ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags1i21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_467648.1| Oryza sativa (japonica cultivar-group), mRNA 561 e-157
2dbj|AK121645.1| Oryza sativa (japonica cultivar-group) cDNA clon... 561 e-157
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 299 5e-78
4dbj|AP005319.3| Oryza sativa (japonica cultivar-group) genomic D... 299 5e-78
5ref|NM_102303.3| Arabidopsis thaliana unknown protein AT1G24610 ... 68 3e-08
6gb|AY072532.1| Arabidopsis thaliana unknown protein mRNA, comple... 68 3e-08
7gb|AY042836.1| Arabidopsis thaliana Unknown protein mRNA, comple... 68 3e-08
8emb|BX814067.1|CNS0ADRG Arabidopsis thaliana Full-length cDNA Co... 68 3e-08
9gb|AC000103.2|AC000103 Genomic sequence for Arabidopsis thaliana... 68 3e-08
10emb|BX814480.1|CNS0ADMW Arabidopsis thaliana Full-length cDNA Co... 66 1e-07
11gb|AY088409.1| Arabidopsis thaliana clone 6503 mRNA, complete se... 60 8e-06
12gb|AC117224.3| Mus musculus BAC clone RP23-356N8 from chromosome... 46 0.13
13gb|AC157596.5| Mus musculus BAC clone RP23-240B9 from chromosome... 46 0.13
14gb|AY627332.1| Megacopta cribraria cytochrome oxidase subunit I ... 42 2.0
15gb|AY253138.1| Pachygrontha sp. WCW-2003 cytochrome oxidase subu... 42 2.0
16gb|AF230666.2| Homo sapiens chromosome 8 clone CTC-137K3 map 8q2... 42 2.0
17emb|AL138646.2|ATT8B10 Arabidopsis thaliana DNA chromosome 3, BA... 42 2.0
18gb|AF230667.3| Homo sapiens chromosome 8 clone CTC-326J4 map 8q2... 42 2.0
19gb|AC140035.9| Medicago truncatula clone mth2-25n18, complete se... 42 2.0
20emb|CT573071.1| Kuenenia stuttgartiensis genome fragment KUST_E ... 42 2.0
21gb|AC004793.2|F28K20 Arabidopsis thaliana chromosome 1 BAC F28K2... 42 2.0
22gb|AC102039.8| Mus musculus chromosome 5, clone RP23-262L7, comp... 40 7.8
23ref|XM_639613.1| Dictyostelium discoideum hypothetical protein (... 40 7.8
24ref|XM_639454.1| Dictyostelium discoideum hypothetical protein (... 40 7.8
25ref|XM_425235.1| PREDICTED: Gallus gallus similar to inward rect... 40 7.8
26gb|AC165070.2| Phakopsora pachyrhizi clone JGIAFNA-829C10, compl... 40 7.8
27emb|AL391832.10| Human DNA sequence from clone RP11-443B7 on chr... 40 7.8
28emb|BX470173.6| Human DNA sequence from clone RP11-739C15 on chr... 40 7.8
29gb|AC068308.12| Homo sapiens 3 BAC RP11-275H4 (Roswell Park Canc... 40 7.8
30gb|AC102282.20| Mus musculus chromosome 5, clone RP24-319P5, com... 40 7.8
31gb|AC027316.3|AC027316 Homo sapiens chromosome 5 clone CTC-304C4... 40 7.8
32gb|AC013406.7| Homo sapiens BAC clone RP11-341F20 from 2, comple... 40 7.8
33gb|AC116984.2| Dictyostelium discoideum chromosome 2 map 2567470... 40 7.8
34emb|AL928598.7| Mouse DNA sequence from clone RP23-326I20 on chr... 40 7.8
35gb|AC148919.1| Gallus gallus BAC clone CH261-43B19 from chromoso... 40 7.8
36emb|AL929012.4| Mouse DNA sequence from clone RP23-477G20 on chr... 40 7.8 
>ref|XM_467648.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1649

 Score =  561 bits (283), Expect = e-157
 Identities = 497/566 (87%), Gaps = 2/566 (0%)
 Strand = Plus / Plus

                                                                        
Query: 9    gattcgttttggtggccatatatcgcgaacctgccagagacctttaccgtaccaatcttc 68
            ||||| || ||||||||||||||||| || ||||||||||| ||||| ||||| || || 
Sbjct: 542  gattctttctggtggccatatatcgcaaatctgccagagacttttactgtaccgatattt 601

                                                                        
Query: 69   tttccaggggnaagacataaagaacttgcaatatgctcctctcctccaccagnataaata 128
            |||||||||| |||||||||| |||||||| ||||| ||||| |||||||||  | ||||
Sbjct: 602  tttccagggg-aagacataaaaaacttgcagtatgcccctcttctccaccagg-tgaata 659

                                                                        
Query: 129  aaagatgtcgtttccttctcgagtttgagaaagaggtaaaacagaagcttggcactgtgc 188
            |||| ||||| ||||||||||||||||| ||||| || ||||| |||||||| || ||||
Sbjct: 660  aaaggtgtcgcttccttctcgagtttgaaaaagaagtgaaacataagcttggtacagtgc 719

                                                                        
Query: 189  cctcaggagatcatcctttttgtggacaagatgtacactcgtcctcccttggatgggcta 248
            |||  | |||||||||||||||||||||||||||| |||| || ||||||||||||||||
Sbjct: 720  ccttggaagatcatcctttttgtggacaagatgtaaactcatcttcccttggatgggcta 779

                                                                        
Query: 249  tgtccgcagcgtcttcacgagcattccgtctgcatggtgaaatcccaatgttgttgcccc 308
            |||| ||||| ||| | || ||||||||| |||||||||||||||||||| ||||||| |
Sbjct: 780  tgtcagcagcatctactcgggcattccgtttgcatggtgaaatcccaatgctgttgcctc 839

                                                                        
Query: 309  ttgttgatatgtgcaaccatagttttagcccgaatgctaggattgtccaggatggagatg 368
            || |||||||||| ||||||||||||| ||| |||||||||||||||||||| ||| |||
Sbjct: 840  ttattgatatgtgtaaccatagttttaacccaaatgctaggattgtccaggaaggaaatg 899

                                                                        
Query: 369  tcgagagccctgatatgtcagttaaggttattgctgagacgcagattgatcaaaacgctg 428
            | || |||||||||||||||||||||||| ||||||||||  | ||||||||||| ||||
Sbjct: 900  tggatagccctgatatgtcagttaaggttgttgctgagacaaaaattgatcaaaatgctg 959

                                                                        
Query: 429  ctgttacactgaactatggttgctaccccaatgatttttatcttcttgattatggatttg 488
            | || ||||||||||||||||||||||| |||||||| |  |||||||||||||||||||
Sbjct: 960  cggtaacactgaactatggttgctaccctaatgatttcttccttcttgattatggatttg 1019

                                                                        
Query: 489  tagtaacatcgaacccatacgatcaagtggaactgagctatgatgggaatcttctcgatg 548
            || ||||||| ||  | || |||||||||||||||||||||||||| | ||| || ||||
Sbjct: 1020 taataacatcaaattcgtatgatcaagtggaactgagctatgatggaactctcctagatg 1079

                                      
Query: 549  ctgctagcatggcagcaggggtttct 574
            ||||||||||||||||||| ||||||
Sbjct: 1080 ctgctagcatggcagcaggagtttct 1105
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>dbj|AK121645.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033058C09, full
            insert sequence
          Length = 1649

 Score =  561 bits (283), Expect = e-157
 Identities = 497/566 (87%), Gaps = 2/566 (0%)
 Strand = Plus / Plus

                                                                        
Query: 9    gattcgttttggtggccatatatcgcgaacctgccagagacctttaccgtaccaatcttc 68
            ||||| || ||||||||||||||||| || ||||||||||| ||||| ||||| || || 
Sbjct: 542  gattctttctggtggccatatatcgcaaatctgccagagacttttactgtaccgatattt 601

                                                                        
Query: 69   tttccaggggnaagacataaagaacttgcaatatgctcctctcctccaccagnataaata 128
            |||||||||| |||||||||| |||||||| ||||| ||||| |||||||||  | ||||
Sbjct: 602  tttccagggg-aagacataaaaaacttgcagtatgcccctcttctccaccagg-tgaata 659

                                                                        
Query: 129  aaagatgtcgtttccttctcgagtttgagaaagaggtaaaacagaagcttggcactgtgc 188
            |||| ||||| ||||||||||||||||| ||||| || ||||| |||||||| || ||||
Sbjct: 660  aaaggtgtcgcttccttctcgagtttgaaaaagaagtgaaacataagcttggtacagtgc 719

                                                                        
Query: 189  cctcaggagatcatcctttttgtggacaagatgtacactcgtcctcccttggatgggcta 248
            |||  | |||||||||||||||||||||||||||| |||| || ||||||||||||||||
Sbjct: 720  ccttggaagatcatcctttttgtggacaagatgtaaactcatcttcccttggatgggcta 779

                                                                        
Query: 249  tgtccgcagcgtcttcacgagcattccgtctgcatggtgaaatcccaatgttgttgcccc 308
            |||| ||||| ||| | || ||||||||| |||||||||||||||||||| ||||||| |
Sbjct: 780  tgtcagcagcatctactcgggcattccgtttgcatggtgaaatcccaatgctgttgcctc 839

                                                                        
Query: 309  ttgttgatatgtgcaaccatagttttagcccgaatgctaggattgtccaggatggagatg 368
            || |||||||||| ||||||||||||| ||| |||||||||||||||||||| ||| |||
Sbjct: 840  ttattgatatgtgtaaccatagttttaacccaaatgctaggattgtccaggaaggaaatg 899

                                                                        
Query: 369  tcgagagccctgatatgtcagttaaggttattgctgagacgcagattgatcaaaacgctg 428
            | || |||||||||||||||||||||||| ||||||||||  | ||||||||||| ||||
Sbjct: 900  tggatagccctgatatgtcagttaaggttgttgctgagacaaaaattgatcaaaatgctg 959

                                                                        
Query: 429  ctgttacactgaactatggttgctaccccaatgatttttatcttcttgattatggatttg 488
            | || ||||||||||||||||||||||| |||||||| |  |||||||||||||||||||
Sbjct: 960  cggtaacactgaactatggttgctaccctaatgatttcttccttcttgattatggatttg 1019

                                                                        
Query: 489  tagtaacatcgaacccatacgatcaagtggaactgagctatgatgggaatcttctcgatg 548
            || ||||||| ||  | || |||||||||||||||||||||||||| | ||| || ||||
Sbjct: 1020 taataacatcaaattcgtatgatcaagtggaactgagctatgatggaactctcctagatg 1079

                                      
Query: 549  ctgctagcatggcagcaggggtttct 574
            ||||||||||||||||||| ||||||
Sbjct: 1080 ctgctagcatggcagcaggagtttct 1105
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  299 bits (151), Expect = 5e-78
 Identities = 241/271 (88%)
 Strand = Plus / Plus

                                                                            
Query: 125      aataaaagatgtcgtttccttctcgagtttgagaaagaggtaaaacagaagcttggcact 184
                |||||||| ||||| ||||||||||||||||| ||||| || ||||| |||||||| || 
Sbjct: 30613291 aataaaaggtgtcgcttccttctcgagtttgaaaaagaagtgaaacataagcttggtaca 30613350

                                                                            
Query: 185      gtgccctcaggagatcatcctttttgtggacaagatgtacactcgtcctcccttggatgg 244
                |||||||  | |||||||||||||||||||||||||||| |||| || ||||||||||||
Sbjct: 30613351 gtgcccttggaagatcatcctttttgtggacaagatgtaaactcatcttcccttggatgg 30613410

                                                                            
Query: 245      gctatgtccgcagcgtcttcacgagcattccgtctgcatggtgaaatcccaatgttgttg 304
                |||||||| ||||| ||| | || ||||||||| |||||||||||||||||||| |||||
Sbjct: 30613411 gctatgtcagcagcatctactcgggcattccgtttgcatggtgaaatcccaatgctgttg 30613470

                                                                            
Query: 305      ccccttgttgatatgtgcaaccatagttttagcccgaatgctaggattgtccaggatgga 364
                || ||| |||||||||| ||||||||||||| ||| |||||||||||||||||||| |||
Sbjct: 30613471 cctcttattgatatgtgtaaccatagttttaacccaaatgctaggattgtccaggaagga 30613530

                                               
Query: 365      gatgtcgagagccctgatatgtcagttaagg 395
                 |||| || ||||||||||||||||||||||
Sbjct: 30613531 aatgtggatagccctgatatgtcagttaagg 30613561



 Score =  186 bits (94), Expect = 5e-44
 Identities = 160/182 (87%)
 Strand = Plus / Plus

                                                                            
Query: 393      aggttattgctgagacgcagattgatcaaaacgctgctgttacactgaactatggttgct 452
                ||||| ||||||||||  | ||||||||||| ||||| || |||||||||||||||||||
Sbjct: 30613784 aggttgttgctgagacaaaaattgatcaaaatgctgcggtaacactgaactatggttgct 30613843

                                                                            
Query: 453      accccaatgatttttatcttcttgattatggatttgtagtaacatcgaacccatacgatc 512
                |||| |||||||| |  ||||||||||||||||||||| ||||||| ||  | || ||||
Sbjct: 30613844 accctaatgatttcttccttcttgattatggatttgtaataacatcaaattcgtatgatc 30613903

                                                                            
Query: 513      aagtggaactgagctatgatgggaatcttctcgatgctgctagcatggcagcaggggttt 572
                |||||||||||||||||||||| | ||| || ||||||||||||||||||||||| ||||
Sbjct: 30613904 aagtggaactgagctatgatggaactctcctagatgctgctagcatggcagcaggagttt 30613963

                  
Query: 573      ct 574
                ||
Sbjct: 30613964 ct 30613965



 Score =  103 bits (52), Expect = 6e-19
 Identities = 98/112 (87%), Gaps = 1/112 (0%)
 Strand = Plus / Plus

                                                                            
Query: 9        gattcgttttggtggccatatatcgcgaacctgccagagacctttaccgtaccaatcttc 68
                ||||| || ||||||||||||||||| || ||||||||||| ||||| ||||| || || 
Sbjct: 30613111 gattctttctggtggccatatatcgcaaatctgccagagacttttactgtaccgatattt 30613170

                                                                    
Query: 69       tttccaggggnaagacataaagaacttgcaatatgctcctctcctccaccag 120
                |||||||||| |||||||||| |||||||| ||||| ||||| |||||||||
Sbjct: 30613171 tttccagggg-aagacataaaaaacttgcagtatgcccctcttctccaccag 30613221
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>dbj|AP005319.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0643A10
          Length = 187931

 Score =  299 bits (151), Expect = 5e-78
 Identities = 241/271 (88%)
 Strand = Plus / Plus

                                                                          
Query: 125    aataaaagatgtcgtttccttctcgagtttgagaaagaggtaaaacagaagcttggcact 184
              |||||||| ||||| ||||||||||||||||| ||||| || ||||| |||||||| || 
Sbjct: 125299 aataaaaggtgtcgcttccttctcgagtttgaaaaagaagtgaaacataagcttggtaca 125358

                                                                          
Query: 185    gtgccctcaggagatcatcctttttgtggacaagatgtacactcgtcctcccttggatgg 244
              |||||||  | |||||||||||||||||||||||||||| |||| || ||||||||||||
Sbjct: 125359 gtgcccttggaagatcatcctttttgtggacaagatgtaaactcatcttcccttggatgg 125418

                                                                          
Query: 245    gctatgtccgcagcgtcttcacgagcattccgtctgcatggtgaaatcccaatgttgttg 304
              |||||||| ||||| ||| | || ||||||||| |||||||||||||||||||| |||||
Sbjct: 125419 gctatgtcagcagcatctactcgggcattccgtttgcatggtgaaatcccaatgctgttg 125478

                                                                          
Query: 305    ccccttgttgatatgtgcaaccatagttttagcccgaatgctaggattgtccaggatgga 364
              || ||| |||||||||| ||||||||||||| ||| |||||||||||||||||||| |||
Sbjct: 125479 cctcttattgatatgtgtaaccatagttttaacccaaatgctaggattgtccaggaagga 125538

                                             
Query: 365    gatgtcgagagccctgatatgtcagttaagg 395
               |||| || ||||||||||||||||||||||
Sbjct: 125539 aatgtggatagccctgatatgtcagttaagg 125569



 Score =  186 bits (94), Expect = 5e-44
 Identities = 160/182 (87%)
 Strand = Plus / Plus

                                                                          
Query: 393    aggttattgctgagacgcagattgatcaaaacgctgctgttacactgaactatggttgct 452
              ||||| ||||||||||  | ||||||||||| ||||| || |||||||||||||||||||
Sbjct: 125792 aggttgttgctgagacaaaaattgatcaaaatgctgcggtaacactgaactatggttgct 125851

                                                                          
Query: 453    accccaatgatttttatcttcttgattatggatttgtagtaacatcgaacccatacgatc 512
              |||| |||||||| |  ||||||||||||||||||||| ||||||| ||  | || ||||
Sbjct: 125852 accctaatgatttcttccttcttgattatggatttgtaataacatcaaattcgtatgatc 125911

                                                                          
Query: 513    aagtggaactgagctatgatgggaatcttctcgatgctgctagcatggcagcaggggttt 572
              |||||||||||||||||||||| | ||| || ||||||||||||||||||||||| ||||
Sbjct: 125912 aagtggaactgagctatgatggaactctcctagatgctgctagcatggcagcaggagttt 125971

                
Query: 573    ct 574
              ||
Sbjct: 125972 ct 125973



 Score =  103 bits (52), Expect = 6e-19
 Identities = 98/112 (87%), Gaps = 1/112 (0%)
 Strand = Plus / Plus

                                                                          
Query: 9      gattcgttttggtggccatatatcgcgaacctgccagagacctttaccgtaccaatcttc 68
              ||||| || ||||||||||||||||| || ||||||||||| ||||| ||||| || || 
Sbjct: 125119 gattctttctggtggccatatatcgcaaatctgccagagacttttactgtaccgatattt 125178

                                                                  
Query: 69     tttccaggggnaagacataaagaacttgcaatatgctcctctcctccaccag 120
              |||||||||| |||||||||| |||||||| ||||| ||||| |||||||||
Sbjct: 125179 tttccagggg-aagacataaaaaacttgcagtatgcccctcttctccaccag 125229
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>ref|NM_102303.3| Arabidopsis thaliana unknown protein AT1G24610 mRNA, complete cds
          Length = 2181

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 64/73 (87%), Gaps = 1/73 (1%)
 Strand = Plus / Plus

                                                                       
Query: 91  aacttgcaatatgctcctctcctccaccagnataaataaaagatgtcgtttccttctcga 150
           |||||||||||||||||||| |||||||||  | || |||||||| ||||| ||||| ||
Sbjct: 495 aacttgcaatatgctcctcttctccaccagg-tcaacaaaagatgccgttttcttcttga 553

                        
Query: 151 gtttgagaaagag 163
           ||||||| |||||
Sbjct: 554 gtttgagcaagag 566
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>gb|AY072532.1| Arabidopsis thaliana unknown protein mRNA, complete cds
          Length = 1151

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 64/73 (87%), Gaps = 1/73 (1%)
 Strand = Plus / Plus

                                                                       
Query: 91  aacttgcaatatgctcctctcctccaccagnataaataaaagatgtcgtttccttctcga 150
           |||||||||||||||||||| |||||||||  | || |||||||| ||||| ||||| ||
Sbjct: 124 aacttgcaatatgctcctcttctccaccagg-tcaacaaaagatgccgttttcttcttga 182

                        
Query: 151 gtttgagaaagag 163
           ||||||| |||||
Sbjct: 183 gtttgagcaagag 195
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>gb|AY042836.1| Arabidopsis thaliana Unknown protein mRNA, complete cds
          Length = 1649

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 64/73 (87%), Gaps = 1/73 (1%)
 Strand = Plus / Plus

                                                                       
Query: 91  aacttgcaatatgctcctctcctccaccagnataaataaaagatgtcgtttccttctcga 150
           |||||||||||||||||||| |||||||||  | || |||||||| ||||| ||||| ||
Sbjct: 425 aacttgcaatatgctcctcttctccaccagg-tcaacaaaagatgccgttttcttcttga 483

                        
Query: 151 gtttgagaaagag 163
           ||||||| |||||
Sbjct: 484 gtttgagcaagag 496
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>emb|BX814067.1|CNS0ADRG Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB55ZB07 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1563

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 64/73 (87%), Gaps = 1/73 (1%)
 Strand = Plus / Plus

                                                                       
Query: 91  aacttgcaatatgctcctctcctccaccagnataaataaaagatgtcgtttccttctcga 150
           |||||||||||||||||||| |||||||||  | || |||||||| ||||| ||||| ||
Sbjct: 480 aacttgcaatatgctcctcttctccaccagg-tcaacaaaagatgccgttttcttcttga 538

                        
Query: 151 gtttgagaaagag 163
           ||||||| |||||
Sbjct: 539 gtttgagcaagag 551
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>gb|AC000103.2|AC000103 Genomic sequence for Arabidopsis thaliana BAC F21J9 from chromosome I,
             complete sequence
          Length = 99392

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 64/73 (87%), Gaps = 1/73 (1%)
 Strand = Plus / Minus

                                                                         
Query: 91    aacttgcaatatgctcctctcctccaccagnataaataaaagatgtcgtttccttctcga 150
             |||||||||||||||||||| |||||||||  | || |||||||| ||||| ||||| ||
Sbjct: 82881 aacttgcaatatgctcctcttctccaccagg-tcaacaaaagatgccgttttcttcttga 82823

                          
Query: 151   gtttgagaaagag 163
             ||||||| |||||
Sbjct: 82822 gtttgagcaagag 82810
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>emb|BX814480.1|CNS0ADMW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB76ZC06 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1502

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 63/72 (87%), Gaps = 1/72 (1%)
 Strand = Plus / Plus

                                                                       
Query: 91  aacttgcaatatgctcctctcctccaccagnataaataaaagatgtcgtttccttctcga 150
           |||||||||||||||||||| |||||||||  | || |||||||| ||||| ||||| ||
Sbjct: 478 aacttgcaatatgctcctcttctccaccagg-tcaacaaaagatgccgttttcttcttga 536

                       
Query: 151 gtttgagaaaga 162
           ||||||| ||||
Sbjct: 537 gtttgagcaaga 548
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>gb|AY088409.1| Arabidopsis thaliana clone 6503 mRNA, complete sequence
          Length = 1599

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 63/73 (86%), Gaps = 1/73 (1%)
 Strand = Plus / Plus

                                                                       
Query: 91  aacttgcaatatgctcctctcctccaccagnataaataaaagatgtcgtttccttctcga 150
           |||||||||||||||||||| |||||||||  | || |||| ||| ||||| ||||| ||
Sbjct: 495 aacttgcaatatgctcctcttctccaccagg-tcaacaaaatatgccgttttcttcttga 553

                        
Query: 151 gtttgagaaagag 163
           ||||||| |||||
Sbjct: 554 gtttgagcaagag 566
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>gb|AC117224.3| Mus musculus BAC clone RP23-356N8 from chromosome 16, complete sequence
          Length = 197831

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 164   gtaaaacagaagcttggcactgt 186
             |||||||||||||||||||||||
Sbjct: 23916 gtaaaacagaagcttggcactgt 23894
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>gb|AC157596.5| Mus musculus BAC clone RP23-240B9 from chromosome 16, complete sequence
          Length = 204275

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 164   gtaaaacagaagcttggcactgt 186
             |||||||||||||||||||||||
Sbjct: 94719 gtaaaacagaagcttggcactgt 94741
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>gb|AY627332.1| Megacopta cribraria cytochrome oxidase subunit I (COI) gene,
           partial cds; mitochondrial
          Length = 789

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 156 agaaagaggtaaaacagaagc 176
           |||||||||||||||||||||
Sbjct: 30  agaaagaggtaaaacagaagc 50
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>gb|AY253138.1| Pachygrontha sp. WCW-2003 cytochrome oxidase subunit I gene,
           partial cds; mitochondrial
          Length = 1086

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 156 agaaagaggtaaaacagaagc 176
           |||||||||||||||||||||
Sbjct: 741 agaaagaggtaaaacagaagc 761
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>gb|AF230666.2| Homo sapiens chromosome 8 clone CTC-137K3 map 8q24.3, complete sequence
          Length = 86867

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 166   aaaacagaagcttggcactgtgccc 190
             ||||||||||||||||||| |||||
Sbjct: 66376 aaaacagaagcttggcactttgccc 66352
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>emb|AL138646.2|ATT8B10 Arabidopsis thaliana DNA chromosome 3, BAC clone T8B10
          Length = 103787

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 469   tcttcttgattatggatttgt 489
             |||||||||||||||||||||
Sbjct: 88423 tcttcttgattatggatttgt 88403
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>gb|AF230667.3| Homo sapiens chromosome 8 clone CTC-326J4 map 8q24.3, complete
            sequence
          Length = 97168

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 166  aaaacagaagcttggcactgtgccc 190
            ||||||||||||||||||| |||||
Sbjct: 3367 aaaacagaagcttggcactttgccc 3343
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>gb|AC140035.9| Medicago truncatula clone mth2-25n18, complete sequence
          Length = 120870

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 457   caatgatttttatcttcttgattatggatttgt 489
             ||||||| |||  ||||||||||||||||||||
Sbjct: 85744 caatgatcttttccttcttgattatggatttgt 85712
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>emb|CT573071.1| Kuenenia stuttgartiensis genome fragment KUST_E (5 of 5)
          Length = 2199546

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 149     gagtttgagaaagaggtaaaa 169
               |||||||||||||||||||||
Sbjct: 1802567 gagtttgagaaagaggtaaaa 1802587
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>gb|AC004793.2|F28K20 Arabidopsis thaliana chromosome 1 BAC F28K20 sequence, complete
             sequence
          Length = 76458

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 469   tcttcttgattatggatttgt 489
             |||||||||||||||||||||
Sbjct: 60572 tcttcttgattatggatttgt 60552
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>gb|AC102039.8| Mus musculus chromosome 5, clone RP23-262L7, complete sequence
          Length = 168142

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 461   gatttttatcttcttgatta 480
             ||||||||||||||||||||
Sbjct: 13639 gatttttatcttcttgatta 13658
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>ref|XM_639613.1| Dictyostelium discoideum hypothetical protein (DDB0217113), partial
           mRNA
          Length = 657

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 452 taccccaatgatttttatct 471
           ||||||||||||||||||||
Sbjct: 415 taccccaatgatttttatct 396
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>ref|XM_639454.1| Dictyostelium discoideum hypothetical protein (DDB0217343), partial
           mRNA
          Length = 657

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 452 taccccaatgatttttatct 471
           ||||||||||||||||||||
Sbjct: 415 taccccaatgatttttatct 396
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>ref|XM_425235.1| PREDICTED: Gallus gallus similar to inward rectifier potassium
           channel Kir2.2 (LOC427662), mRNA
          Length = 2790

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 549 ctgctagcatggcagcaggg 568
           ||||||||||||||||||||
Sbjct: 295 ctgctagcatggcagcaggg 276
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>gb|AC165070.2| Phakopsora pachyrhizi clone JGIAFNA-829C10, complete sequence
          Length = 26958

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 80   aagacataaagaacttgcaatatgctcc 107
            ||||||||||| ||||| ||||||||||
Sbjct: 4376 aagacataaaggacttggaatatgctcc 4349
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>emb|AL391832.10| Human DNA sequence from clone RP11-443B7 on chromosome 1 Contains two
              novel genes (LOC284527), complete sequence
          Length = 144648

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 170    cagaagcttggcactgtgcc 189
              ||||||||||||||||||||
Sbjct: 130513 cagaagcttggcactgtgcc 130532
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>emb|BX470173.6| Human DNA sequence from clone RP11-739C15 on chromosome 1, complete
             sequence
          Length = 66303

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 170   cagaagcttggcactgtgcc 189
             ||||||||||||||||||||
Sbjct: 13093 cagaagcttggcactgtgcc 13112
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>gb|AC068308.12| Homo sapiens 3 BAC RP11-275H4 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 154495

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 458    aatgatttttatcttcttga 477
              ||||||||||||||||||||
Sbjct: 126449 aatgatttttatcttcttga 126468
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>gb|AC102282.20| Mus musculus chromosome 5, clone RP24-319P5, complete sequence
          Length = 175569

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 461    gatttttatcttcttgatta 480
              ||||||||||||||||||||
Sbjct: 164056 gatttttatcttcttgatta 164075
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>gb|AC027316.3|AC027316 Homo sapiens chromosome 5 clone CTC-304C4, complete sequence
          Length = 112361

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 89    agaacttgcaatatgctcctctcc 112
             |||||| |||||||||||||||||
Sbjct: 17058 agaactagcaatatgctcctctcc 17081
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>gb|AC013406.7| Homo sapiens BAC clone RP11-341F20 from 2, complete sequence
          Length = 190018

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 87     aaagaacttgcaatatgctc 106
              ||||||||||||||||||||
Sbjct: 121850 aaagaacttgcaatatgctc 121869
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>gb|AC116984.2| Dictyostelium discoideum chromosome 2 map 2567470-3108875 strain AX4,
              complete sequence
          Length = 541399

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 452    taccccaatgatttttatct 471
              ||||||||||||||||||||
Sbjct: 275519 taccccaatgatttttatct 275500
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>emb|AL928598.7| Mouse DNA sequence from clone RP23-326I20 on chromosome 2, complete
             sequence
          Length = 148583

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 150   agtttgagaaagaggtaaaa 169
             ||||||||||||||||||||
Sbjct: 57922 agtttgagaaagaggtaaaa 57903
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>gb|AC148919.1| Gallus gallus BAC clone CH261-43B19 from chromosome unknown,
           complete sequence
          Length = 163278

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 279 tgcatggtgaaatcccaatgttgt 302
           ||||||||||| ||||||||||||
Sbjct: 274 tgcatggtgaattcccaatgttgt 297
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>emb|AL929012.4| Mouse DNA sequence from clone RP23-477G20 on chromosome 2, complete
             sequence
          Length = 201304

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 164   gtaaaacagaagcttggcactgtg 187
             |||||||||||||| |||||||||
Sbjct: 53020 gtaaaacagaagctaggcactgtg 53043


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,851,843
Number of Sequences: 3902068
Number of extensions: 4851843
Number of successful extensions: 99056
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98931
Number of HSP's gapped (non-prelim): 123
length of query: 577
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 554
effective length of database: 17,143,297,704
effective search space: 9497386928016
effective search space used: 9497386928016
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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