>YIOR_CVTKE (P26626) Hypothetical protein in nucleocapsid ORF (IORF)|
          Length = 207

 Score = 30.4 bits (67), Expect = 3.2
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = +3

Query: 15  NLSLRRGEAALIHFEASNYVLQGTGRINTDVPLTLSLPKXEWSCH 149
           +L+L+R +  L+H E+    L+GTG   TDV L   +      CH
Sbjct: 57  SLNLQRDKVCLLHQESQLLKLRGTGTDTTDVLLKQPMATSVNCCH 101

>YIOR_CVBM (P10525) Hypothetical protein in nucleocapsid ORF (IORF)|
          Length = 207

 Score = 30.4 bits (67), Expect = 3.2
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = +3

Query: 15  NLSLRRGEAALIHFEASNYVLQGTGRINTDVPLTLSLPKXEWSCH 149
           +L+L+R +  L+H E+    L+GTG   TDV L   +      CH
Sbjct: 57  SLNLQRDKVCLLHQESQLLKLRGTGTDTTDVLLKQPMATSVNCCH 101

>YIOR_CVBF (P22654) Hypothetical protein in nucleocapsid ORF (IORF)|
          Length = 207

 Score = 29.6 bits (65), Expect = 5.5
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = +3

Query: 15  NLSLRRGEAALIHFEASNYVLQGTGRINTDVPLTLSLPKXEWSCH 149
           +L+L R +  L+H E+    L+GTG   TDV L  ++      CH
Sbjct: 57  SLNLLRDKVCLLHQESQLLKLRGTGTDTTDVLLKHAMATSVNCCH 101

>Y2585_BACHD (Q9K9R0) UPF0348 protein BH2585|
          Length = 416

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = +3

Query: 24  LRRGEAALI-HFEASNYVLQGTGRINTDVPLTLSLPKXEW 140
           L+RGE A++  +E ++  LQG   +  ++P   S  K EW
Sbjct: 42  LQRGEPAILPKWERTSLALQGGADLVVELPYAFSTQKAEW 81

>B3A3_RAT (P23348) Anion exchange protein 3 (Neuronal band 3-like protein)|
           (Solute carrier family 4 member 3)
          Length = 1227

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +1

Query: 241 SKLFFKQATSWQPCAASDLMISVSSELSLRNPSPSARVP 357
           S++  +++  W P A+ DL   +    +L NP P  RVP
Sbjct: 213 SRISTEKSRPWSPSASYDLRERLCPGSALGNPGPEQRVP 251

>B3A3_MOUSE (P16283) Anion exchange protein 3 (Neuronal band 3-like protein)|
           (Solute carrier family 4 member 3)
          Length = 1227

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +1

Query: 241 SKLFFKQATSWQPCAASDLMISVSSELSLRNPSPSARVP 357
           S++  +++  W P A+ DL   +    +L NP P  RVP
Sbjct: 213 SRISTEKSRPWSPSASYDLRERLCPGSALGNPGPEQRVP 251


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,662,210
Number of Sequences: 219361
Number of extensions: 1166892
Number of successful extensions: 2299
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2299
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4142954952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)