ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags1l03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY109992.1| Zea mays CL9168_1 mRNA sequence Length = 1226 Score = 555 bits (280), Expect = e-155 Identities = 514/591 (86%), Gaps = 1/591 (0%) Strand = Plus / Minus Query: 44 atgtcgtccgnggcggcgaag-tggtggtgccggagtcggtgctcctcaagaggaagcgg 102 |||||||||| |||| ||||| ||| |||||||||||||||||||| |||| ||||||| Sbjct: 1190 atgtcgtccgaggcgtcgaaggtggcggtgccggagtcggtgctccgcaagcggaagcgc 1131 Query: 103 gaggagctctgggccgccgagaagaagaccaaggccgtcgaggagaagaagaagtcgacg 162 ||||| | |||||| ||||||||||| |||||| | | |||||||||||||| | Sbjct: 1130 gaggaacagtgggccaccgagaagaaggagaaggccctagccgagaagaagaagtccatc 1071 Query: 163 gagaaccgcaaggtcatcttcgcccgcgccaagcagtacgccgaggagtacgatgcacag 222 |||| ||||||| |||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 1070 gagagccgcaagctcatcttcacccgcgccaagcagtacgccgaggagtacgatgcccag 1011 Query: 223 gacaaggagttggttcagcttaagcgtgaggcccggatgaagggtgggttctatgtcagt 282 || ||||| |||| |||||||||||||||||||| |||||||||| |||||||||||| Sbjct: 1010 gagaaggaactggtgcagcttaagcgtgaggcccgtttgaagggtggtttctatgtcagt 951 Query: 283 cctgaggctaagttgctgtttgttgtccgaatcagaggtatcaatgccatgcacccaaag 342 |||||||| ||| |||| ||||| ||||| ||| | |||||||||||||||||||| ||| Sbjct: 950 cctgaggcaaagctgctctttgtggtccgcatccgtggtatcaatgccatgcaccctaag 891 Query: 343 accaagaagatcctccagcttttgcgtttgagacagatattcaatggagtgttcctcaag 402 |||| ||||||| | |||||| |||| ||||| ||||| |||||||| ||||||||||| Sbjct: 890 accaggaagatcttgcagcttctgcgattgaggcagatcttcaatggcgtgttcctcaaa 831 Query: 403 gttaacaaggccaccatcaacatgctccgcagggtcgagccatatgttgcatatgggtac 462 || |||||||| || || |||||||| |||||||| |||||||||||||||||||||||| Sbjct: 830 gtcaacaaggctactattaacatgctacgcagggttgagccatatgttgcatatgggtac 771 Query: 463 ccgaacctgaagagtgtgagggagttgatctacaagagaggttatggaaagctcaacaag 522 || ||| |||||||||| |||||||||||||||||||| || ||||||||||| |||||| Sbjct: 770 ccaaacttgaagagtgtcagggagttgatctacaagaggggctatggaaagctgaacaag 711 Query: 523 caaaggattcctctgaccaacaacaaggtcatcgaggagggtcttggaaagcacaacatc 582 || ||||| |||||| |||||||| | |||||||||||||| | || |||||||||||| Sbjct: 710 cagaggatccctctgtccaacaaccaagtcatcgaggagggcttgggcaagcacaacatc 651 Query: 583 atctgcattgaagacgttgtccacgagatcttgacggttggccctcacttc 633 ||||||||||| || |||| ||||||||| |||| |||||||| |||||| Sbjct: 650 atctgcattgaggatcttgttcacgagatcatgactgttggcccacacttc 600
>gb|AY846828.1| Triticum aestivum ribosomal protein L7 mRNA, complete cds Length = 787 Score = 525 bits (265), Expect = e-146 Identities = 505/584 (86%), Gaps = 1/584 (0%) Strand = Plus / Plus Query: 50 tccgnggcggcgaag-tggtggtgccggagtcggtgctcctcaagaggaagcgggaggag 108 |||| |||||||||| ||| |||||| ||| |||| |||| ||||||| | |||| ||| Sbjct: 51 tccgaggcggcgaaggtggcggtgcccgagaaggtgatcctaaagaggaggagggaagag 110 Query: 109 ctctgggccgccgagaagaagaccaaggccgtcgaggagaagaagaagtcgacggagaac 168 |||||||||||||||||||| |||| | || ||||||| ||| | | |||||| Sbjct: 111 gtctgggccgccgagaagaagcagaaggttgccgccgagaagataaaggccgccgagaac 170 Query: 169 cgcaaggtcatcttcgcccgcgccaagcagtacgccgaggagtacgatgcacaggacaag 228 ||||||||||| ||||||||| |||||||||||| |||||| || || ||||||||| Sbjct: 171 accaaggtcatctacgcccgcgcggagcagtacgccggggagtatgaggcccaggacaag 230 Query: 229 gagttggttcagcttaagcgtgaggcccggatgaagggtgggttctatgtcagtcctgag 288 ||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 231 gagctggtgcaacttaagcgtgaggcccggatgaagggtgggttctatgtcagtcctgag 290 Query: 289 gctaagttgctgtttgttgtccgaatcagaggtatcaatgccatgcacccaaagaccaag 348 || ||| ||||||||| ||||| ||| | ||||||||||| |||||||||||||||||| Sbjct: 291 gcaaagccgctgtttgtcgtccgtatccgtggtatcaatgcaatgcacccaaagaccaag 350 Query: 349 aagatcctccagcttttgcgtttgagacagatattcaatggagtgttcctcaaggttaac 408 |||||| | ||||||||||||||||| ||||| || ||||| |||||||| ||||| ||| Sbjct: 351 aagatcttgcagcttttgcgtttgaggcagatttttaatggtgtgttccttaaggtcaac 410 Query: 409 aaggccaccatcaacatgctccgcagggtcgagccatatgttgcatatgggtacccgaac 468 ||||||||||| |||||||| || |||| |||||||||||| | || |||||||| ||| Sbjct: 411 aaggccaccattaacatgctgcgtcgggttgagccatatgttacctacgggtaccctaac 470 Query: 469 ctgaagagtgtgagggagttgatctacaagagaggttatggaaagctcaacaagcaaagg 528 || |||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||| Sbjct: 471 ctcaagagtgtcagggagctgatctacaagagaggttacggaaagctcaacaagcaaagg 530 Query: 529 attcctctgaccaacaacaaggtcatcgaggagggtcttggaaagcacaacatcatctgc 588 || |||||| |||||||||| ||||||||||||||| | || |||||||||||||||||| Sbjct: 531 atccctctggccaacaacaaagtcatcgaggagggtttggggaagcacaacatcatctgc 590 Query: 589 attgaagacgttgtccacgagatcttgacggttggccctcactt 632 ||||| ||| |||| |||||||||||||| || ||||| ||||| Sbjct: 591 attgaggaccttgtgcacgagatcttgaccgtcggcccacactt 634
>dbj|AK073472.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044G24, full insert sequence Length = 1040 Score = 519 bits (262), Expect = e-144 Identities = 514/596 (86%), Gaps = 2/596 (0%) Strand = Plus / Plus Query: 32 agctcgtcgngnatgtcgtccgnggcggcgaag-tggtggtgccggagtcggtgctcctc 90 ||||||||| | ||| |||||| |||||| ||| |||||||||||||||| ||||||| | Sbjct: 105 agctcgtcgag-atggcgtccgaggcggccaaggtggtggtgccggagtccgtgctccgc 163 Query: 91 aagaggaagcgggaggagctctgggccgccgagaagaagaccaaggccgtcgaggagaag 150 |||||||||||||||||| | ||||| |||| || ||| |||||||||| |||||| Sbjct: 164 aagaggaagcgggaggaggtgtgggcggccgcgagcaaggagaaggccgtcgccgagaag 223 Query: 151 aagaagtcgacggagaaccgcaaggtcatcttcgcccgcgccaagcagtacgccgaggag 210 |||||||| | |||| ||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 224 aagaagtccatcgagagccgcaagctcatcttctcccgcgccaagcagtacgccgaggag 283 Query: 211 tacgatgcacaggacaaggagttggttcagcttaagcgtgaggcccggatgaagggtggg 270 ||||| || ||||| |||||| |||| || |||||||||||||| |||||||||||||| Sbjct: 284 tacgaggcccaggagaaggagctggtgcaacttaagcgtgaggctcggatgaagggtggt 343 Query: 271 ttctatgtcagtcctgaggctaagttgctgtttgttgtccgaatcagaggtatcaatgcc 330 ||||||||||| ||||||| |||||||||||||| ||||| ||| | |||||||||||| Sbjct: 344 ttctatgtcagccctgaggaaaagttgctgtttgtggtccgtatccgtggtatcaatgcc 403 Query: 331 atgcacccaaagaccaagaagatcctccagcttttgcgtttgagacagatattcaatgga 390 |||||||| ||||||| |||||| | ||||| ||||||||||| ||||| || |||||| Sbjct: 404 atgcacccgaagaccaggaagattttgcagctcttgcgtttgaggcagatctttaatgga 463 Query: 391 gtgttcctcaaggttaacaaggccaccatcaacatgctccgcagggtcgagccatatgtt 450 |||||| | ||||| ||||| |||||||| |||||||| |||||||| |||||||||||| Sbjct: 464 gtgttcttgaaggtcaacaaagccaccattaacatgctgcgcagggttgagccatatgtt 523 Query: 451 gcatatgggtacccgaacctgaagagtgtgagggagttgatctacaagagaggttatgga 510 |||||||||||||| || |||||||||| | || |||||||||||||| || |||||| Sbjct: 524 gcatatgggtacccaaatttgaagagtgtccgtgaattgatctacaagaggggctatgga 583 Query: 511 aagctcaacaagcaaaggattcctctgaccaacaacaaggtcatcgaggagggtcttgga 570 ||||||||||||||||| || ||||| || |||||||| ||||||||||||||| | || Sbjct: 584 aagctcaacaagcaaagaatccctcttacaaacaacaaagtcatcgaggagggtttgggt 643 Query: 571 aagcacaacatcatctgcattgaagacgttgtccacgagatcttgacggttggccc 626 ||||| |||||||||||||||| || |||| || |||||| |||| |||||||| Sbjct: 644 aagcatgacatcatctgcattgaggatcttgttcatgagatcatgactgttggccc 699
>gb|BT017565.1| Zea mays clone EL01N0425H11.c mRNA sequence Length = 922 Score = 502 bits (253), Expect = e-139 Identities = 487/565 (86%) Strand = Plus / Plus Query: 69 ggtgccggagtcggtgctcctcaagaggaagcgggaggagctctgggccgccgagaagaa 128 |||||||||||||||||||| |||| ||||||| ||||| | |||||| |||||||||| Sbjct: 22 ggtgccggagtcggtgctccgcaagcggaagcgcgaggaacagtgggccaccgagaagaa 81 Query: 129 gaccaaggccgtcgaggagaagaagaagtcgacggagaaccgcaaggtcatcttcgcccg 188 | |||||| | | |||||||||||||| | |||| ||||||| |||||||| |||| Sbjct: 82 ggagaaggccctagtcgagaagaagaagtccatcgagagccgcaagctcatcttcacccg 141 Query: 189 cgccaagcagtacgccgaggagtacgatgcacaggacaaggagttggttcagcttaagcg 248 ||| ||||||||||||||||| |||||||| ||||| ||||| |||| ||||||||||| Sbjct: 142 cgcaaagcagtacgccgaggaatacgatgcccaggagaaggaactggtgcagcttaagcg 201 Query: 249 tgaggcccggatgaagggtgggttctatgtcagtcctgaggctaagttgctgtttgttgt 308 |||||||| |||||||||| |||||||||||||||||||| ||| |||| ||||| || Sbjct: 202 cgaggcccgtttgaagggtggtttctatgtcagtcctgaggcaaagctgctctttgtggt 261 Query: 309 ccgaatcagaggtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcg 368 ||| ||| | ||||| || ||||||||||| ||||||| ||||||| | |||||| |||| Sbjct: 262 ccgcatccggggtattaacgccatgcaccctaagaccaggaagatcttgcagcttctgcg 321 Query: 369 tttgagacagatattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgct 428 ||||| ||||| |||||||| ||||||||||| || |||||||| || || |||||||| Sbjct: 322 attgaggcagatcttcaatggtgtgttcctcaaagtcaacaaggcgactattaacatgct 381 Query: 429 ccgcagggtcgagccatatgttgcatatgggtacccgaacctgaagagtgtgagggagtt 488 |||||||| |||||||||||||||||||||||||| ||| |||||||||| |||||||| Sbjct: 382 acgcagggttgagccatatgttgcatatgggtacccaaacttgaagagtgtcagggagtt 441 Query: 489 gatctacaagagaggttatggaaagctcaacaagcaaaggattcctctgaccaacaacaa 548 |||||||||||| || ||||||||||| |||||||| ||||| |||||| |||||||| | Sbjct: 442 gatctacaagaggggctatggaaagctgaacaagcagaggatccctctgtccaacaacca 501 Query: 549 ggtcatcgaggagggtcttggaaagcacaacatcatctgcattgaagacgttgtccacga 608 |||||||||||||| | || ||||||||||||||||||||||| || |||| ||||| Sbjct: 502 agtcatcgaggagggcttgggcaagcacaacatcatctgcattgaggatcttgttcacga 561 Query: 609 gatcttgacggttggccctcacttc 633 |||| |||| |||||||| |||||| Sbjct: 562 gatcatgactgttggcccacacttc 586
>gb|AY104655.1| Zea mays PCO101521 mRNA sequence Length = 1155 Score = 492 bits (248), Expect = e-136 Identities = 506/591 (85%), Gaps = 1/591 (0%) Strand = Plus / Plus Query: 44 atgtcgtccgnggcggcgaag-tggtggtgccggagtcggtgctcctcaagaggaagcgg 102 |||||||||| ||||| |||| ||| ||||||||||||||| |||| |||| ||||||| Sbjct: 61 atgtcgtccgaggcggtgaaggtggcggtgccggagtcggtactccgcaagcggaagcgc 120 Query: 103 gaggagctctgggccgccgagaagaagaccaaggccgtcgaggagaagaagaagtcgacg 162 ||||||| |||||||||||||||||| ||| || | | |||| ||||||||| | Sbjct: 121 gaggagcagtgggccgccgagaagaaggagaagtccctggccgagaggaagaagtccatc 180 Query: 163 gagaaccgcaaggtcatcttcgcccgcgccaagcagtacgccgaggagtacgatgcacag 222 |||||||| ||| |||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 181 gagaaccggaagctcatcttcacccgcgccaagcagtacgccgaggagtacgatgcccag 240 Query: 223 gacaaggagttggttcagcttaagcgtgaggcccggatgaagggtgggttctatgtcagt 282 || ||||| |||| |||||||||||||||||||| |||||||||| |||||||||||| Sbjct: 241 gagaaggaactggtacagcttaagcgtgaggcccgtttgaagggtggtttctatgtcagt 300 Query: 283 cctgaggctaagttgctgtttgttgtccgaatcagaggtatcaatgccatgcacccaaag 342 |||||||| ||| |||| ||||| |||| ||| | ||||||||||||||||| || ||| Sbjct: 301 cctgaggcaaagctgctatttgtgatccgcatccgtggtatcaatgccatgcatcctaag 360 Query: 343 accaagaagatcctccagcttttgcgtttgagacagatattcaatggagtgttcctcaag 402 |||| |||||| | |||||| |||||||||| |||||||||||||| |||||||| || Sbjct: 361 accaggaagatattgcagcttctgcgtttgaggcagatattcaatggcgtgttcctgaaa 420 Query: 403 gttaacaaggccaccatcaacatgctccgcagggtcgagccatatgttgcatatgggtac 462 || |||||||| ||||| |||||||| |||||||| ||||| |||||||||||||||||| Sbjct: 421 gtcaacaaggctaccattaacatgcttcgcagggttgagccttatgttgcatatgggtac 480 Query: 463 ccgaacctgaagagtgtgagggagttgatctacaagagaggttatggaaagctcaacaag 522 |||||| |||||||||| |||||||||||||||||||| || || ||||| || |||||| Sbjct: 481 ccgaacttgaagagtgtcagggagttgatctacaagaggggctacggaaaactgaacaag 540 Query: 523 caaaggattcctctgaccaacaacaaggtcatcgaggagggtcttggaaagcacaacatc 582 || ||||| |||||| | |||||| | |||||||||||||| | || |||||||||||| Sbjct: 541 cagaggatccctctgtctaacaaccaagtcatcgaggagggcttgggcaagcacaacatc 600 Query: 583 atctgcattgaagacgttgtccacgagatcttgacggttggccctcacttc 633 || |||||||| || |||| || |||||| |||| || ||||| |||||| Sbjct: 601 atttgcattgaggatcttgttcatgagatcatgactgtcggcccacacttc 651
>ref|XM_473801.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 753 Score = 484 bits (244), Expect = e-133 Identities = 448/515 (86%), Gaps = 1/515 (0%) Strand = Plus / Plus Query: 48 cgtccgnggcggcgaag-tggtggtgccggagtcggtgctcctcaagaggaagcgggagg 106 |||||| |||||| ||| |||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 5 cgtccgaggcggccaaggtggtggtgccggagtccgtgctccgcaagaggaagcgggagg 64 Query: 107 agctctgggccgccgagaagaagaccaaggccgtcgaggagaagaagaagtcgacggaga 166 || | ||||| |||| || ||| |||||||||| |||||||||||||| | |||| Sbjct: 65 aggtgtgggcggccgcgagcaaggagaaggccgtcgccgagaagaagaagtccatcgaga 124 Query: 167 accgcaaggtcatcttcgcccgcgccaagcagtacgccgaggagtacgatgcacaggaca 226 ||||||| |||||||| ||||||||||||||||||||||||||||||| || ||||| | Sbjct: 125 gccgcaagctcatcttctcccgcgccaagcagtacgccgaggagtacgaggcccaggaga 184 Query: 227 aggagttggttcagcttaagcgtgaggcccggatgaagggtgggttctatgtcagtcctg 286 ||||| |||| || |||||||||||||| |||||||||||||| ||||||||||| |||| Sbjct: 185 aggagctggtgcaacttaagcgtgaggctcggatgaagggtggtttctatgtcagccctg 244 Query: 287 aggctaagttgctgtttgttgtccgaatcagaggtatcaatgccatgcacccaaagacca 346 ||| |||||||||||||| ||||| ||| | |||||||||||||||||||| ||||||| Sbjct: 245 aggaaaagttgctgtttgtggtccgtatccgtggtatcaatgccatgcacccgaagacca 304 Query: 347 agaagatcctccagcttttgcgtttgagacagatattcaatggagtgttcctcaaggtta 406 |||||| | ||||| ||||||||||| ||||| || |||||||||||| | ||||| | Sbjct: 305 ggaagattttgcagctcttgcgtttgaggcagatctttaatggagtgttcttgaaggtca 364 Query: 407 acaaggccaccatcaacatgctccgcagggtcgagccatatgttgcatatgggtacccga 466 |||| |||||||| |||||||| |||||||| |||||||||||||||||||||||||| | Sbjct: 365 acaaagccaccattaacatgctgcgcagggttgagccatatgttgcatatgggtacccaa 424 Query: 467 acctgaagagtgtgagggagttgatctacaagagaggttatggaaagctcaacaagcaaa 526 | |||||||||| | || |||||||||||||| || |||||||||||||||||||||| Sbjct: 425 atttgaagagtgtccgtgaattgatctacaagaggggctatggaaagctcaacaagcaaa 484 Query: 527 ggattcctctgaccaacaacaaggtcatcgaggag 561 | || ||||| || |||||||| |||||||||||| Sbjct: 485 gaatccctcttacaaacaacaaagtcatcgaggag 519 Score = 42.1 bits (21), Expect = 2.2 Identities = 42/49 (85%) Strand = Plus / Plus Query: 578 acatcatctgcattgaagacgttgtccacgagatcttgacggttggccc 626 |||||||||||||||| || |||| || |||||| |||| |||||||| Sbjct: 554 acatcatctgcattgaggatcttgttcatgagatcatgactgttggccc 602
>gb|BT016468.1| Zea mays clone Contig301 mRNA sequence Length = 1198 Score = 478 bits (241), Expect = e-131 Identities = 506/592 (85%), Gaps = 2/592 (0%) Strand = Plus / Plus Query: 44 atgtcgtccgnggcggcgaag-tggtggtgccggagtcggtgctcctcaagaggaagcgg 102 |||||||||| ||| | |||| ||| ||||||||||||||| |||| |||| ||||||| Sbjct: 47 atgtcgtccgaggccgtgaaggtggcggtgccggagtcggtactccgcaagcggaagcgc 106 Query: 103 gaggagctctgggccgccgagaagaa-gaccaaggccgtcgaggagaagaagaagtcgac 161 ||||||| ||||||||||||||||| || ||| || | | |||| ||||||||| | Sbjct: 107 gaggagcagtgggccgccgagaagaacgatgaagtccctggccgagaggaagaagtccat 166 Query: 162 ggagaaccgcaaggtcatcttcgcccgcgccaagcagtacgccgaggagtacgatgcaca 221 |||| ||| ||| |||||||| |||||||||||||||||||||||||||||||||| || Sbjct: 167 cgagagccggaagctcatcttcacccgcgccaagcagtacgccgaggagtacgatgccca 226 Query: 222 ggacaaggagttggttcagcttaagcgtgaggcccggatgaagggtgggttctatgtcag 281 ||| ||||| |||| |||||||||||||||||||| |||||||||| ||||||||||| Sbjct: 227 ggagaaggaactggtacagcttaagcgtgaggcccgtttgaagggtggtttctatgtcag 286 Query: 282 tcctgaggctaagttgctgtttgttgtccgaatcagaggtatcaatgccatgcacccaaa 341 |||||||| ||| |||| ||||| ||||| ||| | |||||||||||||||||||| || Sbjct: 287 ccctgaggcaaagctgctatttgtggtccgcatccgtggtatcaatgccatgcaccctaa 346 Query: 342 gaccaagaagatcctccagcttttgcgtttgagacagatattcaatggagtgttcctcaa 401 ||||| |||||| | |||||| |||||||||| ||||| ||||||||||||||||| || Sbjct: 347 gaccaggaagatattgcagcttctgcgtttgaggcagatcttcaatggagtgttcctgaa 406 Query: 402 ggttaacaaggccaccatcaacatgctccgcagggtcgagccatatgttgcatatgggta 461 || ||||| || ||||| |||||||| |||||||| || || ||||||||||||||||| Sbjct: 407 agtcaacaaagcaaccattaacatgcttcgcagggttgaaccttatgttgcatatgggta 466 Query: 462 cccgaacctgaagagtgtgagggagttgatctacaagagaggttatggaaagctcaacaa 521 ||||||| |||||||||| |||||||||||||||||||| || || ||||| || ||||| Sbjct: 467 cccgaacttgaagagtgtcagggagttgatctacaagaggggctacggaaaactgaacaa 526 Query: 522 gcaaaggattcctctgaccaacaacaaggtcatcgaggagggtcttggaaagcacaacat 581 ||| ||||| |||||| | |||||| | |||||||||||||| | || ||||||||||| Sbjct: 527 gcagaggatccctctgtctaacaaccaagtcatcgaggagggcttgggcaagcacaacat 586 Query: 582 catctgcattgaagacgttgtccacgagatcttgacggttggccctcacttc 633 |||||| ||||| || |||| ||||||||| |||| |||||||| |||||| Sbjct: 587 catctgtattgaggatcttgttcacgagatcatgactgttggcccacacttc 638
>ref|XM_480842.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1084 Score = 460 bits (232), Expect = e-126 Identities = 472/552 (85%) Strand = Plus / Plus Query: 66 ggtggtgccggagtcggtgctcctcaagaggaagcgggaggagctctgggccgccgagaa 125 ||||||||||||||||||||| ||| ||||||||||||||| ||||| || || | Sbjct: 82 ggtggtgccggagtcggtgctgaagaagcggaagcgggaggagcagtgggcggcggacag 141 Query: 126 gaagaccaaggccgtcgaggagaagaagaagtcgacggagaaccgcaaggtcatcttcgc 185 |||| ||||| ||| |||||||||||| | |||| ||||||| |||||||||| Sbjct: 142 gaaggagaaggcgctcgccgagaagaagaaggccgtcgagagccgcaagctcatcttcgc 201 Query: 186 ccgcgccaagcagtacgccgaggagtacgatgcacaggacaaggagttggttcagcttaa 245 ||||||||||||||||||| |||||||||| || ||||| |||||| | || ||||| || Sbjct: 202 ccgcgccaagcagtacgcccaggagtacgacgcgcaggagaaggagcttgtgcagctcaa 261 Query: 246 gcgtgaggcccggatgaagggtgggttctatgtcagtcctgaggctaagttgctgtttgt 305 ||||||||| |||||||||||||||||||| ||||| |||||||| || | |||||||| Sbjct: 262 gcgtgaggctcggatgaagggtgggttctacgtcagccctgaggccaaacttctgtttgt 321 Query: 306 tgtccgaatcagaggtatcaatgccatgcacccaaagaccaagaagatcctccagctttt 365 ||||| ||| | |||||||||||||||||||| ||||||| ||||||| | |||||| | Sbjct: 322 ggtccgcatccgtggtatcaatgccatgcaccccaagaccaggaagatcttgcagcttct 381 Query: 366 gcgtttgagacagatattcaatggagtgttcctcaaggttaacaaggccaccatcaacat 425 ||| ||||| ||||| |||||||| || |||||||||||||||||||| ||||| ||||| Sbjct: 382 gcggttgaggcagatcttcaatggtgtcttcctcaaggttaacaaggcaaccattaacat 441 Query: 426 gctccgcagggtcgagccatatgttgcatatgggtacccgaacctgaagagtgtgaggga 485 ||| |||||||| |||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 442 gctgcgcagggttgagccatatgttgcatatgggtacccaaacctgaagagtgtcaggga 501 Query: 486 gttgatctacaagagaggttatggaaagctcaacaagcaaaggattcctctgaccaacaa 545 |||||||||||||| ||||| ||||||||||||||||| ||||||||||| ||||| Sbjct: 502 attgatctacaagaggggttacggaaagctcaacaagcagaggattcctcttcagaacaa 561 Query: 546 caaggtcatcgaggagggtcttggaaagcacaacatcatctgcattgaagacgttgtcca 605 ||| ||||| |||||||| | || ||||| |||||||||||||||| || ||||||| Sbjct: 562 caaagtcattgaggagggcttggggaagcatgacatcatctgcattgaggatcttgtcca 621 Query: 606 cgagatcttgac 617 ||||||| |||| Sbjct: 622 cgagatcatgac 633
>dbj|AK102873.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033112B19, full insert sequence Length = 1084 Score = 452 bits (228), Expect = e-124 Identities = 471/552 (85%) Strand = Plus / Plus Query: 66 ggtggtgccggagtcggtgctcctcaagaggaagcgggaggagctctgggccgccgagaa 125 ||||||||||||||||||||| ||| ||||||||||||||| ||||| || || | Sbjct: 82 ggtggtgccggagtcggtgctgaagaagcggaagcgggaggagcagtgggcggcggacag 141 Query: 126 gaagaccaaggccgtcgaggagaagaagaagtcgacggagaaccgcaaggtcatcttcgc 185 |||| ||||| ||| |||||||||||| | |||| ||||||| |||||||||| Sbjct: 142 gaaggagaaggcgctcgccgagaagaagaaggccgtcgagagccgcaagctcatcttcgc 201 Query: 186 ccgcgccaagcagtacgccgaggagtacgatgcacaggacaaggagttggttcagcttaa 245 ||||||||||||||||||| |||||||||| || ||||| |||||| | || ||||| || Sbjct: 202 ccgcgccaagcagtacgcccaggagtacgacgcgcaggagaaggagcttgtgcagctcaa 261 Query: 246 gcgtgaggcccggatgaagggtgggttctatgtcagtcctgaggctaagttgctgtttgt 305 ||||||||| |||||||||||||||||||| ||||| |||||||| || | |||||||| Sbjct: 262 gcgtgaggctcggatgaagggtgggttctacgtcagccctgaggccaaacttctgtttgt 321 Query: 306 tgtccgaatcagaggtatcaatgccatgcacccaaagaccaagaagatcctccagctttt 365 ||||| ||| | |||||||||||||||||||| ||||||| ||||||| | |||||| | Sbjct: 322 ggtccgcatccgtggtatcaatgccatgcaccccaagaccaggaagatcttgcagcttct 381 Query: 366 gcgtttgagacagatattcaatggagtgttcctcaaggttaacaaggccaccatcaacat 425 ||| ||||| ||||| |||||||| || |||||||||||||||||||| ||||| ||||| Sbjct: 382 gcggttgaggcagatcttcaatggtgtcttcctcaaggttaacaaggcaaccattaacat 441 Query: 426 gctccgcagggtcgagccatatgttgcatatgggtacccgaacctgaagagtgtgaggga 485 ||| |||||||| |||||||||||||||||||||||||| |||||||| ||||| ||||| Sbjct: 442 gctgcgcagggttgagccatatgttgcatatgggtacccaaacctgaaaagtgtcaggga 501 Query: 486 gttgatctacaagagaggttatggaaagctcaacaagcaaaggattcctctgaccaacaa 545 |||||||||||||| ||||| ||||||||||||||||| ||||||||||| ||||| Sbjct: 502 attgatctacaagaggggttacggaaagctcaacaagcagaggattcctcttcagaacaa 561 Query: 546 caaggtcatcgaggagggtcttggaaagcacaacatcatctgcattgaagacgttgtcca 605 ||| ||||| |||||||| | || ||||| |||||||||||||||| || ||||||| Sbjct: 562 caaagtcattgaggagggcttggggaagcatgacatcatctgcattgaggatcttgtcca 621 Query: 606 cgagatcttgac 617 ||||||| |||| Sbjct: 622 cgagatcatgac 633
>gb|AY103677.1| Zea mays PCO099976 mRNA sequence Length = 1103 Score = 410 bits (207), Expect = e-111 Identities = 405/471 (85%) Strand = Plus / Plus Query: 163 gagaaccgcaaggtcatcttcgcccgcgccaagcagtacgccgaggagtacgatgcacag 222 |||| ||||||| |||||||||||||||||||||||||||||||||||||| | || ||| Sbjct: 234 gagagccgcaagatcatcttcgcccgcgccaagcagtacgccgaggagtaccacgcccag 293 Query: 223 gacaaggagttggttcagcttaagcgtgaggcccggatgaagggtgggttctatgtcagt 282 || |||||| | || ||||| ||||||||||||||| ||||||||||||||||||| || Sbjct: 294 gagaaggagcttgtgcagctcaagcgtgaggcccggttgaagggtgggttctatgtgagc 353 Query: 283 cctgaggctaagttgctgtttgttgtccgaatcagaggtatcaatgccatgcacccaaag 342 || ||||| ||| | |||||||| || || ||| | |||||||||||||||||||| ||| Sbjct: 354 ccagaggccaagcttctgtttgtggttcgcatccgtggtatcaatgccatgcaccccaag 413 Query: 343 accaagaagatcctccagcttttgcgtttgagacagatattcaatggagtgttcctcaag 402 ||| |||||| | ||||| |||| ||||| ||||| ||||| || || ||||||||| Sbjct: 414 acccgcaagatcttgcagctcctgcgattgaggcagatcttcaacggtgtcttcctcaag 473 Query: 403 gttaacaaggccaccatcaacatgctccgcagggtcgagccatatgttgcatatgggtac 462 ||||||||||| ||||| |||||||| |||||||| |||||||||||||| || || ||| Sbjct: 474 gttaacaaggcaaccattaacatgctgcgcagggtggagccatatgttgcgtacggatac 533 Query: 463 ccgaacctgaagagtgtgagggagttgatctacaagagaggttatggaaagctcaacaag 522 || ||||||||||| || |||||||| ||||||||||||||||| || ||||| |||||| Sbjct: 534 cccaacctgaagagcgttagggagttaatctacaagagaggttacgggaagctgaacaag 593 Query: 523 caaaggattcctctgaccaacaacaaggtcatcgaggagggtcttggaaagcacaacatc 582 || |||||||| || | |||||||| ||||| |||||||| || || |||||||| ||| Sbjct: 594 cagaggattccacttagcaacaacagtgtcatagaggagggcctcgggaagcacaatatc 653 Query: 583 atctgcattgaagacgttgtccacgagatcttgacggttggccctcacttc 633 ||||||||||| ||| |||||||||||||| ||||||| ||||| |||||| Sbjct: 654 atctgcattgaggaccttgtccacgagatcatgacggtcggcccgcacttc 704
>dbj|AK061680.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-A02, full insert sequence Length = 594 Score = 194 bits (98), Expect = 2e-46 Identities = 170/194 (87%) Strand = Plus / Plus Query: 424 atgctccgcagggtcgagccatatgttgcatatgggtacccgaacctgaagagtgtgagg 483 ||||| |||||||| |||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 1 atgctgcgcagggttgagccatatgttgcatatgggtacccaaacctgaagagtgtcagg 60 Query: 484 gagttgatctacaagagaggttatggaaagctcaacaagcaaaggattcctctgaccaac 543 || |||||||||||||| ||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 61 gaattgatctacaagaggggttacggaaagctcaacaagcagaggattcctcttcagaac 120 Query: 544 aacaaggtcatcgaggagggtcttggaaagcacaacatcatctgcattgaagacgttgtc 603 ||||| ||||| |||||||| | || ||||| |||||||||||||||| || ||||| Sbjct: 121 aacaaagtcattgaggagggcttggggaagcatgacatcatctgcattgaggatcttgtc 180 Query: 604 cacgagatcttgac 617 ||||||||| |||| Sbjct: 181 cacgagatcatgac 194
>emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015N08, complete sequence Length = 129037 Score = 155 bits (78), Expect = 2e-34 Identities = 147/169 (86%), Gaps = 1/169 (0%) Strand = Plus / Plus Query: 48 cgtccgnggcggcgaag-tggtggtgccggagtcggtgctcctcaagaggaagcgggagg 106 |||||| |||||| ||| |||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 109853 cgtccgaggcggccaaggtggtggtgccggagtccgtgctccgcaagaggaagcgggagg 109912 Query: 107 agctctgggccgccgagaagaagaccaaggccgtcgaggagaagaagaagtcgacggaga 166 || | ||||| |||| || ||| |||||||||| |||||||||||||| | |||| Sbjct: 109913 aggtgtgggcggccgcgagcaaggagaaggccgtcgccgagaagaagaagtccatcgaga 109972 Query: 167 accgcaaggtcatcttcgcccgcgccaagcagtacgccgaggagtacga 215 ||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 109973 gccgcaagctcatcttctcccgcgccaagcagtacgccgaggagtacga 110021 Score = 103 bits (52), Expect = 7e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 220 caggacaaggagttggttcagcttaagcgtgaggcccggatgaagggtgggttctatgtc 279 ||||| |||||| |||| || |||||||||||||| |||||||||||||| ||||||||| Sbjct: 110622 caggagaaggagctggtgcaacttaagcgtgaggctcggatgaagggtggtttctatgtc 110681 Query: 280 agtcctgaggctaagttgctgtttgttgtccg 311 || ||||||| |||||||||||||| ||||| Sbjct: 110682 agccctgaggaaaagttgctgtttgtggtccg 110713 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Plus Query: 376 cagatattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcagg 435 ||||| || |||||||||||| | ||||| ||||| |||||||| |||||||| |||||| Sbjct: 110964 cagatctttaatggagtgttcttgaaggtcaacaaagccaccattaacatgctgcgcagg 111023 Query: 436 gtcgagccatatgttgcatatgggta 461 || ||||||||||||||||||||||| Sbjct: 111024 gttgagccatatgttgcatatgggta 111049 Score = 97.6 bits (49), Expect = 4e-17 Identities = 82/93 (88%) Strand = Plus / Plus Query: 470 tgaagagtgtgagggagttgatctacaagagaggttatggaaagctcaacaagcaaagga 529 |||||||||| | || |||||||||||||| || ||||||||||||||||||||||| | Sbjct: 111405 tgaagagtgtccgtgaattgatctacaagaggggctatggaaagctcaacaagcaaagaa 111464 Query: 530 ttcctctgaccaacaacaaggtcatcgaggagg 562 | ||||| || |||||||| ||||||||||||| Sbjct: 111465 tccctcttacaaacaacaaagtcatcgaggagg 111497 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 320 gtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgag 374 ||||||||||||||||||| ||||||| |||||| | ||||| ||||||||||| Sbjct: 110820 gtatcaatgccatgcacccgaagaccaggaagattttgcagctcttgcgtttgag 110874 Score = 42.1 bits (21), Expect = 2.2 Identities = 42/49 (85%) Strand = Plus / Plus Query: 578 acatcatctgcattgaagacgttgtccacgagatcttgacggttggccc 626 |||||||||||||||| || |||| || |||||| |||| |||||||| Sbjct: 111589 acatcatctgcattgaggatcttgttcatgagatcatgactgttggccc 111637
>emb|AL662968.3|OSJN00168 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0035M09, complete sequence Length = 152732 Score = 155 bits (78), Expect = 2e-34 Identities = 147/169 (86%), Gaps = 1/169 (0%) Strand = Plus / Plus Query: 48 cgtccgnggcggcgaag-tggtggtgccggagtcggtgctcctcaagaggaagcgggagg 106 |||||| |||||| ||| |||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 37876 cgtccgaggcggccaaggtggtggtgccggagtccgtgctccgcaagaggaagcgggagg 37935 Query: 107 agctctgggccgccgagaagaagaccaaggccgtcgaggagaagaagaagtcgacggaga 166 || | ||||| |||| || ||| |||||||||| |||||||||||||| | |||| Sbjct: 37936 aggtgtgggcggccgcgagcaaggagaaggccgtcgccgagaagaagaagtccatcgaga 37995 Query: 167 accgcaaggtcatcttcgcccgcgccaagcagtacgccgaggagtacga 215 ||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 37996 gccgcaagctcatcttctcccgcgccaagcagtacgccgaggagtacga 38044 Score = 103 bits (52), Expect = 7e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 220 caggacaaggagttggttcagcttaagcgtgaggcccggatgaagggtgggttctatgtc 279 ||||| |||||| |||| || |||||||||||||| |||||||||||||| ||||||||| Sbjct: 38645 caggagaaggagctggtgcaacttaagcgtgaggctcggatgaagggtggtttctatgtc 38704 Query: 280 agtcctgaggctaagttgctgtttgttgtccg 311 || ||||||| |||||||||||||| ||||| Sbjct: 38705 agccctgaggaaaagttgctgtttgtggtccg 38736 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Plus Query: 376 cagatattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcagg 435 ||||| || |||||||||||| | ||||| ||||| |||||||| |||||||| |||||| Sbjct: 38987 cagatctttaatggagtgttcttgaaggtcaacaaagccaccattaacatgctgcgcagg 39046 Query: 436 gtcgagccatatgttgcatatgggta 461 || ||||||||||||||||||||||| Sbjct: 39047 gttgagccatatgttgcatatgggta 39072 Score = 97.6 bits (49), Expect = 4e-17 Identities = 82/93 (88%) Strand = Plus / Plus Query: 470 tgaagagtgtgagggagttgatctacaagagaggttatggaaagctcaacaagcaaagga 529 |||||||||| | || |||||||||||||| || ||||||||||||||||||||||| | Sbjct: 39428 tgaagagtgtccgtgaattgatctacaagaggggctatggaaagctcaacaagcaaagaa 39487 Query: 530 ttcctctgaccaacaacaaggtcatcgaggagg 562 | ||||| || |||||||| ||||||||||||| Sbjct: 39488 tccctcttacaaacaacaaagtcatcgaggagg 39520 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 320 gtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgag 374 ||||||||||||||||||| ||||||| |||||| | ||||| ||||||||||| Sbjct: 38843 gtatcaatgccatgcacccgaagaccaggaagattttgcagctcttgcgtttgag 38897 Score = 42.1 bits (21), Expect = 2.2 Identities = 42/49 (85%) Strand = Plus / Plus Query: 578 acatcatctgcattgaagacgttgtccacgagatcttgacggttggccc 626 |||||||||||||||| || |||| || |||||| |||| |||||||| Sbjct: 39612 acatcatctgcattgaggatcttgttcatgagatcatgactgttggccc 39660
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 155 bits (78), Expect = 2e-34 Identities = 147/169 (86%), Gaps = 1/169 (0%) Strand = Plus / Plus Query: 48 cgtccgnggcggcgaag-tggtggtgccggagtcggtgctcctcaagaggaagcgggagg 106 |||||| |||||| ||| |||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 30634145 cgtccgaggcggccaaggtggtggtgccggagtccgtgctccgcaagaggaagcgggagg 30634204 Query: 107 agctctgggccgccgagaagaagaccaaggccgtcgaggagaagaagaagtcgacggaga 166 || | ||||| |||| || ||| |||||||||| |||||||||||||| | |||| Sbjct: 30634205 aggtgtgggcggccgcgagcaaggagaaggccgtcgccgagaagaagaagtccatcgaga 30634264 Query: 167 accgcaaggtcatcttcgcccgcgccaagcagtacgccgaggagtacga 215 ||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 30634265 gccgcaagctcatcttctcccgcgccaagcagtacgccgaggagtacga 30634313 Score = 103 bits (52), Expect = 7e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 220 caggacaaggagttggttcagcttaagcgtgaggcccggatgaagggtgggttctatgtc 279 ||||| |||||| |||| || |||||||||||||| |||||||||||||| ||||||||| Sbjct: 30634914 caggagaaggagctggtgcaacttaagcgtgaggctcggatgaagggtggtttctatgtc 30634973 Query: 280 agtcctgaggctaagttgctgtttgttgtccg 311 || ||||||| |||||||||||||| ||||| Sbjct: 30634974 agccctgaggaaaagttgctgtttgtggtccg 30635005 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Plus Query: 376 cagatattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcagg 435 ||||| || |||||||||||| | ||||| ||||| |||||||| |||||||| |||||| Sbjct: 30635256 cagatctttaatggagtgttcttgaaggtcaacaaagccaccattaacatgctgcgcagg 30635315 Query: 436 gtcgagccatatgttgcatatgggta 461 || ||||||||||||||||||||||| Sbjct: 30635316 gttgagccatatgttgcatatgggta 30635341 Score = 97.6 bits (49), Expect = 4e-17 Identities = 82/93 (88%) Strand = Plus / Plus Query: 470 tgaagagtgtgagggagttgatctacaagagaggttatggaaagctcaacaagcaaagga 529 |||||||||| | || |||||||||||||| || ||||||||||||||||||||||| | Sbjct: 30635697 tgaagagtgtccgtgaattgatctacaagaggggctatggaaagctcaacaagcaaagaa 30635756 Query: 530 ttcctctgaccaacaacaaggtcatcgaggagg 562 | ||||| || |||||||| ||||||||||||| Sbjct: 30635757 tccctcttacaaacaacaaagtcatcgaggagg 30635789 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 320 gtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgag 374 ||||||||||||||||||| ||||||| |||||| | ||||| ||||||||||| Sbjct: 30635112 gtatcaatgccatgcacccgaagaccaggaagattttgcagctcttgcgtttgag 30635166 Score = 42.1 bits (21), Expect = 2.2 Identities = 42/49 (85%) Strand = Plus / Plus Query: 578 acatcatctgcattgaagacgttgtccacgagatcttgacggttggccc 626 |||||||||||||||| || |||| || |||||| |||| |||||||| Sbjct: 30635881 acatcatctgcattgaggatcttgttcatgagatcatgactgttggccc 30635929
>ref|NM_126186.2| Arabidopsis thaliana structural constituent of ribosome / transcription regulator AT2G01250 mRNA, complete cds Length = 1051 Score = 137 bits (69), Expect = 5e-29 Identities = 165/197 (83%) Strand = Plus / Plus Query: 319 ggtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 378 |||||||||||||| |||| ||||| |||||||| |||||||| ||||||||||||||| Sbjct: 347 ggtatcaatgccattgaccctaagactaagaagattctccagctcttgcgtttgagacag 406 Query: 379 atattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcagggtc 438 || |||||||| || ||||| || || |||||||| || || |||||||| ||| | || Sbjct: 407 attttcaatggtgttttccttaaagtcaacaaggctacgatgaacatgcttcgccgtgtt 466 Query: 439 gagccatatgttgcatatgggtacccgaacctgaagagtgtgagggagttgatctacaag 498 ||||| ||||| | || || | ||| ||| |||||||||| | ||| |||||||||||| Sbjct: 467 gagccctatgtcacttacggattccctaacttgaagagtgtcaaggaattgatctacaag 526 Query: 499 agaggttatggaaagct 515 |||||||| |||||||| Sbjct: 527 agaggttacggaaagct 543
>gb|AY081698.1| Arabidopsis thaliana 60S ribosomal protein L7 (At2g01250) mRNA, complete cds Length = 751 Score = 137 bits (69), Expect = 5e-29 Identities = 165/197 (83%) Strand = Plus / Plus Query: 319 ggtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 378 |||||||||||||| |||| ||||| |||||||| |||||||| ||||||||||||||| Sbjct: 271 ggtatcaatgccattgaccctaagactaagaagattctccagctcttgcgtttgagacag 330 Query: 379 atattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcagggtc 438 || |||||||| || ||||| || || |||||||| || || |||||||| ||| | || Sbjct: 331 attttcaatggtgttttccttaaagtcaacaaggctacgatgaacatgcttcgccgtgtt 390 Query: 439 gagccatatgttgcatatgggtacccgaacctgaagagtgtgagggagttgatctacaag 498 ||||| ||||| | || || | ||| ||| |||||||||| | ||| |||||||||||| Sbjct: 391 gagccctatgtcacttacggattccctaacttgaagagtgtcaaggaattgatctacaag 450 Query: 499 agaggttatggaaagct 515 |||||||| |||||||| Sbjct: 451 agaggttacggaaagct 467
>gb|AF370484.1|AF370484 Arabidopsis thaliana 60S ribosomal protein L7 (At2g01250; F10A8.13) mRNA, complete cds Length = 915 Score = 137 bits (69), Expect = 5e-29 Identities = 165/197 (83%) Strand = Plus / Plus Query: 319 ggtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 378 |||||||||||||| |||| ||||| |||||||| |||||||| ||||||||||||||| Sbjct: 318 ggtatcaatgccattgaccctaagactaagaagattctccagctcttgcgtttgagacag 377 Query: 379 atattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcagggtc 438 || |||||||| || ||||| || || |||||||| || || |||||||| ||| | || Sbjct: 378 attttcaatggtgttttccttaaagtcaacaaggctacgatgaacatgcttcgccgtgtt 437 Query: 439 gagccatatgttgcatatgggtacccgaacctgaagagtgtgagggagttgatctacaag 498 ||||| ||||| | || || | ||| ||| |||||||||| | ||| |||||||||||| Sbjct: 438 gagccctatgtcacttacggattccctaacttgaagagtgtcaaggaattgatctacaag 497 Query: 499 agaggttatggaaagct 515 |||||||| |||||||| Sbjct: 498 agaggttacggaaagct 514
>gb|AY085139.1| Arabidopsis thaliana clone 13298 mRNA, complete sequence Length = 996 Score = 137 bits (69), Expect = 5e-29 Identities = 165/197 (83%) Strand = Plus / Plus Query: 319 ggtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 378 |||||||||||||| |||| ||||| |||||||| |||||||| ||||||||||||||| Sbjct: 347 ggtatcaatgccattgaccctaagactaagaagattctccagctcttgcgtttgagacag 406 Query: 379 atattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcagggtc 438 || |||||||| || ||||| || || |||||||| || || |||||||| ||| | || Sbjct: 407 attttcaatggtgttttccttaaagtcaacaaggctacgatgaacatgcttcgccgtgtt 466 Query: 439 gagccatatgttgcatatgggtacccgaacctgaagagtgtgagggagttgatctacaag 498 ||||| ||||| | || || | ||| ||| |||||||||| | ||| |||||||||||| Sbjct: 467 gagccctatgtcacttacggattccctaacttgaagagtgtcaaggaattgatctacaag 526 Query: 499 agaggttatggaaagct 515 |||||||| |||||||| Sbjct: 527 agaggttacggaaagct 543
>gb|AY079328.1| Arabidopsis thaliana putative ribosomal protein L7 (At2g01250) mRNA, complete cds Length = 760 Score = 129 bits (65), Expect = 1e-26 Identities = 164/197 (83%) Strand = Plus / Plus Query: 319 ggtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 378 |||||||||||||| |||| ||||| |||||||| |||||||| ||||||||||| ||| Sbjct: 271 ggtatcaatgccattgaccctaagactaagaagattctccagctcttgcgtttgaggcag 330 Query: 379 atattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcagggtc 438 || |||||||| || ||||| || || |||||||| || || |||||||| ||| | || Sbjct: 331 attttcaatggtgttttccttaaagtcaacaaggctacgatgaacatgcttcgccgtgtt 390 Query: 439 gagccatatgttgcatatgggtacccgaacctgaagagtgtgagggagttgatctacaag 498 ||||| ||||| | || || | ||| ||| |||||||||| | ||| |||||||||||| Sbjct: 391 gagccctatgtcacttacggattccctaacttgaagagtgtcaaggaattgatctacaag 450 Query: 499 agaggttatggaaagct 515 |||||||| |||||||| Sbjct: 451 agaggttacggaaagct 467
>gb|AY045994.1| Arabidopsis thaliana putative ribosomal protein L7 (At2g01250) mRNA, complete cds Length = 960 Score = 129 bits (65), Expect = 1e-26 Identities = 164/197 (83%) Strand = Plus / Plus Query: 319 ggtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 378 |||||||||||||| |||| ||||| |||||||| |||||||| ||||||||||| ||| Sbjct: 320 ggtatcaatgccattgaccctaagactaagaagattctccagctcttgcgtttgaggcag 379 Query: 379 atattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcagggtc 438 || |||||||| || ||||| || || |||||||| || || |||||||| ||| | || Sbjct: 380 attttcaatggtgttttccttaaagtcaacaaggctacgatgaacatgcttcgccgtgtt 439 Query: 439 gagccatatgttgcatatgggtacccgaacctgaagagtgtgagggagttgatctacaag 498 ||||| ||||| | || || | ||| ||| |||||||||| | ||| |||||||||||| Sbjct: 440 gagccctatgtcacttacggattccctaacttgaagagtgtcaaggaattgatctacaag 499 Query: 499 agaggttatggaaagct 515 |||||||| |||||||| Sbjct: 500 agaggttacggaaagct 516
>ref|NM_202576.1| Arabidopsis thaliana structural constituent of ribosome / transcription regulator AT3G13580 transcript variant AT3G13580.3 mRNA, complete cds Length = 1569 Score = 121 bits (61), Expect = 3e-24 Identities = 163/197 (82%) Strand = Plus / Plus Query: 319 ggtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 378 |||||||||||||| |||||||||| |||||||| | || ||||||||||| |||||| Sbjct: 915 ggtatcaatgccattgacccaaagacaaagaagattttgcaacttttgcgtttaagacag 974 Query: 379 atattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcagggtc 438 || |||||||| |||||| | ||||| |||||||| ||||| |||||||| ||| | || Sbjct: 975 attttcaatggtgtgttcttgaaggtcaacaaggcaaccattaacatgcttcgccgtgtt 1034 Query: 439 gagccatatgttgcatatgggtacccgaacctgaagagtgtgagggagttgatctacaag 498 || || ||||| | ||||| ||||||||| | || ||||||| ||| ||||| ||||| Sbjct: 1035 gaaccctatgtaacctatggatacccgaacttaaaaagtgtgaaggaattgatttacaaa 1094 Query: 499 agaggttatggaaagct 515 |||||| ||||||||| Sbjct: 1095 cgaggttttggaaagct 1111
>ref|NM_202575.1| Arabidopsis thaliana structural constituent of ribosome / transcription regulator AT3G13580 transcript variant AT3G13580.2 mRNA, complete cds Length = 1225 Score = 121 bits (61), Expect = 3e-24 Identities = 163/197 (82%) Strand = Plus / Plus Query: 319 ggtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 378 |||||||||||||| |||||||||| |||||||| | || ||||||||||| |||||| Sbjct: 571 ggtatcaatgccattgacccaaagacaaagaagattttgcaacttttgcgtttaagacag 630 Query: 379 atattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcagggtc 438 || |||||||| |||||| | ||||| |||||||| ||||| |||||||| ||| | || Sbjct: 631 attttcaatggtgtgttcttgaaggtcaacaaggcaaccattaacatgcttcgccgtgtt 690 Query: 439 gagccatatgttgcatatgggtacccgaacctgaagagtgtgagggagttgatctacaag 498 || || ||||| | ||||| ||||||||| | || ||||||| ||| ||||| ||||| Sbjct: 691 gaaccctatgtaacctatggatacccgaacttaaaaagtgtgaaggaattgatttacaaa 750 Query: 499 agaggttatggaaagct 515 |||||| ||||||||| Sbjct: 751 cgaggttttggaaagct 767
>ref|NM_112204.2| Arabidopsis thaliana structural constituent of ribosome / transcription regulator AT3G13580 transcript variant AT3G13580.1 mRNA, complete cds Length = 995 Score = 121 bits (61), Expect = 3e-24 Identities = 163/197 (82%) Strand = Plus / Plus Query: 319 ggtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 378 |||||||||||||| |||||||||| |||||||| | || ||||||||||| |||||| Sbjct: 341 ggtatcaatgccattgacccaaagacaaagaagattttgcaacttttgcgtttaagacag 400 Query: 379 atattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcagggtc 438 || |||||||| |||||| | ||||| |||||||| ||||| |||||||| ||| | || Sbjct: 401 attttcaatggtgtgttcttgaaggtcaacaaggcaaccattaacatgcttcgccgtgtt 460 Query: 439 gagccatatgttgcatatgggtacccgaacctgaagagtgtgagggagttgatctacaag 498 || || ||||| | ||||| ||||||||| | || ||||||| ||| ||||| ||||| Sbjct: 461 gaaccctatgtaacctatggatacccgaacttaaaaagtgtgaaggaattgatttacaaa 520 Query: 499 agaggttatggaaagct 515 |||||| ||||||||| Sbjct: 521 cgaggttttggaaagct 537
>ref|NM_180079.1| Arabidopsis thaliana structural constituent of ribosome / transcription regulator AT2G44120 transcript variant AT2G44120.1 mRNA, complete cds Length = 981 Score = 121 bits (61), Expect = 3e-24 Identities = 190/233 (81%) Strand = Plus / Plus Query: 283 cctgaggctaagttgctgtttgttgtccgaatcagaggtatcaatgccatgcacccaaag 342 ||||||||||||||||| ||| | | || ||| | |||||||||||||| ||||||| Sbjct: 314 cctgaggctaagttgctctttatcattcgtatccgtggtatcaatgccattgacccaaaa 373 Query: 343 accaagaagatcctccagcttttgcgtttgagacagatattcaatggagtgttcctcaag 402 ||||||||||| || ||||| |||||||||||||||| |||||||| ||||| || ||| Sbjct: 374 accaagaagattctgcagctcctgcgtttgagacagatcttcaatggtgtgtttcttaag 433 Query: 403 gttaacaaggccaccatcaacatgctccgcagggtcgagccatatgttgcatatgggtac 462 || |||||||| || | |||||||| ||| | || || ||||| || | || || ||| Sbjct: 434 gtgaacaaggcaacagtaaacatgctgcgccgagttgaaccatacgtgacttacggatac 493 Query: 463 ccgaacctgaagagtgtgagggagttgatctacaagagaggttatggaaagct 515 || ||| ||||||| || | ||| |||||||||| ||||||||||||||||| Sbjct: 494 ccaaacttgaagagcgttaaggaactgatctacaaaagaggttatggaaagct 546 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 602 tccacgagatcttgacggttggccctcacttc 633 ||||||||||| |||| ||||| ||||||||| Sbjct: 633 tccacgagatcatgactgttggacctcacttc 664
>ref|NM_180080.1| Arabidopsis thaliana structural constituent of ribosome / transcription regulator AT2G44120 transcript variant AT2G44120.2 mRNA, complete cds Length = 1220 Score = 121 bits (61), Expect = 3e-24 Identities = 190/233 (81%) Strand = Plus / Plus Query: 283 cctgaggctaagttgctgtttgttgtccgaatcagaggtatcaatgccatgcacccaaag 342 ||||||||||||||||| ||| | | || ||| | |||||||||||||| ||||||| Sbjct: 541 cctgaggctaagttgctctttatcattcgtatccgtggtatcaatgccattgacccaaaa 600 Query: 343 accaagaagatcctccagcttttgcgtttgagacagatattcaatggagtgttcctcaag 402 ||||||||||| || ||||| |||||||||||||||| |||||||| ||||| || ||| Sbjct: 601 accaagaagattctgcagctcctgcgtttgagacagatcttcaatggtgtgtttcttaag 660 Query: 403 gttaacaaggccaccatcaacatgctccgcagggtcgagccatatgttgcatatgggtac 462 || |||||||| || | |||||||| ||| | || || ||||| || | || || ||| Sbjct: 661 gtgaacaaggcaacagtaaacatgctgcgccgagttgaaccatacgtgacttacggatac 720 Query: 463 ccgaacctgaagagtgtgagggagttgatctacaagagaggttatggaaagct 515 || ||| ||||||| || | ||| |||||||||| ||||||||||||||||| Sbjct: 721 ccaaacttgaagagcgttaaggaactgatctacaaaagaggttatggaaagct 773 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 602 tccacgagatcttgacggttggccctcacttc 633 ||||||||||| |||| ||||| ||||||||| Sbjct: 860 tccacgagatcatgactgttggacctcacttc 891
>gb|AY081474.1| Arabidopsis thaliana 60S ribosomal protein L7 (At2g44120) mRNA, complete cds Length = 782 Score = 121 bits (61), Expect = 3e-24 Identities = 190/233 (81%) Strand = Plus / Plus Query: 283 cctgaggctaagttgctgtttgttgtccgaatcagaggtatcaatgccatgcacccaaag 342 ||||||||||||||||| ||| | | || ||| | |||||||||||||| ||||||| Sbjct: 235 cctgaggctaagttgctctttatcattcgtatccgtggtatcaatgccattgacccaaaa 294 Query: 343 accaagaagatcctccagcttttgcgtttgagacagatattcaatggagtgttcctcaag 402 ||||||||||| || ||||| |||||||||||||||| |||||||| ||||| || ||| Sbjct: 295 accaagaagattctgcagctcctgcgtttgagacagatcttcaatggtgtgtttcttaag 354 Query: 403 gttaacaaggccaccatcaacatgctccgcagggtcgagccatatgttgcatatgggtac 462 || |||||||| || | |||||||| ||| | || || ||||| || | || || ||| Sbjct: 355 gtgaacaaggcaacagtaaacatgctgcgccgagttgaaccatacgtgacttacggatac 414 Query: 463 ccgaacctgaagagtgtgagggagttgatctacaagagaggttatggaaagct 515 || ||| ||||||| || | ||| |||||||||| ||||||||||||||||| Sbjct: 415 ccaaacttgaagagcgttaaggaactgatctacaaaagaggttatggaaagct 467 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 602 tccacgagatcttgacggttggccctcacttc 633 ||||||||||| |||| ||||| ||||||||| Sbjct: 554 tccacgagatcatgactgttggacctcacttc 585
>gb|AY077675.1| Arabidopsis thaliana AT3g13580/K20M4_2 mRNA, complete cds Length = 735 Score = 121 bits (61), Expect = 3e-24 Identities = 163/197 (82%) Strand = Plus / Plus Query: 319 ggtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 378 |||||||||||||| |||||||||| |||||||| | || ||||||||||| |||||| Sbjct: 277 ggtatcaatgccattgacccaaagacaaagaagattttgcaacttttgcgtttaagacag 336 Query: 379 atattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcagggtc 438 || |||||||| |||||| | ||||| |||||||| ||||| |||||||| ||| | || Sbjct: 337 attttcaatggtgtgttcttgaaggtcaacaaggcaaccattaacatgcttcgccgtgtt 396 Query: 439 gagccatatgttgcatatgggtacccgaacctgaagagtgtgagggagttgatctacaag 498 || || ||||| | ||||| ||||||||| | || ||||||| ||| ||||| ||||| Sbjct: 397 gaaccctatgtaacctatggatacccgaacttaaaaagtgtgaaggaattgatttacaaa 456 Query: 499 agaggttatggaaagct 515 |||||| ||||||||| Sbjct: 457 cgaggttttggaaagct 473
>gb|AY065196.1| Arabidopsis thaliana 60S ribosomal protein L7 (F6E13.25; At2g44120) mRNA, complete cds Length = 888 Score = 121 bits (61), Expect = 3e-24 Identities = 190/233 (81%) Strand = Plus / Plus Query: 283 cctgaggctaagttgctgtttgttgtccgaatcagaggtatcaatgccatgcacccaaag 342 ||||||||||||||||| ||| | | || ||| | |||||||||||||| ||||||| Sbjct: 277 cctgaggctaagttgctctttatcattcgtatccgtggtatcaatgccattgacccaaaa 336 Query: 343 accaagaagatcctccagcttttgcgtttgagacagatattcaatggagtgttcctcaag 402 ||||||||||| || ||||| |||||||||||||||| |||||||| ||||| || ||| Sbjct: 337 accaagaagattctgcagctcctgcgtttgagacagatcttcaatggtgtgtttcttaag 396 Query: 403 gttaacaaggccaccatcaacatgctccgcagggtcgagccatatgttgcatatgggtac 462 || |||||||| || | |||||||| ||| | || || ||||| || | || || ||| Sbjct: 397 gtgaacaaggcaacagtaaacatgctgcgccgagttgaaccatacgtgacttacggatac 456 Query: 463 ccgaacctgaagagtgtgagggagttgatctacaagagaggttatggaaagct 515 || ||| ||||||| || | ||| |||||||||| ||||||||||||||||| Sbjct: 457 ccaaacttgaagagcgttaaggaactgatctacaaaagaggttatggaaagct 509 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 602 tccacgagatcttgacggttggccctcacttc 633 ||||||||||| |||| ||||| ||||||||| Sbjct: 596 tccacgagatcatgactgttggacctcacttc 627
>gb|AF446884.1|AF446884 Arabidopsis thaliana At2g44120/F6E13.25 mRNA, complete cds Length = 729 Score = 121 bits (61), Expect = 3e-24 Identities = 190/233 (81%) Strand = Plus / Plus Query: 283 cctgaggctaagttgctgtttgttgtccgaatcagaggtatcaatgccatgcacccaaag 342 ||||||||||||||||| ||| | | || ||| | |||||||||||||| ||||||| Sbjct: 235 cctgaggctaagttgctctttatcattcgtatccgtggtatcaatgccattgacccaaaa 294 Query: 343 accaagaagatcctccagcttttgcgtttgagacagatattcaatggagtgttcctcaag 402 ||||||||||| || ||||| |||||||||||||||| |||||||| ||||| || ||| Sbjct: 295 accaagaagattctgcagctcctgcgtttgagacagatcttcaatggtgtgtttcttaag 354 Query: 403 gttaacaaggccaccatcaacatgctccgcagggtcgagccatatgttgcatatgggtac 462 || |||||||| || | |||||||| ||| | || || ||||| || | || || ||| Sbjct: 355 gtgaacaaggcaacagtaaacatgctgcgccgagttgaaccatacgtgacttacggatac 414 Query: 463 ccgaacctgaagagtgtgagggagttgatctacaagagaggttatggaaagct 515 || ||| ||||||| || | ||| |||||||||| ||||||||||||||||| Sbjct: 415 ccaaacttgaagagcgttaaggaactgatctacaaaagaggttatggaaagct 467 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 602 tccacgagatcttgacggttggccctcacttc 633 ||||||||||| |||| ||||| ||||||||| Sbjct: 554 tccacgagatcatgactgttggacctcacttc 585
>gb|AY056112.1| Arabidopsis thaliana AT3g13580/K20M4_2 mRNA, complete cds Length = 971 Score = 121 bits (61), Expect = 3e-24 Identities = 163/197 (82%) Strand = Plus / Plus Query: 319 ggtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 378 |||||||||||||| |||||||||| |||||||| | || ||||||||||| |||||| Sbjct: 341 ggtatcaatgccattgacccaaagacaaagaagattttgcaacttttgcgtttaagacag 400 Query: 379 atattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcagggtc 438 || |||||||| |||||| | ||||| |||||||| ||||| |||||||| ||| | || Sbjct: 401 attttcaatggtgtgttcttgaaggtcaacaaggcaaccattaacatgcttcgccgtgtt 460 Query: 439 gagccatatgttgcatatgggtacccgaacctgaagagtgtgagggagttgatctacaag 498 || || ||||| | ||||| ||||||||| | || ||||||| ||| ||||| ||||| Sbjct: 461 gaaccctatgtaacctatggatacccgaacttaaaaagtgtgaaggaattgatttacaaa 520 Query: 499 agaggttatggaaagct 515 |||||| ||||||||| Sbjct: 521 cgaggttttggaaagct 537
>gb|AY052724.1| Arabidopsis thaliana At2g44120/F6E13.25 mRNA, complete cds Length = 905 Score = 121 bits (61), Expect = 3e-24 Identities = 190/233 (81%) Strand = Plus / Plus Query: 283 cctgaggctaagttgctgtttgttgtccgaatcagaggtatcaatgccatgcacccaaag 342 ||||||||||||||||| ||| | | || ||| | |||||||||||||| ||||||| Sbjct: 277 cctgaggctaagttgctctttatcattcgtatccgtggtatcaatgccattgacccaaaa 336 Query: 343 accaagaagatcctccagcttttgcgtttgagacagatattcaatggagtgttcctcaag 402 ||||||||||| || ||||| |||||||||||||||| |||||||| ||||| || ||| Sbjct: 337 accaagaagattctgcagctcctgcgtttgagacagatcttcaatggtgtgtttcttaag 396 Query: 403 gttaacaaggccaccatcaacatgctccgcagggtcgagccatatgttgcatatgggtac 462 || |||||||| || | |||||||| ||| | || || ||||| || | || || ||| Sbjct: 397 gtgaacaaggcaacagtaaacatgctgcgccgagttgaaccatacgtgacttacggatac 456 Query: 463 ccgaacctgaagagtgtgagggagttgatctacaagagaggttatggaaagct 515 || ||| ||||||| || | ||| |||||||||| ||||||||||||||||| Sbjct: 457 ccaaacttgaagagcgttaaggaactgatctacaaaagaggttatggaaagct 509 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 602 tccacgagatcttgacggttggccctcacttc 633 ||||||||||| |||| ||||| ||||||||| Sbjct: 596 tccacgagatcatgactgttggacctcacttc 627
>gb|AY039900.1| Arabidopsis thaliana AT3g13580/K20M4_2 mRNA, complete cds Length = 966 Score = 121 bits (61), Expect = 3e-24 Identities = 163/197 (82%) Strand = Plus / Plus Query: 319 ggtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 378 |||||||||||||| |||||||||| |||||||| | || ||||||||||| |||||| Sbjct: 341 ggtatcaatgccattgacccaaagacaaagaagattttgcaacttttgcgtttaagacag 400 Query: 379 atattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcagggtc 438 || |||||||| |||||| | ||||| |||||||| ||||| |||||||| ||| | || Sbjct: 401 attttcaatggtgtgttcttgaaggtcaacaaggcaaccattaacatgcttcgccgtgtt 460 Query: 439 gagccatatgttgcatatgggtacccgaacctgaagagtgtgagggagttgatctacaag 498 || || ||||| | ||||| ||||||||| | || ||||||| ||| ||||| ||||| Sbjct: 461 gaaccctatgtaacctatggatacccgaacttaaaaagtgtgaaggaattgatttacaaa 520 Query: 499 agaggttatggaaagct 515 |||||| ||||||||| Sbjct: 521 cgaggttttggaaagct 537
>emb|BX822214.1|CNS0A5Y3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB1ZG01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 943 Score = 121 bits (61), Expect = 3e-24 Identities = 163/197 (82%) Strand = Plus / Plus Query: 319 ggtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 378 |||||||||||||| |||||||||| |||||||| | || ||||||||||| |||||| Sbjct: 323 ggtatcaatgccattgacccaaagacaaagaagattttgcaacttttgcgtttaagacag 382 Query: 379 atattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcagggtc 438 || |||||||| |||||| | ||||| |||||||| ||||| |||||||| ||| | || Sbjct: 383 attttcaatggtgtgttcttgaaggtcaacaaggcaaccattaacatgcttcgccgtgtt 442 Query: 439 gagccatatgttgcatatgggtacccgaacctgaagagtgtgagggagttgatctacaag 498 || || ||||| | ||||| ||||||||| | || ||||||| ||| ||||| ||||| Sbjct: 443 gaaccctatgtaacctatggatacccgaacttaaaaagtgtgaaggaattgatttacaaa 502 Query: 499 agaggttatggaaagct 515 |||||| ||||||||| Sbjct: 503 cgaggttttggaaagct 519
>emb|BX824301.1|CNS0A5PN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH38ZB04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1136 Score = 121 bits (61), Expect = 3e-24 Identities = 163/197 (82%) Strand = Plus / Plus Query: 319 ggtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 378 |||||||||||||| |||||||||| |||||||| | || ||||||||||| |||||| Sbjct: 567 ggtatcaatgccattgacccaaagacaaagaagattttgcaacttttgcgtttaagacag 626 Query: 379 atattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcagggtc 438 || |||||||| |||||| | ||||| |||||||| ||||| |||||||| ||| | || Sbjct: 627 attttcaatggtgtgttcttgaaggtcaacaaggcaaccattaacatgcttcgccgtgtt 686 Query: 439 gagccatatgttgcatatgggtacccgaacctgaagagtgtgagggagttgatctacaag 498 || || ||||| | ||||| ||||||||| | || ||||||| ||| ||||| ||||| Sbjct: 687 gaaccctatgtaacctatggatacccgaacttaaaaagtgtgaaggaattgatttacaaa 746 Query: 499 agaggttatggaaagct 515 |||||| ||||||||| Sbjct: 747 cgaggttttggaaagct 763
>gb|AY087583.1| Arabidopsis thaliana clone 36813 mRNA, complete sequence Length = 1221 Score = 121 bits (61), Expect = 3e-24 Identities = 190/233 (81%) Strand = Plus / Plus Query: 283 cctgaggctaagttgctgtttgttgtccgaatcagaggtatcaatgccatgcacccaaag 342 ||||||||||||||||| ||| | | || ||| | |||||||||||||| ||||||| Sbjct: 541 cctgaggctaagttgctctttatcattcgtatccgtggtatcaatgccattgacccaaaa 600 Query: 343 accaagaagatcctccagcttttgcgtttgagacagatattcaatggagtgttcctcaag 402 ||||||||||| || ||||| |||||||||||||||| |||||||| ||||| || ||| Sbjct: 601 accaagaagattctgcagctcctgcgtttgagacagatcttcaatggtgtgtttcttaag 660 Query: 403 gttaacaaggccaccatcaacatgctccgcagggtcgagccatatgttgcatatgggtac 462 || |||||||| || | |||||||| ||| | || || ||||| || | || || ||| Sbjct: 661 gtgaacaaggcaacagtaaacatgctgcgccgagttgaaccatacgtgacttacggatac 720 Query: 463 ccgaacctgaagagtgtgagggagttgatctacaagagaggttatggaaagct 515 || ||| ||||||| || | ||| |||||||||| ||||||||||||||||| Sbjct: 721 ccaaacttgaagagcgttaaggaactgatctacaaaagaggttatggaaagct 773 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 602 tccacgagatcttgacggttggccctcacttc 633 ||||||||||| |||| ||||| ||||||||| Sbjct: 860 tccacgagatcatgactgttggacctcacttc 891
>gb|BT002379.1| Arabidopsis thaliana Unknown protein mRNA, complete cds Length = 955 Score = 121 bits (61), Expect = 3e-24 Identities = 190/233 (81%) Strand = Plus / Plus Query: 283 cctgaggctaagttgctgtttgttgtccgaatcagaggtatcaatgccatgcacccaaag 342 ||||||||||||||||| ||| | | || ||| | |||||||||||||| ||||||| Sbjct: 310 cctgaggctaagttgctctttatcattcgtatccgtggtatcaatgccattgacccaaaa 369 Query: 343 accaagaagatcctccagcttttgcgtttgagacagatattcaatggagtgttcctcaag 402 ||||||||||| || ||||| |||||||||||||||| |||||||| ||||| || ||| Sbjct: 370 accaagaagattctgcagctcctgcgtttgagacagatcttcaatggtgtgtttcttaag 429 Query: 403 gttaacaaggccaccatcaacatgctccgcagggtcgagccatatgttgcatatgggtac 462 || |||||||| || | |||||||| ||| | || || ||||| || | || || ||| Sbjct: 430 gtgaacaaggcaacagtaaacatgctgcgccgagttgaaccatacgtgacttacggatac 489 Query: 463 ccgaacctgaagagtgtgagggagttgatctacaagagaggttatggaaagct 515 || ||| ||||||| || | ||| |||||||||| ||||||||||||||||| Sbjct: 490 ccaaacttgaagagcgttaaggaactgatctacaaaagaggttatggaaagct 542 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 602 tccacgagatcttgacggttggccctcacttc 633 ||||||||||| |||| ||||| ||||||||| Sbjct: 629 tccacgagatcatgactgttggacctcacttc 660
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 117 bits (59), Expect = 5e-23 Identities = 80/87 (91%) Strand = Plus / Plus Query: 375 acagatattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcag 434 |||||| |||||||| || |||||||||||||||||||| ||||| |||||||| ||||| Sbjct: 8148188 acagatcttcaatggtgtcttcctcaaggttaacaaggcaaccattaacatgctgcgcag 8148247 Query: 435 ggtcgagccatatgttgcatatgggta 461 ||| ||||||||||||||||||||||| Sbjct: 8148248 ggttgagccatatgttgcatatgggta 8148274 Score = 113 bits (57), Expect = 7e-22 Identities = 93/105 (88%) Strand = Plus / Plus Query: 458 ggtacccgaacctgaagagtgtgagggagttgatctacaagagaggttatggaaagctca 517 ||||||| |||||||||||||| ||||| |||||||||||||| ||||| |||||||||| Sbjct: 8148769 ggtacccaaacctgaagagtgtcagggaattgatctacaagaggggttacggaaagctca 8148828 Query: 518 acaagcaaaggattcctctgaccaacaacaaggtcatcgaggagg 562 ||||||| ||||||||||| |||||||| ||||| ||||||| Sbjct: 8148829 acaagcagaggattcctcttcagaacaacaaagtcattgaggagg 8148873 Score = 91.7 bits (46), Expect = 3e-15 Identities = 124/150 (82%) Strand = Plus / Plus Query: 66 ggtggtgccggagtcggtgctcctcaagaggaagcgggaggagctctgggccgccgagaa 125 ||||||||||||||||||||| ||| ||||||||||||||| ||||| || || | Sbjct: 8147203 ggtggtgccggagtcggtgctgaagaagcggaagcgggaggagcagtgggcggcggacag 8147262 Query: 126 gaagaccaaggccgtcgaggagaagaagaagtcgacggagaaccgcaaggtcatcttcgc 185 |||| ||||| ||| |||||||||||| | |||| ||||||| |||||||||| Sbjct: 8147263 gaaggagaaggcgctcgccgagaagaagaaggccgtcgagagccgcaagctcatcttcgc 8147322 Query: 186 ccgcgccaagcagtacgccgaggagtacga 215 ||||||||||||||||||| |||||||||| Sbjct: 8147323 ccgcgccaagcagtacgcccaggagtacga 8147352 Score = 79.8 bits (40), Expect = 1e-11 Identities = 79/92 (85%) Strand = Plus / Plus Query: 220 caggacaaggagttggttcagcttaagcgtgaggcccggatgaagggtgggttctatgtc 279 ||||| |||||| | || ||||| ||||||||||| |||||||||||||||||||| ||| Sbjct: 8147868 caggagaaggagcttgtgcagctcaagcgtgaggctcggatgaagggtgggttctacgtc 8147927 Query: 280 agtcctgaggctaagttgctgtttgttgtccg 311 || |||||||| || | |||||||| ||||| Sbjct: 8147928 agccctgaggccaaacttctgtttgtggtccg 8147959 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 320 gtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgag 374 ||||||||||||||||||| ||||||| ||||||| | |||||| |||| ||||| Sbjct: 8148044 gtatcaatgccatgcaccccaagaccaggaagatcttgcagcttctgcggttgag 8148098 Score = 48.1 bits (24), Expect = 0.035 Identities = 36/40 (90%) Strand = Plus / Plus Query: 578 acatcatctgcattgaagacgttgtccacgagatcttgac 617 |||||||||||||||| || |||||||||||||| |||| Sbjct: 8148982 acatcatctgcattgaggatcttgtccacgagatcatgac 8149021 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 tctctctcgcctcctcctccc 21 ||||||||||||||||||||| Sbjct: 19449207 tctctctcgcctcctcctccc 19449227
>dbj|AP005603.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1047A05 Length = 157517 Score = 117 bits (59), Expect = 5e-23 Identities = 80/87 (91%) Strand = Plus / Plus Query: 375 acagatattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcag 434 |||||| |||||||| || |||||||||||||||||||| ||||| |||||||| ||||| Sbjct: 116499 acagatcttcaatggtgtcttcctcaaggttaacaaggcaaccattaacatgctgcgcag 116558 Query: 435 ggtcgagccatatgttgcatatgggta 461 ||| ||||||||||||||||||||||| Sbjct: 116559 ggttgagccatatgttgcatatgggta 116585 Score = 113 bits (57), Expect = 7e-22 Identities = 93/105 (88%) Strand = Plus / Plus Query: 458 ggtacccgaacctgaagagtgtgagggagttgatctacaagagaggttatggaaagctca 517 ||||||| |||||||||||||| ||||| |||||||||||||| ||||| |||||||||| Sbjct: 117080 ggtacccaaacctgaagagtgtcagggaattgatctacaagaggggttacggaaagctca 117139 Query: 518 acaagcaaaggattcctctgaccaacaacaaggtcatcgaggagg 562 ||||||| ||||||||||| |||||||| ||||| ||||||| Sbjct: 117140 acaagcagaggattcctcttcagaacaacaaagtcattgaggagg 117184 Score = 91.7 bits (46), Expect = 3e-15 Identities = 124/150 (82%) Strand = Plus / Plus Query: 66 ggtggtgccggagtcggtgctcctcaagaggaagcgggaggagctctgggccgccgagaa 125 ||||||||||||||||||||| ||| ||||||||||||||| ||||| || || | Sbjct: 115514 ggtggtgccggagtcggtgctgaagaagcggaagcgggaggagcagtgggcggcggacag 115573 Query: 126 gaagaccaaggccgtcgaggagaagaagaagtcgacggagaaccgcaaggtcatcttcgc 185 |||| ||||| ||| |||||||||||| | |||| ||||||| |||||||||| Sbjct: 115574 gaaggagaaggcgctcgccgagaagaagaaggccgtcgagagccgcaagctcatcttcgc 115633 Query: 186 ccgcgccaagcagtacgccgaggagtacga 215 ||||||||||||||||||| |||||||||| Sbjct: 115634 ccgcgccaagcagtacgcccaggagtacga 115663 Score = 79.8 bits (40), Expect = 1e-11 Identities = 79/92 (85%) Strand = Plus / Plus Query: 220 caggacaaggagttggttcagcttaagcgtgaggcccggatgaagggtgggttctatgtc 279 ||||| |||||| | || ||||| ||||||||||| |||||||||||||||||||| ||| Sbjct: 116179 caggagaaggagcttgtgcagctcaagcgtgaggctcggatgaagggtgggttctacgtc 116238 Query: 280 agtcctgaggctaagttgctgtttgttgtccg 311 || |||||||| || | |||||||| ||||| Sbjct: 116239 agccctgaggccaaacttctgtttgtggtccg 116270 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 320 gtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgag 374 ||||||||||||||||||| ||||||| ||||||| | |||||| |||| ||||| Sbjct: 116355 gtatcaatgccatgcaccccaagaccaggaagatcttgcagcttctgcggttgag 116409 Score = 48.1 bits (24), Expect = 0.035 Identities = 36/40 (90%) Strand = Plus / Plus Query: 578 acatcatctgcattgaagacgttgtccacgagatcttgac 617 |||||||||||||||| || |||||||||||||| |||| Sbjct: 117293 acatcatctgcattgaggatcttgtccacgagatcatgac 117332
>emb|BX818796.1|CNS0A9X8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB14ZB01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 889 Score = 113 bits (57), Expect = 7e-22 Identities = 162/197 (82%) Strand = Plus / Plus Query: 319 ggtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 378 |||||||||||||| |||| ||||| |||||||| |||||||| ||||||||||||||| Sbjct: 306 ggtatcaatgccattgaccctaagactaagaagattctccagctcttgcgtttgagacag 365 Query: 379 atattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcagggtc 438 || |||||||| || ||||| || || |||||||| || || |||||||| ||| | || Sbjct: 366 attttcaatggtgttttccttaaagtcaacaaggctacgatgaacatgcttcgccgtgtt 425 Query: 439 gagccatatgttgcatatgggtacccgaacctgaagagtgtgagggagttgatctacaag 498 ||||| ||||| | || || | ||| ||| | |||||| | | ||| |||||||||||| Sbjct: 426 gagccctatgtcacttacggattccctaacttaaagagtatcaaggaattgatctacaag 485 Query: 499 agaggttatggaaagct 515 |||||||| | |||||| Sbjct: 486 agaggttacgtaaagct 502
>emb|BX824872.1|CNS0A5RP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH79ZF10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1504 Score = 97.6 bits (49), Expect = 4e-17 Identities = 161/197 (81%), Gaps = 1/197 (0%) Strand = Plus / Plus Query: 319 ggtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 378 ||||| |||||||| |||||||||| |||||||| | || ||||||||||| |||||| Sbjct: 916 ggtataaatgccattgacccaaagacaaagaagattttgcaacttttgcgtttaagacag 975 Query: 379 atattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcagggtc 438 || |||||||| |||||| | ||||| |||||||| ||||| |||||| | ||| | || Sbjct: 976 attttcaatggtgtgttcttgaaggtcaacaaggcaaccattaacatg-ttcgccgtgtt 1034 Query: 439 gagccatatgttgcatatgggtacccgaacctgaagagtgtgagggagttgatctacaag 498 || || ||||| | ||||| ||||||||| | || ||||||| ||| ||||| ||||| Sbjct: 1035 gaaccctatgtaacctatggatacccgaacttaaaaagtgtgaaggaattgatttacaaa 1094 Query: 499 agaggttatggaaagct 515 |||||| ||||||||| Sbjct: 1095 cgaggttttggaaagct 1111
>emb|BX825759.1|CNS0A4ZI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL60ZF08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 895 Score = 93.7 bits (47), Expect = 7e-16 Identities = 96/111 (86%), Gaps = 1/111 (0%) Strand = Plus / Plus Query: 319 ggtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 378 |||||||||||||| |||||||||| |||||||| | || |||||||||||||||||| Sbjct: 311 ggtatcaatgccattgacccaaagacaaagaagattttgcaacttttgcgtttgagacag 370 Query: 379 atattc-aatggagtgttcctcaaggttaacaaggccaccatcaacatgct 428 || ||| ||||| |||||| | ||||| |||||||| ||||| |||||||| Sbjct: 371 attttcaaatggtgtgttcttgaaggtcaacaaggcaaccattaacatgct 421
>gb|AC006200.3| Arabidopsis thaliana chromosome 2 clone F10A8 map rga, complete sequence Length = 94029 Score = 69.9 bits (35), Expect = 1e-08 Identities = 53/59 (89%) Strand = Plus / Minus Query: 320 gtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 378 ||||||||||||| |||| ||||| |||||||| |||||||| ||||||||||||||| Sbjct: 43427 gtatcaatgccattgaccctaagactaagaagattctccagctcttgcgtttgagacag 43369 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 470 tgaagagtgtgagggagttgatctacaagagaggttatggaaagct 515 |||||||||| | ||| |||||||||||||||||||| |||||||| Sbjct: 42945 tgaagagtgtcaaggaattgatctacaagagaggttacggaaagct 42900
>gb|DQ228335.1| Solanum tuberosum clone 145F05 thaliana 60S ribosomal protein L7 (At2g44120) mRNA, complete cds Length = 915 Score = 65.9 bits (33), Expect = 2e-07 Identities = 138/173 (79%) Strand = Plus / Plus Query: 341 agaccaagaagatcctccagcttttgcgtttgagacagatattcaatggagtgttcctca 400 ||||||| ||||| || |||||| | | ||| ||||||| ||||| || || ||| | | Sbjct: 339 agaccaaaaagattctgcagcttctcagattgcgacagatcttcaacggcgtcttcttga 398 Query: 401 aggttaacaaggccaccatcaacatgctccgcagggtcgagccatatgttgcatatgggt 460 | ||||||||||||||| | |||||||| | ||||| |||||||||||| |||| || | Sbjct: 399 aagttaacaaggccaccgtgaacatgctgcatagggttgagccatatgttacatacggct 458 Query: 461 acccgaacctgaagagtgtgagggagttgatctacaagagaggttatggaaag 513 | || ||| |||||||| | | || |||||||||| |||||||||||||| Sbjct: 459 atcccaacttgaagagtattaaagaactgatctacaaacgaggttatggaaag 511
>gb|DQ108546.1| Corchorus olitorius SSR marker J148-M13F genomic sequence Length = 861 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 469 ctgaagagtgtgagggagttgatctacaagagaggttatggaaagctcaacaagca 524 |||||||||||||| ||| |||||||||||||||| ||||| ||| | |||||||| Sbjct: 463 ctgaagagtgtgagagagctgatctacaagagaggatatgggaagttaaacaagca 408
>gb|AC004005.3| Arabidopsis thaliana chromosome 2 clone F6E13 map CIC10F02, CIC02E07, complete sequence Length = 109741 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 320 gtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 378 ||||||||||||| ||||||| ||||||||||| || ||||| |||||||||||||| Sbjct: 80212 gtatcaatgccattgacccaaaaaccaagaagattctgcagctcctgcgtttgagacag 80154 Score = 48.1 bits (24), Expect = 0.035 Identities = 27/28 (96%) Strand = Plus / Minus Query: 488 tgatctacaagagaggttatggaaagct 515 |||||||||| ||||||||||||||||| Sbjct: 79783 tgatctacaaaagaggttatggaaagct 79756 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 602 tccacgagatcttgacggttggccctcacttc 633 ||||||||||| |||| ||||| ||||||||| Sbjct: 79669 tccacgagatcatgactgttggacctcacttc 79638
>gb|AY105378.1| Zea mays PCO101520 mRNA sequence Length = 500 Score = 60.0 bits (30), Expect = 9e-06 Identities = 57/65 (87%), Gaps = 1/65 (1%) Strand = Plus / Plus Query: 44 atgtcgtccgnggcggcgaagtggt-ggtgccggagtcggtgctcctcaagaggaagcgg 102 |||||||||| |||| ||||| || |||||||||||||||||||| |||| ||||||| Sbjct: 65 atgtcgtccgaggcgtcgaaggtgtcggtgccggagtcggtgctccgcaagcggaagcgt 124 Query: 103 gagga 107 ||||| Sbjct: 125 gagga 129
>ref|XM_453218.1| Kluyveromyces lactis NRRL Y-1140, KLLA0D03410g predicted mRNA Length = 768 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 491 tctacaagagaggttatggaaagctcaacaagcaaaggattcct 534 |||||||||||||||| || ||| ||||||||||||| |||||| Sbjct: 476 tctacaagagaggttacggtaagatcaacaagcaaagaattcct 519
>gb|AY232023.1| Drosophila yakuba clone yak-ad_RpL7 mRNA sequence Length = 560 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 358 cagcttttgcgtttgagacagatattcaatggagtgttcctcaaggttaacaaggccacc 417 |||||||| ||| |||| ||||| ||| || |||||| ||||| | |||||||||||| Sbjct: 337 cagcttttccgtctgaggcagatcaacaacggtgtgttcatcaagctgaacaaggccacc 396 Query: 418 atcaacatgctccgca 433 ||||||||||| |||| Sbjct: 397 atcaacatgcttcgca 412
>emb|CR382124.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1715506 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 491 tctacaagagaggttatggaaagctcaacaagcaaaggattcct 534 |||||||||||||||| || ||| ||||||||||||| |||||| Sbjct: 286053 tctacaagagaggttacggtaagatcaacaagcaaagaattcct 286096
>ref|NM_078807.1| Drosophila melanogaster Ribosomal protein L7 CG4897-RA (RpL7), mRNA Length = 982 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 391 gtgttcctcaaggttaacaaggccaccatcaacatgctccgca 433 |||||| ||||| | ||||||||||||||||||||||| |||| Sbjct: 418 gtgttcatcaagctgaacaaggccaccatcaacatgctgcgca 460
>gb|AY089648.1| Drosophila melanogaster RH04903 full insert cDNA Length = 909 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 391 gtgttcctcaaggttaacaaggccaccatcaacatgctccgca 433 |||||| ||||| | ||||||||||||||||||||||| |||| Sbjct: 417 gtgttcatcaagctgaacaaggccaccatcaacatgctgcgca 459
>gb|AC092233.1|AC092233 Drosophila melanogaster, chromosome 2L, region 30F-31B, BAC clone BACR29P12, complete sequence Length = 161446 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 391 gtgttcctcaaggttaacaaggccaccatcaacatgctccgca 433 |||||| ||||| | ||||||||||||||||||||||| |||| Sbjct: 20419 gtgttcatcaagctgaacaaggccaccatcaacatgctgcgca 20377
>gb|AC009849.7|AC009849 Drosophila melanogaster, chromosome 2L, region 31B-31C, BAC clone BACR07H08, complete sequence Length = 153505 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 391 gtgttcctcaaggttaacaaggccaccatcaacatgctccgca 433 |||||| ||||| | ||||||||||||||||||||||| |||| Sbjct: 29566 gtgttcatcaagctgaacaaggccaccatcaacatgctgcgca 29608
>dbj|AP002038.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone: K20M4 Length = 25790 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 320 gtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 378 ||||||||||||| |||||||||| |||||||| | || ||||||||||| |||||| Sbjct: 4913 gtatcaatgccattgacccaaagacaaagaagattttgcaacttttgcgtttaagacag 4971
>gb|AE003627.4| Drosophila melanogaster chromosome 2L, section 36 of 83 of the complete sequence Length = 264225 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 391 gtgttcctcaaggttaacaaggccaccatcaacatgctccgca 433 |||||| ||||| | ||||||||||||||||||||||| |||| Sbjct: 227949 gtgttcatcaagctgaacaaggccaccatcaacatgctgcgca 227991
>emb|X15109.1|DMRPHOM D.melanogaster mRNA fragment for ribosomal protein homologous to rat ribosomal protein L7 Length = 810 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 391 gtgttcctcaaggttaacaaggccaccatcaacatgctccgca 433 |||||| ||||| | ||||||||||||||||||||||| |||| Sbjct: 332 gtgttcatcaagctgaacaaggccaccatcaacatgctgcgca 374
>gb|DQ216877.1| Taeniopygia guttata clone 0061P0010G03 ribosomal protein L7-like mRNA, complete sequence Length = 765 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 488 tgatctacaagagaggttatggaaagctcaacaagca 524 ||||||||||| |||||||||| ||| |||||||||| Sbjct: 394 tgatctacaagcgaggttatggcaagatcaacaagca 430
>gb|DQ216876.1| Taeniopygia guttata clone 0061P0026G05 ribosomal protein L7-like mRNA, complete sequence Length = 764 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 488 tgatctacaagagaggttatggaaagctcaacaagca 524 ||||||||||| |||||||||| ||| |||||||||| Sbjct: 393 tgatctacaagcgaggttatggcaagatcaacaagca 429
>gb|AC148819.3| Medicago truncatula chromosome 2 BAC clone mte1-11g7, complete sequence Length = 105682 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Plus Query: 469 ctgaagagtgtgagggagttgatctacaagagaggttatggaaag 513 ||||||||||| || || |||||||||||| | |||||||||||| Sbjct: 3017 ctgaagagtgtcagagaattgatctacaagcgcggttatggaaag 3061 Score = 46.1 bits (23), Expect = 0.14 Identities = 50/59 (84%) Strand = Plus / Plus Query: 320 gtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 378 |||||||||| ||| ||||||| | | |||||| | ||||||||||||||||||||| Sbjct: 1888 gtatcaatgcaatggacccaaaatcaaggaagattttgcagcttttgcgtttgagacag 1946
>ref|XM_765641.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_609_14063_14764) partial mRNA Length = 702 Score = 48.1 bits (24), Expect = 0.035 Identities = 39/44 (88%) Strand = Plus / Minus Query: 571 aagcacaacatcatctgcattgaagacgttgtccacgagatctt 614 |||||||||||| ||||| |||||| |||||||||||||||| Sbjct: 252 aagcacaacatcctctgcgcagaagaccttgtccacgagatctt 209
>ref|XM_765642.1| Giardia lamblia ATCC 50803 ribosomal protein L7 (GLP_609_14821_14114) partial mRNA Length = 708 Score = 48.1 bits (24), Expect = 0.035 Identities = 39/44 (88%) Strand = Plus / Plus Query: 571 aagcacaacatcatctgcattgaagacgttgtccacgagatctt 614 |||||||||||| ||||| |||||| |||||||||||||||| Sbjct: 508 aagcacaacatcctctgcgcagaagaccttgtccacgagatctt 551
>emb|AJ557884.1|CGI557884 Crassostrea gigas partial mRNA for ribosomal protein L7 (rpl7 gene) Length = 782 Score = 48.1 bits (24), Expect = 0.035 Identities = 48/56 (85%) Strand = Plus / Plus Query: 457 gggtacccgaacctgaagagtgtgagggagttgatctacaagagaggttatggaaa 512 |||||||| ||||| |||||||||||||| ||| | ||||| || || |||||||| Sbjct: 400 gggtaccccaacctcaagagtgtgagggaattggtgtacaaaaggggatatggaaa 455
>gb|DQ084481.1| Chaetomium globosum 60S ribosomal protein L7 mRNA, complete cds Length = 812 Score = 48.1 bits (24), Expect = 0.035 Identities = 39/44 (88%) Strand = Plus / Plus Query: 583 atctgcattgaagacgttgtccacgagatcttgacggttggccc 626 ||||||||||| ||| | ||||||||||||||||| || ||||| Sbjct: 609 atctgcattgaggacctggtccacgagatcttgactgtcggccc 652
>gb|AY386265.1| Bovine papular stomatitis virus strain BV-AR02, complete genome Length = 134431 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 114 ggccgccgagaagaagaccaaggccgt 140 |||||||||||||||| |||||||||| Sbjct: 63289 ggccgccgagaagaagcccaaggccgt 63315
>gb|AY072288.1| Spodoptera frugiperda ribosomal protein L7 mRNA, complete cds Length = 876 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Plus Query: 460 tacccgaacctgaagagtgtgagggagttgatctacaag 498 ||||| |||||||||||||| ||||||||| | |||||| Sbjct: 508 taccccaacctgaagagtgttagggagttggtatacaag 546
>gb|BC085590.1| Danio rerio cDNA clone IMAGE:7264251, partial cds Length = 877 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 406 aacaaggccaccatcaacatgctccg 431 ||||||||| |||||||||||||||| Sbjct: 389 aacaaggcctccatcaacatgctccg 414
>gb|AY561515.1| Danio rerio ribosomal protein L7 (rpl7) mRNA, complete cds Length = 829 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 406 aacaaggccaccatcaacatgctccg 431 ||||||||| |||||||||||||||| Sbjct: 391 aacaaggcctccatcaacatgctccg 416
>ref|NM_213644.1| Danio rerio ribosomal protein L7 (rpl7), mRNA Length = 829 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 406 aacaaggccaccatcaacatgctccg 431 ||||||||| |||||||||||||||| Sbjct: 391 aacaaggcctccatcaacatgctccg 416
>ref|XM_549203.2| PREDICTED: Canis familiaris similar to 60S ribosomal protein L7 (LOC492082), mRNA Length = 564 Score = 44.1 bits (22), Expect = 0.55 Identities = 55/66 (83%) Strand = Plus / Plus Query: 457 gggtacccgaacctgaagagtgtgagggagttgatctacaagagaggttatggaaagctc 516 |||||||| ||||||||| |||| || |||||||||||| | |||||||| ||| || Sbjct: 244 gggtacccaaacctgaagtcagtgaatgaattgatctacaagcgtggttatggcaagatc 303 Query: 517 aacaag 522 |||||| Sbjct: 304 aacaag 309
>ref|XM_854868.1| PREDICTED: Canis familiaris similar to 60S ribosomal protein L7, transcript variant 2 (LOC477912), mRNA Length = 1120 Score = 44.1 bits (22), Expect = 0.55 Identities = 55/66 (83%) Strand = Plus / Plus Query: 457 gggtacccgaacctgaagagtgtgagggagttgatctacaagagaggttatggaaagctc 516 |||||||| ||||||||| |||| || |||||||||||| | |||||||| ||| || Sbjct: 417 gggtacccaaacctgaagtcagtgaatgaattgatctacaagcgtggttatggcaagatc 476 Query: 517 aacaag 522 |||||| Sbjct: 477 aacaag 482
>ref|XM_535102.2| PREDICTED: Canis familiaris similar to 60S ribosomal protein L7, transcript variant 1 (LOC477912), mRNA Length = 1178 Score = 44.1 bits (22), Expect = 0.55 Identities = 55/66 (83%) Strand = Plus / Plus Query: 457 gggtacccgaacctgaagagtgtgagggagttgatctacaagagaggttatggaaagctc 516 |||||||| ||||||||| |||| || |||||||||||| | |||||||| ||| || Sbjct: 475 gggtacccaaacctgaagtcagtgaatgaattgatctacaagcgtggttatggcaagatc 534 Query: 517 aacaag 522 |||||| Sbjct: 535 aacaag 540
>ref|XM_537929.2| PREDICTED: Canis familiaris similar to 60S ribosomal protein L7 (LOC480813), mRNA Length = 840 Score = 44.1 bits (22), Expect = 0.55 Identities = 55/66 (83%) Strand = Plus / Plus Query: 457 gggtacccgaacctgaagagtgtgagggagttgatctacaagagaggttatggaaagctc 516 |||||||| ||||||||| |||| || |||||||||||| | |||||||| ||| || Sbjct: 439 gggtacccaaacctgaagtcagtgaatgaattgatctacaagcgtggttatggcaagatc 498 Query: 517 aacaag 522 |||||| Sbjct: 499 aacaag 504
>emb|AL445186.4| Human DNA sequence from clone RP11-336P12 on chromosome 9 Contains the 3' end of the PBX3 gene for pre-B-cell leukemia transcription factor 3, complete sequence Length = 156124 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 91 aagaggaagcgggaggagctctgggc 116 ||||||||||||||| |||||||||| Sbjct: 98427 aagaggaagcgggagaagctctgggc 98402
>gb|BC107515.1| Danio rerio ribosomal protein L7, mRNA (cDNA clone MGC:123071 IMAGE:7399953), complete cds Length = 920 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 406 aacaaggccaccatcaacatgctccg 431 ||||||||| |||||||||||||||| Sbjct: 401 aacaaggcctccatcaacatgctccg 426
>ref|XM_482324.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1659 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 tctctctcgcctcctcctccc 21 ||||||||||||||||||||| Sbjct: 12 tctctctcgcctcctcctccc 32
>ref|XM_529118.1| PREDICTED: Pan troglodytes similar to bA161I19.3 (similar to ribosomal protein L36) (LOC473745), mRNA Length = 318 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 caagaggaagcgggaggagct 110 ||||||||||||||||||||| Sbjct: 249 caagaggaagcgggaggagct 269
>ref|XM_512301.1| PREDICTED: Pan troglodytes similar to ribosomal protein L36; 60S ribosomal protein L36 (LOC455622), mRNA Length = 582 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 caagaggaagcgggaggagct 110 ||||||||||||||||||||| Sbjct: 265 caagaggaagcgggaggagct 285
>ref|XM_510736.1| PREDICTED: Pan troglodytes mitogen-activated protein kinase 8 interacting protein 3 (LOC453825), mRNA Length = 8169 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 137 ccgtcgaggagaagaagaagtcgac 161 ||||| ||||||||||||||||||| Sbjct: 5612 ccgtccaggagaagaagaagtcgac 5636
>ref|XM_522897.1| PREDICTED: Pan troglodytes similar to ribosomal protein L36; 60S ribosomal protein L36 (LOC467500), mRNA Length = 318 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 caagaggaagcgggaggagct 110 ||||||||||||||||||||| Sbjct: 249 caagaggaagcgggaggagct 269
>gb|DQ216875.1| Taeniopygia guttata clone 0058P0003F03 ribosomal protein L7-like mRNA, complete sequence Length = 842 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 488 tgatctacaagagaggttatggaaagctcaacaagca 524 ||||||||||| ||||||| || ||| |||||||||| Sbjct: 478 tgatctacaagcgaggttacggcaagatcaacaagca 514
>gb|DQ216874.1| Taeniopygia guttata clone 0065P0005A03 ribosomal protein L7-like mRNA, complete sequence Length = 844 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 488 tgatctacaagagaggttatggaaagctcaacaagca 524 ||||||||||| ||||||| || ||| |||||||||| Sbjct: 477 tgatctacaagcgaggttacggcaagatcaacaagca 513
>gb|AY617897.1| Sterkiella histriomuscorum clone UGC1O0006_E04_F genomic sequence Length = 674 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Minus Query: 406 aacaaggccaccatcaacatgctccgcagggtcgagccata 446 |||||||| ||||||||||||||| | || || |||||||| Sbjct: 539 aacaaggcaaccatcaacatgctcagaagagttgagccata 499
>gb|AY693324.1| Saccharomyces cerevisiae clone FLH114729.01X YPL197C gene, complete cds Length = 414 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 491 tctacaagagaggttatggaaagctcaacaagcaaag 527 ||||||||||||||| || ||| ||||||||||||| Sbjct: 347 tctacaagagaggtttcggtaagatcaacaagcaaag 311
>gb|AY389939.1| Latimeria chalumnae ribosomal protein L7 mRNA, partial cds Length = 664 Score = 42.1 bits (21), Expect = 2.2 Identities = 66/81 (81%) Strand = Plus / Plus Query: 418 atcaacatgctccgcagggtcgagccatatgttgcatatgggtacccgaacctgaagagt 477 |||||||||||||| | | ||| |||||| |||||| |||||||| || |||||| | Sbjct: 341 atcaacatgctccgaattgccgaaccatatattgcatgggggtacccaaatctgaagtct 400 Query: 478 gtgagggagttgatctacaag 498 || | ||||||||||||||| Sbjct: 401 gtacgtgagttgatctacaag 421
>ref|NM_001040439.1| Homo sapiens mitogen-activated protein kinase 8 interacting protein 3 (MAPK8IP3), transcript variant 2, mRNA Length = 5635 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 137 ccgtcgaggagaagaagaagtcgac 161 ||||| ||||||||||||||||||| Sbjct: 1790 ccgtccaggagaagaagaagtcgac 1814
>ref|NM_015133.3| Homo sapiens mitogen-activated protein kinase 8 interacting protein 3 (MAPK8IP3), transcript variant 1, mRNA Length = 5653 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 137 ccgtcgaggagaagaagaagtcgac 161 ||||| ||||||||||||||||||| Sbjct: 1808 ccgtccaggagaagaagaagtcgac 1832
>gb|BC004971.1| Homo sapiens ribosomal protein L36, transcript variant 1, mRNA (cDNA clone MGC:3585 IMAGE:2957859), complete cds Length = 408 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 caagaggaagcgggaggagct 110 ||||||||||||||||||||| Sbjct: 273 caagaggaagcgggaggagct 293
>gb|BC003052.1| Homo sapiens ribosomal protein L36, transcript variant 2, mRNA (cDNA clone MGC:781 IMAGE:3546966), complete cds Length = 578 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 caagaggaagcgggaggagct 110 ||||||||||||||||||||| Sbjct: 401 caagaggaagcgggaggagct 421
>ref|NM_033643.2| Homo sapiens ribosomal protein L36 (RPL36), transcript variant 1, mRNA Length = 453 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 caagaggaagcgggaggagct 110 ||||||||||||||||||||| Sbjct: 318 caagaggaagcgggaggagct 338
>ref|NM_015414.3| Homo sapiens ribosomal protein L36 (RPL36), transcript variant 2, mRNA Length = 557 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 caagaggaagcgggaggagct 110 ||||||||||||||||||||| Sbjct: 422 caagaggaagcgggaggagct 442
>ref|XM_596585.2| PREDICTED: Bos taurus similar to aldehyde oxidase structural homolog 2 (LOC518393), mRNA Length = 5298 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 acccaaagaccaagaagatcc 355 ||||||||||||||||||||| Sbjct: 311 acccaaagaccaagaagatcc 331
>gb|AY207497.1| Chlamydomonas reinhardtii CR057 protein gene, complete cds Length = 4765 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 137 ccgtcgaggagaagaagaagt 157 ||||||||||||||||||||| Sbjct: 3157 ccgtcgaggagaagaagaagt 3177
>ref|XM_446758.1| Candida glabrata CBS138, CAGL0G09130g partial mRNA Length = 735 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 491 tctacaagagaggttatggaaagctcaacaagcaaag 527 |||||||||||||| | || ||| ||||||||||||| Sbjct: 443 tctacaagagaggtcacggtaagatcaacaagcaaag 479
>gb|BC001476.1| Homo sapiens cDNA clone IMAGE:3138803, **** WARNING: chimeric clone **** Length = 1306 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 caagaggaagcgggaggagct 110 ||||||||||||||||||||| Sbjct: 1143 caagaggaagcgggaggagct 1163
>emb|AL590609.15| Human DNA sequence from clone RP11-4M23 on chromosome 1 Contains the 5' end of the FUCA1 gene for alpha-L- 1 fucosidase (tissue), the CNR2 gene for cannabinoid receptor 2 (macrophage), a BTB (POZ) domain-containing 6 (BTBD6) pseudogene, a novel gene, an H3 histone family 3A (H3F3A) pseudogene, the PNRC2 gene for proline-rich nuclear receptor coactivator 2, the FUS1P1 gene for FUS interacting protein (serine-arginine rich) 1, a ribosomal protein L36 (RPL36) pseudogene and seven CpG islands, complete sequence Length = 172307 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 90 caagaggaagcgggaggagct 110 ||||||||||||||||||||| Sbjct: 140972 caagaggaagcgggaggagct 140952
>emb|AL589786.8| Human DNA sequence from clone RP11-161I19 on chromosome X Contains a RNA binding motif protein X chromosome (RBMX) pseudogene, a ribosomal protein L36 pseudogene, the 5' end of a novel gene (KIAA1495), a novel gene (FLJ40249) and two CpG islands, complete sequence Length = 106099 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 caagaggaagcgggaggagct 110 ||||||||||||||||||||| Sbjct: 48855 caagaggaagcgggaggagct 48875
>emb|AL031717.11|HS361A3 Human DNA sequence from clone LA16c-361A3 on chromosome 16 Contains part of gene simliar to murine JNK/SAPK-associated protein-1, STSs, GSSs and CpG islands, complete sequence Length = 43288 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 137 ccgtcgaggagaagaagaagtcgac 161 ||||| ||||||||||||||||||| Sbjct: 40192 ccgtccaggagaagaagaagtcgac 40216
>emb|CR380953.1| Candida glabrata strain CBS138 chromosome G complete sequence Length = 992211 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 491 tctacaagagaggttatggaaagctcaacaagcaaag 527 |||||||||||||| | || ||| ||||||||||||| Sbjct: 872856 tctacaagagaggtcacggtaagatcaacaagcaaag 872892
>emb|AL050273.1|HSM800130 Homo sapiens mRNA; cDNA DKFZp566B023 (from clone DKFZp566B023) Length = 414 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 caagaggaagcgggaggagct 110 ||||||||||||||||||||| Sbjct: 284 caagaggaagcgggaggagct 304
>emb|CR858862.1| Pongo pygmaeus mRNA; cDNA DKFZp469C084 (from clone DKFZp469C084) Length = 546 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 caagaggaagcgggaggagct 110 ||||||||||||||||||||| Sbjct: 300 caagaggaagcgggaggagct 320
>gb|AE006639.1| Homo sapiens 16p13.3 sequence section 7 of 8 Length = 270150 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 137 ccgtcgaggagaagaagaagtcgac 161 ||||| ||||||||||||||||||| Sbjct: 154082 ccgtccaggagaagaagaagtcgac 154106
>gb|DQ122884.1| Chlamydomonas incerta mitochondrial carrier protein CR057 mRNA, complete cds; nuclear gene for mitochondrial product Length = 1745 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 137 ccgtcgaggagaagaagaagt 157 ||||||||||||||||||||| Sbjct: 1136 ccgtcgaggagaagaagaagt 1156
>gb|AC011499.5| Homo sapiens chromosome 19 clone CTB-54O9, complete sequence Length = 199776 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 caagaggaagcgggaggagct 110 ||||||||||||||||||||| Sbjct: 64929 caagaggaagcgggaggagct 64949
>emb|CR616362.1| full-length cDNA clone CS0DI037YN14 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 422 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 caagaggaagcgggaggagct 110 ||||||||||||||||||||| Sbjct: 307 caagaggaagcgggaggagct 327
>emb|CR613397.1| full-length cDNA clone CS0DI014YA14 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 370 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 caagaggaagcgggaggagct 110 ||||||||||||||||||||| Sbjct: 255 caagaggaagcgggaggagct 275
>gb|AC087726.36| Chlamydomonas reinhardtii clone cr-40a20, complete sequence Length = 168794 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 137 ccgtcgaggagaagaagaagt 157 ||||||||||||||||||||| Sbjct: 64268 ccgtcgaggagaagaagaagt 64248
>gb|AC117383.4| Homo sapiens 3 BAC RP11-789L4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 194991 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 387 tggagtgttcctcaaggttaa 407 ||||||||||||||||||||| Sbjct: 59461 tggagtgttcctcaaggttaa 59441
>gb|AE012262.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 170 of 460 of the complete genome Length = 10804 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 128 agaccaaggccgtcgaggagaagaagaag 156 ||||||||||||| | ||||||||||||| Sbjct: 653 agaccaaggccgttggggagaagaagaag 681
>ref|XM_372840.3| PREDICTED: Homo sapiens similar to ribosomal protein L36 (LOC391209), mRNA Length = 525 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 caagaggaagcgggaggagct 110 ||||||||||||||||||||| Sbjct: 456 caagaggaagcgggaggagct 476
>ref|XM_926127.1| PREDICTED: Homo sapiens similar to ribosomal protein L36 (LOC642675), mRNA Length = 621 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 caagaggaagcgggaggagct 110 ||||||||||||||||||||| Sbjct: 552 caagaggaagcgggaggagct 572
>ref|XM_060417.2| PREDICTED: Homo sapiens similar to ribosomal protein L36 (LOC127295), mRNA Length = 333 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 caagaggaagcgggaggagct 110 ||||||||||||||||||||| Sbjct: 264 caagaggaagcgggaggagct 284
>emb|CR533465.1| Homo sapiens full open reading frame cDNA clone RZPDo834A0417D for gene RPL36, ribosomal protein L36; complete cds, incl. stopcodon Length = 330 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 caagaggaagcgggaggagct 110 ||||||||||||||||||||| Sbjct: 249 caagaggaagcgggaggagct 269
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 128 agaccaaggccgtcgaggagaagaagaag 156 ||||||||||||| | ||||||||||||| Sbjct: 3167179 agaccaaggccgttggggagaagaagaag 3167151
>ref|NG_002555.1| Homo sapiens ribosomal protein L36a pseudogene 3 (RPL36AP3) on chromosome 14 Length = 570 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 caagaggaagcgggaggagct 110 ||||||||||||||||||||| Sbjct: 356 caagaggaagcgggaggagct 376
>gb|AF401559.1| Ictalurus punctatus ribosomal protein L7 mRNA, partial cds Length = 840 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 376 cagatattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgct 428 ||||| ||||| || || ||| ||||| | ||||||||| ||||||||||||| Sbjct: 389 cagatcttcaacggcgtcttcgtcaagctcaacaaggcctccatcaacatgct 441
>gb|AC022215.4|AC022215 Homo sapiens BAC clone RP11-764I5 from 3, complete sequence Length = 180068 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 387 tggagtgttcctcaaggttaa 407 ||||||||||||||||||||| Sbjct: 69254 tggagtgttcctcaaggttaa 69274
>gb|AC007160.3|AC007160 Homo sapiens PAC clone RP1-146I3 from 14q24.3, complete sequence Length = 87600 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 caagaggaagcgggaggagct 110 ||||||||||||||||||||| Sbjct: 12895 caagaggaagcgggaggagct 12915
>gb|AF077043.1| Homo sapiens 60S ribosomal protein L36 mRNA, complete cds Length = 538 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 caagaggaagcgggaggagct 110 ||||||||||||||||||||| Sbjct: 394 caagaggaagcgggaggagct 414
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 2.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 44 atgtcgtccgnggcggcgaagtggtggt 71 ||||||||| ||||||||||||||||| Sbjct: 2399590 atgtcgtccttggcggcgaagtggtggt 2399563
>gb|AY892066.1| Synthetic construct Homo sapiens clone FLH027370.01L ribosomal protein L36 (RPL36) mRNA, partial cds Length = 318 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 caagaggaagcgggaggagct 110 ||||||||||||||||||||| Sbjct: 249 caagaggaagcgggaggagct 269
>gb|AY889618.1| Synthetic construct Homo sapiens clone FLH027374.01X ribosomal protein L36 (RPL36) mRNA, complete cds Length = 318 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 caagaggaagcgggaggagct 110 ||||||||||||||||||||| Sbjct: 249 caagaggaagcgggaggagct 269
>dbj|AP004691.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0453D01 Length = 147461 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 tctctctcgcctcctcctccc 21 ||||||||||||||||||||| Sbjct: 43964 tctctctcgcctcctcctccc 43984
>gb|BC091508.1| Homo sapiens ribosomal protein L36, transcript variant 1, mRNA (cDNA clone MGC:111171 IMAGE:30417606), complete cds Length = 439 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 caagaggaagcgggaggagct 110 ||||||||||||||||||||| Sbjct: 301 caagaggaagcgggaggagct 321
>emb|X62627.1|SCYL8A S.cerevisiae YL8A gene for ribosomal protein YL8 Length = 2120 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 491 tctacaagagaggttatggaaagctcaacaagcaaag 527 ||||||||||||||| || ||| ||||||||||||| Sbjct: 1544 tctacaagagaggtttcggtaagatcaacaagcaaag 1580
>emb|Z73554.1|SCYPL198W S.cerevisiae chromosome XVI reading frame ORF YPL198w Length = 2287 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 491 tctacaagagaggttatggaaagctcaacaagcaaag 527 ||||||||||||||| || ||| ||||||||||||| Sbjct: 1655 tctacaagagaggtttcggtaagatcaacaagcaaag 1691
>emb|Z72598.1|SCYGL076C S.cerevisiae chromosome VII reading frame ORF YGL076c Length = 3008 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 491 tctacaagagaggttatggaaagctcaacaagcaaag 527 ||||||||||||||| || ||| ||||||||||||| Sbjct: 711 tctacaagagaggtttcggtaagatcaacaagcaaag 675
>gb|DQ332874.1| Synthetic construct Saccharomyces cerevisiae clone FLH002665.01X RPL7A gene, complete sequence Length = 1662 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 491 tctacaagagaggttatggaaagctcaacaagcaaag 527 ||||||||||||||| || ||| ||||||||||||| Sbjct: 1370 tctacaagagaggtttcggtaagatcaacaagcaaag 1406
>emb|BX511012.5| Human DNA sequence from clone RP4-737A14 on chromosome 1, complete sequence Length = 106433 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 90 caagaggaagcgggaggagct 110 ||||||||||||||||||||| Sbjct: 77637 caagaggaagcgggaggagct 77617
>dbj|AB028989.2| Homo sapiens mRNA for KIAA1066 protein, partial cds Length = 5621 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 137 ccgtcgaggagaagaagaagtcgac 161 ||||| ||||||||||||||||||| Sbjct: 1808 ccgtccaggagaagaagaagtcgac 1832
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 64 gtggtggtgccggagtcggtg 84 ||||||||||||||||||||| Sbjct: 2061891 gtggtggtgccggagtcggtg 2061871
>dbj|D25232.1|YSCYL8B Yeast YL8B gene for ribosomal protein YL8, complete cds (exon1, exon2, exon3) Length = 1919 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 491 tctacaagagaggttatggaaagctcaacaagcaaag 527 ||||||||||||||| || ||| ||||||||||||| Sbjct: 1503 tctacaagagaggtttcggtaagatcaacaagcaaag 1539
>dbj|AB061833.1| Homo sapiens RPL36 gene for ribosomal protein L36, complete cds and sequence Length = 2975 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 caagaggaagcgggaggagct 110 ||||||||||||||||||||| Sbjct: 2300 caagaggaagcgggaggagct 2320
>dbj|AB046410.1| Homo sapiens RPL36 gene for ribosomal protein L36, partial cds Length = 174 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 caagaggaagcgggaggagct 110 ||||||||||||||||||||| Sbjct: 147 caagaggaagcgggaggagct 167
>emb|X69548.1|SCCTRHNM1 S.cerevisiae upstream region of CTR/HNM1 gene Length = 818 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 491 tctacaagagaggttatggaaagctcaacaagcaaag 527 ||||||||||||||| || ||| ||||||||||||| Sbjct: 106 tctacaagagaggtttcggtaagatcaacaagcaaag 142
>gb|AC155249.2| Mus musculus BAC clone RP24-254A5 from chromosome 9, complete sequence Length = 191932 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 1 tctctctcgcctcctcctccctct 24 |||||||| ||||||||||||||| Sbjct: 22518 tctctctctcctcctcctccctct 22541
>gb|AC166932.6| Mus musculus chromosome 7, clone RP23-349I13, complete sequence Length = 226889 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 1 tctctctcgcctcctcctccctct 24 |||||||| ||||||||||||||| Sbjct: 198902 tctctctcacctcctcctccctct 198879
>gb|AC113065.16| Mus musculus chromosome 7, clone RP23-263E7, complete sequence Length = 202134 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 1 tctctctcgcctcctcctccctct 24 |||||||| ||||||||||||||| Sbjct: 154072 tctctctcacctcctcctccctct 154095
>ref|XM_478054.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2804 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 tcgcctcctcctccctctgc 26 |||||||||||||||||||| Sbjct: 388 tcgcctcctcctccctctgc 369
>gb|AC163274.5| Mus musculus chromosome 1, clone RP23-202P19, complete sequence Length = 208546 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 agacagatattcaatggagt 392 |||||||||||||||||||| Sbjct: 106413 agacagatattcaatggagt 106432
>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete sequence Length = 2300533 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 ccaagaagatcctccagctt 363 |||||||||||||||||||| Sbjct: 1727713 ccaagaagatcctccagctt 1727732
>gb|AC068501.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-23C4, complete sequence Length = 196175 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 1 tctctctcgcctcctcctccctct 24 |||||||| ||||||||||||||| Sbjct: 146294 tctctctctcctcctcctccctct 146271
>ref|NM_030238.1| Mus musculus dynein cytoplasmic 1 heavy chain 1 (Dync1h1), mRNA Length = 14351 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 tcaagaggaagcgggaggag 108 |||||||||||||||||||| Sbjct: 1471 tcaagaggaagcgggaggag 1490
>ref|XM_654606.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN2094.2), mRNA Length = 5577 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 344 ccaagaagatcctccagctt 363 |||||||||||||||||||| Sbjct: 4970 ccaagaagatcctccagctt 4951
>gb|AC163991.3| Mus musculus chromosome 15, clone RP24-119L11, complete sequence Length = 152173 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 1 tctctctcgcctcctcctccctct 24 |||||||| ||||||||||||||| Sbjct: 17433 tctctctctcctcctcctccctct 17410
>gb|AC154644.2| Mus musculus BAC clone RP23-278G20 from chromosome 14, complete sequence Length = 175685 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 468 cctgaagagtgtgagggagt 487 |||||||||||||||||||| Sbjct: 53455 cctgaagagtgtgagggagt 53436
>gb|AC004884.1| Homo sapiens PAC clone RP4-778K6 from 7, complete sequence Length = 138244 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 caagaggaagcgggaggagc 109 |||||||||||||||||||| Sbjct: 31207 caagaggaagcgggaggagc 31226
>ref|XM_001003478.1| PREDICTED: Mus musculus similar to UPF0139 protein CGI-140 (LOC619941), mRNA Length = 312 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 ttcagcttaagcgtgaggcc 255 |||||||||||||||||||| Sbjct: 161 ttcagcttaagcgtgaggcc 142
>ref|XM_884324.2| PREDICTED: Mus musculus similar to UPF0139 protein CGI-140 (LOC619941), mRNA Length = 312 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 ttcagcttaagcgtgaggcc 255 |||||||||||||||||||| Sbjct: 161 ttcagcttaagcgtgaggcc 142
>ref|XM_915939.2| PREDICTED: Mus musculus similar to UPF0139 protein CGI-140 (LOC619941), mRNA Length = 312 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 ttcagcttaagcgtgaggcc 255 |||||||||||||||||||| Sbjct: 161 ttcagcttaagcgtgaggcc 142
>gb|AC131341.3| Mus musculus BAC clone RP24-263O10 from chromosome 17, complete sequence Length = 152220 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 ggattcctctgaccaacaac 546 |||||||||||||||||||| Sbjct: 96071 ggattcctctgaccaacaac 96052
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 cggagaaccgcaaggtcatc 180 |||||||||||||||||||| Sbjct: 1313803 cggagaaccgcaaggtcatc 1313822
>ref|XM_749527.1| Aspergillus fumigatus Af293 hypothetical protein (Afu3g09990) partial mRNA Length = 1314 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 aggccgtcgaggagaagaag 153 |||||||||||||||||||| Sbjct: 797 aggccgtcgaggagaagaag 816
>ref|XM_750090.1| Aspergillus fumigatus Af293 ATP-dependent RNA helicase (Afu2g08480) partial mRNA Length = 1896 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 ccaaagaccaagaagatcct 356 |||||||||||||||||||| Sbjct: 1387 ccaaagaccaagaagatcct 1406
>ref|XM_566981.1| Cryptococcus neoformans var. neoformans JEC21 60s ribosomal protein l7 (CNA06360) partial mRNA Length = 937 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 ccaagaagatcctccagctt 363 |||||||||||||||||||| Sbjct: 341 ccaagaagatcctccagctt 360
>ref|XM_811890.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506775.180) partial mRNA Length = 1812 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 gaagagtgtgagggagttga 490 |||||||||||||||||||| Sbjct: 315 gaagagtgtgagggagttga 296
>gb|AC122052.4| Mus musculus BAC clone RP24-462O18 from chromosome 3, complete sequence Length = 171593 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 508 ggaaagctcaacaagcaaag 527 |||||||||||||||||||| Sbjct: 56918 ggaaagctcaacaagcaaag 56899
>ref|XM_804506.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053511165.109) partial mRNA Length = 463 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 gaagagtgtgagggagttga 490 |||||||||||||||||||| Sbjct: 315 gaagagtgtgagggagttga 296
>ref|XM_849895.1| PREDICTED: Canis familiaris similar to 60S ribosomal protein L7 (LOC490819), mRNA Length = 933 Score = 40.1 bits (20), Expect = 8.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 487 ttgatctacaagagaggttatggaaagctcaacaag 522 |||||||||||| | |||||||| ||| |||||||| Sbjct: 580 ttgatctacaagtgtggttatggcaagatcaacaag 615
>gb|AF526208.1| Argopecten irradians isolate iolsaicl25ct43cn48 ribosomal protein L7 mRNA, partial cds Length = 822 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 406 aacaaggccaccatcaacatgctc 429 ||||||||||| |||||||||||| Sbjct: 378 aacaaggccactatcaacatgctc 401
>emb|BX294152.1| Pirellula sp. strain 1 complete genome; segment 20/24 Length = 304250 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 55 ggcggcgaagtggtggtgccggagtcgg 82 ||||||||||| | |||||||||||||| Sbjct: 154774 ggcggcgaagttgaggtgccggagtcgg 154801
>emb|AJ720578.1| Gallus gallus mRNA for hypothetical protein, clone 20k1 Length = 838 Score = 40.1 bits (20), Expect = 8.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 487 ttgatctacaagagaggttatggaaagctcaacaag 522 |||||||||||| | |||||||| ||| |||||||| Sbjct: 471 ttgatctacaagcgtggttatggcaagatcaacaag 506
>gb|DQ115914.1| Ajaia ajaja microsatellite Aaju14 sequence Length = 301 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 tctctctcgcctcctcctcc 20 |||||||||||||||||||| Sbjct: 52 tctctctcgcctcctcctcc 33
>ref|NM_001006345.1| Gallus gallus ribosomal protein L7 (RPL7), mRNA Length = 838 Score = 40.1 bits (20), Expect = 8.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 487 ttgatctacaagagaggttatggaaagctcaacaag 522 |||||||||||| | |||||||| ||| |||||||| Sbjct: 471 ttgatctacaagcgtggttatggcaagatcaacaag 506
>gb|AC026320.25| Homo sapiens 3 BAC RP11-655G22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 172681 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 gcctcctcctccctctgcag 28 |||||||||||||||||||| Sbjct: 82614 gcctcctcctccctctgcag 82595
>gb|AC174673.2| Mus musculus BAC clone RP24-435P4 from chromosome 7, complete sequence Length = 140309 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 1 tctctctcgcctcctcctccctct 24 |||||||| ||||||||||||||| Sbjct: 90531 tctctctctcctcctcctccctct 90508
>gb|AE011744.1| Xanthomonas axonopodis pv. citri str. 306, section 122 of 469 of the complete genome Length = 10963 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 cggagaaccgcaaggtcatc 180 |||||||||||||||||||| Sbjct: 9661 cggagaaccgcaaggtcatc 9680
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 55 ggcggcgaagtggtggtgccggag 78 |||||||| ||||||||||||||| Sbjct: 3642873 ggcggcgatgtggtggtgccggag 3642896
>gb|AC154654.2| Mus musculus BAC clone RP24-262O15 from chromosome 16, complete sequence Length = 173200 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 cgcctcctcctccctctgca 27 |||||||||||||||||||| Sbjct: 79264 cgcctcctcctccctctgca 79245
>emb|CR406282.1| Gallus gallus finished cDNA, clone ChEST860g6 Length = 1110 Score = 40.1 bits (20), Expect = 8.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 487 ttgatctacaagagaggttatggaaagctcaacaag 522 |||||||||||| | |||||||| ||| |||||||| Sbjct: 759 ttgatctacaagcgtggttatggcaagatcaacaag 794
>gb|AC004971.3| Homo sapiens PAC clone RP5-1125K23 from 7, complete sequence Length = 123253 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 tcgcctcctcctccctctgc 26 |||||||||||||||||||| Sbjct: 75409 tcgcctcctcctccctctgc 75390
>gb|AC152827.4| Mus musculus BAC clone RP23-60K23 from chromosome 12, complete sequence Length = 195066 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 tcaagaggaagcgggaggag 108 |||||||||||||||||||| Sbjct: 118680 tcaagaggaagcgggaggag 118699
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI, complete sequence Length = 1813164 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 493 tacaagagaggttatggaaagctcaacaagca 524 |||||||||||||| || ||| |||||||||| Sbjct: 285597 tacaagagaggttacggtaagatcaacaagca 285628
>emb|CR352384.1| Gallus gallus finished cDNA, clone ChEST81i17 Length = 799 Score = 40.1 bits (20), Expect = 8.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 487 ttgatctacaagagaggttatggaaagctcaacaag 522 |||||||||||| | |||||||| ||| |||||||| Sbjct: 447 ttgatctacaagcgtggttatggcaagatcaacaag 482
>emb|CR353058.1| Gallus gallus finished cDNA, clone ChEST411a23 Length = 811 Score = 40.1 bits (20), Expect = 8.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 487 ttgatctacaagagaggttatggaaagctcaacaag 522 |||||||||||| | |||||||| ||| |||||||| Sbjct: 454 ttgatctacaagcgtggttatggcaagatcaacaag 489
>emb|CR338953.1| Gallus gallus finished cDNA, clone ChEST990c17 Length = 808 Score = 40.1 bits (20), Expect = 8.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 487 ttgatctacaagagaggttatggaaagctcaacaag 522 |||||||||||| | |||||||| ||| |||||||| Sbjct: 457 ttgatctacaagcgtggttatggcaagatcaacaag 492
>gb|AF319045.1|AF319045 Homo sapiens contactin-associated protein 2 (CNTNAP2) mRNA, complete cds Length = 8107 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 aagaggaagcgggaggagct 110 |||||||||||||||||||| Sbjct: 10 aagaggaagcgggaggagct 29
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 ctctctcgcctcctcctccc 21 |||||||||||||||||||| Sbjct: 226596 ctctctcgcctcctcctccc 226615
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 tcgcctcctcctccctctgc 26 |||||||||||||||||||| Sbjct: 16918788 tcgcctcctcctccctctgc 16918769
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 tcgcctcctcctccctctgc 26 |||||||||||||||||||| Sbjct: 5888356 tcgcctcctcctccctctgc 5888375
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 tctctctcgcctcctcctcc 20 |||||||||||||||||||| Sbjct: 35629250 tctctctcgcctcctcctcc 35629231
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 gagaagaagaagtcgacgga 164 |||||||||||||||||||| Sbjct: 19815726 gagaagaagaagtcgacgga 19815745
>gb|AC154787.2| Mus musculus BAC clone RP24-468J5 from chromosome 17, complete sequence Length = 217844 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 ggattcctctgaccaacaac 546 |||||||||||||||||||| Sbjct: 158775 ggattcctctgaccaacaac 158794
>dbj|AP003516.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0047D12 Length = 145981 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 gagaagaagaagtcgacgga 164 |||||||||||||||||||| Sbjct: 38684 gagaagaagaagtcgacgga 38703
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 caagcagtacgccgaggagt 211 |||||||||||||||||||| Sbjct: 4547439 caagcagtacgccgaggagt 4547420
>gb|AY004877.1| Mus musculus cytoplasmic dynein heavy chain mRNA, complete cds Length = 14351 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 tcaagaggaagcgggaggag 108 |||||||||||||||||||| Sbjct: 1471 tcaagaggaagcgggaggag 1490
>gb|AF134206.1|AF134206 Emericella nidulans DopAp (dopA) mRNA, complete cds Length = 5800 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 344 ccaagaagatcctccagctt 363 |||||||||||||||||||| Sbjct: 5116 ccaagaagatcctccagctt 5097
>dbj|AP004776.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0452F04 Length = 171421 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 tctctctcgcctcctcctcc 20 |||||||||||||||||||| Sbjct: 145642 tctctctcgcctcctcctcc 145623
>dbj|AP004741.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0024N18 Length = 128739 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 tcgcctcctcctccctctgc 26 |||||||||||||||||||| Sbjct: 10008 tcgcctcctcctccctctgc 10027
>dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0537F07 Length = 147724 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 tcgcctcctcctccctctgc 26 |||||||||||||||||||| Sbjct: 89131 tcgcctcctcctccctctgc 89150
>dbj|AP004347.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0675B10 Length = 136229 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 tcgcctcctcctccctctgc 26 |||||||||||||||||||| Sbjct: 94542 tcgcctcctcctccctctgc 94523
>ref|NM_210820.1| Eremothecium gossypii AFL082Wp (AFL082W), mRNA Length = 732 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 493 tacaagagaggttatggaaagctcaacaagca 524 |||||||||||||| || ||| |||||||||| Sbjct: 442 tacaagagaggttacggtaagatcaacaagca 473
>gb|AC102905.9| Mus musculus chromosome 15, clone RP24-303N12, complete sequence Length = 153799 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 1 tctctctcgcctcctcctccctct 24 |||||||| ||||||||||||||| Sbjct: 113398 tctctctctcctcctcctccctct 113375
>dbj|AK066964.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092J24, full insert sequence Length = 2804 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 tcgcctcctcctccctctgc 26 |||||||||||||||||||| Sbjct: 388 tcgcctcctcctccctctgc 369
>gb|AY625898.1| Pseudomonas aeruginosa phage F116, complete genome Length = 65195 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 cgccgagaagaagaccaagg 136 |||||||||||||||||||| Sbjct: 30065 cgccgagaagaagaccaagg 30084
>emb|CT025694.11| Mouse DNA sequence from clone RP24-66N5 on chromosome 14, complete sequence Length = 203022 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 468 cctgaagagtgtgagggagt 487 |||||||||||||||||||| Sbjct: 69249 cctgaagagtgtgagggagt 69230
>gb|AC004263.1|AC004263 Homo sapiens PAC clone 278C19 from 12q, complete sequence Length = 106921 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 ctctcgcctcctcctccctc 23 |||||||||||||||||||| Sbjct: 73298 ctctcgcctcctcctccctc 73317
>gb|AC165150.3| Mus musculus BAC clone RP24-105I10 from chromosome 7, complete sequence Length = 210763 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 1 tctctctcgcctcctcctccctct 24 |||||||| ||||||||||||||| Sbjct: 64368 tctctctctcctcctcctccctct 64345
>gb|U87941.1|HSPAXN1 Human paxillin gene, exon 1 Length = 194 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 ctctcgcctcctcctccctc 23 |||||||||||||||||||| Sbjct: 125 ctctcgcctcctcctccctc 106
>emb|AL596265.12| Mouse DNA sequence from clone RP23-134O19 on chromosome 12, complete sequence Length = 205332 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tcaagaggaagcgggaggag 108 |||||||||||||||||||| Sbjct: 187854 tcaagaggaagcgggaggag 187835
>gb|AC174672.2| Mus musculus BAC clone RP24-566B4 from chromosome 7, complete sequence Length = 167219 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 1 tctctctcgcctcctcctccctct 24 |||||||| ||||||||||||||| Sbjct: 120157 tctctctctcctcctcctccctct 120180
>emb|AL935060.17| Mouse DNA sequence from clone RP24-151H6 on chromosome 2, complete sequence Length = 212007 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 tttgagacagatattcaatg 388 |||||||||||||||||||| Sbjct: 211258 tttgagacagatattcaatg 211239
>gb|AC140377.4| Mus musculus BAC clone RP24-84K14 from chromosome 7, complete sequence Length = 246043 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 1 tctctctcgcctcctcctccctct 24 |||||||| ||||||||||||||| Sbjct: 242967 tctctctctcctcctcctccctct 242944
>emb|AL928998.9| Mouse DNA sequence from clone RP23-58A8 on chromosome 2, complete sequence Length = 115361 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 tttgagacagatattcaatg 388 |||||||||||||||||||| Sbjct: 1251 tttgagacagatattcaatg 1232
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 ctctctcgcctcctcctccc 21 |||||||||||||||||||| Sbjct: 226596 ctctctcgcctcctcctccc 226615
>emb|BX293566.5| Mouse DNA sequence from clone RP23-441G5 on chromosome 2, complete sequence Length = 132841 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 406 aacaaggccaccatcaacat 425 |||||||||||||||||||| Sbjct: 58143 aacaaggccaccatcaacat 58162
>emb|BX000501.4|CNS08CDR Oryza sativa chromosome 11, . BAC OSJNBa0032J07 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 160673 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 ctctctcgcctcctcctccc 21 |||||||||||||||||||| Sbjct: 78397 ctctctcgcctcctcctccc 78378
>gb|AC139317.4| Mus musculus BAC clone RP24-495N6 from 15, complete sequence Length = 182415 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 ctcgcctcctcctccctctg 25 |||||||||||||||||||| Sbjct: 36931 ctcgcctcctcctccctctg 36912
>gb|AC132457.4| Mus musculus BAC clone RP23-140B24 from 7, complete sequence Length = 210092 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 1 tctctctcgcctcctcctccctct 24 |||||||| ||||||||||||||| Sbjct: 23712 tctctctctcctcctcctccctct 23735
>dbj|AP006080.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT48M22, TM0118c, complete sequence Length = 91116 Score = 40.1 bits (20), Expect = 8.6 Identities = 74/92 (80%) Strand = Plus / Plus Query: 319 ggtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 378 ||||| ||| ||||||| || ||||| | || |||| | ||||| ||| | ||||||||| Sbjct: 19867 ggtattaatcccatgcatcctaagacaaggaggatcttgcagctgttgaggttgagacag 19926 Query: 379 atattcaatggagtgttcctcaaggttaacaa 410 || || |||||||| || || || |||||||| Sbjct: 19927 atttttaatggagtttttcttaaagttaacaa 19958
>emb|AJ417839.1|RME417839 Rhododendron metternichii var. hondoense microsatellite DNA, clone RM1D5 Length = 389 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 1 tctctctcgcctcctcctccctct 24 |||||||| ||||||||||||||| Sbjct: 70 tctctctctcctcctcctccctct 93
>emb|AL691489.20| Mouse DNA sequence from clone RP23-176N9 on chromosome 2, complete sequence Length = 194864 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 ttcagcttaagcgtgaggcc 255 |||||||||||||||||||| Sbjct: 63769 ttcagcttaagcgtgaggcc 63788
>gb|M19529.1|PIGFSA Pig follistatin (FS) gene, complete cds Length = 6247 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 tctctctcgcctcctcctcc 20 |||||||||||||||||||| Sbjct: 2625 tctctctcgcctcctcctcc 2644 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,361,543 Number of Sequences: 3902068 Number of extensions: 6361543 Number of successful extensions: 125766 Number of sequences better than 10.0: 212 Number of HSP's better than 10.0 without gapping: 213 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 124498 Number of HSP's gapped (non-prelim): 1225 length of query: 633 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 610 effective length of database: 17,143,297,704 effective search space: 10457411599440 effective search space used: 10457411599440 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
