ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags1h18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK120250.1| Oryza sativa (japonica cultivar-group) cDNA clon... 504 e-139
2dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 375 e-101
3dbj|AP003543.3| Oryza sativa (japonica cultivar-group) genomic D... 375 e-101
4dbj|AP003507.2| Oryza sativa (japonica cultivar-group) genomic D... 375 e-101
5gb|AC171732.1| Lycopersicon esculentum chromosome 10 clone C10HB... 98 3e-17
6gb|AC146566.7| Medicago truncatula clone mth2-71p5, complete seq... 58 3e-05
7gb|AY596296.1| Haloarcula marismortui ATCC 43049 plasmid pNG700,... 42 1.6
8gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genom... 40 6.2
9gb|AC183324.3| Myotis lucifugus clone CH235-22K20, complete sequ... 40 6.2
10ref|XM_710842.1| Candida albicans SC5314 hypothetical protein (C... 40 6.2
11ref|XM_710792.1| Candida albicans SC5314 hypothetical protein (C... 40 6.2
12gb|BT012663.1| Drosophila melanogaster RE66582 full insert cDNA 40 6.2
13gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.2
14gb|AC119155.6| Mus musculus chromosome 3, clone RP23-43A4, compl... 40 6.2
15gb|AC122323.3| Mus musculus BAC clone RP23-326N21 from chromosom... 40 6.2
16gb|AC115295.4| Mus musculus BAC clone RP23-188O19 from 3, comple... 40 6.2
17gb|AC155171.7| Mus musculus BAC clone RP23-100A10 from chromosom... 40 6.2
18gb|AC113194.8| Homo sapiens chromosome 8, clone RP11-1070A24, co... 40 6.2
19emb|AL662817.11| Mouse DNA sequence from clone RP23-455B19 on ch... 40 6.2
20gb|AC100821.2| Homo sapiens chromosome 8, clone RP11-30L15, comp... 40 6.2
21gb|AC010041.7| Drosophila melanogaster 3L BAC RP98-13D12 (Roswel... 40 6.2
22gb|AC104691.2| Homo sapiens BAC clone RP11-186E11 from 4, comple... 40 6.2
23gb|AC010864.11| Homo sapiens chromosome 10 clone RP11-351D16, co... 40 6.2
24gb|AC158916.4| Mus musculus chromosome 8, clone RP23-18G2, compl... 40 6.2
25gb|AC127352.5| Mus musculus BAC clone RP23-81P4 from chromosome ... 40 6.2
26gb|AC008093.4|AC008093 Drosophila melanogaster, chromosome 3R, r... 40 6.2
27emb|AL114383.1|CNS01BLJ Botrytis cinerea strain T4 cDNA library 40 6.2
28emb|AL113345.1|CNS01ASP Botrytis cinerea strain T4 cDNA library 40 6.2
29emb|AL112266.1|CNS019YQ Botrytis cinerea strain T4 cDNA library 40 6.2
30emb|AL111374.1|CNS0199Y Botrytis cinerea strain T4 cDNA library 40 6.2
31dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
32dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete ge... 40 6.2
33gb|AE003677.3| Drosophila melanogaster chromosome 3R, section 15... 40 6.2
34gb|AE003555.3| Drosophila melanogaster chromosome 3L, section 30... 40 6.2 
>dbj|AK120250.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045F22, full
            insert sequence
          Length = 1968

 Score =  504 bits (254), Expect = e-139
 Identities = 389/434 (89%)
 Strand = Plus / Plus

                                                                        
Query: 12   ctttgaagcgcagtcaagaaatagaatgcagtgtctgcttggaccgtgtgctctcaaagc 71
            ||||||| || || ||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct: 843  ctttgaaacgtagccaagagatagaatgcagtgtctgcctggaccgtgtgctctcaaagc 902

                                                                        
Query: 72   ctactgctgctgaaaggaaatttggactattatctgagtgtgatcatcccttctgtattt 131
            ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 903  ctactgctgctgaaaggaagtttggactcttatctgagtgtgatcatcccttctgtattt 962

                                                                        
Query: 132  catgcataagaaattggcgtggcaactctcctacatctggtatggatgtgaactcagcac 191
            |||| || ||||||||||||  ||| |||||||| ||||| |||||||||||||||||||
Sbjct: 963  catgtattagaaattggcgtaacaattctcctacgtctggaatggatgtgaactcagcac 1022

                                                                        
Query: 192  tgagagcttgcccaatatgccgcaaactttcgtactatgtcattccaagtgttctttggt 251
            |||| ||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1023 tgagggcttgtccaatatgtcgcaaactttcatactatgtcattccaagtgttctttggt 1082

                                                                        
Query: 252  acttctcgaaagaggaaaagttggagatcactgaaaactacaaagcaaagctcaagtcaa 311
            |||| ||||| ||||||||| ||||||| | ||| ||||| ||||| || |||||||| |
Sbjct: 1083 acttttcgaaggaggaaaagctggagattattgacaactataaagccaaactcaagtcta 1142

                                                                        
Query: 312  tagattgcaagtacttcgatttcggaacgggcacttgccccttcgggacaagctgtttct 371
            | || ||||||||||||||||| ||||| || ||||| ||||| ||| ||||||||||||
Sbjct: 1143 ttgactgcaagtacttcgattttggaactggtacttgtccctttgggtcaagctgtttct 1202

                                                                        
Query: 372  acaagcatgcttacagagatggccgtttggaagaagtcgtactgcgacatcttgattgtg 431
            |||||||||| |||||||| || || |||||||| ||| |||||||||||||||||  ||
Sbjct: 1203 acaagcatgcctacagagacggacgcttggaagaggtcatactgcgacatcttgatgctg 1262

                          
Query: 432  atgatggaagtaca 445
            | ||||||||||||
Sbjct: 1263 acgatggaagtaca 1276
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  375 bits (189), Expect = e-101
 Identities = 270/297 (90%)
 Strand = Plus / Plus

                                                                            
Query: 12       ctttgaagcgcagtcaagaaatagaatgcagtgtctgcttggaccgtgtgctctcaaagc 71
                ||||||| || || ||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct: 12197413 ctttgaaacgtagccaagagatagaatgcagtgtctgcctggaccgtgtgctctcaaagc 12197472

                                                                            
Query: 72       ctactgctgctgaaaggaaatttggactattatctgagtgtgatcatcccttctgtattt 131
                ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 12197473 ctactgctgctgaaaggaagtttggactcttatctgagtgtgatcatcccttctgtattt 12197532

                                                                            
Query: 132      catgcataagaaattggcgtggcaactctcctacatctggtatggatgtgaactcagcac 191
                |||| || ||||||||||||  ||| |||||||| ||||| |||||||||||||||||||
Sbjct: 12197533 catgtattagaaattggcgtaacaattctcctacgtctggaatggatgtgaactcagcac 12197592

                                                                            
Query: 192      tgagagcttgcccaatatgccgcaaactttcgtactatgtcattccaagtgttctttggt 251
                |||| ||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 12197593 tgagggcttgtccaatatgtcgcaaactttcatactatgtcattccaagtgttctttggt 12197652

                                                                         
Query: 252      acttctcgaaagaggaaaagttggagatcactgaaaactacaaagcaaagctcaagt 308
                |||| ||||| ||||||||| ||||||| | ||| ||||| ||||| || |||||||
Sbjct: 12197653 acttttcgaaggaggaaaagctggagattattgacaactataaagccaaactcaagt 12197709



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 54/60 (90%)
 Strand = Plus / Plus

                                                                            
Query: 317      tgcaagtacttcgatttcggaacgggcacttgccccttcgggacaagctgtttctacaag 376
                ||||||||||||||||| ||||| || ||||| ||||| ||| |||||||||||||||||
Sbjct: 12197951 tgcaagtacttcgattttggaactggtacttgtccctttgggtcaagctgtttctacaag 12198010



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                            
Query: 375      agcatgcttacagagatggccgtttggaagaagtcgtactgcgacatcttgattgtgatg 434
                ||||||| |||||||| || || |||||||| ||| |||||||||||||||||  ||| |
Sbjct: 12199467 agcatgcctacagagacggacgcttggaagaggtcatactgcgacatcttgatgctgacg 12199526

                           
Query: 435      atggaagtaca 445
                |||||||||||
Sbjct: 12199527 atggaagtaca 12199537
to top
>dbj|AP003543.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0592B08
          Length = 131096

 Score =  375 bits (189), Expect = e-101
 Identities = 270/297 (90%)
 Strand = Plus / Plus

                                                                         
Query: 12    ctttgaagcgcagtcaagaaatagaatgcagtgtctgcttggaccgtgtgctctcaaagc 71
             ||||||| || || ||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct: 34435 ctttgaaacgtagccaagagatagaatgcagtgtctgcctggaccgtgtgctctcaaagc 34494

                                                                         
Query: 72    ctactgctgctgaaaggaaatttggactattatctgagtgtgatcatcccttctgtattt 131
             ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 34495 ctactgctgctgaaaggaagtttggactcttatctgagtgtgatcatcccttctgtattt 34554

                                                                         
Query: 132   catgcataagaaattggcgtggcaactctcctacatctggtatggatgtgaactcagcac 191
             |||| || ||||||||||||  ||| |||||||| ||||| |||||||||||||||||||
Sbjct: 34555 catgtattagaaattggcgtaacaattctcctacgtctggaatggatgtgaactcagcac 34614

                                                                         
Query: 192   tgagagcttgcccaatatgccgcaaactttcgtactatgtcattccaagtgttctttggt 251
             |||| ||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 34615 tgagggcttgtccaatatgtcgcaaactttcatactatgtcattccaagtgttctttggt 34674

                                                                      
Query: 252   acttctcgaaagaggaaaagttggagatcactgaaaactacaaagcaaagctcaagt 308
             |||| ||||| ||||||||| ||||||| | ||| ||||| ||||| || |||||||
Sbjct: 34675 acttttcgaaggaggaaaagctggagattattgacaactataaagccaaactcaagt 34731



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 54/60 (90%)
 Strand = Plus / Plus

                                                                         
Query: 317   tgcaagtacttcgatttcggaacgggcacttgccccttcgggacaagctgtttctacaag 376
             ||||||||||||||||| ||||| || ||||| ||||| ||| |||||||||||||||||
Sbjct: 34973 tgcaagtacttcgattttggaactggtacttgtccctttgggtcaagctgtttctacaag 35032



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                         
Query: 375   agcatgcttacagagatggccgtttggaagaagtcgtactgcgacatcttgattgtgatg 434
             ||||||| |||||||| || || |||||||| ||| |||||||||||||||||  ||| |
Sbjct: 36489 agcatgcctacagagacggacgcttggaagaggtcatactgcgacatcttgatgctgacg 36548

                        
Query: 435   atggaagtaca 445
             |||||||||||
Sbjct: 36549 atggaagtaca 36559
to top
>dbj|AP003507.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0468A12
          Length = 143018

 Score =  375 bits (189), Expect = e-101
 Identities = 270/297 (90%)
 Strand = Plus / Plus

                                                                          
Query: 12     ctttgaagcgcagtcaagaaatagaatgcagtgtctgcttggaccgtgtgctctcaaagc 71
              ||||||| || || ||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct: 140202 ctttgaaacgtagccaagagatagaatgcagtgtctgcctggaccgtgtgctctcaaagc 140261

                                                                          
Query: 72     ctactgctgctgaaaggaaatttggactattatctgagtgtgatcatcccttctgtattt 131
              ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 140262 ctactgctgctgaaaggaagtttggactcttatctgagtgtgatcatcccttctgtattt 140321

                                                                          
Query: 132    catgcataagaaattggcgtggcaactctcctacatctggtatggatgtgaactcagcac 191
              |||| || ||||||||||||  ||| |||||||| ||||| |||||||||||||||||||
Sbjct: 140322 catgtattagaaattggcgtaacaattctcctacgtctggaatggatgtgaactcagcac 140381

                                                                          
Query: 192    tgagagcttgcccaatatgccgcaaactttcgtactatgtcattccaagtgttctttggt 251
              |||| ||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 140382 tgagggcttgtccaatatgtcgcaaactttcatactatgtcattccaagtgttctttggt 140441

                                                                       
Query: 252    acttctcgaaagaggaaaagttggagatcactgaaaactacaaagcaaagctcaagt 308
              |||| ||||| ||||||||| ||||||| | ||| ||||| ||||| || |||||||
Sbjct: 140442 acttttcgaaggaggaaaagctggagattattgacaactataaagccaaactcaagt 140498



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 54/60 (90%)
 Strand = Plus / Plus

                                                                          
Query: 317    tgcaagtacttcgatttcggaacgggcacttgccccttcgggacaagctgtttctacaag 376
              ||||||||||||||||| ||||| || ||||| ||||| ||| |||||||||||||||||
Sbjct: 140740 tgcaagtacttcgattttggaactggtacttgtccctttgggtcaagctgtttctacaag 140799



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                          
Query: 375    agcatgcttacagagatggccgtttggaagaagtcgtactgcgacatcttgattgtgatg 434
              ||||||| |||||||| || || |||||||| ||| |||||||||||||||||  ||| |
Sbjct: 142256 agcatgcctacagagacggacgcttggaagaggtcatactgcgacatcttgatgctgacg 142315

                         
Query: 435    atggaagtaca 445
              |||||||||||
Sbjct: 142316 atggaagtaca 142326
to top
>gb|AC171732.1| Lycopersicon esculentum chromosome 10 clone C10HBa0111D09, complete
            sequence
          Length = 148613

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 195/243 (80%), Gaps = 3/243 (1%)
 Strand = Plus / Minus

                                                                        
Query: 14   ttgaagcgcagtcaagaaatagaatgcagtgtctgcttggaccgtgtgctctcaaagcct 73
            |||||||||||||||||||||||||||||||| ||| | || || || || || ||| | 
Sbjct: 5611 ttgaagcgcagtcaagaaatagaatgcagtgtatgccttgaacgcgttctttccaagtca 5552

                                                                        
Query: 74   actgctgctgaaaggaaatttggactattatctgagtgtgatcatcccttctgtatttca 133
            || || ||||| ||||| |||||  |  | ||||||||||||||||| || ||| | || 
Sbjct: 5551 acagcagctgagaggaagtttgggatcctttctgagtgtgatcatccattttgtgtatcg 5492

                                                                        
Query: 134  tgcataagaaattggcgtggcaactctcctacatctggtatggatgtgaactcagcactg 193
            || ||||| |||||||||||||    | || | ||||| |||||||| || || ||||||
Sbjct: 5491 tgtataaggaattggcgtggca---gttcttcctctgggatggatgttaattctgcactg 5435

                                                                        
Query: 194  agagcttgcccaatatgccgcaaactttcgtactatgtcattccaagtgttctttggtac 253
            || || || || |||||| | || ||||| || | |||||||||||||||| ||||||||
Sbjct: 5434 agggcgtgtcccatatgcagaaagctttcatattttgtcattccaagtgttatttggtac 5375

               
Query: 254  ttc 256
            |||
Sbjct: 5374 ttc 5372
to top
>gb|AC146566.7| Medicago truncatula clone mth2-71p5, complete sequence
          Length = 115996

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 104/129 (80%)
 Strand = Plus / Plus

                                                                         
Query: 23    agtcaagaaatagaatgcagtgtctgcttggaccgtgtgctctcaaagcctactgctgct 82
             ||||||||||| ||||||||||| ||| | || ||||| || ||||||||||| || |||
Sbjct: 10053 agtcaagaaattgaatgcagtgtttgccttgagcgtgttctttcaaagcctacggcagct 10112

                                                                         
Query: 83    gaaaggaaatttggactattatctgagtgtgatcatcccttctgtatttcatgcataaga 142
             ||  | || ||||| ||  ||||||| || |||||||| |||||  | || || || |||
Sbjct: 10113 gagcgtaagtttggtctgctatctgaatgcgatcatccgttctgcgtatcgtgtattaga 10172

                      
Query: 143   aattggcgt 151
             |||||||||
Sbjct: 10173 aattggcgt 10181
to top
>gb|AY596296.1| Haloarcula marismortui ATCC 43049 plasmid pNG700, complete sequence
          Length = 410554

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 317    tgcaagtacttcgatttcgga 337
              |||||||||||||||||||||
Sbjct: 273380 tgcaagtacttcgatttcgga 273360
to top
>gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete
              sequence
          Length = 138345

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 251    tacttctcgaaagaggaaaa 270
              ||||||||||||||||||||
Sbjct: 124206 tacttctcgaaagaggaaaa 124225
to top
>gb|AC183324.3| Myotis lucifugus clone CH235-22K20, complete sequence
          Length = 198971

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 281    actgaaaactacaaagcaaa 300
              ||||||||||||||||||||
Sbjct: 159399 actgaaaactacaaagcaaa 159418
to top
>ref|XM_710842.1| Candida albicans SC5314 hypothetical protein (CaO19_8081), mRNA
          Length = 2478

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 421 tcttgattgtgatgatggaa 440
           ||||||||||||||||||||
Sbjct: 284 tcttgattgtgatgatggaa 265
to top
>ref|XM_710792.1| Candida albicans SC5314 hypothetical protein (CaO19_451), mRNA
          Length = 2478

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 421 tcttgattgtgatgatggaa 440
           ||||||||||||||||||||
Sbjct: 284 tcttgattgtgatgatggaa 265
to top
>gb|BT012663.1| Drosophila melanogaster RE66582 full insert cDNA
          Length = 4884

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 243  ttctttggtacttctcgaaa 262
            ||||||||||||||||||||
Sbjct: 4308 ttctttggtacttctcgaaa 4327
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 251      tacttctcgaaagaggaaaa 270
                ||||||||||||||||||||
Sbjct: 27423999 tacttctcgaaagaggaaaa 27424018
to top
>gb|AC119155.6| Mus musculus chromosome 3, clone RP23-43A4, complete sequence
          Length = 147451

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 303    tcaagtcaatagattgcaag 322
              ||||||||||||||||||||
Sbjct: 114921 tcaagtcaatagattgcaag 114940
to top
>gb|AC122323.3| Mus musculus BAC clone RP23-326N21 from chromosome 8, complete sequence
          Length = 212949

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 259   gaaagaggaaaagttggagatcac 282
             |||||||||| |||||||||||||
Sbjct: 24731 gaaagaggaagagttggagatcac 24754
to top
>gb|AC115295.4| Mus musculus BAC clone RP23-188O19 from 3, complete sequence
          Length = 202201

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 303   tcaagtcaatagattgcaag 322
             ||||||||||||||||||||
Sbjct: 26144 tcaagtcaatagattgcaag 26163
to top
>gb|AC155171.7| Mus musculus BAC clone RP23-100A10 from chromosome 7, complete sequence
          Length = 193027

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                         
Query: 105   ctgagtgtgatcatcc-cttctgtattt 131
             |||||||||||||||| |||||||||||
Sbjct: 55087 ctgagtgtgatcatccacttctgtattt 55114



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                         
Query: 105   ctgagtgtgatcatcc-cttctgtattt 131
             |||||||||||||||| |||||||||||
Sbjct: 52887 ctgagtgtgatcatccacttctgtattt 52914
to top
>gb|AC113194.8| Homo sapiens chromosome 8, clone RP11-1070A24, complete sequence
          Length = 166015

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 419   catcttgattgtgatgatgg 438
             ||||||||||||||||||||
Sbjct: 25510 catcttgattgtgatgatgg 25491
to top
>emb|AL662817.11| Mouse DNA sequence from clone RP23-455B19 on chromosome 11 Contains the
             gene for a novel protein similar to rat galactose binding
             soluble lectin 5 Lgals5, a novel gene, a ribosomal protein
             L12 (Rpl12) pseudogene and a CpG island, complete sequence
          Length = 145667

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 279   tcactgaaaactacaaagcaaagc 302
             ||||||||||||||||||| ||||
Sbjct: 43501 tcactgaaaactacaaagctaagc 43478
to top
>gb|AC100821.2| Homo sapiens chromosome 8, clone RP11-30L15, complete sequence
          Length = 183976

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 419    catcttgattgtgatgatgg 438
              ||||||||||||||||||||
Sbjct: 175184 catcttgattgtgatgatgg 175165
to top
>gb|AC010041.7| Drosophila melanogaster 3L BAC RP98-13D12 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 174712

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 243   ttctttggtacttctcgaaa 262
             ||||||||||||||||||||
Sbjct: 71378 ttctttggtacttctcgaaa 71359
to top
>gb|AC104691.2| Homo sapiens BAC clone RP11-186E11 from 4, complete sequence
          Length = 118631

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 282   ctgaaaactacaaagcaaag 301
             ||||||||||||||||||||
Sbjct: 62099 ctgaaaactacaaagcaaag 62118
to top
>gb|AC010864.11| Homo sapiens chromosome 10 clone RP11-351D16, complete sequence
          Length = 205794

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 279   tcactgaaaactacaaagca 298
             ||||||||||||||||||||
Sbjct: 17914 tcactgaaaactacaaagca 17933
to top
>gb|AC158916.4| Mus musculus chromosome 8, clone RP23-18G2, complete sequence
          Length = 206384

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 69     agcctactgctgctgaaagg 88
              ||||||||||||||||||||
Sbjct: 176704 agcctactgctgctgaaagg 176685
to top
>gb|AC127352.5| Mus musculus BAC clone RP23-81P4 from chromosome 7, complete sequence
          Length = 196031

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                         
Query: 105   ctgagtgtgatcatcc-cttctgtattt 131
             |||||||||||||||| |||||||||||
Sbjct: 15064 ctgagtgtgatcatccacttctgtattt 15091



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                         
Query: 105   ctgagtgtgatcatcc-cttctgtattt 131
             |||||||||||||||| |||||||||||
Sbjct: 12864 ctgagtgtgatcatccacttctgtattt 12891
to top
>gb|AC008093.4|AC008093 Drosophila melanogaster, chromosome 3R, region 84F-84F, BAC clone
              BACR07M14, complete sequence
          Length = 181950

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 292    caaagcaaagctcaagtcaa 311
              ||||||||||||||||||||
Sbjct: 163411 caaagcaaagctcaagtcaa 163430
to top
>emb|AL114383.1|CNS01BLJ Botrytis cinerea strain T4 cDNA library
          Length = 540

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 417 gacatcttgattgtgatgat 436
           ||||||||||||||||||||
Sbjct: 25  gacatcttgattgtgatgat 6
to top
>emb|AL113345.1|CNS01ASP Botrytis cinerea strain T4 cDNA library
          Length = 540

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 417 gacatcttgattgtgatgat 436
           ||||||||||||||||||||
Sbjct: 24  gacatcttgattgtgatgat 5
to top
>emb|AL112266.1|CNS019YQ Botrytis cinerea strain T4 cDNA library
          Length = 540

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 417 gacatcttgattgtgatgat 436
           ||||||||||||||||||||
Sbjct: 24  gacatcttgattgtgatgat 5
to top
>emb|AL111374.1|CNS0199Y Botrytis cinerea strain T4 cDNA library
          Length = 600

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 417 gacatcttgattgtgatgat 436
           ||||||||||||||||||||
Sbjct: 54  gacatcttgattgtgatgat 35
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 251      tacttctcgaaagaggaaaa 270
                ||||||||||||||||||||
Sbjct: 27515322 tacttctcgaaagaggaaaa 27515341
to top
>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome
          Length = 3544776

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 258    cgaaagaggaaaagttggag 277
              ||||||||||||||||||||
Sbjct: 706794 cgaaagaggaaaagttggag 706813
to top
>gb|AE003677.3| Drosophila melanogaster chromosome 3R, section 15 of 118 of the complete
              sequence
          Length = 228314

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 292    caaagcaaagctcaagtcaa 311
              ||||||||||||||||||||
Sbjct: 141806 caaagcaaagctcaagtcaa 141825
to top
>gb|AE003555.3| Drosophila melanogaster chromosome 3L, section 30 of 83 of the complete
              sequence
          Length = 283781

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 243    ttctttggtacttctcgaaa 262
              ||||||||||||||||||||
Sbjct: 100396 ttctttggtacttctcgaaa 100377


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,052,005
Number of Sequences: 3902068
Number of extensions: 4052005
Number of successful extensions: 71732
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 71623
Number of HSP's gapped (non-prelim): 111
length of query: 461
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 439
effective length of database: 17,147,199,772
effective search space: 7527620699908
effective search space used: 7527620699908
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top