ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bags1h10 |
|---|---|
| Clone Library Name | barley_pub |
>gb|M55604.1|WHTUBA1 T.aestivum ubiquitin activating enzyme E1 (UBA1) gene, complete cds Length = 3586 Score = 630 bits (318), Expect = e-177 Identities = 448/479 (93%), Gaps = 10/479 (2%) Strand = Plus / Plus Query: 22 tttccaaaacactgccatcagggttccacatgnaacccgnancagtttgnagnaaggtat 81 |||||||||||||||||||||||||||||||| ||||| ||||||| || |||| || Sbjct: 2689 tttccaaaacactgccatcagggttccacatg-aacccaatacagtttg-ag-aagg-at 2744 Query: 82 gatgacaccaacttgccatatggctgtgatagctggttttgccaacatgnagggcaaggn 141 |||||||| ||||| |||||||| ||||||||||||||||||||||||| ||||||||| Sbjct: 2745 gatgacacaaactt-ccatatggatgtgatagctggttttgccaacatg-agggcaagg- 2801 Query: 142 aactacagcattccggnaagtgggacaagctaaaggccaagtttatagccggcaggnatc 201 |||||||||||||| | |||||| ||||||| |||||||||||||||||||||||| ||| Sbjct: 2802 aactacagcattcctg-aagtgg-acaagctcaaggccaagtttatagccggcagg-atc 2858 Query: 202 atcccagctatcgccacctcgactgcgatggccactggcctcgtgtgcctcgagctttac 261 |||||||||||||||||||| || |||||||||||||||||||| ||||| ||||||||| Sbjct: 2859 atcccagctatcgccacctccaccgcgatggccactggcctcgtctgccttgagctttac 2918 Query: 262 aaagcccttgctggtggacacaaggtcgaagactaccgcaacacgtttgcaaacctcgcg 321 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 2919 aaagcccttgctggtggacacaaggttgaagactaccgcaacacgtttgcaaacctcgct 2978 Query: 322 atcccactgttctccattgctgaaccggttccacccaagaccatcaagcaccaggagctg 381 ||||| || ||||||||||||||||| |||||||||||||||||||||||||||||| || Sbjct: 2979 atccctctcttctccattgctgaaccagttccacccaagaccatcaagcaccaggagttg 3038 Query: 382 tcgtggacggtctgggaccggtggactgtaacgggcaacatcacgctgagggagctcctg 441 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 3039 tcgtggacggtctgggaccggtggactgtgacgggcaacatcacgctgagggagctcctg 3098 Query: 442 gagtggctcaaggagaagggtctgaacgcttacagcatatnctgtggcacctcgctgct 500 |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 3099 gagtggctcaaggagaagggcctgaacgcttacagcatatcctgtggcacctcgctgct 3157
>gb|M90663.1|WHTE1A Wheat ubiquitin activating enzyme (E1) mRNA, complete cds Length = 3695 Score = 630 bits (318), Expect = e-177 Identities = 448/479 (93%), Gaps = 10/479 (2%) Strand = Plus / Plus Query: 22 tttccaaaacactgccatcagggttccacatgnaacccgnancagtttgnagnaaggtat 81 |||||||||||||||||||||||||||||||| ||||| ||||||| || |||| || Sbjct: 2784 tttccaaaacactgccatcagggttccacatg-aacccaatacagtttg-ag-aagg-at 2839 Query: 82 gatgacaccaacttgccatatggctgtgatagctggttttgccaacatgnagggcaaggn 141 |||||||| ||||| |||||||| ||||||||||||||||||||||||| ||||||||| Sbjct: 2840 gatgacacaaactt-ccatatggatgtgatagctggttttgccaacatg-agggcaagg- 2896 Query: 142 aactacagcattccggnaagtgggacaagctaaaggccaagtttatagccggcaggnatc 201 |||||||||||||| | |||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 2897 aactacagcattcctg-aagtgg-acaagctaaaggccaagtttatagccggcagg-atc 2953 Query: 202 atcccagctatcgccacctcgactgcgatggccactggcctcgtgtgcctcgagctttac 261 |||||||||||||||||||| || ||||||||||||||||| || ||||| ||||||||| Sbjct: 2954 atcccagctatcgccacctccaccgcgatggccactggccttgtctgccttgagctttac 3013 Query: 262 aaagcccttgctggtggacacaaggtcgaagactaccgcaacacgtttgcaaacctcgcg 321 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 3014 aaagcccttgctggtggacacaaggtcgaagactaccgcaacacgtttgcaaaccttgcg 3073 Query: 322 atcccactgttctccattgctgaaccggttccacccaagaccatcaagcaccaggagctg 381 ||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 3074 atccctctcttctccattgctgaaccagttccacccaagaccatcaagcaccaggagctg 3133 Query: 382 tcgtggacggtctgggaccggtggactgtaacgggcaacatcacgctgagggagctcctg 441 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 3134 tcgtggacggtctgggaccggtggactgtgacaggcaacatcacgctgagggagctcctg 3193 Query: 442 gagtggctcaaggagaagggtctgaacgcttacagcatatnctgtggcacctcgctgct 500 |||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||| Sbjct: 3194 gagtggctcaaggagaagggcctgaacgcttacagcatatcctgtggcacctctctgct 3252
>gb|BT019213.1| Zea mays clone Contig886.F mRNA sequence Length = 836 Score = 283 bits (143), Expect = 3e-73 Identities = 262/302 (86%) Strand = Plus / Plus Query: 199 atcatcccagctatcgccacctcgactgcgatggccactggcctcgtgtgcctcgagctt 258 |||||||| || ||||||||||| |||||||||||||| ||||| || ||||| |||||| Sbjct: 301 atcatcccggccatcgccacctcaactgcgatggccaccggccttgtctgcctggagctt 360 Query: 259 tacaaagcccttgctggtggacacaaggtcgaagactaccgcaacacgtttgcaaacctc 318 ||||| | |||||||||||| |||||||| ||||||||||| ||||| ||||| |||||| Sbjct: 361 tacaaggtccttgctggtgggcacaaggttgaagactaccggaacacatttgcgaacctc 420 Query: 319 gcgatcccactgttctccattgctgaaccggttccacccaagaccatcaagcaccaggag 378 || ||||| || |||||||| || || || || || ||||||||||| |||||||| || Sbjct: 421 gcaatccccctcttctccatggcggagcctgtgccgcccaagaccatgaagcaccaagac 480 Query: 379 ctgtcgtggacggtctgggaccggtggactgtaacgggcaacatcacgctgagggagctc 438 |||| ||||| || |||||||||||||| ||||| |||||||| ||||||||||||||| Sbjct: 481 atgtcctggaccgtgtgggaccggtggaccgtaactggcaacatgacgctgagggagctc 540 Query: 439 ctggagtggctcaaggagaagggtctgaacgcttacagcatatnctgtggcacctcgctg 498 ||||||||||| ||||||||||| ||||||| |||||||||| ||| || ||||||||| Sbjct: 541 ctggagtggctgaaggagaaggggttgaacgcgtacagcatatcctgcgggacctcgctg 600 Query: 499 ct 500 || Sbjct: 601 ct 602
>gb|AY103697.1| Zea mays PCO090876 mRNA sequence Length = 1314 Score = 276 bits (139), Expect = 7e-71 Identities = 247/283 (87%) Strand = Plus / Plus Query: 199 atcatcccagctatcgccacctcgactgcgatggccactggcctcgtgtgcctcgagctt 258 ||||||||||| ||||||||||| ||||| |||||||| ||||| || ||||| |||||| Sbjct: 782 atcatcccagccatcgccacctcaactgcaatggccaccggccttgtctgcctggagctt 841 Query: 259 tacaaagcccttgctggtggacacaaggtcgaagactaccgcaacacgtttgcaaacctc 318 ||||||| |||||||||||| |||||||| ||||||||||| ||||| ||||| ||||| Sbjct: 842 tacaaagtccttgctggtgggcacaaggttgaagactaccggaacacatttgcgaacctg 901 Query: 319 gcgatcccactgttctccattgctgaaccggttccacccaagaccatcaagcaccaggag 378 |||||||| || |||||||| || || || || ||||||||||||||||||||||| || Sbjct: 902 gcgatccccctcttctccatggcggagcctgtgccacccaagaccatcaagcaccaagac 961 Query: 379 ctgtcgtggacggtctgggaccggtggactgtaacgggcaacatcacgctgagggagctc 438 |||| ||||| || |||||||| ||||| ||||| |||||||| ||||||||||||||| Sbjct: 962 atgtcctggaccgtgtgggaccgctggacggtaactggcaacatgacgctgagggagctc 1021 Query: 439 ctggagtggctcaaggagaagggtctgaacgcttacagcatat 481 ||||||||||| ||||||||||| |||| || |||||||||| Sbjct: 1022 ctggagtggctgaaggagaagggcttgaatgcgtacagcatat 1064
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 268 bits (135), Expect = 2e-68 Identities = 355/421 (84%), Gaps = 6/421 (1%) Strand = Plus / Minus Query: 80 atgatgacaccaacttgccatatggctgtgatagctggttttgccaacatgnagggcaag 139 ||||||||||||| || |||||||| ||||||||||||||||| |||||| ||||||| Sbjct: 312747 atgatgacaccaa-ttaccatatggacgtgatagctggttttgctaacatgc-gggcaag 312690 Query: 140 gnaactacagcattccggnaagtgggacaagctaaaggccaagtttatagccggcaggna 199 | ||||| |||||||| | |||||| ||||||| ||||| ||||| ||||| |||||| | Sbjct: 312689 g-aactatagcattcctg-aagtgg-acaagctgaaggcgaagttcatagctggcagg-a 312634 Query: 200 tcatcccagctatcgccacctcgactgcgatggccactggcctcgtgtgcctcgagcttt 259 ||||||| || || |||||||| ||||||||||| ||||| || || ||| | || || | Sbjct: 312633 tcatccctgccattgccacctcaactgcgatggctactggtcttgtctgcttggaactgt 312574 Query: 260 acaaagcccttgctggtggacacaaggtcgaagactaccgcaacacgtttgcaaacctcg 319 |||| | || | |||||| |||||||| ||||||||| | ||||| ||||||||||| | Sbjct: 312573 acaaggtactcggtggtgggcacaaggttgaagactacaggaacacatttgcaaaccttg 312514 Query: 320 cgatcccactgttctccattgctgaaccggttccacccaagaccatcaagcaccaggagc 379 | ||||| || ||||| || ||||| ||||| || ||||||||||||||||||||||| Sbjct: 312513 caatccccctcttctctatggctgagccggtccctcccaagaccatcaagcaccaggaca 312454 Query: 380 tgtcgtggacggtctgggaccggtggactgtaacgggcaacatcacgctgagggagctcc 439 || | ||||| || |||||||| ||||| |||| ||||||||||||||||||||||| | Sbjct: 312453 tggcctggactgtttgggaccgctggaccataactggcaacatcacgctgagggagcttc 312394 Query: 440 tggagtggctcaaggagaagggtctgaacgcttacagcatatnctgtggcacctcgctgc 499 |||| ||||||||||||||||| ||||| || |||||||||| || ||||||||||||| Sbjct: 312393 tggactggctcaaggagaagggcctgaatgcatacagcatatcttgcggcacctcgctgc 312334 Query: 500 t 500 | Sbjct: 312333 t 312333
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 268 bits (135), Expect = 2e-68 Identities = 355/421 (84%), Gaps = 6/421 (1%) Strand = Plus / Minus Query: 80 atgatgacaccaacttgccatatggctgtgatagctggttttgccaacatgnagggcaag 139 ||||||||||||| || |||||||| ||||||||||||||||| |||||| ||||||| Sbjct: 295645 atgatgacaccaa-ttaccatatggacgtgatagctggttttgctaacatgc-gggcaag 295588 Query: 140 gnaactacagcattccggnaagtgggacaagctaaaggccaagtttatagccggcaggna 199 | ||||| |||||||| | |||||| ||||||| ||||| ||||| ||||| |||||| | Sbjct: 295587 g-aactatagcattcctg-aagtgg-acaagctgaaggcgaagttcatagctggcagg-a 295532 Query: 200 tcatcccagctatcgccacctcgactgcgatggccactggcctcgtgtgcctcgagcttt 259 ||||||| || || |||||||| ||||||||||| ||||| || || ||| | || || | Sbjct: 295531 tcatccctgccattgccacctcaactgcgatggctactggtcttgtctgcttggaactgt 295472 Query: 260 acaaagcccttgctggtggacacaaggtcgaagactaccgcaacacgtttgcaaacctcg 319 |||| | || | |||||| |||||||| ||||||||| | ||||| ||||||||||| | Sbjct: 295471 acaaggtactcggtggtgggcacaaggttgaagactacaggaacacatttgcaaaccttg 295412 Query: 320 cgatcccactgttctccattgctgaaccggttccacccaagaccatcaagcaccaggagc 379 | ||||| || ||||| || ||||| ||||| || ||||||||||||||||||||||| Sbjct: 295411 caatccccctcttctctatggctgagccggtccctcccaagaccatcaagcaccaggaca 295352 Query: 380 tgtcgtggacggtctgggaccggtggactgtaacgggcaacatcacgctgagggagctcc 439 || | ||||| || |||||||| ||||| |||| ||||||||||||||||||||||| | Sbjct: 295351 tggcctggactgtttgggaccgctggaccataactggcaacatcacgctgagggagcttc 295292 Query: 440 tggagtggctcaaggagaagggtctgaacgcttacagcatatnctgtggcacctcgctgc 499 |||| ||||||||||||||||| ||||| || |||||||||| || ||||||||||||| Sbjct: 295291 tggactggctcaaggagaagggcctgaatgcatacagcatatcttgcggcacctcgctgc 295232 Query: 500 t 500 | Sbjct: 295231 t 295231
>dbj|AK111781.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083B12, full insert sequence Length = 3724 Score = 268 bits (135), Expect = 2e-68 Identities = 355/421 (84%), Gaps = 6/421 (1%) Strand = Plus / Plus Query: 80 atgatgacaccaacttgccatatggctgtgatagctggttttgccaacatgnagggcaag 139 ||||||||||||| || |||||||| ||||||||||||||||| |||||| ||||||| Sbjct: 2872 atgatgacaccaa-ttaccatatggacgtgatagctggttttgctaacatgc-gggcaag 2929 Query: 140 gnaactacagcattccggnaagtgggacaagctaaaggccaagtttatagccggcaggna 199 | ||||| |||||||| | |||||| ||||||| ||||| ||||| ||||| |||||| | Sbjct: 2930 g-aactatagcattcctg-aagtgg-acaagctgaaggcgaagttcatagctggcagg-a 2985 Query: 200 tcatcccagctatcgccacctcgactgcgatggccactggcctcgtgtgcctcgagcttt 259 ||||||| || || |||||||| ||||||||||| ||||| || || ||| | || || | Sbjct: 2986 tcatccctgccattgccacctcaactgcgatggctactggtcttgtctgcttggaactgt 3045 Query: 260 acaaagcccttgctggtggacacaaggtcgaagactaccgcaacacgtttgcaaacctcg 319 |||| | || | |||||| |||||||| ||||||||| | ||||| ||||||||||| | Sbjct: 3046 acaaggtactcggtggtgggcacaaggttgaagactacaggaacacatttgcaaaccttg 3105 Query: 320 cgatcccactgttctccattgctgaaccggttccacccaagaccatcaagcaccaggagc 379 | ||||| || ||||| || ||||| ||||| || ||||||||||||||||||||||| Sbjct: 3106 caatccccctcttctctatggctgagccggtccctcccaagaccatcaagcaccaggaca 3165 Query: 380 tgtcgtggacggtctgggaccggtggactgtaacgggcaacatcacgctgagggagctcc 439 || | ||||| || |||||||| ||||| |||| ||||||||||||||||||||||| | Sbjct: 3166 tggcctggactgtttgggaccgctggaccataactggcaacatcacgctgagggagcttc 3225 Query: 440 tggagtggctcaaggagaagggtctgaacgcttacagcatatnctgtggcacctcgctgc 499 |||| ||||||||||||||||| ||||| || |||||||||| || ||||||||||||| Sbjct: 3226 tggactggctcaaggagaagggcctgaatgcatacagcatatcttgcggcacctcgctgc 3285 Query: 500 t 500 | Sbjct: 3286 t 3286
>dbj|AK111741.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049I12, full insert sequence Length = 1533 Score = 268 bits (135), Expect = 2e-68 Identities = 355/421 (84%), Gaps = 6/421 (1%) Strand = Plus / Plus Query: 80 atgatgacaccaacttgccatatggctgtgatagctggttttgccaacatgnagggcaag 139 ||||||||||||| || |||||||| ||||||||||||||||| |||||| ||||||| Sbjct: 765 atgatgacaccaa-ttaccatatggacgtgatagctggttttgctaacatgc-gggcaag 822 Query: 140 gnaactacagcattccggnaagtgggacaagctaaaggccaagtttatagccggcaggna 199 | ||||| |||||||| | |||||| ||||||| ||||| ||||| ||||| |||||| | Sbjct: 823 g-aactatagcattcctg-aagtgg-acaagctgaaggcgaagttcatagctggcagg-a 878 Query: 200 tcatcccagctatcgccacctcgactgcgatggccactggcctcgtgtgcctcgagcttt 259 ||||||| || || |||||||| ||||||||||| ||||| || || ||| | || || | Sbjct: 879 tcatccctgccattgccacctcaactgcgatggctactggtcttgtctgcttggaactgt 938 Query: 260 acaaagcccttgctggtggacacaaggtcgaagactaccgcaacacgtttgcaaacctcg 319 |||| | || | |||||| |||||||| ||||||||| | ||||| ||||||||||| | Sbjct: 939 acaaggtactcggtggtgggcacaaggttgaagactacaggaacacatttgcaaaccttg 998 Query: 320 cgatcccactgttctccattgctgaaccggttccacccaagaccatcaagcaccaggagc 379 | ||||| || ||||| || ||||| ||||| || ||||||||||||||||||||||| Sbjct: 999 caatccccctcttctctatggctgagccggtccctcccaagaccatcaagcaccaggaca 1058 Query: 380 tgtcgtggacggtctgggaccggtggactgtaacgggcaacatcacgctgagggagctcc 439 || | ||||| || |||||||| ||||| |||| ||||||||||||||||||||||| | Sbjct: 1059 tggcctggactgtttgggaccgctggaccataactggcaacatcacgctgagggagcttc 1118 Query: 440 tggagtggctcaaggagaagggtctgaacgcttacagcatatnctgtggcacctcgctgc 499 |||| ||||||||||||||||| ||||| || |||||||||| || ||||||||||||| Sbjct: 1119 tggactggctcaaggagaagggcctgaatgcatacagcatatcttgcggcacctcgctgc 1178 Query: 500 t 500 | Sbjct: 1179 t 1179
>dbj|AK104898.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-C03, full insert sequence Length = 1510 Score = 268 bits (135), Expect = 2e-68 Identities = 355/421 (84%), Gaps = 6/421 (1%) Strand = Plus / Plus Query: 80 atgatgacaccaacttgccatatggctgtgatagctggttttgccaacatgnagggcaag 139 ||||||||||||| || |||||||| ||||||||||||||||| |||||| ||||||| Sbjct: 656 atgatgacaccaa-ttaccatatggacgtgatagctggttttgctaacatgc-gggcaag 713 Query: 140 gnaactacagcattccggnaagtgggacaagctaaaggccaagtttatagccggcaggna 199 | ||||| |||||||| | |||||| ||||||| ||||| ||||| ||||| |||||| | Sbjct: 714 g-aactatagcattcctg-aagtgg-acaagctgaaggcgaagttcatagctggcagg-a 769 Query: 200 tcatcccagctatcgccacctcgactgcgatggccactggcctcgtgtgcctcgagcttt 259 ||||||| || || |||||||| ||||||||||| ||||| || || ||| | || || | Sbjct: 770 tcatccctgccattgccacctcaactgcgatggctactggtcttgtctgcttggaactgt 829 Query: 260 acaaagcccttgctggtggacacaaggtcgaagactaccgcaacacgtttgcaaacctcg 319 |||| | || | |||||| |||||||| ||||||||| | ||||| ||||||||||| | Sbjct: 830 acaaggtactcggtggtgggcacaaggttgaagactacaggaacacatttgcaaaccttg 889 Query: 320 cgatcccactgttctccattgctgaaccggttccacccaagaccatcaagcaccaggagc 379 | ||||| || ||||| || ||||| ||||| || ||||||||||||||||||||||| Sbjct: 890 caatccccctcttctctatggctgagccggtccctcccaagaccatcaagcaccaggaca 949 Query: 380 tgtcgtggacggtctgggaccggtggactgtaacgggcaacatcacgctgagggagctcc 439 || | ||||| || |||||||| ||||| |||| ||||||||||||||||||||||| | Sbjct: 950 tggcctggactgtttgggaccgctggaccataactggcaacatcacgctgagggagcttc 1009 Query: 440 tggagtggctcaaggagaagggtctgaacgcttacagcatatnctgtggcacctcgctgc 499 |||| ||||||||||||||||| ||||| || |||||||||| || ||||||||||||| Sbjct: 1010 tggactggctcaaggagaagggcctgaatgcatacagcatatcttgcggcacctcgctgc 1069 Query: 500 t 500 | Sbjct: 1070 t 1070
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 268 bits (135), Expect = 2e-68 Identities = 355/421 (84%), Gaps = 6/421 (1%) Strand = Plus / Minus Query: 80 atgatgacaccaacttgccatatggctgtgatagctggttttgccaacatgnagggcaag 139 ||||||||||||| || |||||||| ||||||||||||||||| |||||| ||||||| Sbjct: 295645 atgatgacaccaa-ttaccatatggacgtgatagctggttttgctaacatgc-gggcaag 295588 Query: 140 gnaactacagcattccggnaagtgggacaagctaaaggccaagtttatagccggcaggna 199 | ||||| |||||||| | |||||| ||||||| ||||| ||||| ||||| |||||| | Sbjct: 295587 g-aactatagcattcctg-aagtgg-acaagctgaaggcgaagttcatagctggcagg-a 295532 Query: 200 tcatcccagctatcgccacctcgactgcgatggccactggcctcgtgtgcctcgagcttt 259 ||||||| || || |||||||| ||||||||||| ||||| || || ||| | || || | Sbjct: 295531 tcatccctgccattgccacctcaactgcgatggctactggtcttgtctgcttggaactgt 295472 Query: 260 acaaagcccttgctggtggacacaaggtcgaagactaccgcaacacgtttgcaaacctcg 319 |||| | || | |||||| |||||||| ||||||||| | ||||| ||||||||||| | Sbjct: 295471 acaaggtactcggtggtgggcacaaggttgaagactacaggaacacatttgcaaaccttg 295412 Query: 320 cgatcccactgttctccattgctgaaccggttccacccaagaccatcaagcaccaggagc 379 | ||||| || ||||| || ||||| ||||| || ||||||||||||||||||||||| Sbjct: 295411 caatccccctcttctctatggctgagccggtccctcccaagaccatcaagcaccaggaca 295352 Query: 380 tgtcgtggacggtctgggaccggtggactgtaacgggcaacatcacgctgagggagctcc 439 || | ||||| || |||||||| ||||| |||| ||||||||||||||||||||||| | Sbjct: 295351 tggcctggactgtttgggaccgctggaccataactggcaacatcacgctgagggagcttc 295292 Query: 440 tggagtggctcaaggagaagggtctgaacgcttacagcatatnctgtggcacctcgctgc 499 |||| ||||||||||||||||| ||||| || |||||||||| || ||||||||||||| Sbjct: 295291 tggactggctcaaggagaagggcctgaatgcatacagcatatcttgcggcacctcgctgc 295232 Query: 500 t 500 | Sbjct: 295231 t 295231
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 268 bits (135), Expect = 2e-68 Identities = 355/421 (84%), Gaps = 6/421 (1%) Strand = Plus / Minus Query: 80 atgatgacaccaacttgccatatggctgtgatagctggttttgccaacatgnagggcaag 139 ||||||||||||| || |||||||| ||||||||||||||||| |||||| ||||||| Sbjct: 312747 atgatgacaccaa-ttaccatatggacgtgatagctggttttgctaacatgc-gggcaag 312690 Query: 140 gnaactacagcattccggnaagtgggacaagctaaaggccaagtttatagccggcaggna 199 | ||||| |||||||| | |||||| ||||||| ||||| ||||| ||||| |||||| | Sbjct: 312689 g-aactatagcattcctg-aagtgg-acaagctgaaggcgaagttcatagctggcagg-a 312634 Query: 200 tcatcccagctatcgccacctcgactgcgatggccactggcctcgtgtgcctcgagcttt 259 ||||||| || || |||||||| ||||||||||| ||||| || || ||| | || || | Sbjct: 312633 tcatccctgccattgccacctcaactgcgatggctactggtcttgtctgcttggaactgt 312574 Query: 260 acaaagcccttgctggtggacacaaggtcgaagactaccgcaacacgtttgcaaacctcg 319 |||| | || | |||||| |||||||| ||||||||| | ||||| ||||||||||| | Sbjct: 312573 acaaggtactcggtggtgggcacaaggttgaagactacaggaacacatttgcaaaccttg 312514 Query: 320 cgatcccactgttctccattgctgaaccggttccacccaagaccatcaagcaccaggagc 379 | ||||| || ||||| || ||||| ||||| || ||||||||||||||||||||||| Sbjct: 312513 caatccccctcttctctatggctgagccggtccctcccaagaccatcaagcaccaggaca 312454 Query: 380 tgtcgtggacggtctgggaccggtggactgtaacgggcaacatcacgctgagggagctcc 439 || | ||||| || |||||||| ||||| |||| ||||||||||||||||||||||| | Sbjct: 312453 tggcctggactgtttgggaccgctggaccataactggcaacatcacgctgagggagcttc 312394 Query: 440 tggagtggctcaaggagaagggtctgaacgcttacagcatatnctgtggcacctcgctgc 499 |||| ||||||||||||||||| ||||| || |||||||||| || ||||||||||||| Sbjct: 312393 tggactggctcaaggagaagggcctgaatgcatacagcatatcttgcggcacctcgctgc 312334 Query: 500 t 500 | Sbjct: 312333 t 312333
>emb|BX000501.4|CNS08CDR Oryza sativa chromosome 11, . BAC OSJNBa0032J07 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 160673 Score = 268 bits (135), Expect = 2e-68 Identities = 355/421 (84%), Gaps = 6/421 (1%) Strand = Plus / Plus Query: 80 atgatgacaccaacttgccatatggctgtgatagctggttttgccaacatgnagggcaag 139 ||||||||||||| || |||||||| ||||||||||||||||| |||||| ||||||| Sbjct: 9348 atgatgacaccaa-ttaccatatggacgtgatagctggttttgctaacatgc-gggcaag 9405 Query: 140 gnaactacagcattccggnaagtgggacaagctaaaggccaagtttatagccggcaggna 199 | ||||| |||||||| | |||||| ||||||| ||||| ||||| ||||| |||||| | Sbjct: 9406 g-aactatagcattcctg-aagtgg-acaagctgaaggcgaagttcatagctggcagg-a 9461 Query: 200 tcatcccagctatcgccacctcgactgcgatggccactggcctcgtgtgcctcgagcttt 259 ||||||| || || |||||||| ||||||||||| ||||| || || ||| | || || | Sbjct: 9462 tcatccctgccattgccacctcaactgcgatggctactggtcttgtctgcttggaactgt 9521 Query: 260 acaaagcccttgctggtggacacaaggtcgaagactaccgcaacacgtttgcaaacctcg 319 |||| | || | |||||| |||||||| ||||||||| | ||||| ||||||||||| | Sbjct: 9522 acaaggtactcggtggtgggcacaaggttgaagactacaggaacacatttgcaaaccttg 9581 Query: 320 cgatcccactgttctccattgctgaaccggttccacccaagaccatcaagcaccaggagc 379 | ||||| || ||||| || ||||| ||||| || ||||||||||||||||||||||| Sbjct: 9582 caatccccctcttctctatggctgagccggtccctcccaagaccatcaagcaccaggaca 9641 Query: 380 tgtcgtggacggtctgggaccggtggactgtaacgggcaacatcacgctgagggagctcc 439 || | ||||| || |||||||| ||||| |||| ||||||||||||||||||||||| | Sbjct: 9642 tggcctggactgtttgggaccgctggaccataactggcaacatcacgctgagggagcttc 9701 Query: 440 tggagtggctcaaggagaagggtctgaacgcttacagcatatnctgtggcacctcgctgc 499 |||| ||||||||||||||||| ||||| || |||||||||| || ||||||||||||| Sbjct: 9702 tggactggctcaaggagaagggcctgaatgcatacagcatatcttgcggcacctcgctgc 9761 Query: 500 t 500 | Sbjct: 9762 t 9762
>emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa0052H10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 152222 Score = 268 bits (135), Expect = 2e-68 Identities = 355/421 (84%), Gaps = 6/421 (1%) Strand = Plus / Minus Query: 80 atgatgacaccaacttgccatatggctgtgatagctggttttgccaacatgnagggcaag 139 ||||||||||||| || |||||||| ||||||||||||||||| |||||| ||||||| Sbjct: 45798 atgatgacaccaa-ttaccatatggacgtgatagctggttttgctaacatgc-gggcaag 45741 Query: 140 gnaactacagcattccggnaagtgggacaagctaaaggccaagtttatagccggcaggna 199 | ||||| |||||||| | |||||| ||||||| ||||| ||||| ||||| |||||| | Sbjct: 45740 g-aactatagcattcctg-aagtgg-acaagctgaaggcgaagttcatagctggcagg-a 45685 Query: 200 tcatcccagctatcgccacctcgactgcgatggccactggcctcgtgtgcctcgagcttt 259 ||||||| || || |||||||| ||||||||||| ||||| || || ||| | || || | Sbjct: 45684 tcatccctgccattgccacctcaactgcgatggctactggtcttgtctgcttggaactgt 45625 Query: 260 acaaagcccttgctggtggacacaaggtcgaagactaccgcaacacgtttgcaaacctcg 319 |||| | || | |||||| |||||||| ||||||||| | ||||| ||||||||||| | Sbjct: 45624 acaaggtactcggtggtgggcacaaggttgaagactacaggaacacatttgcaaaccttg 45565 Query: 320 cgatcccactgttctccattgctgaaccggttccacccaagaccatcaagcaccaggagc 379 | ||||| || ||||| || ||||| ||||| || ||||||||||||||||||||||| Sbjct: 45564 caatccccctcttctctatggctgagccggtccctcccaagaccatcaagcaccaggaca 45505 Query: 380 tgtcgtggacggtctgggaccggtggactgtaacgggcaacatcacgctgagggagctcc 439 || | ||||| || |||||||| ||||| |||| ||||||||||||||||||||||| | Sbjct: 45504 tggcctggactgtttgggaccgctggaccataactggcaacatcacgctgagggagcttc 45445 Query: 440 tggagtggctcaaggagaagggtctgaacgcttacagcatatnctgtggcacctcgctgc 499 |||| ||||||||||||||||| ||||| || |||||||||| || ||||||||||||| Sbjct: 45444 tggactggctcaaggagaagggcctgaatgcatacagcatatcttgcggcacctcgctgc 45385 Query: 500 t 500 | Sbjct: 45384 t 45384
>emb|BX000497.1|CNS08CDN Oryza sativa chromosome 11, . BAC OSJNBa0010K05 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 164143 Score = 268 bits (135), Expect = 2e-68 Identities = 355/421 (84%), Gaps = 6/421 (1%) Strand = Plus / Minus Query: 80 atgatgacaccaacttgccatatggctgtgatagctggttttgccaacatgnagggcaag 139 ||||||||||||| || |||||||| ||||||||||||||||| |||||| ||||||| Sbjct: 2963 atgatgacaccaa-ttaccatatggacgtgatagctggttttgctaacatgc-gggcaag 2906 Query: 140 gnaactacagcattccggnaagtgggacaagctaaaggccaagtttatagccggcaggna 199 | ||||| |||||||| | |||||| ||||||| ||||| ||||| ||||| |||||| | Sbjct: 2905 g-aactatagcattcctg-aagtgg-acaagctgaaggcgaagttcatagctggcagg-a 2850 Query: 200 tcatcccagctatcgccacctcgactgcgatggccactggcctcgtgtgcctcgagcttt 259 ||||||| || || |||||||| ||||||||||| ||||| || || ||| | || || | Sbjct: 2849 tcatccctgccattgccacctcaactgcgatggctactggtcttgtctgcttggaactgt 2790 Query: 260 acaaagcccttgctggtggacacaaggtcgaagactaccgcaacacgtttgcaaacctcg 319 |||| | || | |||||| |||||||| ||||||||| | ||||| ||||||||||| | Sbjct: 2789 acaaggtactcggtggtgggcacaaggttgaagactacaggaacacatttgcaaaccttg 2730 Query: 320 cgatcccactgttctccattgctgaaccggttccacccaagaccatcaagcaccaggagc 379 | ||||| || ||||| || ||||| ||||| || ||||||||||||||||||||||| Sbjct: 2729 caatccccctcttctctatggctgagccggtccctcccaagaccatcaagcaccaggaca 2670 Query: 380 tgtcgtggacggtctgggaccggtggactgtaacgggcaacatcacgctgagggagctcc 439 || | ||||| || |||||||| ||||| |||| ||||||||||||||||||||||| | Sbjct: 2669 tggcctggactgtttgggaccgctggaccataactggcaacatcacgctgagggagcttc 2610 Query: 440 tggagtggctcaaggagaagggtctgaacgcttacagcatatnctgtggcacctcgctgc 499 |||| ||||||||||||||||| ||||| || |||||||||| || ||||||||||||| Sbjct: 2609 tggactggctcaaggagaagggcctgaatgcatacagcatatcttgcggcacctcgctgc 2550 Query: 500 t 500 | Sbjct: 2549 t 2549
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 75.8 bits (38), Expect = 1e-10 Identities = 122/150 (81%) Strand = Plus / Minus Query: 211 atcgccacctcgactgcgatggccactggcctcgtgtgcctcgagctttacaaagccctt 270 ||||| || ||||| || ||||| || || || |||||||| ||||||||||| | || Sbjct: 10271709 atcgcaacttcgacagccatggcaacaggacttgtgtgccttgagctttacaaggttctg 10271650 Query: 271 gctggtggacacaaggtcgaagactaccgcaacacgtttgcaaacctcgcgatcccactg 330 |||||||| ||| ||||||||||||||||| ||||||| ||| | || || ||| || Sbjct: 10271649 gctggtgggcaccccgtcgaagactaccgcaattcgtttgctaacttggcaataccaatg 10271590 Query: 331 ttctccattgctgaaccggttccacccaag 360 |||||||| |||||||| ||||||||||| Sbjct: 10271589 ttctccatggctgaacctcttccacccaag 10271560
>gb|AC137072.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0045E22, from chromosome 3, complete sequence Length = 160920 Score = 75.8 bits (38), Expect = 1e-10 Identities = 122/150 (81%) Strand = Plus / Minus Query: 211 atcgccacctcgactgcgatggccactggcctcgtgtgcctcgagctttacaaagccctt 270 ||||| || ||||| || ||||| || || || |||||||| ||||||||||| | || Sbjct: 133122 atcgcaacttcgacagccatggcaacaggacttgtgtgccttgagctttacaaggttctg 133063 Query: 271 gctggtggacacaaggtcgaagactaccgcaacacgtttgcaaacctcgcgatcccactg 330 |||||||| ||| ||||||||||||||||| ||||||| ||| | || || ||| || Sbjct: 133062 gctggtgggcaccccgtcgaagactaccgcaattcgtttgctaacttggcaataccaatg 133003 Query: 331 ttctccattgctgaaccggttccacccaag 360 |||||||| |||||||| ||||||||||| Sbjct: 133002 ttctccatggctgaacctcttccacccaag 132973
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 75.8 bits (38), Expect = 1e-10 Identities = 122/150 (81%) Strand = Plus / Minus Query: 211 atcgccacctcgactgcgatggccactggcctcgtgtgcctcgagctttacaaagccctt 270 ||||| || ||||| || ||||| || || || |||||||| ||||||||||| | || Sbjct: 10269810 atcgcaacttcgacagccatggcaacaggacttgtgtgccttgagctttacaaggttctg 10269751 Query: 271 gctggtggacacaaggtcgaagactaccgcaacacgtttgcaaacctcgcgatcccactg 330 |||||||| ||| ||||||||||||||||| ||||||| ||| | || || ||| || Sbjct: 10269750 gctggtgggcaccccgtcgaagactaccgcaattcgtttgctaacttggcaataccaatg 10269691 Query: 331 ttctccattgctgaaccggttccacccaag 360 |||||||| |||||||| ||||||||||| Sbjct: 10269690 ttctccatggctgaacctcttccacccaag 10269661
>dbj|AK120544.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129J22, full insert sequence Length = 3682 Score = 75.8 bits (38), Expect = 1e-10 Identities = 122/150 (81%) Strand = Plus / Plus Query: 211 atcgccacctcgactgcgatggccactggcctcgtgtgcctcgagctttacaaagccctt 270 ||||| || ||||| || ||||| || || || |||||||| ||||||||||| | || Sbjct: 2929 atcgcaacttcgacagccatggcaacaggacttgtgtgccttgagctttacaaggttctg 2988 Query: 271 gctggtggacacaaggtcgaagactaccgcaacacgtttgcaaacctcgcgatcccactg 330 |||||||| ||| ||||||||||||||||| ||||||| ||| | || || ||| || Sbjct: 2989 gctggtgggcaccccgtcgaagactaccgcaattcgtttgctaacttggcaataccaatg 3048 Query: 331 ttctccattgctgaaccggttccacccaag 360 |||||||| |||||||| ||||||||||| Sbjct: 3049 ttctccatggctgaacctcttccacccaag 3078
>gb|M90664.1|WHTE1B Wheat ubiquitin activating enzyme (E1) mRNA, complete cds Length = 3588 Score = 75.8 bits (38), Expect = 1e-10 Identities = 171/214 (79%), Gaps = 1/214 (0%) Strand = Plus / Plus Query: 165 gacaagctaaaggccaagtttatagccggcaggnatcatcccagctatcgccacctcgac 224 |||||||| ||||||||||| || || |||||| |||||||| || || || ||||| || Sbjct: 2832 gacaagctgaaggccaagttcatcgcaggcagg-atcatcccggccattgcaacctcaac 2890 Query: 225 tgcgatggccactggcctcgtgtgcctcgagctttacaaagcccttgctggtggacacaa 284 || |||||||| || ||||||||||||||||| ||||| | | | || || | ||| Sbjct: 2891 cgccatggccacaggactcgtgtgcctcgagctgtacaaggtcatcgccggcgagcaccc 2950 Query: 285 ggtcgaagactaccgcaacacgtttgcaaacctcgcgatcccactgttctccattgctga 344 ||||| |||||||||||||| || || |||||||| ||||||| ||||| || || || Sbjct: 2951 cgtcgaggactaccgcaacacattcgcgaacctcgccctcccactcttctcgatggccga 3010 Query: 345 accggttccacccaagaccatcaagcaccaggag 378 ||||| || |||||| ||| |||||| ||||| Sbjct: 3011 gccggtcccgcccaaggtcatgaagcacaaggag 3044
>emb|AJ299395.1|CAR299395 Cicer arietinum partial mRNA for ubiquitin activating enzyme E1 (ORF), clone CanUBC-1 Length = 807 Score = 61.9 bits (31), Expect = 2e-06 Identities = 65/75 (86%), Gaps = 1/75 (1%) Strand = Plus / Plus Query: 165 gacaagctaaaggccaagtttatagccggcaggnatcatcccagctatcgccacctcgac 224 ||||| || |||||||||||||| || || ||| ||||| |||||||| || |||||||| Sbjct: 9 gacaaactcaaggccaagtttatcgcaggaagg-atcattccagctattgcaacctcgac 67 Query: 225 tgcgatggccactgg 239 ||| ||||||||||| Sbjct: 68 tgctatggccactgg 82
>ref|NM_185567.2| Oryza sativa (japonica cultivar-group), mRNA Length = 3522 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 289 gaagactaccgcaacacgtttgcaaacctcgcgatcccactgttctccattgctgaaccg 348 |||||||||||||| || ||||| ||||| || | ||||| ||||| || |||||||| Sbjct: 2968 gaagactaccgcaatacatttgcgaacctggcactgccactattctcaatggctgaacct 3027 Query: 349 gttccacccaag 360 |||||||||||| Sbjct: 3028 gttccacccaag 3039 Score = 44.1 bits (22), Expect = 0.44 Identities = 30/33 (90%) Strand = Plus / Plus Query: 468 cgcttacagcatatnctgtggcacctcgctgct 500 |||||||||||| | ||||||||| |||||||| Sbjct: 3147 cgcttacagcatttcctgtggcacttcgctgct 3179
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 289 gaagactaccgcaacacgtttgcaaacctcgcgatcccactgttctccattgctgaaccg 348 |||||||||||||| || ||||| ||||| || | ||||| ||||| || |||||||| Sbjct: 29429467 gaagactaccgcaatacatttgcgaacctggcactgccactattctcaatggctgaacct 29429526 Query: 349 gttccacccaag 360 |||||||||||| Sbjct: 29429527 gttccacccaag 29429538 Score = 44.1 bits (22), Expect = 0.44 Identities = 30/33 (90%) Strand = Plus / Plus Query: 468 cgcttacagcatatnctgtggcacctcgctgct 500 |||||||||||| | ||||||||| |||||||| Sbjct: 29429646 cgcttacagcatttcctgtggcacttcgctgct 29429678
>dbj|AK074007.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076H04, full insert sequence Length = 3522 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 289 gaagactaccgcaacacgtttgcaaacctcgcgatcccactgttctccattgctgaaccg 348 |||||||||||||| || ||||| ||||| || | ||||| ||||| || |||||||| Sbjct: 2968 gaagactaccgcaatacatttgcgaacctggcactgccactattctcaatggctgaacct 3027 Query: 349 gttccacccaag 360 |||||||||||| Sbjct: 3028 gttccacccaag 3039 Score = 44.1 bits (22), Expect = 0.44 Identities = 30/33 (90%) Strand = Plus / Plus Query: 468 cgcttacagcatatnctgtggcacctcgctgct 500 |||||||||||| | ||||||||| |||||||| Sbjct: 3147 cgcttacagcatttcctgtggcacttcgctgct 3179
>dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0034A04 Length = 151263 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 289 gaagactaccgcaacacgtttgcaaacctcgcgatcccactgttctccattgctgaaccg 348 |||||||||||||| || ||||| ||||| || | ||||| ||||| || |||||||| Sbjct: 92389 gaagactaccgcaatacatttgcgaacctggcactgccactattctcaatggctgaacct 92448 Query: 349 gttccacccaag 360 |||||||||||| Sbjct: 92449 gttccacccaag 92460 Score = 44.1 bits (22), Expect = 0.44 Identities = 30/33 (90%) Strand = Plus / Plus Query: 468 cgcttacagcatatnctgtggcacctcgctgct 500 |||||||||||| | ||||||||| |||||||| Sbjct: 92568 cgcttacagcatttcctgtggcacttcgctgct 92600
>ref|NM_128566.3| Arabidopsis thaliana ATUBA1; ubiquitin activating enzyme AT2G30110 (ATUBA1) mRNA, complete cds Length = 3626 Score = 52.0 bits (26), Expect = 0.002 Identities = 125/158 (79%) Strand = Plus / Plus Query: 199 atcatcccagctatcgccacctcgactgcgatggccactggcctcgtgtgcctcgagctt 258 ||||||||||| || || || || || || ||||| ||||| || || ||||||||||| Sbjct: 2884 atcatcccagccattgcgacttcaacagccatggctactgggctggtctgcctcgagctg 2943 Query: 259 tacaaagcccttgctggtggacacaaggtcgaagactaccgcaacacgtttgcaaacctc 318 ||||| | ||||| ||| ||||| || || |||| ||| | ||||| ||||| ||||| Sbjct: 2944 tacaaggtccttgatggaggacataaagtggaagcttacagaaacacatttgccaacctg 3003 Query: 319 gcgatcccactgttctccattgctgaaccggttccacc 356 || | ||||| |||||||| |||||||| ||||||| Sbjct: 3004 gcacttccactattctccatggctgaaccacttccacc 3041
>gb|AC004165.3| Arabidopsis thaliana chromosome 2 clone T27E13 map m283, complete sequence Length = 83796 Score = 52.0 bits (26), Expect = 0.002 Identities = 125/158 (79%) Strand = Plus / Plus Query: 199 atcatcccagctatcgccacctcgactgcgatggccactggcctcgtgtgcctcgagctt 258 ||||||||||| || || || || || || ||||| ||||| || || ||||||||||| Sbjct: 52526 atcatcccagccattgcgacttcaacagccatggctactgggctggtctgcctcgagctg 52585 Query: 259 tacaaagcccttgctggtggacacaaggtcgaagactaccgcaacacgtttgcaaacctc 318 ||||| | ||||| ||| ||||| || || |||| ||| | ||||| ||||| ||||| Sbjct: 52586 tacaaggtccttgatggaggacataaagtggaagcttacagaaacacatttgccaacctg 52645 Query: 319 gcgatcccactgttctccattgctgaaccggttccacc 356 || | ||||| |||||||| |||||||| ||||||| Sbjct: 52646 gcacttccactattctccatggctgaaccacttccacc 52683
>gb|AY090248.1| Arabidopsis thaliana At2g30110/T27E13.15 mRNA, complete cds Length = 3561 Score = 52.0 bits (26), Expect = 0.002 Identities = 125/158 (79%) Strand = Plus / Plus Query: 199 atcatcccagctatcgccacctcgactgcgatggccactggcctcgtgtgcctcgagctt 258 ||||||||||| || || || || || || ||||| ||||| || || ||||||||||| Sbjct: 2845 atcatcccagccattgcgacttcaacagccatggctactgggctggtctgcctcgagctg 2904 Query: 259 tacaaagcccttgctggtggacacaaggtcgaagactaccgcaacacgtttgcaaacctc 318 ||||| | ||||| ||| ||||| || || |||| ||| | ||||| ||||| ||||| Sbjct: 2905 tacaaggtccttgatggaggacataaagtggaagcttacagaaacacatttgccaacctg 2964 Query: 319 gcgatcccactgttctccattgctgaaccggttccacc 356 || | ||||| |||||||| |||||||| ||||||| Sbjct: 2965 gcacttccactattctccatggctgaaccacttccacc 3002
>gb|BT006363.1| Arabidopsis thaliana At2g30110/T27E13.15 gene, complete cds Length = 3243 Score = 52.0 bits (26), Expect = 0.002 Identities = 125/158 (79%) Strand = Plus / Plus Query: 199 atcatcccagctatcgccacctcgactgcgatggccactggcctcgtgtgcctcgagctt 258 ||||||||||| || || || || || || ||||| ||||| || || ||||||||||| Sbjct: 2761 atcatcccagccattgcgacttcaacagccatggctactgggctggtctgcctcgagctg 2820 Query: 259 tacaaagcccttgctggtggacacaaggtcgaagactaccgcaacacgtttgcaaacctc 318 ||||| | ||||| ||| ||||| || || |||| ||| | ||||| ||||| ||||| Sbjct: 2821 tacaaggtccttgatggaggacataaagtggaagcttacagaaacacatttgccaacctg 2880 Query: 319 gcgatcccactgttctccattgctgaaccggttccacc 356 || | ||||| |||||||| |||||||| ||||||| Sbjct: 2881 gcacttccactattctccatggctgaaccacttccacc 2918
>gb|U80808.1|ATU80808 Arabidopsis thaliana ubiquitin activating enzyme (UBA1) gene, complete cds Length = 3346 Score = 52.0 bits (26), Expect = 0.002 Identities = 125/158 (79%) Strand = Plus / Plus Query: 199 atcatcccagctatcgccacctcgactgcgatggccactggcctcgtgtgcctcgagctt 258 ||||||||||| || || || || || || ||||| ||||| || || ||||||||||| Sbjct: 2858 atcatcccagccattgcgacttcaacagccatggctactgggctggtctgcctcgagctg 2917 Query: 259 tacaaagcccttgctggtggacacaaggtcgaagactaccgcaacacgtttgcaaacctc 318 ||||| | ||||| ||| ||||| || || |||| ||| | ||||| ||||| ||||| Sbjct: 2918 tacaaggtccttgatggaggacataaagtggaagcttacagaaacacatttgccaacctg 2977 Query: 319 gcgatcccactgttctccattgctgaaccggttccacc 356 || | ||||| |||||||| |||||||| ||||||| Sbjct: 2978 gcacttccactattctccatggctgaaccacttccacc 3015
>emb|BX820519.1|CNS0A9M5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH43ZE11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1375 Score = 52.0 bits (26), Expect = 0.002 Identities = 125/158 (79%) Strand = Plus / Plus Query: 199 atcatcccagctatcgccacctcgactgcgatggccactggcctcgtgtgcctcgagctt 258 ||||||||||| || || || || || || ||||| ||||| || || ||||||||||| Sbjct: 691 atcatcccagccattgcgacttcaacagccatggctactgggctggtctgcctcgagctg 750 Query: 259 tacaaagcccttgctggtggacacaaggtcgaagactaccgcaacacgtttgcaaacctc 318 ||||| | ||||| ||| ||||| || || |||| ||| | ||||| ||||| ||||| Sbjct: 751 tacaaggtccttgatggaggacataaagtggaagcttacagaaacacatttgccaacctg 810 Query: 319 gcgatcccactgttctccattgctgaaccggttccacc 356 || | ||||| |||||||| |||||||| ||||||| Sbjct: 811 gcacttccactattctccatggctgaaccacttccacc 848
>emb|BX820277.1|CNS0A9OY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH16ZF09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 930 Score = 52.0 bits (26), Expect = 0.002 Identities = 125/158 (79%) Strand = Plus / Plus Query: 199 atcatcccagctatcgccacctcgactgcgatggccactggcctcgtgtgcctcgagctt 258 ||||||||||| || || || || || || ||||| ||||| || || ||||||||||| Sbjct: 197 atcatcccagccattgcgacttcaacagccatggctactgggctggtctgcctcgagctg 256 Query: 259 tacaaagcccttgctggtggacacaaggtcgaagactaccgcaacacgtttgcaaacctc 318 ||||| | ||||| ||| ||||| || || |||| ||| | ||||| ||||| ||||| Sbjct: 257 tacaaggtccttgatggaggacataaagtggaagcttacagaaacacatttgccaacctg 316 Query: 319 gcgatcccactgttctccattgctgaaccggttccacc 356 || | ||||| |||||||| |||||||| ||||||| Sbjct: 317 gcacttccactattctccatggctgaaccacttccacc 354
>emb|Y10804.1|NTUAEE1 N.tabaccum mRNA for ubiquitin activating enzyme E1 Length = 3559 Score = 46.1 bits (23), Expect = 0.11 Identities = 72/87 (82%), Gaps = 1/87 (1%) Strand = Plus / Plus Query: 174 aaggccaagtttatagccggcaggnatcatcccagctatcgccacctcgactgcgatggc 233 ||||||||||| ||||| || ||| ||||| |||||||| || || || ||||| ||||| Sbjct: 2843 aaggccaagttcatagcagggagg-atcattccagctattgctacttccactgctatggc 2901 Query: 234 cactggcctcgtgtgcctcgagcttta 260 |||||| || || || || |||||||| Sbjct: 2902 cactggtcttgtttgtctagagcttta 2928
>dbj|AB124879.1| Nicotiana tabacum mRNA for ubiquitin activating enzyme 1, complete cds Length = 3243 Score = 46.1 bits (23), Expect = 0.11 Identities = 72/87 (82%), Gaps = 1/87 (1%) Strand = Plus / Plus Query: 174 aaggccaagtttatagccggcaggnatcatcccagctatcgccacctcgactgcgatggc 233 ||||||||||| ||||| || ||| ||||| |||||||| || || || ||||| ||||| Sbjct: 2737 aaggccaagttcatagcagggagg-atcattccagctattgctacttccactgctatggc 2795 Query: 234 cactggcctcgtgtgcctcgagcttta 260 |||||| || || || || |||||||| Sbjct: 2796 cactggtcttgtttgtctagagcttta 2822
>gb|AC183482.3| Dasypus novemcinctus clone VMRC5-411P7, complete sequence Length = 85272 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 428 tgagggagctcctggagtgg 447 |||||||||||||||||||| Sbjct: 85154 tgagggagctcctggagtgg 85173
>ref|NM_001014080.1| Rattus norvegicus similar to ubiquitin-protein ligase (EC 6.3.2.19) E1 - mouse (LOC314432), mRNA Length = 3618 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 atcatcccagctatcgccac 218 |||||||||||||||||||| Sbjct: 2843 atcatcccagctatcgccac 2862
>ref|XM_502040.1| Yarrowia lipolytica CLIB122, YALI0C20141g predicted mRNA Length = 549 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 gctcaaggagaagggtctga 466 |||||||||||||||||||| Sbjct: 489 gctcaaggagaagggtctga 508
>emb|AL158193.13| Human DNA sequence from clone RP11-400N12 on chromosome 13 Contains the 3' end of the UBL3 gene for ubiquitin-like 3 and a CpG island, complete sequence Length = 172896 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 264 agcccttgctggtggacacaaggt 287 ||||||||||||||| |||||||| Sbjct: 58677 agcccttgctggtggtcacaaggt 58654
>gb|BC085791.1| Rattus norvegicus similar to ubiquitin-protein ligase (EC 6.3.2.19) E1 - mouse, mRNA (cDNA clone MGC:93773 IMAGE:7109118), complete cds Length = 3618 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 atcatcccagctatcgccac 218 |||||||||||||||||||| Sbjct: 2843 atcatcccagctatcgccac 2862
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 gctcaaggagaagggtctga 466 |||||||||||||||||||| Sbjct: 2726877 gctcaaggagaagggtctga 2726896 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,643,209 Number of Sequences: 3902068 Number of extensions: 2643209 Number of successful extensions: 42923 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 37 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 42748 Number of HSP's gapped (non-prelim): 149 length of query: 504 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 482 effective length of database: 17,147,199,772 effective search space: 8264950290104 effective search space used: 8264950290104 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
