ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags1j08 |
|---|---|
| Clone Library Name | barley_pub |
>TPIS_HORVU (P34937) Triosephosphate isomerase, cytosolic (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 252 Score = 68.6 bits (166), Expect = 5e-12 Identities = 31/31 (100%), Positives = 31/31 (100%) Frame = +3 Query: 54 GRKFFVGGNWKCNGTVEQVEAIVQTLNAGQI 146 GRKFFVGGNWKCNGTVEQVEAIVQTLNAGQI Sbjct: 1 GRKFFVGGNWKCNGTVEQVEAIVQTLNAGQI 31
>TPIS_SECCE (P46226) Triosephosphate isomerase, cytosolic (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 252 Score = 63.2 bits (152), Expect = 2e-10 Identities = 28/31 (90%), Positives = 28/31 (90%) Frame = +3 Query: 54 GRKFFVGGNWKCNGTVEQVEAIVQTLNAGQI 146 GRKFFVGGNWKCNGTV QVE IV TLNAGQI Sbjct: 1 GRKFFVGGNWKCNGTVSQVETIVNTLNAGQI 31
>TPIS_MAIZE (P12863) Triosephosphate isomerase, cytosolic (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 252 Score = 60.1 bits (144), Expect = 2e-09 Identities = 25/31 (80%), Positives = 28/31 (90%) Frame = +3 Query: 54 GRKFFVGGNWKCNGTVEQVEAIVQTLNAGQI 146 GRKFFVGGNWKCNGT +QVE IV+TLN GQ+ Sbjct: 1 GRKFFVGGNWKCNGTTDQVEKIVKTLNEGQV 31
>TPIS_ORYSA (P48494) Triosephosphate isomerase, cytosolic (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 252 Score = 57.0 bits (136), Expect = 1e-08 Identities = 24/31 (77%), Positives = 27/31 (87%) Frame = +3 Query: 54 GRKFFVGGNWKCNGTVEQVEAIVQTLNAGQI 146 GRKFFVGGNWKCNGT +QV+ IV+ LN GQI Sbjct: 1 GRKFFVGGNWKCNGTTDQVDKIVKILNEGQI 31
>TPIS_PETHY (P48495) Triosephosphate isomerase, cytosolic (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 254 Score = 56.2 bits (134), Expect = 2e-08 Identities = 23/32 (71%), Positives = 27/32 (84%) Frame = +3 Query: 51 MGRKFFVGGNWKCNGTVEQVEAIVQTLNAGQI 146 MGRKFFVGGNWKCNGT E+V+ I+ TLNA + Sbjct: 1 MGRKFFVGGNWKCNGTAEEVKKILATLNAADV 32
>TPIS_ARATH (P48491) Triosephosphate isomerase, cytosolic (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 254 Score = 55.5 bits (132), Expect = 4e-08 Identities = 23/32 (71%), Positives = 26/32 (81%) Frame = +3 Query: 51 MGRKFFVGGNWKCNGTVEQVEAIVQTLNAGQI 146 M RKFFVGGNWKCNGT E+V+ IV TLN Q+ Sbjct: 1 MARKFFVGGNWKCNGTAEEVKKIVNTLNEAQV 32
>TPIS_STELP (P48497) Triosephosphate isomerase, cytosolic (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 257 Score = 53.1 bits (126), Expect = 2e-07 Identities = 23/28 (82%), Positives = 23/28 (82%) Frame = +3 Query: 51 MGRKFFVGGNWKCNGTVEQVEAIVQTLN 134 MGRKFFVGGNWKCNGT E V IV TLN Sbjct: 1 MGRKFFVGGNWKCNGTQESVSKIVDTLN 28
>TPIS_COPJA (P21820) Triosephosphate isomerase, cytosolic (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 253 Score = 53.1 bits (126), Expect = 2e-07 Identities = 22/32 (68%), Positives = 26/32 (81%) Frame = +3 Query: 51 MGRKFFVGGNWKCNGTVEQVEAIVQTLNAGQI 146 MGRKFFVGGNWKCNGT E+V+ IV LN ++ Sbjct: 1 MGRKFFVGGNWKCNGTSEEVKKIVTLLNEAEV 32
>TPIC_SECCE (P46225) Triosephosphate isomerase, chloroplast precursor (EC| 5.3.1.1) (TIM) (Triose-phosphate isomerase) Length = 298 Score = 46.6 bits (109), Expect = 2e-05 Identities = 20/38 (52%), Positives = 25/38 (65%) Frame = +3 Query: 33 RPASVAMGRKFFVGGNWKCNGTVEQVEAIVQTLNAGQI 146 R ++A KFFVGGNWKCNGT E + +V LNA + Sbjct: 39 RLVAMAGSGKFFVGGNWKCNGTKESISKLVSDLNAATL 76
>TPIC_SPIOL (P48496) Triosephosphate isomerase, chloroplast precursor (EC| 5.3.1.1) (TIM) (Triose-phosphate isomerase) Length = 322 Score = 44.3 bits (103), Expect = 9e-05 Identities = 18/35 (51%), Positives = 24/35 (68%) Frame = +3 Query: 42 SVAMGRKFFVGGNWKCNGTVEQVEAIVQTLNAGQI 146 ++A KFFVGGNWKCNGT E + +V LN+ + Sbjct: 66 AMAGSGKFFVGGNWKCNGTKESITKLVSDLNSATL 100
>TPIC_FRAAN (Q9M4S8) Triosephosphate isomerase, chloroplast precursor (EC| 5.3.1.1) (TIM) (Triose-phosphate isomerase) Length = 314 Score = 43.9 bits (102), Expect = 1e-04 Identities = 19/47 (40%), Positives = 29/47 (61%) Frame = +3 Query: 6 SARSQPTQYRPASVAMGRKFFVGGNWKCNGTVEQVEAIVQTLNAGQI 146 S+ S+ ++A KFFVGGNWKCNGT + + +V LN+ ++ Sbjct: 46 SSSSRKASRAVVAMAGTGKFFVGGNWKCNGTKDLISKLVSDLNSAKL 92
>TPIS_YARLI (Q6C2T9) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 247 Score = 43.9 bits (102), Expect = 1e-04 Identities = 18/32 (56%), Positives = 26/32 (81%) Frame = +3 Query: 51 MGRKFFVGGNWKCNGTVEQVEAIVQTLNAGQI 146 M R FFVGGN+K NG++E ++AIV+ LNA ++ Sbjct: 1 MSRTFFVGGNFKMNGSLESIKAIVERLNASEL 32
>TPIS_LATCH (P00941) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 247 Score = 43.1 bits (100), Expect = 2e-04 Identities = 17/30 (56%), Positives = 23/30 (76%) Frame = +3 Query: 57 RKFFVGGNWKCNGTVEQVEAIVQTLNAGQI 146 RKFFVGGNWK NG + + ++QTLNA ++ Sbjct: 3 RKFFVGGNWKMNGDKKSLGELIQTLNAAKV 32
>TPIC_ARATH (Q9SKP6) Triosephosphate isomerase, chloroplast precursor (EC| 5.3.1.1) (TIM) (Triose-phosphate isomerase) Length = 315 Score = 42.7 bits (99), Expect = 3e-04 Identities = 16/35 (45%), Positives = 24/35 (68%) Frame = +3 Query: 42 SVAMGRKFFVGGNWKCNGTVEQVEAIVQTLNAGQI 146 ++A KFFVGGNWKCNGT + + ++ LN+ + Sbjct: 59 AMAGSGKFFVGGNWKCNGTKDSIAKLISDLNSATL 93
>TPIS_NEUCR (Q7S2Z9) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 248 Score = 42.4 bits (98), Expect = 4e-04 Identities = 19/32 (59%), Positives = 24/32 (75%) Frame = +3 Query: 51 MGRKFFVGGNWKCNGTVEQVEAIVQTLNAGQI 146 M RKFFVGGN+K NGT + ++AIV LN Q+ Sbjct: 1 MARKFFVGGNFKMNGTRKDLKAIVDNLNNAQL 32
>TPIS_CAEEL (Q10657) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 247 Score = 41.6 bits (96), Expect = 6e-04 Identities = 19/29 (65%), Positives = 20/29 (68%) Frame = +3 Query: 51 MGRKFFVGGNWKCNGTVEQVEAIVQTLNA 137 M RKFFVGGNWK NG V+ IV LNA Sbjct: 1 MTRKFFVGGNWKMNGDYASVDGIVTFLNA 29
>TPIS_RABIT (P00939) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 248 Score = 41.6 bits (96), Expect = 6e-04 Identities = 17/33 (51%), Positives = 23/33 (69%) Frame = +3 Query: 48 AMGRKFFVGGNWKCNGTVEQVEAIVQTLNAGQI 146 A RKFFVGGNWK NG + + ++ TLNA ++ Sbjct: 1 APSRKFFVGGNWKMNGRKKNLGELITTLNAAKV 33
>TPIS_PLAFA (Q07412) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 248 Score = 41.6 bits (96), Expect = 6e-04 Identities = 14/28 (50%), Positives = 21/28 (75%) Frame = +3 Query: 51 MGRKFFVGGNWKCNGTVEQVEAIVQTLN 134 M RK+FV NWKCNGT+E ++++ + N Sbjct: 1 MARKYFVAANWKCNGTLESIKSLTNSFN 28
>TPIS_PLAF7 (Q7KQM0) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 248 Score = 41.6 bits (96), Expect = 6e-04 Identities = 14/28 (50%), Positives = 21/28 (75%) Frame = +3 Query: 51 MGRKFFVGGNWKCNGTVEQVEAIVQTLN 134 M RK+FV NWKCNGT+E ++++ + N Sbjct: 1 MARKYFVAANWKCNGTLESIKSLTNSFN 28
>TPIS_PIG (Q29371) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 248 Score = 41.6 bits (96), Expect = 6e-04 Identities = 17/34 (50%), Positives = 23/34 (67%) Frame = +3 Query: 45 VAMGRKFFVGGNWKCNGTVEQVEAIVQTLNAGQI 146 +A RKFFVGGNWK NG + ++ TLNA ++ Sbjct: 1 MAPARKFFVGGNWKMNGRKNNLGELINTLNAAKL 34
>TPIS_PANTR (P60175) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 248 Score = 41.6 bits (96), Expect = 6e-04 Identities = 17/33 (51%), Positives = 23/33 (69%) Frame = +3 Query: 48 AMGRKFFVGGNWKCNGTVEQVEAIVQTLNAGQI 146 A RKFFVGGNWK NG + + ++ TLNA ++ Sbjct: 1 APSRKFFVGGNWKMNGRKQSLGELIGTLNAAKV 33
>TPIS_ORYLA (Q589R5) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 248 Score = 41.6 bits (96), Expect = 6e-04 Identities = 16/30 (53%), Positives = 21/30 (70%) Frame = +3 Query: 57 RKFFVGGNWKCNGTVEQVEAIVQTLNAGQI 146 R+FFVGGNWK NG E +E ++ TLN + Sbjct: 4 RRFFVGGNWKMNGNKESLEELMSTLNTASL 33
>TPIS_MACMU (P15426) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 248 Score = 41.6 bits (96), Expect = 6e-04 Identities = 17/33 (51%), Positives = 23/33 (69%) Frame = +3 Query: 48 AMGRKFFVGGNWKCNGTVEQVEAIVQTLNAGQI 146 A RKFFVGGNWK NG + + ++ TLNA ++ Sbjct: 1 APSRKFFVGGNWKMNGRKQNLGELIGTLNAAKV 33
>TPIS_MACFA (Q60HC9) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 248 Score = 41.6 bits (96), Expect = 6e-04 Identities = 17/33 (51%), Positives = 23/33 (69%) Frame = +3 Query: 48 AMGRKFFVGGNWKCNGTVEQVEAIVQTLNAGQI 146 A RKFFVGGNWK NG + + ++ TLNA ++ Sbjct: 1 APSRKFFVGGNWKMNGRKQNLGELIGTLNAAKV 33
>TPIS_HUMAN (P60174) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 248 Score = 41.6 bits (96), Expect = 6e-04 Identities = 17/33 (51%), Positives = 23/33 (69%) Frame = +3 Query: 48 AMGRKFFVGGNWKCNGTVEQVEAIVQTLNAGQI 146 A RKFFVGGNWK NG + + ++ TLNA ++ Sbjct: 1 APSRKFFVGGNWKMNGRKQSLGELIGTLNAAKV 33
>TPIS_CANFA (P54714) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 248 Score = 41.6 bits (96), Expect = 6e-04 Identities = 17/33 (51%), Positives = 23/33 (69%) Frame = +3 Query: 48 AMGRKFFVGGNWKCNGTVEQVEAIVQTLNAGQI 146 A RKFFVGGNWK NG + + ++ TLNA ++ Sbjct: 1 APSRKFFVGGNWKMNGRKKNLGELITTLNAAKV 33
>TPIS_ASPOR (Q9HGY8) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 251 Score = 41.6 bits (96), Expect = 6e-04 Identities = 17/32 (53%), Positives = 24/32 (75%) Frame = +3 Query: 51 MGRKFFVGGNWKCNGTVEQVEAIVQTLNAGQI 146 M R+FFVGGN+K NGT E + AI++ LN ++ Sbjct: 1 MPRQFFVGGNFKMNGTAESITAIIKNLNEAKL 32
>TPIS_DEBHA (Q6BMB8) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 248 Score = 39.7 bits (91), Expect = 0.002 Identities = 18/32 (56%), Positives = 22/32 (68%) Frame = +3 Query: 51 MGRKFFVGGNWKCNGTVEQVEAIVQTLNAGQI 146 M R+FFVGGN+K NGT E V IV LN ++ Sbjct: 1 MARQFFVGGNFKMNGTRESVSKIVDGLNKAEL 32
>TPIS_RAT (P48500) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 248 Score = 39.3 bits (90), Expect = 0.003 Identities = 17/33 (51%), Positives = 23/33 (69%) Frame = +3 Query: 48 AMGRKFFVGGNWKCNGTVEQVEAIVQTLNAGQI 146 A RKFFVGGNWK NG + + ++ TLNA ++ Sbjct: 1 APSRKFFVGGNWKMNGRKKCLGELICTLNAAKL 33
>TPIS_PARBR (Q96VN5) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 249 Score = 39.3 bits (90), Expect = 0.003 Identities = 16/32 (50%), Positives = 23/32 (71%) Frame = +3 Query: 51 MGRKFFVGGNWKCNGTVEQVEAIVQTLNAGQI 146 M RKFFVGGN+K NGT + + I+ LN+ ++ Sbjct: 1 MPRKFFVGGNFKMNGTAKSITHIITNLNSAKL 32
>TPIS_EMENI (P04828) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 249 Score = 39.3 bits (90), Expect = 0.003 Identities = 16/32 (50%), Positives = 22/32 (68%) Frame = +3 Query: 51 MGRKFFVGGNWKCNGTVEQVEAIVQTLNAGQI 146 M RKFFVGGN+K NG E +I++ LN+ + Sbjct: 1 MPRKFFVGGNFKMNGNAESTTSIIKNLNSANL 32
>TPIS_CHICK (P00940) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 247 Score = 39.3 bits (90), Expect = 0.003 Identities = 15/30 (50%), Positives = 21/30 (70%) Frame = +3 Query: 57 RKFFVGGNWKCNGTVEQVEAIVQTLNAGQI 146 RKFFVGGNWK NG + + ++ TLN ++ Sbjct: 3 RKFFVGGNWKMNGDKKSLGELIHTLNGAKL 32
>TPIS_CANAL (Q9P940) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 247 Score = 38.9 bits (89), Expect = 0.004 Identities = 15/30 (50%), Positives = 22/30 (73%) Frame = +3 Query: 57 RKFFVGGNWKCNGTVEQVEAIVQTLNAGQI 146 R+FFVGGN+K NGT +Q+ +I+ LN + Sbjct: 2 RQFFVGGNFKANGTKQQITSIIDNLNKADL 31
>TPIS_SCHPO (P07669) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 248 Score = 38.5 bits (88), Expect = 0.005 Identities = 15/30 (50%), Positives = 24/30 (80%) Frame = +3 Query: 57 RKFFVGGNWKCNGTVEQVEAIVQTLNAGQI 146 RKFFVGGN+K NG++E ++ I++ LN ++ Sbjct: 2 RKFFVGGNFKMNGSLESMKTIIEGLNTTKL 31
>TPIS_MOUSE (P17751) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 248 Score = 38.5 bits (88), Expect = 0.005 Identities = 16/30 (53%), Positives = 21/30 (70%) Frame = +3 Query: 57 RKFFVGGNWKCNGTVEQVEAIVQTLNAGQI 146 RKFFVGGNWK NG + + ++ TLNA + Sbjct: 4 RKFFVGGNWKMNGRKKCLGELICTLNAANV 33
>TPIS_KLUMA (Q70JN8) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 248 Score = 38.5 bits (88), Expect = 0.005 Identities = 16/32 (50%), Positives = 22/32 (68%) Frame = +3 Query: 51 MGRKFFVGGNWKCNGTVEQVEAIVQTLNAGQI 146 M R FF+GGN+K NGT ++ IV+ LN+ I Sbjct: 1 MARTFFIGGNFKMNGTKASIKEIVERLNSASI 32
>TPIS_ENTHI (O02611) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 261 Score = 37.7 bits (86), Expect = 0.009 Identities = 14/26 (53%), Positives = 19/26 (73%) Frame = +3 Query: 60 KFFVGGNWKCNGTVEQVEAIVQTLNA 137 KF VGGNWKCNGT+ +E + + + A Sbjct: 5 KFVVGGNWKCNGTLASIETLTKGVAA 30
>TPIS_ZYGBA (Q9C401) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 248 Score = 37.7 bits (86), Expect = 0.009 Identities = 16/32 (50%), Positives = 22/32 (68%) Frame = +3 Query: 51 MGRKFFVGGNWKCNGTVEQVEAIVQTLNAGQI 146 M R FFVGGN+K NGT ++ IV+ LN ++ Sbjct: 1 MARTFFVGGNFKLNGTKSSIKEIVERLNNAKL 32
>TPIS_CANGA (Q6FRI3) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 248 Score = 37.7 bits (86), Expect = 0.009 Identities = 16/32 (50%), Positives = 21/32 (65%) Frame = +3 Query: 51 MGRKFFVGGNWKCNGTVEQVEAIVQTLNAGQI 146 M R FFVGGN+K NGT + ++ IV LN + Sbjct: 1 MARTFFVGGNFKLNGTKKSIKEIVDRLNTASL 32
>TPIS_ASHGO (Q750Y8) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 248 Score = 37.4 bits (85), Expect = 0.011 Identities = 15/32 (46%), Positives = 22/32 (68%) Frame = +3 Query: 51 MGRKFFVGGNWKCNGTVEQVEAIVQTLNAGQI 146 M R FFVGGN+K NG+ + ++ IV+ LN + Sbjct: 1 MARTFFVGGNFKLNGSKQSIKEIVERLNTADL 32
>TPIS_DROME (P29613) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 348 Score = 37.0 bits (84), Expect = 0.015 Identities = 15/32 (46%), Positives = 21/32 (65%) Frame = +3 Query: 51 MGRKFFVGGNWKCNGTVEQVEAIVQTLNAGQI 146 M RKF VGGNWK NG + + I +TL++ + Sbjct: 102 MSRKFCVGGNWKMNGDQKSIAEIAKTLSSAAL 133
>TPIS_DROYA (O77458) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 247 Score = 37.0 bits (84), Expect = 0.015 Identities = 15/32 (46%), Positives = 21/32 (65%) Frame = +3 Query: 51 MGRKFFVGGNWKCNGTVEQVEAIVQTLNAGQI 146 M RKF VGGNWK NG + + I +TL++ + Sbjct: 1 MSRKFCVGGNWKMNGDQKSIAEIAKTLSSAAL 32
>TPIS_DROSI (Q7JNS1) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 247 Score = 37.0 bits (84), Expect = 0.015 Identities = 15/32 (46%), Positives = 21/32 (65%) Frame = +3 Query: 51 MGRKFFVGGNWKCNGTVEQVEAIVQTLNAGQI 146 M RKF VGGNWK NG + + I +TL++ + Sbjct: 1 MSRKFCVGGNWKMNGDQKSIAEIAKTLSSAAL 32
>TPIS_YEAST (P00942) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 247 Score = 36.2 bits (82), Expect = 0.026 Identities = 15/30 (50%), Positives = 21/30 (70%) Frame = +3 Query: 57 RKFFVGGNWKCNGTVEQVEAIVQTLNAGQI 146 R FFVGGN+K NG+ + ++ IV+ LN I Sbjct: 2 RTFFVGGNFKLNGSKQSIKEIVERLNTASI 31
>TPIS_KLULA (Q6CJG5) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 248 Score = 35.8 bits (81), Expect = 0.033 Identities = 15/32 (46%), Positives = 20/32 (62%) Frame = +3 Query: 51 MGRKFFVGGNWKCNGTVEQVEAIVQTLNAGQI 146 M R FF+GGN+K NG+ ++ IV LN I Sbjct: 1 MARTFFIGGNFKMNGSKASIKEIVDRLNGASI 32
>TPIS_TAESO (Q9GTX8) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 250 Score = 35.0 bits (79), Expect = 0.057 Identities = 14/27 (51%), Positives = 16/27 (59%) Frame = +3 Query: 51 MGRKFFVGGNWKCNGTVEQVEAIVQTL 131 M RK FVGGNWK NG+ + TL Sbjct: 1 MTRKLFVGGNWKMNGSYSHINTFFDTL 27
>TPIS_CULTA (P30741) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 246 Score = 34.7 bits (78), Expect = 0.074 Identities = 14/31 (45%), Positives = 18/31 (58%) Frame = +3 Query: 54 GRKFFVGGNWKCNGTVEQVEAIVQTLNAGQI 146 GRKF VGGNWK NG + + + L G + Sbjct: 1 GRKFCVGGNWKMNGDKASIADLCKVLTTGPL 31
>TPIS_SCHMA (P48501) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 253 Score = 34.3 bits (77), Expect = 0.097 Identities = 13/26 (50%), Positives = 20/26 (76%) Frame = +3 Query: 57 RKFFVGGNWKCNGTVEQVEAIVQTLN 134 RKFFVGGNWK NG+ + + +++ L+ Sbjct: 5 RKFFVGGNWKMNGSRDDNDKLLKLLS 30
>TPIS_SCHJA (Q27775) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 252 Score = 34.3 bits (77), Expect = 0.097 Identities = 13/26 (50%), Positives = 19/26 (73%) Frame = +3 Query: 57 RKFFVGGNWKCNGTVEQVEAIVQTLN 134 RKFFVGGNWK NG+ + ++ +L+ Sbjct: 5 RKFFVGGNWKMNGSRADNKVLIHSLS 30
>TPIS_COPCI (Q12574) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 251 Score = 32.7 bits (73), Expect = 0.28 Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 1/33 (3%) Frame = +3 Query: 51 MGRKFFVGGNWKCNGT-VEQVEAIVQTLNAGQI 146 M R FFVGGNWK N T + +A V+ LN + Sbjct: 1 MTRSFFVGGNWKLNPTSLSAAKAPVEALNKADL 33
>TPIS_LEIME (P48499) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 251 Score = 32.0 bits (71), Expect = 0.48 Identities = 11/19 (57%), Positives = 13/19 (68%) Frame = +3 Query: 78 NWKCNGTVEQVEAIVQTLN 134 NWKCNGT +E +VQ N Sbjct: 12 NWKCNGTTASIEKLVQVFN 30
>TPI1_GIALA (P36186) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 257 Score = 31.6 bits (70), Expect = 0.63 Identities = 12/30 (40%), Positives = 23/30 (76%) Frame = +3 Query: 57 RKFFVGGNWKCNGTVEQVEAIVQTLNAGQI 146 R+ F+GGN+KCNG+++ +++ V + A +I Sbjct: 4 RRPFIGGNFKCNGSLDFIKSHVAAIAAHKI 33
>TPIS_STRT2 (Q8VVC1) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 252 Score = 30.8 bits (68), Expect = 1.1 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = +3 Query: 51 MGRKFFVGGNWKCNGTVEQVEAIVQTL 131 M RK F+ GNWK N E+ +A V+ + Sbjct: 1 MSRKPFIAGNWKMNKNPEEAKAFVEAV 27
>TPIS_STRR6 (P66943) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 252 Score = 30.8 bits (68), Expect = 1.1 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = +3 Query: 51 MGRKFFVGGNWKCNGTVEQVEAIVQTL 131 M RK F+ GNWK N E+ +A V+ + Sbjct: 1 MSRKPFIAGNWKMNKNPEEAKAFVEAV 27
>TPIS_STRPN (P66942) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 252 Score = 30.8 bits (68), Expect = 1.1 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = +3 Query: 51 MGRKFFVGGNWKCNGTVEQVEAIVQTL 131 M RK F+ GNWK N E+ +A V+ + Sbjct: 1 MSRKPFIAGNWKMNKNPEEAKAFVEAV 27
>TPI2_GIALA (P36187) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 257 Score = 30.4 bits (67), Expect = 1.4 Identities = 11/30 (36%), Positives = 24/30 (80%) Frame = +3 Query: 57 RKFFVGGNWKCNGTVEQVEAIVQTLNAGQI 146 R+ F+GGN+KCNG+++ +++ V ++ + +I Sbjct: 4 RRPFIGGNFKCNGSLDFIKSHVASIASYKI 33
>TPIS_STRA5 (Q8E0H0) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 252 Score = 30.4 bits (67), Expect = 1.4 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = +3 Query: 51 MGRKFFVGGNWKCNGTVEQVEAIVQTL 131 M RK F+ GNWK N E+ +A ++ + Sbjct: 1 MSRKPFIAGNWKMNKNPEEAKAFIEAV 27
>TPIS_STRA3 (Q8E644) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 252 Score = 30.4 bits (67), Expect = 1.4 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = +3 Query: 51 MGRKFFVGGNWKCNGTVEQVEAIVQTL 131 M RK F+ GNWK N E+ +A ++ + Sbjct: 1 MSRKPFIAGNWKMNKNPEEAKAFIEAV 27
>TPIS_CHLPN (Q9Z6J6) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 254 Score = 29.6 bits (65), Expect = 2.4 Identities = 12/27 (44%), Positives = 19/27 (70%) Frame = +3 Query: 51 MGRKFFVGGNWKCNGTVEQVEAIVQTL 131 M R+ +V GNWK + T+++ + VQTL Sbjct: 1 MTRQSYVLGNWKMHKTIQEAKEYVQTL 27
>TPIS_TRYCR (P52270) Triosephosphate isomerase, glycosomal (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 251 Score = 29.3 bits (64), Expect = 3.1 Identities = 10/20 (50%), Positives = 15/20 (75%) Frame = +3 Query: 78 NWKCNGTVEQVEAIVQTLNA 137 NWKCNG+ + +++TLNA Sbjct: 12 NWKCNGSESLLVPLIETLNA 31
>TPIS_BUCAI (P57393) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 255 Score = 28.9 bits (63), Expect = 4.1 Identities = 9/25 (36%), Positives = 16/25 (64%) Frame = +3 Query: 57 RKFFVGGNWKCNGTVEQVEAIVQTL 131 +KFF+ NWK NG ++ + + + L Sbjct: 2 KKFFITANWKLNGNIKMISSFFKYL 26
>HIS7_XYLFA (Q9PBC7) Histidine biosynthesis bifunctional protein hisB| [Includes: Histidinol-phosphatase (EC 3.1.3.15); Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) (IGPD)] Length = 375 Score = 28.9 bits (63), Expect = 4.1 Identities = 15/46 (32%), Positives = 23/46 (50%) Frame = +2 Query: 8 RPFPTNPIPTRLRRHGPQVLRRRQLEMQWNRRAGRGDRPNSERWTD 145 R +PT+ PTR G V + ++ W R A GDRP ++ + Sbjct: 92 RSWPTDNAPTRKPGIGLMVAYLQDRDIDWARSAMVGDRPTDLQFAE 137
>TPIS_NITEU (Q82TU1) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 252 Score = 28.9 bits (63), Expect = 4.1 Identities = 11/30 (36%), Positives = 20/30 (66%) Frame = +3 Query: 51 MGRKFFVGGNWKCNGTVEQVEAIVQTLNAG 140 MGR FV GNWK +G++ + + ++ + +G Sbjct: 1 MGRAGFVAGNWKMHGSLVRNQELLDAVVSG 30
>DNLJ_RHOMR (P49421) DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase| [NAD+]) Length = 712 Score = 28.5 bits (62), Expect = 5.3 Identities = 16/41 (39%), Positives = 20/41 (48%) Frame = +2 Query: 2 PVRPFPTNPIPTRLRRHGPQVLRRRQLEMQWNRRAGRGDRP 124 PV P P PTRL G +R+R E + RG+RP Sbjct: 198 PVDP-AVGPPPTRLEVRGEVYMRKRDFERLNEQLQARGERP 237
>TPIS_BACTN (Q8A0U2) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 252 Score = 28.5 bits (62), Expect = 5.3 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = +3 Query: 57 RKFFVGGNWKCNGTVEQVEAIVQTLN 134 RK V GNWK N T+++ A+ + LN Sbjct: 2 RKNIVAGNWKMNKTLQEGIALAKELN 27
>HIFA3_HAEIN (P45988) Major fimbrial subunit precursor (Major pilin)| Length = 212 Score = 28.1 bits (61), Expect = 7.0 Identities = 10/22 (45%), Positives = 15/22 (68%) Frame = -1 Query: 70 TKNLRPMATEAGRYWVGWERAD 5 T N +P+AT+ G Y+ W+ AD Sbjct: 87 TTNNKPVATKVGAYFYSWKNAD 108
>TPIS_PORGI (Q7MWI7) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 251 Score = 28.1 bits (61), Expect = 7.0 Identities = 12/27 (44%), Positives = 18/27 (66%) Frame = +3 Query: 57 RKFFVGGNWKCNGTVEQVEAIVQTLNA 137 RK V GNWK N T+++ A+ + L+A Sbjct: 2 RKNIVAGNWKMNKTLQEGLALAKELDA 28
>TPIS_LACLA (P50918) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 251 Score = 28.1 bits (61), Expect = 7.0 Identities = 10/25 (40%), Positives = 16/25 (64%) Frame = +3 Query: 57 RKFFVGGNWKCNGTVEQVEAIVQTL 131 RK + GNWK N T+ + +A V+ + Sbjct: 2 RKPIIAGNWKMNKTLSEAQAFVEAV 26
>TPIS_COXBU (Q83BQ3) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 255 Score = 27.7 bits (60), Expect = 9.1 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = +3 Query: 51 MGRKFFVGGNWKCNGTVEQVEAIVQTLNAG 140 M R+ V GNWK +G+ E V +++ L G Sbjct: 1 MQRRPLVAGNWKMHGSRESVGQLLRALKHG 30
>TPIS_BOMMO (P82204) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) (Fragment) Length = 24 Score = 27.7 bits (60), Expect = 9.1 Identities = 13/23 (56%), Positives = 14/23 (60%) Frame = +3 Query: 54 GRKFFVGGNWKCNGTVEQVEAIV 122 GRKF VGGN K NG + IV Sbjct: 1 GRKFVVGGNXKMNGDKNXIIEIV 23
>TPIS_VIBF1 (Q5E8E5) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 256 Score = 27.7 bits (60), Expect = 9.1 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = +3 Query: 69 VGGNWKCNGTVEQVEAIVQTLNA 137 V GNWK NG+ E V ++ LNA Sbjct: 6 VMGNWKLNGSKEMVVELLNGLNA 28
>TPIS_BACHD (Q9K715) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 251 Score = 27.7 bits (60), Expect = 9.1 Identities = 11/23 (47%), Positives = 15/23 (65%) Frame = +3 Query: 57 RKFFVGGNWKCNGTVEQVEAIVQ 125 RK + GNWK N TV + +A V+ Sbjct: 2 RKPIIAGNWKMNKTVGEAKAFVE 24 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 19,960,657 Number of Sequences: 219361 Number of extensions: 291465 Number of successful extensions: 1241 Number of sequences better than 10.0: 72 Number of HSP's better than 10.0 without gapping: 1229 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1241 length of database: 80,573,946 effective HSP length: 24 effective length of database: 75,309,282 effective search space used: 1807422768 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
