities = 485/575 (84%) Strand = Plus / Plus Query: 35 actcaaccgnacgaaaagggtttaaggggcatggcatgttggcaccattcacagctggat 94 ||||||||| | |||| ||||||||||| || |||| ||||||||||||| || |||| Sbjct: 379 actcaaccgaaggaaatgggtttaagggacactccatgctggcaccattcactgccggat 438 Query: 95 ggcagagcaatgatgtgcatccgctggttattgagagatctgagggttcttatgtttatg 154 |||| || || || | || || ||||||| ||||| |||||||||||||| |||| Sbjct: 439 ggcactccacagacctggagcccttgattattgaaagatcagagggttcttatgtctatg 498 Query: 155 acatcaatgggaataagtatctagattctctagcaggactgtggtgtacagctttaggtg 214 | | ||| ||||| ||||| | ||| | ||||||||| ||||||||||||| ||||||| Sbjct: 499 atagcaaggggaacaagtacttggatacactagcaggattgtggtgtacagccttaggtg 558 Query: 215 gtagtgagcctcgattagtcaaagctgcaactgaccagttaaacaagttacccttctatc 274 | ||||||||||| ||||| ||||| ||||| ||||| ||||||||||| || ||||| | Sbjct: 559 gcagtgagcctcggttagtgaaagcagcaaccgaccaattaaacaagttgccgttctacc 618 Query: 275 actccttctggaatcgtacaaccaaaccaacattggatcttgcagatgaccttcttagca 334 ||||||| ||||| ||||| |||| ||| ||||||||||||| || || ||| | |||| Sbjct: 619 actccttttggaacagtacagccaagccaccattggatcttgctgaggaacttatcagca 678 Query: 335 tgttcactgcaaacaaaatgggaaaggcattcttcacaaacagtggttcggaagcaaacg 394 |||||||||| || |||||||||| | ||||| |||||||| ||||| |||||||| | Sbjct: 679 tgttcactgccaaggaaatgggaaaagtgttctttacaaacagcggttctgaagcaaatg 738 Query: 395 actcacaggtcaaactagtatggtattataacaatgcattggggaggccaaacaagaaga 454 |||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||| | Sbjct: 739 actctcaggtcaaactagtatggtactataacaatgcattggggagaccaaacaagaaaa 798 Query: 455 agtttattgcacgaacaaaagcatatcatggatcaacgttaatatcagctagtctcactg 514 || | ||||||| | || |||||||||| |||||||| ||||||||||||||||| ||| Sbjct: 799 agatcattgcacaatcacaagcatatcacggatcaacattaatatcagctagtctgtctg 858 Query: 515 gtcttcctgccctgcaccagaagttcgatctaccagcaccttttgtactgcacacagatt 574 | || ||||| |||| | |||||| |||||||||||||||||||| ||||||||||| | Sbjct: 859 gcctccctgcgatgcatctgaagtttgatctaccagcaccttttgttctgcacacagact 918 Query: 575 gccctcactactggcgcttccatcttcctggtgag 609 |||||||||||||||||||| ||||||||||||| Sbjct: 919 gccctcactactggcgcttcggtcttcctggtgag 953
>ref|XM_463843.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1452 Score = 359 bits (181), Expect = 7e-96 Identities = 415/493 (84%) Strand = Plus / Plus Query: 118 ctggttattgagagatctgagggttcttatgtttatgacatcaatgggaataagtatcta 177 ||||||||||||||||||||||| | ||| ||||| || |||| |||| ||||||||| Sbjct: 151 ctggttattgagagatctgagggatgttacgtttacgatgtcaacgggaccaagtatcta 210 Query: 178 gattctctagcaggactgtggtgtacagctttaggtggtagtgagcctcgattagtcaaa 237 ||| | || |||||| ||| || ||||||||||||||||||||||||||| ||||||||| Sbjct: 211 gatgcacttgcaggattgttgtctacagctttaggtggtagtgagcctcgtttagtcaaa 270 Query: 238 gctgcaactgaccagttaaacaagttacccttctatcactccttctggaatcgtacaacc 297 ||||| || || || |||||||||||||||||||| |||||||| ||||| | ||||||| Sbjct: 271 gctgctacggagcaattaaacaagttacccttctaccactccttttggaaccatacaacc 330 Query: 298 aaaccaacattggatcttgcagatgaccttcttagcatgttcactgcaaacaaaatggga 357 | || | ||||||||||| | || ||| |||||||||| ||||| | ||||||| Sbjct: 331 aggccttctttggatcttgcgaaagaacttattagcatgtttactgccagggaaatgggc 390 Query: 358 aaggcattcttcacaaacagtggttcggaagcaaacgactcacaggtcaaactagtatgg 417 || | ||||| || ||||||||||| |||||||| ||||| ||||| || |||||||| Sbjct: 391 aaagtgttctttacgaacagtggttcagaagcaaatgactctcaggttaagatagtatgg 450 Query: 418 tattataacaatgcattggggaggccaaacaagaagaagtttattgcacgaacaaaagca 477 ||||||||||||||||||||||||||||| ||||| || | ||| |||| ||| || || Sbjct: 451 tattataacaatgcattggggaggccaaagaagaaaaatatcatttcacggacacaatca 510 Query: 478 tatcatggatcaacgttaatatcagctagtctcactggtcttcctgccctgcaccagaag 537 ||||||||| |||| || |||||||||||||| | ||||||||| || |||| ||| | Sbjct: 511 tatcatggaacaacattcatatcagctagtctatcaggtcttcctaccttgcatcaggat 570 Query: 538 ttcgatctaccagcaccttttgtactgcacacagattgccctcactactggcgcttccat 597 || ||||| |||| || |||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 571 tttgatctgccaggacgttttgttctgcacacagactgccctcactactggcgcttccat 630 Query: 598 cttcctggtgaga 610 || |||||||||| Sbjct: 631 ctccctggtgaga 643
>gb|AF324485.1|AF324485 Oryza sativa aminotransferase-like protein mRNA, complete cds Length = 1632 Score = 351 bits (177), Expect = 2e-93 Identities = 414/493 (83%) Strand = Plus / Plus Query: 118 ctggttattgagagatctgagggttcttatgtttatgacatcaatgggaataagtatcta 177 ||||||||||||||||||||||| | ||| ||||| || |||| |||| ||||||||| Sbjct: 171 ctggttattgagagatctgagggatgttacgtttacgatgtcaacgggaccaagtatcta 230 Query: 178 gattctctagcaggactgtggtgtacagctttaggtggtagtgagcctcgattagtcaaa 237 ||| | || |||||| ||| || ||||||||||||||||||||||||||| ||||||||| Sbjct: 231 gatgcacttgcaggattgttgtctacagctttaggtggtagtgagcctcgtttagtcaaa 290 Query: 238 gctgcaactgaccagttaaacaagttacccttctatcactccttctggaatcgtacaacc 297 ||||| || || || |||||||||||||||||||| |||||||| ||||| | ||||||| Sbjct: 291 gctgctacggagcaattaaacaagttacccttctaccactccttttggaaccatacaacc 350 Query: 298 aaaccaacattggatcttgcagatgaccttcttagcatgttcactgcaaacaaaatggga 357 | || | ||||||||||| | || ||| |||||||||| ||||| | ||||||| Sbjct: 351 aggccttctttggatcttgcgaaagaacttattagcatgtttactgccagggaaatgggc 410 Query: 358 aaggcattcttcacaaacagtggttcggaagcaaacgactcacaggtcaaactagtatgg 417 || | ||||| || ||||||||||| |||||||| ||||| ||||| || |||||||| Sbjct: 411 aaagtgttctttacgaacagtggttcagaagcaaatgactctcaggttaagatagtatgg 470 Query: 418 tattataacaatgcattggggaggccaaacaagaagaagtttattgcacgaacaaaagca 477 ||||||||||||||||||||||||||||| ||||| || | ||| |||| ||| || || Sbjct: 471 tattataacaatgcattggggaggccaaagaagaaaaatatcatttcacggacacaatca 530 Query: 478 tatcatggatcaacgttaatatcagctagtctcactggtcttcctgccctgcaccagaag 537 ||||||||| |||| || |||||||||||||| | || |||||| || |||| ||| | Sbjct: 531 tatcatggaacaacattcatatcagctagtctatcagggcttcctaccttgcatcaggat 590 Query: 538 ttcgatctaccagcaccttttgtactgcacacagattgccctcactactggcgcttccat 597 || ||||| |||| || |||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 591 tttgatctgccaggacgttttgttctgcacacagactgccctcactactggcgcttccat 650 Query: 598 cttcctggtgaga 610 || |||||||||| Sbjct: 651 ctccctggtgaga 663
>dbj|AK061967.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-G12, full insert sequence Length = 1513 Score = 325 bits (164), Expect = 1e-85 Identities = 296/340 (87%) Strand = Plus / Plus Query: 269 tctatcactccttctggaatcgtacaaccaaaccaacattggatcttgcagatgaccttc 328 ||||||||||||| ||||| ||||| ||||||||| | ||||||||||| | || || | Sbjct: 1 tctatcactccttttggaaccgtacgaccaaaccatctctggatcttgcaaaggaactgc 60 Query: 329 ttagcatgttcactgcaaacaaaatgggaaaggcattcttcacaaacagtggttcggaag 388 |||||||||||||||||| |||||||||| | ||||||||||| |||||||| |||| Sbjct: 61 ttagcatgttcactgcaagggaaatgggaaaagtgttcttcacaaatagtggttcagaag 120 Query: 389 caaacgactcacaggtcaaactagtatggtattataacaatgcattggggaggccaaaca 448 |||| || || ||||| ||||| || |||||||||||||||||| |||| |||||| ||| Sbjct: 121 caaatgattctcaggtaaaactggtctggtattataacaatgcactgggaaggccagaca 180 Query: 449 agaagaagtttattgcacgaacaaaagcatatcatggatcaacgttaatatcagctagtc 508 ||||||| |||||||||||| ||||| |||| ||||||||||| ||||||||||||||| Sbjct: 181 agaagaaatttattgcacgatcaaaatcataccatggatcaacactaatatcagctagtc 240 Query: 509 tcactggtcttcctgccctgcaccagaagttcgatctaccagcaccttttgtactgcaca 568 | | ||||||||||| ||||| |||||||| ||||| || ||||||||||| ||||||| Sbjct: 241 tatccggtcttcctgcactgcatcagaagtttgatctgcctgcaccttttgttctgcaca 300 Query: 569 cagattgccctcactactggcgcttccatcttcctggtga 608 | || ||||||||||||||||||||||||||||||||||| Sbjct: 301 cggactgccctcactactggcgcttccatcttcctggtga 340
>gb|BT018487.1| Zea mays clone EL01N0424F04.d mRNA sequence Length = 1851 Score = 260 bits (131), Expect = 5e-66 Identities = 191/211 (90%) Strand = Plus / Plus Query: 400 caggtcaaactagtatggtattataacaatgcattggggaggccaaacaagaagaagttt 459 ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||| Sbjct: 497 caggtcaaactagtatggtattataacaacgcattggggaggccagacaagaagaaattt 556 Query: 460 attgcacgaacaaaagcatatcatggatcaacgttaatatcagctagtctcactggtctt 519 ||||||||| |||||||||| |||||||| || | |||||||| || || ||||||||| Sbjct: 557 attgcacgatcaaaagcataccatggatctacactgatatcagcgagcctaactggtctt 616 Query: 520 cctgccctgcaccagaagttcgatctaccagcaccttttgtactgcacacagattgccct 579 |||||||||| ||||||||| |||||||||||||||||||| |||||||| || |||||| Sbjct: 617 cctgccctgccccagaagtttgatctaccagcaccttttgttctgcacactgactgccct 676 Query: 580 cactactggcgcttccatcttcctggtgaga 610 ||||||||||| | |||||||||||||||| Sbjct: 677 cactactggcgatatcatcttcctggtgaga 707
>gb|BT019169.1| Zea mays clone Contig837.F mRNA sequence Length = 1370 Score = 178 bits (90), Expect = 1e-41 Identities = 147/166 (88%) Strand = Plus / Plus Query: 137 agggttcttatgtttatgacatcaatgggaataagtatctagattctctagcaggactgt 196 ||||||| ||||| |||||||| |||||||| |||||||| || |||||||||||| | | Sbjct: 139 agggttcctatgtctatgacattaatgggaacaagtatctggactctctagcaggattat 198 Query: 197 ggtgtacagctttaggtggtagtgagcctcgattagtcaaagctgcaactgaccagttaa 256 |||| ||| ||||||||||||| |||||||||||||||||||| |||||||| || |||| Sbjct: 199 ggtgcacaactttaggtggtagcgagcctcgattagtcaaagcagcaactgagcaattaa 258 Query: 257 acaagttacccttctatcactccttctggaatcgtacaaccaaacc 302 |||| ||||||||||| || ||||||||||| |||||||| ||||| Sbjct: 259 acaaattacccttctaccattccttctggaaccgtacaacaaaacc 304
>gb|AY240231.1| Lycopersicon esculentum gamma-aminobutyrate transaminase subunit precursor isozyme 3 mRNA, complete cds Length = 1786 Score = 157 bits (79), Expect = 5e-35 Identities = 214/259 (82%) Strand = Plus / Plus Query: 340 actgcaaacaaaatgggaaaggcattcttcacaaacagtggttcggaagcaaacgactca 399 |||||||| ||||||| || || || ||||||||||| || || ||||| || ||| || Sbjct: 677 actgcaaataaaatggcgaaagcttttttcacaaacagcggatcagaagccaatgacaca 736 Query: 400 caggtcaaactagtatggtattataacaatgcattggggaggccaaacaagaagaagttt 459 ||||| ||||| ||||||||||| ||||||||| | ||||||||| |||| ||||| ||| Sbjct: 737 caggtgaaactggtatggtattacaacaatgcactcgggaggccagacaaaaagaaattt 796 Query: 460 attgcacgaacaaaagcatatcatggatcaacgttaatatcagctagtctcactggtctt 519 ||||| ||||||||| |||| || |||||||| | || || ||||||||| |||||||| Sbjct: 797 attgctcgaacaaaatcataccacggatcaactctcatttccgctagtctctctggtctt 856 Query: 520 cctgccctgcaccagaagttcgatctaccagcaccttttgtactgcacacagattgccct 579 ||||| || || ||| | |||||||||||||| || ||||| ||||| || || |||||| Sbjct: 857 cctgcactacatcagcaattcgatctaccagctccgtttgttctgcatactgactgccct 916 Query: 580 cactactggcgcttccatc 598 || | |||||||| |||| Sbjct: 917 catttttggcgctttcatc 935 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 58 aaggggcatggcatgttggcaccattcacagctggatggca 98 |||||||||| ||||||||||| |||||||| |||||||| Sbjct: 395 aaggggcatgatatgttggcacccttcacagccggatggca 435
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 127 bits (64), Expect = 5e-26 Identities = 85/92 (92%) Strand = Plus / Minus Query: 515 gtcttcctgccctgcaccagaagttcgatctaccagcaccttttgtactgcacacagatt 574 |||||||||| || ||||| ||||| ||||| ||||| |||||||| ||||||||||||| Sbjct: 6166549 gtcttcctgctcttcaccaaaagtttgatctgccagctccttttgttctgcacacagatt 6166490 Query: 575 gccctcactactggcgcttccatcttcctggt 606 |||||||||||||||||||||||||||||||| Sbjct: 6166489 gccctcactactggcgcttccatcttcctggt 6166458 Score = 101 bits (51), Expect = 3e-18 Identities = 78/87 (89%) Strand = Plus / Minus Query: 53 ggtttaaggggcatggcatgttggcaccattcacagctggatggcagagcaatgatgtgc 112 |||| ||||||||||||||| |||| |||||||| |||||||||||||||| ||| ||| Sbjct: 6168407 ggttcaaggggcatggcatgctggccccattcactgctggatggcagagcaccgatttgc 6168348 Query: 113 atccgctggttattgagagatctgagg 139 |||| ||||||||||| |||||||||| Sbjct: 6168347 atcctctggttattgacagatctgagg 6168321 Score = 97.6 bits (49), Expect = 4e-17 Identities = 82/93 (88%) Strand = Plus / Minus Query: 210 aggtggtagtgagcctcgattagtcaaagctgcaactgaccagttaaacaagttaccctt 269 |||||||| |||||||||||| |||||||||||||||| || || ||||| |||||||| Sbjct: 6167919 aggtggtaatgagcctcgattgatcaaagctgcaactgatcaattgaacaaattaccctt 6167860 Query: 270 ctatcactccttctggaatcgtacaaccaaacc 302 ||| |||||||| ||||| ||||| |||||||| Sbjct: 6167859 ctaccactccttttggaaccgtactaccaaacc 6167827 Score = 73.8 bits (37), Expect = 6e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 399 acaggtcaaactagtatggtattataacaatgcattggggaggccaaacaagaagaagtt 458 |||||| || ||||| ||||||||||||||||||||||| || || ||||||||||| || Sbjct: 6167210 acaggtaaagctagtttggtattataacaatgcattgggaagacctaacaagaagaaatt 6167151 Query: 459 tattgcacg 467 ||| ||||| Sbjct: 6167150 tatcgcacg 6167142 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 137 agggttcttatgtttatgacatcaatgggaataagtatctagattctctagcaggactgt 196 |||||||||| |||||||| ||||||||||| ||||| ||||| |||| |||||| ||| Sbjct: 6168174 agggttcttacgtttatgatatcaatgggaagaagtacatagatgctcttgcaggattgt 6168115 Query: 197 ggt 199 ||| Sbjct: 6168114 ggt 6168112 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Minus Query: 309 ggatcttgcagatgaccttcttagcatgttcactgcaaacaaaatgggaaaggcattctt 368 ||||||||| |||| |||| |||||||||||||||| |||||||||| |||||| Sbjct: 6167589 ggatcttgctaatgaaattctcagcatgttcactgcaagggaaatgggaaaaatattctt 6167530 Query: 369 cacaaacagtggttcggaagcaaa 392 ||||| |||||||| |||||||| Sbjct: 6167529 tacaaatagtggttcagaagcaaa 6167506
>dbj|AP003875.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1119_C05 Length = 126112 Score = 127 bits (64), Expect = 5e-26 Identities = 85/92 (92%) Strand = Plus / Minus Query: 515 gtcttcctgccctgcaccagaagttcgatctaccagcaccttttgtactgcacacagatt 574 |||||||||| || ||||| ||||| ||||| ||||| |||||||| ||||||||||||| Sbjct: 29942 gtcttcctgctcttcaccaaaagtttgatctgccagctccttttgttctgcacacagatt 29883 Query: 575 gccctcactactggcgcttccatcttcctggt 606 |||||||||||||||||||||||||||||||| Sbjct: 29882 gccctcactactggcgcttccatcttcctggt 29851 Score = 101 bits (51), Expect = 3e-18 Identities = 78/87 (89%) Strand = Plus / Minus Query: 53 ggtttaaggggcatggcatgttggcaccattcacagctggatggcagagcaatgatgtgc 112 |||| ||||||||||||||| |||| |||||||| |||||||||||||||| ||| ||| Sbjct: 31800 ggttcaaggggcatggcatgctggccccattcactgctggatggcagagcaccgatttgc 31741 Query: 113 atccgctggttattgagagatctgagg 139 |||| ||||||||||| |||||||||| Sbjct: 31740 atcctctggttattgacagatctgagg 31714 Score = 97.6 bits (49), Expect = 4e-17 Identities = 82/93 (88%) Strand = Plus / Minus Query: 210 aggtggtagtgagcctcgattagtcaaagctgcaactgaccagttaaacaagttaccctt 269 |||||||| |||||||||||| |||||||||||||||| || || ||||| |||||||| Sbjct: 31312 aggtggtaatgagcctcgattgatcaaagctgcaactgatcaattgaacaaattaccctt 31253 Query: 270 ctatcactccttctggaatcgtacaaccaaacc 302 ||| |||||||| ||||| ||||| |||||||| Sbjct: 31252 ctaccactccttttggaaccgtactaccaaacc 31220 Score = 73.8 bits (37), Expect = 6e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 399 acaggtcaaactagtatggtattataacaatgcattggggaggccaaacaagaagaagtt 458 |||||| || ||||| ||||||||||||||||||||||| || || ||||||||||| || Sbjct: 30603 acaggtaaagctagtttggtattataacaatgcattgggaagacctaacaagaagaaatt 30544 Query: 459 tattgcacg 467 ||| ||||| Sbjct: 30543 tatcgcacg 30535 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 137 agggttcttatgtttatgacatcaatgggaataagtatctagattctctagcaggactgt 196 |||||||||| |||||||| ||||||||||| ||||| ||||| |||| |||||| ||| Sbjct: 31567 agggttcttacgtttatgatatcaatgggaagaagtacatagatgctcttgcaggattgt 31508 Query: 197 ggt 199 ||| Sbjct: 31507 ggt 31505 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Minus Query: 309 ggatcttgcagatgaccttcttagcatgttcactgcaaacaaaatgggaaaggcattctt 368 ||||||||| |||| |||| |||||||||||||||| |||||||||| |||||| Sbjct: 30982 ggatcttgctaatgaaattctcagcatgttcactgcaagggaaatgggaaaaatattctt 30923 Query: 369 cacaaacagtggttcggaagcaaa 392 ||||| |||||||| |||||||| Sbjct: 30922 tacaaatagtggttcagaagcaaa 30899
>dbj|AP004565.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0486F07 Length = 154926 Score = 127 bits (64), Expect = 5e-26 Identities = 85/92 (92%) Strand = Plus / Minus Query: 515 gtcttcctgccctgcaccagaagttcgatctaccagcaccttttgtactgcacacagatt 574 |||||||||| || ||||| ||||| ||||| ||||| |||||||| ||||||||||||| Sbjct: 122566 gtcttcctgctcttcaccaaaagtttgatctgccagctccttttgttctgcacacagatt 122507 Query: 575 gccctcactactggcgcttccatcttcctggt 606 |||||||||||||||||||||||||||||||| Sbjct: 122506 gccctcactactggcgcttccatcttcctggt 122475 Score = 101 bits (51), Expect = 3e-18 Identities = 78/87 (89%) Strand = Plus / Minus Query: 53 ggtttaaggggcatggcatgttggcaccattcacagctggatggcagagcaatgatgtgc 112 |||| ||||||||||||||| |||| |||||||| |||||||||||||||| ||| ||| Sbjct: 124424 ggttcaaggggcatggcatgctggccccattcactgctggatggcagagcaccgatttgc 124365 Query: 113 atccgctggttattgagagatctgagg 139 |||| ||||||||||| |||||||||| Sbjct: 124364 atcctctggttattgacagatctgagg 124338 Score = 97.6 bits (49), Expect = 4e-17 Identities = 82/93 (88%) Strand = Plus / Minus Query: 210 aggtggtagtgagcctcgattagtcaaagctgcaactgaccagttaaacaagttaccctt 269 |||||||| |||||||||||| |||||||||||||||| || || ||||| |||||||| Sbjct: 123936 aggtggtaatgagcctcgattgatcaaagctgcaactgatcaattgaacaaattaccctt 123877 Query: 270 ctatcactccttctggaatcgtacaaccaaacc 302 ||| |||||||| ||||| ||||| |||||||| Sbjct: 123876 ctaccactccttttggaaccgtactaccaaacc 123844 Score = 73.8 bits (37), Expect = 6e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 399 acaggtcaaactagtatggtattataacaatgcattggggaggccaaacaagaagaagtt 458 |||||| || ||||| ||||||||||||||||||||||| || || ||||||||||| || Sbjct: 123227 acaggtaaagctagtttggtattataacaatgcattgggaagacctaacaagaagaaatt 123168 Query: 459 tattgcacg 467 ||| ||||| Sbjct: 123167 tatcgcacg 123159 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 137 agggttcttatgtttatgacatcaatgggaataagtatctagattctctagcaggactgt 196 |||||||||| |||||||| ||||||||||| ||||| ||||| |||| |||||| ||| Sbjct: 124191 agggttcttacgtttatgatatcaatgggaagaagtacatagatgctcttgcaggattgt 124132 Query: 197 ggt 199 ||| Sbjct: 124131 ggt 124129 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Minus Query: 309 ggatcttgcagatgaccttcttagcatgttcactgcaaacaaaatgggaaaggcattctt 368 ||||||||| |||| |||| |||||||||||||||| |||||||||| |||||| Sbjct: 123606 ggatcttgctaatgaaattctcagcatgttcactgcaagggaaatgggaaaaatattctt 123547 Query: 369 cacaaacagtggttcggaagcaaa 392 ||||| |||||||| |||||||| Sbjct: 123546 tacaaatagtggttcagaagcaaa 123523
>emb|AL662950.2|OSJN00152 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0008M17, complete sequence Length = 133279 Score = 123 bits (62), Expect = 7e-25 Identities = 86/94 (91%) Strand = Plus / Plus Query: 210 aggtggtagtgagcctcgattagtcaaagctgcaactgaccagttaaacaagttaccctt 269 |||||||||||| |||||||||||||||||||||||||| || ||| ||||||| ||||| Sbjct: 33753 aggtggtagtgaacctcgattagtcaaagctgcaactgagcaattacacaagttgccctt 33812 Query: 270 ctatcactccttctggaatcgtacaaccaaacca 303 |||||||||||| ||||| ||||| ||||||||| Sbjct: 33813 ctatcactccttttggaaccgtacgaccaaacca 33846 Score = 119 bits (60), Expect = 1e-23 Identities = 84/92 (91%) Strand = Plus / Plus Query: 515 gtcttcctgccctgcaccagaagttcgatctaccagcaccttttgtactgcacacagatt 574 |||||||||| ||||| |||||||| ||||| || ||||||||||| |||||||| || | Sbjct: 35010 gtcttcctgcactgcatcagaagtttgatctgcctgcaccttttgttctgcacacggact 35069 Query: 575 gccctcactactggcgcttccatcttcctggt 606 |||||||||||||||||||||||||||||||| Sbjct: 35070 gccctcactactggcgcttccatcttcctggt 35101 Score = 105 bits (53), Expect = 2e-19 Identities = 68/73 (93%) Strand = Plus / Plus Query: 534 gaagttcgatctaccagcaccttttgtactgcacacagattgccctcactactggcgctt 593 |||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 27299 gaagtttgatctaccagcaccttttgttctgcacacagactgccctcactactggcgctt 27358 Query: 594 ccatcttcctggt 606 | |||||||||| Sbjct: 27359 cggtcttcctggt 27371 Score = 101 bits (51), Expect = 3e-18 Identities = 78/87 (89%) Strand = Plus / Plus Query: 53 ggtttaaggggcatggcatgttggcaccattcacagctggatggcagagcaatgatgtgc 112 |||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||| | Sbjct: 33325 ggttcaaggggcatggcatgttggcaccattcacagctggttggcagagcaccgatgttc 33384 Query: 113 atccgctggttattgagagatctgagg 139 ||||| | || ||||| |||||||||| Sbjct: 33385 atccgttagtcattgaaagatctgagg 33411 Score = 93.7 bits (47), Expect = 6e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 400 caggtcaaactagtatggtattataacaatgcattggggaggccaaacaagaagaagttt 459 |||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||| | Sbjct: 26679 caggtcaaactagtatggtactataacaatgcattggggagaccaaacaagaaaaagatc 26738 Query: 460 attgcac 466 ||||||| Sbjct: 26739 attgcac 26745 Score = 87.7 bits (44), Expect = 4e-14 Identities = 68/76 (89%) Strand = Plus / Plus Query: 399 acaggtcaaactagtatggtattataacaatgcattggggaggccaaacaagaagaagtt 458 |||||| ||||| || |||||||||||||||||| |||| |||||| |||||||||| || Sbjct: 34569 acaggtaaaactggtctggtattataacaatgcactgggaaggccagacaagaagaaatt 34628 Query: 459 tattgcacgaacaaaa 474 |||||||||| ||||| Sbjct: 34629 tattgcacgatcaaaa 34644 Score = 81.8 bits (41), Expect = 2e-12 Identities = 86/101 (85%) Strand = Plus / Plus Query: 210 aggtggtagtgagcctcgattagtcaaagctgcaactgaccagttaaacaagttaccctt 269 |||||| ||||||||||| ||||| ||||| ||||| ||||| ||||||||||| || || Sbjct: 25689 aggtggcagtgagcctcggttagtgaaagcagcaaccgaccaattaaacaagttgccgtt 25748 Query: 270 ctatcactccttctggaatcgtacaaccaaaccaacattgg 310 ||| |||||||| ||||| ||||| |||| ||| |||||| Sbjct: 25749 ctaccactccttttggaacagtacagccaagccaccattgg 25789 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 137 agggttcttatgtttatgacatcaatgggaataagtatctagattctctagcaggactgt 196 ||||||| ||||| ||||| ||| | || || ||||||||||||||||| || ||||| | Sbjct: 33551 agggttcgtatgtatatgatatcgacggaaagaagtatctagattctcttgcgggactat 33610 Query: 197 ggtgtacagctttaggt 213 ||||||||||||||||| Sbjct: 33611 ggtgtacagctttaggt 33627 Score = 71.9 bits (36), Expect = 2e-09 Identities = 72/84 (85%) Strand = Plus / Plus Query: 309 ggatcttgcagatgaccttcttagcatgttcactgcaaacaaaatgggaaaggcattctt 368 |||||||||| | || || ||||||||||||||||||| |||||||||| | ||||| Sbjct: 33985 ggatcttgcaaaggaactgcttagcatgttcactgcaagggaaatgggaaaagtgttctt 34044 Query: 369 cacaaacagtggttcggaagcaaa 392 |||||| |||||||| |||||||| Sbjct: 34045 cacaaatagtggttcagaagcaaa 34068 Score = 63.9 bits (32), Expect = 6e-07 Identities = 80/96 (83%) Strand = Plus / Plus Query: 309 ggatcttgcagatgaccttcttagcatgttcactgcaaacaaaatgggaaaggcattctt 368 ||||||||| || || ||| | |||||||||||||| || |||||||||| | ||||| Sbjct: 25956 ggatcttgctgaggaacttatcagcatgttcactgccaaggaaatgggaaaagtgttctt 26015 Query: 369 cacaaacagtggttcggaagcaaacgactcacaggt 404 |||||||| ||||| |||||||| ||||| ||||| Sbjct: 26016 tacaaacagcggttctgaagcaaatgactctcaggt 26051 Score = 58.0 bits (29), Expect = 4e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 137 agggttcttatgtttatgacatcaatgggaataagtatctagattctctagcaggactgt 196 ||||||||||||| ||||| | ||| ||||| ||||| | ||| | ||||||||| ||| Sbjct: 25512 agggttcttatgtctatgatagcaaggggaacaagtacttggatacactagcaggattgt 25571 Query: 197 ggtgtacagctttaggt 213 |||||||||| |||||| Sbjct: 25572 ggtgtacagccttaggt 25588 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 477 atatcatggatcaacgttaatatcagctagtct 509 |||||| |||||||| ||||||||||||||||| Sbjct: 27080 atatcacggatcaacattaatatcagctagtct 27112 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 481 catggatcaacgttaatatcagctagtct 509 ||||||||||| |||||||||||||||| Sbjct: 34863 catggatcaacactaatatcagctagtct 34891
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 123 bits (62), Expect = 7e-25 Identities = 86/94 (91%) Strand = Plus / Plus Query: 210 aggtggtagtgagcctcgattagtcaaagctgcaactgaccagttaaacaagttaccctt 269 |||||||||||| |||||||||||||||||||||||||| || ||| ||||||| ||||| Sbjct: 31212152 aggtggtagtgaacctcgattagtcaaagctgcaactgagcaattacacaagttgccctt 31212211 Query: 270 ctatcactccttctggaatcgtacaaccaaacca 303 |||||||||||| ||||| ||||| ||||||||| Sbjct: 31212212 ctatcactccttttggaaccgtacgaccaaacca 31212245 Score = 119 bits (60), Expect = 1e-23 Identities = 84/92 (91%) Strand = Plus / Plus Query: 515 gtcttcctgccctgcaccagaagttcgatctaccagcaccttttgtactgcacacagatt 574 |||||||||| ||||| |||||||| ||||| || ||||||||||| |||||||| || | Sbjct: 31213409 gtcttcctgcactgcatcagaagtttgatctgcctgcaccttttgttctgcacacggact 31213468 Query: 575 gccctcactactggcgcttccatcttcctggt 606 |||||||||||||||||||||||||||||||| Sbjct: 31213469 gccctcactactggcgcttccatcttcctggt 31213500 Score = 105 bits (53), Expect = 2e-19 Identities = 68/73 (93%) Strand = Plus / Plus Query: 534 gaagttcgatctaccagcaccttttgtactgcacacagattgccctcactactggcgctt 593 |||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 31205698 gaagtttgatctaccagcaccttttgttctgcacacagactgccctcactactggcgctt 31205757 Query: 594 ccatcttcctggt 606 | |||||||||| Sbjct: 31205758 cggtcttcctggt 31205770 Score = 101 bits (51), Expect = 3e-18 Identities = 78/87 (89%) Strand = Plus / Plus Query: 53 ggtttaaggggcatggcatgttggcaccattcacagctggatggcagagcaatgatgtgc 112 |||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||| | Sbjct: 31211724 ggttcaaggggcatggcatgttggcaccattcacagctggttggcagagcaccgatgttc 31211783 Query: 113 atccgctggttattgagagatctgagg 139 ||||| | || ||||| |||||||||| Sbjct: 31211784 atccgttagtcattgaaagatctgagg 31211810 Score = 93.7 bits (47), Expect = 6e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 400 caggtcaaactagtatggtattataacaatgcattggggaggccaaacaagaagaagttt 459 |||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||| | Sbjct: 31205078 caggtcaaactagtatggtactataacaatgcattggggagaccaaacaagaaaaagatc 31205137 Query: 460 attgcac 466 ||||||| Sbjct: 31205138 attgcac 31205144 Score = 87.7 bits (44), Expect = 4e-14 Identities = 68/76 (89%) Strand = Plus / Plus Query: 399 acaggtcaaactagtatggtattataacaatgcattggggaggccaaacaagaagaagtt 458 |||||| ||||| || |||||||||||||||||| |||| |||||| |||||||||| || Sbjct: 31212968 acaggtaaaactggtctggtattataacaatgcactgggaaggccagacaagaagaaatt 31213027 Query: 459 tattgcacgaacaaaa 474 |||||||||| ||||| Sbjct: 31213028 tattgcacgatcaaaa 31213043 Score = 81.8 bits (41), Expect = 2e-12 Identities = 86/101 (85%) Strand = Plus / Plus Query: 210 aggtggtagtgagcctcgattagtcaaagctgcaactgaccagttaaacaagttaccctt 269 |||||| ||||||||||| ||||| ||||| ||||| ||||| ||||||||||| || || Sbjct: 31204088 aggtggcagtgagcctcggttagtgaaagcagcaaccgaccaattaaacaagttgccgtt 31204147 Query: 270 ctatcactccttctggaatcgtacaaccaaaccaacattgg 310 ||| |||||||| ||||| ||||| |||| ||| |||||| Sbjct: 31204148 ctaccactccttttggaacagtacagccaagccaccattgg 31204188 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 137 agggttcttatgtttatgacatcaatgggaataagtatctagattctctagcaggactgt 196 ||||||| ||||| ||||| ||| | || || ||||||||||||||||| || ||||| | Sbjct: 31211950 agggttcgtatgtatatgatatcgacggaaagaagtatctagattctcttgcgggactat 31212009 Query: 197 ggtgtacagctttaggt 213 ||||||||||||||||| Sbjct: 31212010 ggtgtacagctttaggt 31212026 Score = 71.9 bits (36), Expect = 2e-09 Identities = 72/84 (85%) Strand = Plus / Plus Query: 309 ggatcttgcagatgaccttcttagcatgttcactgcaaacaaaatgggaaaggcattctt 368 |||||||||| | || || ||||||||||||||||||| |||||||||| | ||||| Sbjct: 31212384 ggatcttgcaaaggaactgcttagcatgttcactgcaagggaaatgggaaaagtgttctt 31212443 Query: 369 cacaaacagtggttcggaagcaaa 392 |||||| |||||||| |||||||| Sbjct: 31212444 cacaaatagtggttcagaagcaaa 31212467 Score = 63.9 bits (32), Expect = 6e-07 Identities = 80/96 (83%) Strand = Plus / Plus Query: 309 ggatcttgcagatgaccttcttagcatgttcactgcaaacaaaatgggaaaggcattctt 368 ||||||||| || || ||| | |||||||||||||| || |||||||||| | ||||| Sbjct: 31204355 ggatcttgctgaggaacttatcagcatgttcactgccaaggaaatgggaaaagtgttctt 31204414 Query: 369 cacaaacagtggttcggaagcaaacgactcacaggt 404 |||||||| ||||| |||||||| ||||| ||||| Sbjct: 31204415 tacaaacagcggttctgaagcaaatgactctcaggt 31204450 Score = 58.0 bits (29), Expect = 4e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 137 agggttcttatgtttatgacatcaatgggaataagtatctagattctctagcaggactgt 196 ||||||||||||| ||||| | ||| ||||| ||||| | ||| | ||||||||| ||| Sbjct: 31203911 agggttcttatgtctatgatagcaaggggaacaagtacttggatacactagcaggattgt 31203970 Query: 197 ggtgtacagctttaggt 213 |||||||||| |||||| Sbjct: 31203971 ggtgtacagccttaggt 31203987 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 477 atatcatggatcaacgttaatatcagctagtct 509 |||||| |||||||| ||||||||||||||||| Sbjct: 31205479 atatcacggatcaacattaatatcagctagtct 31205511 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 481 catggatcaacgttaatatcagctagtct 509 ||||||||||| |||||||||||||||| Sbjct: 31213262 catggatcaacactaatatcagctagtct 31213290
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 105 bits (53), Expect = 2e-19 Identities = 80/89 (89%) Strand = Plus / Minus Query: 210 aggtggtagtgagcctcgattagtcaaagctgcaactgaccagttaaacaagttaccctt 269 |||||||||||||||||| |||||||||||||| || || || ||||||||||||||||| Sbjct: 687302 aggtggtagtgagcctcgtttagtcaaagctgctacggagcaattaaacaagttaccctt 687243 Query: 270 ctatcactccttctggaatcgtacaacca 298 ||| |||||||| ||||| | |||||||| Sbjct: 687242 ctaccactccttttggaaccatacaacca 687214 Score = 87.7 bits (44), Expect = 4e-14 Identities = 80/92 (86%) Strand = Plus / Minus Query: 515 gtcttcctgccctgcaccagaagttcgatctaccagcaccttttgtactgcacacagatt 574 |||||||| || |||| ||| | || ||||| |||| || |||||| ||||||||||| | Sbjct: 684436 gtcttcctaccttgcatcaggattttgatctgccaggacgttttgttctgcacacagact 684377 Query: 575 gccctcactactggcgcttccatcttcctggt 606 ||||||||||||||||||||||||| |||||| Sbjct: 684376 gccctcactactggcgcttccatctccctggt 684345 Score = 77.8 bits (39), Expect = 4e-11 Identities = 42/43 (97%) Strand = Plus / Minus Query: 410 tagtatggtattataacaatgcattggggaggccaaacaagaa 452 ||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 685184 tagtatggtattataacaatgcattggggaggccaaagaagaa 685142 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 118 ctggttattgagagatctgagg 139 |||||||||||||||||||||| Sbjct: 697002 ctggttattgagagatctgagg 696981 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Minus Query: 169 aagtatctagattctctagcaggactgtggtgtacagctttaggt 213 |||||||||||| | || |||||| ||| || ||||||||||||| Sbjct: 695283 aagtatctagatgcacttgcaggattgttgtctacagctttaggt 695239 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 364 ttcttcacaaacagtggttcggaagcaaacgactcacaggt 404 ||||| || ||||||||||| |||||||| ||||| ||||| Sbjct: 686974 ttctttacgaacagtggttcagaagcaaatgactctcaggt 686934 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 477 atatcatggatcaacgttaatatcagctagtct 509 |||||||||| |||| || |||||||||||||| Sbjct: 684589 atatcatggaacaacattcatatcagctagtct 684557
>dbj|AP004090.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1399_H05 Length = 147670 Score = 105 bits (53), Expect = 2e-19 Identities = 80/89 (89%) Strand = Plus / Minus Query: 210 aggtggtagtgagcctcgattagtcaaagctgcaactgaccagttaaacaagttaccctt 269 |||||||||||||||||| |||||||||||||| || || || ||||||||||||||||| Sbjct: 44197 aggtggtagtgagcctcgtttagtcaaagctgctacggagcaattaaacaagttaccctt 44138 Query: 270 ctatcactccttctggaatcgtacaacca 298 ||| |||||||| ||||| | |||||||| Sbjct: 44137 ctaccactccttttggaaccatacaacca 44109 Score = 87.7 bits (44), Expect = 4e-14 Identities = 80/92 (86%) Strand = Plus / Minus Query: 515 gtcttcctgccctgcaccagaagttcgatctaccagcaccttttgtactgcacacagatt 574 |||||||| || |||| ||| | || ||||| |||| || |||||| ||||||||||| | Sbjct: 41331 gtcttcctaccttgcatcaggattttgatctgccaggacgttttgttctgcacacagact 41272 Query: 575 gccctcactactggcgcttccatcttcctggt 606 ||||||||||||||||||||||||| |||||| Sbjct: 41271 gccctcactactggcgcttccatctccctggt 41240 Score = 77.8 bits (39), Expect = 4e-11 Identities = 42/43 (97%) Strand = Plus / Minus Query: 410 tagtatggtattataacaatgcattggggaggccaaacaagaa 452 ||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 42079 tagtatggtattataacaatgcattggggaggccaaagaagaa 42037 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 118 ctggttattgagagatctgagg 139 |||||||||||||||||||||| Sbjct: 53897 ctggttattgagagatctgagg 53876 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Minus Query: 169 aagtatctagattctctagcaggactgtggtgtacagctttaggt 213 |||||||||||| | || |||||| ||| || ||||||||||||| Sbjct: 52178 aagtatctagatgcacttgcaggattgttgtctacagctttaggt 52134 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 364 ttcttcacaaacagtggttcggaagcaaacgactcacaggt 404 ||||| || ||||||||||| |||||||| ||||| ||||| Sbjct: 43869 ttctttacgaacagtggttcagaagcaaatgactctcaggt 43829 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 477 atatcatggatcaacgttaatatcagctagtct 509 |||||||||| |||| || |||||||||||||| Sbjct: 41484 atatcatggaacaacattcatatcagctagtct 41452
>gb|AY240229.1| Lycopersicon esculentum gamma-aminobutyrate transaminase subunit precursor isozyme 1 mRNA, complete cds Length = 2005 Score = 101 bits (51), Expect = 3e-18 Identities = 156/191 (81%) Strand = Plus / Plus Query: 334 atgttcactgcaaacaaaatgggaaaggcattcttcacaaacagtggttcggaagcaaac 393 |||||||||||||| ||||||| ||| || || ||||| || ||||| || ||||| || Sbjct: 666 atgttcactgcaaagaaaatggcaaaagcttttttcaccaatagtggatcagaagccaat 725 Query: 394 gactcacaggtcaaactagtatggtattataacaatgcattggggaggccaaacaagaag 453 || | ||||| || || || ||||||||||||||||| | || ||||||||||| ||| Sbjct: 726 gatacccaggtgaagctggtctggtattataacaatgctcttggaaggccaaacaaaaag 785 Query: 454 aagtttattgcacgaacaaaagcatatcatggatcaacgttaatatcagctagtctcact 513 || ||||| || ||| |||||||||||||||| ||||| | || || || ||||||||| Sbjct: 786 aaatttatagctcgagcaaaagcatatcatggttcaactcttatttctgccagtctcact 845 Query: 514 ggtcttcctgc 524 || |||||||| Sbjct: 846 ggccttcctgc 856
>gb|AF085149.1|AF085149 Capsicum chinense strain habanero putative aminotransferase mRNA, complete cds Length = 1616 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 136 gagggttcttatgtttatgacatcaatgggaataagtatct 176 |||||||||||||| |||||||| |||||||| |||||||| Sbjct: 176 gagggttcttatgtctatgacataaatgggaagaagtatct 216 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Plus Query: 415 tggtattataacaatgcattggggaggccaaacaagaagaagtttattgcacgaacaaaa 474 |||||||| || ||||| | ||||||||| | || ||||| ||||||| ||| ||||| Sbjct: 455 tggtattacaataatgcccttgggaggccacagaaaaagaaaattattgctcgagcaaaa 514 Query: 475 gcatatcatgg 485 ||||||||||| Sbjct: 515 gcatatcatgg 525
>ref|NM_113117.2| Arabidopsis thaliana POP2 (POLLEN-PISTIL INCOMPATIBILITY 2); 4-aminobutyrate transaminase AT3G22200 (POP2) mRNA, complete cds Length = 1821 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 545 taccagcaccttttgtactgcacacagattgccctcactactggcgcttccatcttcc 602 |||| ||||| ||||| ||||||||||||||||||| || ||||| || |||||||| Sbjct: 766 tacctgcaccatttgtgttgcacacagattgccctcattattggcgttttcatcttcc 823
>gb|AF351125.1| Arabidopsis thaliana gamma-aminobutyrate transaminase subunit precursor, mRNA, complete cds; nuclear gene for mitochondrial product Length = 1737 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 545 taccagcaccttttgtactgcacacagattgccctcactactggcgcttccatcttcc 602 |||| ||||| ||||| ||||||||||||||||||| || ||||| || |||||||| Sbjct: 740 tacctgcaccatttgtgttgcacacagattgccctcattattggcgttttcatcttcc 797
>gb|AY142571.1| Arabidopsis thaliana putative aminotransferase (At3g22200) mRNA, complete cds Length = 1546 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 545 taccagcaccttttgtactgcacacagattgccctcactactggcgcttccatcttcc 602 |||| ||||| ||||| ||||||||||||||||||| || ||||| || |||||||| Sbjct: 638 tacctgcaccatttgtgttgcacacagattgccctcattattggcgttttcatcttcc 695
>gb|AY034923.1| Arabidopsis thaliana putative aminotransferase (At3g22200) mRNA, complete cds Length = 1782 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 545 taccagcaccttttgtactgcacacagattgccctcactactggcgcttccatcttcc 602 |||| ||||| ||||| ||||||||||||||||||| || ||||| || |||||||| Sbjct: 766 tacctgcaccatttgtgttgcacacagattgccctcattattggcgttttcatcttcc 823
>emb|BX823758.1|CNS0A5DR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS72ZE04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1728 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 545 taccagcaccttttgtactgcacacagattgccctcactactggcgcttccatcttcc 602 |||| ||||| ||||| ||||||||||||||||||| || ||||| || |||||||| Sbjct: 753 tacctgcaccatttgtgttgcacacagattgccctcattattggcgttttcatcttcc 810
>dbj|AP001306.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MKA23 Length = 70100 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 545 taccagcaccttttgtactgcacacagattgccctcactactggcgcttccatcttcc 602 |||| ||||| ||||| ||||||||||||||||||| || ||||| || |||||||| Sbjct: 45581 tacctgcaccatttgtgttgcacacagattgccctcattattggcgttttcatcttcc 45638
>gb|L24012.1|TOMTRALTAL Lycopersicon esculentum (DB149) meloidogyne-induced giant cell protein mRNA, 3' end Length = 325 Score = 52.0 bits (26), Expect = 0.002 Identities = 100/122 (81%), Gaps = 2/122 (1%) Strand = Plus / Minus Query: 440 ggccaaacaagaagaagtttattgcacgaacaaaagcatatcatggatcaacgt-taata 498 ||||| |||| ||||| |||||||| ||||||||| |||| || ||||| || | | || Sbjct: 159 ggccagacaaaaagaaatttattgctcgaacaaaatcataccacggatccacctctcatt 100 Query: 499 tcagctagtctcactggtcttcctgccctgcaccagaagttcgatctaccagcacctttt 558 || ||||||||| ||| ||||||||| || || ||| | |||||||||||||| || ||| Sbjct: 99 tccgctagtctctctg-tcttcctgcactacatcagcaattcgatctaccagctccgttt 41 Query: 559 gt 560 || Sbjct: 40 gt 39 Score = 48.1 bits (24), Expect = 0.034 Identities = 48/56 (85%) Strand = Plus / Minus Query: 367 ttcacaaacagtggttcggaagcaaacgactcacaggtcaaactagtatggtatta 422 ||||||||||| || || ||||| || ||| ||||||| ||||| ||||||||||| Sbjct: 226 ttcacaaacagcggatcagaagccaatgacacacaggtgaaactggtatggtatta 171
>gb|AF247819.1| Lycopersicon esculentum viroid RNA-binding protein-like (Virp2) mRNA, complete sequence Length = 1432 Score = 48.1 bits (24), Expect = 0.034 Identities = 120/152 (78%) Strand = Plus / Plus Query: 334 atgttcactgcaaacaaaatgggaaaggcattcttcacaaacagtggttcggaagcaaac 393 ||||| |||||||| || |||||||| | || ||||||| ||||| || ||||| || Sbjct: 327 atgtttactgcaaataagatgggaaaagtttttttcacaagtagtggatcagaagctaat 386 Query: 394 gactcacaggtcaaactagtatggtattataacaatgcattggggaggccaaacaagaag 453 ||| | ||||| || | || |||||||| |||||||| | |||||||||||||| ||| Sbjct: 387 gacactcaggtgaagttggtgtggtattacaacaatgccattgggaggccaaacaaaaag 446 Query: 454 aagtttattgcacgaacaaaagcatatcatgg 485 || ||||| | |||| ||| ||||| ||||| Sbjct: 447 aaaattatttctcgaaaaaatgcataccatgg 478 Score = 40.1 bits (20), Expect = 8.3 Identities = 41/48 (85%) Strand = Plus / Plus Query: 136 gagggttcttatgtttatgacatcaatgggaataagtatctagattct 183 |||||||||||||| |||||| | ||||| || ||||| || |||||| Sbjct: 129 gagggttcttatgtctatgacgtaaatggaaagaagtaccttgattct 176
>emb|AJ420798.1|LES420798 Lycopersicon esculentum partial mRNA for viroid RNA-binding protein, clone Virp2 Length = 1432 Score = 48.1 bits (24), Expect = 0.034 Identities = 120/152 (78%) Strand = Plus / Plus Query: 334 atgttcactgcaaacaaaatgggaaaggcattcttcacaaacagtggttcggaagcaaac 393 ||||| |||||||| || |||||||| | || ||||||| ||||| || ||||| || Sbjct: 327 atgtttactgcaaataagatgggaaaagtttttttcacaagtagtggatcagaagctaat 386 Query: 394 gactcacaggtcaaactagtatggtattataacaatgcattggggaggccaaacaagaag 453 ||| | ||||| || | || |||||||| |||||||| | |||||||||||||| ||| Sbjct: 387 gacactcaggtgaagttggtgtggtattacaacaatgccattgggaggccaaacaaaaag 446 Query: 454 aagtttattgcacgaacaaaagcatatcatgg 485 || ||||| | |||| ||| ||||| ||||| Sbjct: 447 aaaattatttctcgaaaaaatgcataccatgg 478 Score = 40.1 bits (20), Expect = 8.3 Identities = 41/48 (85%) Strand = Plus / Plus Query: 136 gagggttcttatgtttatgacatcaatgggaataagtatctagattct 183 |||||||||||||| |||||| | ||||| || ||||| || |||||| Sbjct: 129 gagggttcttatgtctatgacgtaaatggaaagaagtaccttgattct 176
>gb|AY240230.1| Lycopersicon esculentum gamma-aminobutyrate transaminase subunit precursor isozyme 2 mRNA, complete cds Length = 1586 Score = 48.1 bits (24), Expect = 0.034 Identities = 120/152 (78%) Strand = Plus / Plus Query: 334 atgttcactgcaaacaaaatgggaaaggcattcttcacaaacagtggttcggaagcaaac 393 ||||| |||||||| || |||||||| | || ||||||| ||||| || ||||| || Sbjct: 356 atgtttactgcaaataagatgggaaaagtttttttcacaagtagtggatcagaagctaat 415 Query: 394 gactcacaggtcaaactagtatggtattataacaatgcattggggaggccaaacaagaag 453 ||| | ||||| || | || |||||||| |||||||| | |||||||||||||| ||| Sbjct: 416 gacactcaggtgaagttggtgtggtattacaacaatgccattgggaggccaaacaaaaag 475 Query: 454 aagtttattgcacgaacaaaagcatatcatgg 485 || ||||| | |||| ||| ||||| ||||| Sbjct: 476 aaaattatttctcgaaaaaatgcataccatgg 507
>emb|AL035541.15|HS718J7 Human DNA sequence from clone RP4-718J7 on chromosome 20q13.31-13.33 Contains the PCK1 gene for soluble phosphoenolpyruvate carboxykinase 1, the ZBP1 gene for Z-DNA binding protein 1, the 3' end of the TMEPAI gene for transmembrane prostate androgen induced mRNA, two putative novel genes, the 5' end of the CTCFL gene for CCCTC-binding factor (zinc finger)-like and a CpG island, complete sequence Length = 130435 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 410 tagtatggtattataacaatg 430 ||||||||||||||||||||| Sbjct: 22739 tagtatggtattataacaatg 22719
>ref|XM_519849.1| PREDICTED: Pan troglodytes similar to hypothetical protein (LOC464275), mRNA Length = 577 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 462 tgcacgaacaaaagcatatcatggatca 489 ||||||| ||| |||||||||||||||| Sbjct: 239 tgcacgaccaagagcatatcatggatca 266
>gb|AC151913.1| Pan troglodytes chromosome X clone RP43-057B02 map human ortholog q26.2, complete sequence Length = 173886 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 gtgtacagctttaggtggta 217 |||||||||||||||||||| Sbjct: 138037 gtgtacagctttaggtggta 138018
>gb|AC151912.1| Pan troglodytes chromosome X clone PTB-093M21 map human ortholog q26.2, complete sequence Length = 180904 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 gtgtacagctttaggtggta 217 |||||||||||||||||||| Sbjct: 25318 gtgtacagctttaggtggta 25299
>gb|AC140182.2| Mus musculus BAC clone RP24-349I16 from chromosome 8, complete sequence Length = 151221 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 591 cttccatcttcctggtgaga 610 |||||||||||||||||||| Sbjct: 120800 cttccatcttcctggtgaga 120781
>gb|AC002467.1| Homo sapiens BAC clone CTA-364P16 from 7, complete sequence Length = 97943 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 tcaaactagtatggtattat 423 |||||||||||||||||||| Sbjct: 73325 tcaaactagtatggtattat 73306
>gb|AC124576.4| Mus musculus BAC clone RP23-162H6 from chromosome 16, complete sequence Length = 233527 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 cagttcagcatcgtctcctc 27 |||||||||||||||||||| Sbjct: 83847 cagttcagcatcgtctcctc 83866
>gb|AC123826.4| Mus musculus BAC clone RP24-97K3 from chromosome 8, complete sequence Length = 188704 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 591 cttccatcttcctggtgaga 610 |||||||||||||||||||| Sbjct: 63996 cttccatcttcctggtgaga 63977
>emb|Z97196.1|HS448E20 Human DNA sequence from clone RP3-448E20 on chromosome Xq25-26.3, complete sequence Length = 88882 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 gtgtacagctttaggtggta 217 |||||||||||||||||||| Sbjct: 75376 gtgtacagctttaggtggta 75395
>emb|AL109804.41|HS1009E24 Human DNA sequence from clone RP5-1009E24 on chromosome 20 Contains the 5' end of the ADAM33 gene for a disintegrin and metalloproteinase domain 33 protein, the SN gene encoding sialoadhesin, the C20orf60 gene, the C20orf27 gene, the C20orf28 gene, the CENPB gene for centromere protein B, the CDC25B gene for cell division cycle protein 25B, the C20orf29 gene, the 5' end of the gene for a novel protein (KIAA1271) and nine CpG islands, complete sequence Length = 185820 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 acaaaagcatatcatggatc 488 |||||||||||||||||||| Sbjct: 49696 acaaaagcatatcatggatc 49677
>gb|AC083903.10| Homo sapiens BAC clone RP11-785G23 from UL, complete sequence Length = 174480 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 atggcatgttggcaccattc 84 |||||||||||||||||||| Sbjct: 6478 atggcatgttggcaccattc 6497
>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB Length = 1683333 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 571 gattgccctcactactggcgcttc 594 |||||||| ||||||||||||||| Sbjct: 390797 gattgcccgcactactggcgcttc 390774
>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome Length = 5727534 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 atgtttatgacatcaatggg 165 |||||||||||||||||||| Sbjct: 3574210 atgtttatgacatcaatggg 3574191
>dbj|AK028337.1| Mus musculus 12 days embryo embryonic body below diaphragm region cDNA, RIKEN full-length enriched library, clone:3732413O03 product:unclassifiable, full insert sequence Length = 4561 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 591 cttccatcttcctggtgaga 610 |||||||||||||||||||| Sbjct: 1234 cttccatcttcctggtgaga 1215
>gb|AC068941.7| Homo sapiens BAC clone RP11-465O11 from 2, complete sequence Length = 101127 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 atggcatgttggcaccattc 84 |||||||||||||||||||| Sbjct: 86695 atggcatgttggcaccattc 86714
>gb|AF204177.1|AF204177 Dengue virus type 2 strain 44, complete genome Length = 10723 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 caaaccaacattggatcttg 316 |||||||||||||||||||| Sbjct: 1047 caaaccaacattggatcttg 1066
>emb|AJ298130.1|MMU298130 Mus musculus partial Plapi gene for plasmolipin, exons 2-4 Length = 14551 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 591 cttccatcttcctggtgaga 610 |||||||||||||||||||| Sbjct: 11348 cttccatcttcctggtgaga 11367
>dbj|AP002961.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-2I22, complete sequence Length = 157903 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 406 aaactagtatggtattataa 425 |||||||||||||||||||| Sbjct: 78568 aaactagtatggtattataa 78587
>dbj|AP002898.1| Homo sapiens genomic DNA, chromosome 20p, clone:13N6, complete sequence Length = 206647 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 acaaaagcatatcatggatc 488 |||||||||||||||||||| Sbjct: 202481 acaaaagcatatcatggatc 202462 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,215,370 Number of Sequences: 3902068 Number of extensions: 5215370 Number of successful extensions: 118913 Number of sequences better than 10.0: 53 Number of HSP's better than 10.0 without gapping: 53 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 118674 Number of HSP's gapped (non-prelim): 234 length of query: 610 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 587 effective length of database: 17,143,297,704 effective search space: 10063115752248 effective search space used: 10063115752248 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
