>CIGA_DICDI (P14606) Cyclic AMP-inducible protein BP74 precursor|
          Length = 786

 Score = 36.6 bits (83), Expect = 0.090
 Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 1/112 (0%)
 Frame = +1

Query: 259 DHPQGVMYGGSDGEDLHQLTGTDHPQEVKYGGSGAEDLHQLTGTDHPQE-VFTQDACHDA 435
           DHP+  +Y G   +DL +    +H +++ Y G   +DL +    +H +E V+  D   D 
Sbjct: 675 DHPEKEIYEGDIKQDLLRRNNKNHQEKLVYEGDIKQDLLRRNKKNHKEEQVYQGDIIQDI 734

Query: 436 GSNGNTADKETGTSKSTNEIDTSKPTSDIMARIKKYLADESFHDTLFKVEKI 591
               N  +KE       NE +  K   D+M R   +  +E+  D   ++ K+
Sbjct: 735 LRVLNHGEKE------VNEDEIEK---DLMQRKNHHQEEEASEDLEEEIGKL 777

>PIN4_ARATH (Q8RWZ6) Auxin efflux carrier component 4 (AtPIN4)|
          Length = 616

 Score = 33.5 bits (75), Expect = 0.77
 Identities = 26/133 (19%), Positives = 56/133 (42%), Gaps = 13/133 (9%)
 Frame = +1

Query: 175 PLSFTEMLKNLSTETEHDAEDLHQL--AGTDHPQGVMYGGSDGEDLH-----------QL 315
           P    + L+   ++  HDA++LH    + +  P   ++GG  G+++            ++
Sbjct: 327 PKENQQQLQEKDSKASHDAKELHMFVWSSSASPVSDVFGGGAGDNVATEQSEQGAKEIRM 386

Query: 316 TGTDHPQEVKYGGSGAEDLHQLTGTDHPQEVFTQDACHDAGSNGNTADKETGTSKSTNEI 495
             +D P++    G G +D+  L   +  +E+    A  +   + +TA+ E          
Sbjct: 387 VVSDQPRKSNARG-GGDDIGGLDSGEGEREIEKATAGLNKMGSNSTAELEAAGGDGGGNN 445

Query: 496 DTSKPTSDIMARI 534
            T  P + +M R+
Sbjct: 446 GTHMPPTSVMTRL 458

>ATG2_NEUCR (Q871L5) Autophagy-related protein 2|
          Length = 2011

 Score = 31.6 bits (70), Expect = 2.9
 Identities = 32/135 (23%), Positives = 59/135 (43%), Gaps = 8/135 (5%)
 Frame = +1

Query: 214  ETEHDAEDLHQLAGTDHPQGVMYGGSDGEDLHQLTGTDHPQEVKYGGSGAEDLHQLTGTD 393
            E E+D +D    AG    QG+  G  D +D + +  T+H +    G   AE+L   T + 
Sbjct: 1332 EGEYDFDD--DFAGA---QGIECGNEDDDDYYGIGSTEHLEIQSEGYGVAEELFDATNSS 1386

Query: 394  HPQEVFTQDACHDAGSNGNTADKETGTSKSTNEID------TSKPTSDIMAR--IKKYLA 549
               ++  ++       +    D    +S+S +++D      +S+P  +   R   +K L 
Sbjct: 1387 LLGDIEVENTNDGMLVSTANLDVPPVSSQSESDLDIQENYFSSEPVKNTTLRWNSRKNLY 1446

Query: 550  DESFHDTLFKVEKII 594
            D+S    +FK   +I
Sbjct: 1447 DQSSDAQVFKSPLVI 1461

>PTC1_BRARE (Q98864) Protein patched homolog 1 (Patched 1) (PTC1)|
          Length = 1220

 Score = 31.2 bits (69), Expect = 3.8
 Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
 Frame = -1

Query: 647  RSSASDPYMHNAFTPSSSMIFSTLNSV-----SWNDSSARYFF-ILAIISLVGLLVSISF 486
            R++ S   M + F P      STL  V     S  D   RYFF +LAI++L+G+L  +  
Sbjct: 1100 RNTRSAVAMEHMFAPVIDGAISTLLGVLMLAGSEFDFIMRYFFAVLAILTLLGILNGL-- 1157

Query: 485  VDLLVPVSLSAVFP 444
              +L+PV LS + P
Sbjct: 1158 --VLLPVLLSLMGP 1169

>RP1L1_MOUSE (Q8CGM2) Retinitis pigmentosa 1-like 1 protein (Retinitis pigmentosa|
            1-like protein 1)
          Length = 1859

 Score = 30.4 bits (67), Expect = 6.5
 Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 21/91 (23%)
 Frame = +1

Query: 232  EDLHQLAGTDHPQGV-MYGGSDGEDLHQLTGTDHPQEVKYGGSG---------------- 360
            EDL  + G D  QG+ +  G +GE   +L   + P+ +K  GSG                
Sbjct: 1594 EDLGTVQGADEKQGLGVAEGEEGEGKQRLRAEEDPEILKTEGSGCCAPEEDEATEEDGEI 1653

Query: 361  ----AEDLHQLTGTDHPQEVFTQDACHDAGS 441
                A++  QL GT+  +E     +  D G+
Sbjct: 1654 CIGTAQESQQLEGTEMGKEGTLPQSFRDGGT 1684

>HKR1_YEAST (P41809) Hansenula MRAKII killer toxin-resistant protein 1|
           precursor
          Length = 1802

 Score = 30.0 bits (66), Expect = 8.5
 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
 Frame = +1

Query: 436 GSNGNTA---DKETGTSKSTNEIDTSKPTSDIMARIKK 540
           G +G+T    ++ETGTS     + T+  TSD M+ +KK
Sbjct: 73  GESGSTTIMDEQETGTSSQYISVTTTTQTSDTMSSVKK 110

>MURC_RICTY (Q68XC2) UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8)|
           (UDP-N-acetylmuramoyl-L-alanine synthetase)
          Length = 498

 Score = 30.0 bits (66), Expect = 8.5
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +1

Query: 580 VEKIIDELGVKALCMYGSDAEDLHQLAGN 666
           V K++D++  + +  YG DAED H +A N
Sbjct: 229 VRKLVDDITERKIITYGIDAEDAHIIAFN 257

>ASNH1_METJA (Q58516) Putative asparagine synthetase [glutamine-hydrolyzing] 1|
           (EC 6.3.5.4)
          Length = 541

 Score = 30.0 bits (66), Expect = 8.5
 Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = +1

Query: 469 GTSKSTNEIDTSKPTSDIMARI-KKYLADESFHDTLFKVEKIIDEL 603
           GT  S + I   +   D+  ++ KK +++E + + +FKV K IDE+
Sbjct: 290 GTENSEDLIYAERLAKDLNLKLRKKIISEEEYEEYVFKVAKAIDEV 335


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 107,154,960
Number of Sequences: 219361
Number of extensions: 2228110
Number of successful extensions: 6065
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6044
length of database: 80,573,946
effective HSP length: 110
effective length of database: 56,444,236
effective search space used: 8353746928
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)