| Clone Name | bags1c01 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY135021.1| Triticum aestivum GTP-binding protein mRNA, complete cds Length = 1143 Score = 753 bits (380), Expect = 0.0 Identities = 422/436 (96%) Strand = Plus / Plus Query: 1 tcactcatattgatgatacagttgatcctgttcgtgatttggaaactattagtcacgaac 60 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 101 tcactcatattgatgatacagttgatcctgttcgtgatttggaaactattagtcaagaac 160 Query: 61 tgaggctcaaggatatagagtttgtgcaggctaaaattgatgaccttgagaagtcaatga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 161 tgaggctcaaggatatagagtttgtgcaggctaaaattgatgaccttgagaagtcaatga 220 Query: 121 agaggagcaatgacaagcaacttaagatagaccatgaattatgtcagaggatcatggcac 180 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 221 agaggagcaatgacaagcaacttaagatagaccatgaattatgtcagagggtcatggcac 280 Query: 181 atctccaagacgggaaagatgtacgtttaggggaatggaaagctgctgaaattgagatct 240 ||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 281 atctccaagacaggaaagacgtacgtttaggagaatggaaagctgctgaaattgagatct 340 Query: 241 tgaatacctttcagctgcttactgccaagcccgttgtttatttggtgaacatgagtgaaa 300 ||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||| Sbjct: 341 tgaatgcctttcagctgcttactgcgaagccagttgtttatttggtgaacatgagtgaaa 400 Query: 301 aggactacctgaggaaaaagaacaagttcctaccaaagatacatgcttgggtgcaagaac 360 |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 401 aggactacctgaggaaaaagaacaagtttctaccaaagatacatgcttgggtgaaagaac 460 Query: 361 atggtggtgaaactattattcctttcagctgtgcctttgaacagaaactagtggatatgc 420 | |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 461 acggtggtgagactattattcctttcagctgtgccttcgaacagaaactagtggatatgc 520 Query: 421 caggagatgaagctgc 436 ||| |||||||||||| Sbjct: 521 cagaagatgaagctgc 536
>gb|BT009621.1| Triticum aestivum clone wre1n.pk0134.h7:fis, full insert mRNA sequence Length = 1608 Score = 729 bits (368), Expect = 0.0 Identities = 419/436 (96%) Strand = Plus / Plus Query: 1 tcactcatattgatgatacagttgatcctgttcgtgatttggaaactattagtcacgaac 60 |||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 515 tcacccatattgatgatacagttgatcctgttcgtgatttggaaactattactcaagaac 574 Query: 61 tgaggctcaaggatatagagtttgtgcaggctaaaattgatgaccttgagaagtcaatga 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 575 tgaggctcaaggatatagagtttgtgcaggctaaaattgatgaccttgagaaggcaatga 634 Query: 121 agaggagcaatgacaagcaacttaagatagaccatgaattatgtcagaggatcatggcac 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 635 agaggagcaatgacaagcaacttaagatagaccatgaattatgtcagaggatcatgacac 694 Query: 181 atctccaagacgggaaagatgtacgtttaggggaatggaaagctgctgaaattgagatct 240 |||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 695 atcttcaagacgggaaagacctacgtttaggagaatggaaagctgctgaaattgagatct 754 Query: 241 tgaatacctttcagctgcttactgccaagcccgttgtttatttggtgaacatgagtgaaa 300 ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| Sbjct: 755 tgaatacctttcagctgcttactgctaagccagttgtttatttggtgaacatgagtgaaa 814 Query: 301 aggactacctgaggaaaaagaacaagttcctaccaaagatacatgcttgggtgcaagaac 360 ||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||| | Sbjct: 815 aggactacctgagaaaaaagaacaagtttctaccaaagatacatgcttgggtgaaagagc 874 Query: 361 atggtggtgaaactattattcctttcagctgtgcctttgaacagaaactagtggatatgc 420 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 875 atggtggtgaaactattattcctttcagctgtgccttcgaacagaaactagtggatatgc 934 Query: 421 caggagatgaagctgc 436 ||| |||||||||||| Sbjct: 935 cagaagatgaagctgc 950
>gb|AY105761.1| Zea mays PCO136937 mRNA sequence Length = 1586 Score = 349 bits (176), Expect = 5e-93 Identities = 371/436 (85%) Strand = Plus / Plus Query: 3 actcatattgatgatacagttgatcctgttcgtgatttggaaactattagtcacgaactg 62 |||||| |||| |||||||| ||||||||| | || |||||||||||||| | || || Sbjct: 543 actcatgttgacgatacagtagatcctgttagagacatggaaactattagtgaagagctc 602 Query: 63 aggctcaaggatatagagtttgtgcaggctaaaattgatgaccttgagaagtcaatgaag 122 || || |||||||||||||| || | ||| |||| |||||||| |||||||||||| Sbjct: 603 agactaaaggatatagagttcatgaaaaagaaacttgaggaccttgataagtcaatgaag 662 Query: 123 aggagcaatgacaagcaacttaagatagaccatgaattatgtcagaggatcatggcacat 182 ||||||||||| ||||| || || || || |||||||||||| ||||| |||| | ||| Sbjct: 663 aggagcaatgataagcagctcaaaattgagcatgaattatgtgagagggtcataggccat 722 Query: 183 ctccaagacgggaaagatgtacgtttaggggaatggaaagctgctgaaattgagatcttg 242 || | || ||||||||||| |||||||| || |||||||||||||| |||||||||||| Sbjct: 723 cttgaggaagggaaagatgtccgtttaggagattggaaagctgctgacattgagatcttg 782 Query: 243 aatacctttcagctgcttactgccaagcccgttgtttatttggtgaacatgagtgaaaag 302 ||||| || ||||| ||| | || ||||| ||||| ||||||||||| |||||||| ||| Sbjct: 783 aatacattccagctactttcagctaagccagttgtctatttggtgaatatgagtgagaag 842 Query: 303 gactacctgaggaaaaagaacaagttcctaccaaagatacatgcttgggtgcaagaacat 362 || | || ||| |||||||||||||| ||||| |||||||||||||||||||| |||||| Sbjct: 843 gatttccagagaaaaaagaacaagtttctacccaagatacatgcttgggtgcaggaacat 902 Query: 363 ggtggtgaaactattattcctttcagctgtgcctttgaacagaaactagtggatatgcca 422 ||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 903 ggtggtgaaaccatacttcctttcagctgtgcttttgaacagaaactagtggatatgcca 962 Query: 423 ggagatgaagctgcca 438 | ||||||||| |||| Sbjct: 963 gaagatgaagccgcca 978
>ref|XM_480550.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1533 Score = 347 bits (175), Expect = 2e-92 Identities = 343/399 (85%) Strand = Plus / Plus Query: 3 actcatattgatgatacagttgatcctgttcgtgatttggaaactattagtcacgaactg 62 ||||||||||||||| |||| ||||||||| | ||||||||||||||| || | || ||| Sbjct: 492 actcatattgatgattcagtggatcctgttagagatttggaaactattggtgaagagctg 551 Query: 63 aggctcaaggatatagagtttgtgcaggctaaaattgatgaccttgagaagtcaatgaag 122 || |||||||| || |||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 552 agactcaaggacattgagtttgtgcagaacaaaattgatgaccttgagaaatcaatgaag 611 Query: 123 aggagcaatgacaagcaacttaagatagaccatgaattatgtcagaggatcatggcacat 182 || |||||||| ||||| || || | || |||||||||||| ||| | ||| || ||| Sbjct: 612 agaagcaatgataagcagctgaaactcgagcatgaattatgtgagaaggtcaaagcccat 671 Query: 183 ctccaagacgggaaagatgtacgtttaggggaatggaaagctgctgaaattgagatcttg 242 || |||| || || ||||| || || || || |||||| |||||| |||||||||||| Sbjct: 672 cttgaagatggaaaggatgtccgctttggagattggaaaagtgctgacattgagatcttg 731 Query: 243 aatacctttcagctgcttactgccaagcccgttgtttatttggtgaacatgagtgaaaag 302 |||||||| ||||| ||||| || ||||| ||||| |||||||||||||||||||| ||| Sbjct: 732 aataccttccagctacttacagctaagccagttgtctatttggtgaacatgagtgagaag 791 Query: 303 gactacctgaggaaaaagaacaagttcctaccaaagatacatgcttgggtgcaagaacat 362 ||||||| |||||||||||||||||||||||| ||||||||||| ||||| || |||||| Sbjct: 792 gactaccagaggaaaaagaacaagttcctacctaagatacatgcctgggttcaggaacat 851 Query: 363 ggtggtgaaactattattcctttcagctgtgcctttgaa 401 ||||||||||||||||||||||| |||||||| |||||| Sbjct: 852 ggtggtgaaactattattccttttagctgtgcttttgaa 890
>ref|XM_507572.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0094P23.28 mRNA Length = 1594 Score = 347 bits (175), Expect = 2e-92 Identities = 343/399 (85%) Strand = Plus / Plus Query: 3 actcatattgatgatacagttgatcctgttcgtgatttggaaactattagtcacgaactg 62 ||||||||||||||| |||| ||||||||| | ||||||||||||||| || | || ||| Sbjct: 509 actcatattgatgattcagtggatcctgttagagatttggaaactattggtgaagagctg 568 Query: 63 aggctcaaggatatagagtttgtgcaggctaaaattgatgaccttgagaagtcaatgaag 122 || |||||||| || |||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 569 agactcaaggacattgagtttgtgcagaacaaaattgatgaccttgagaaatcaatgaag 628 Query: 123 aggagcaatgacaagcaacttaagatagaccatgaattatgtcagaggatcatggcacat 182 || |||||||| ||||| || || | || |||||||||||| ||| | ||| || ||| Sbjct: 629 agaagcaatgataagcagctgaaactcgagcatgaattatgtgagaaggtcaaagcccat 688 Query: 183 ctccaagacgggaaagatgtacgtttaggggaatggaaagctgctgaaattgagatcttg 242 || |||| || || ||||| || || || || |||||| |||||| |||||||||||| Sbjct: 689 cttgaagatggaaaggatgtccgctttggagattggaaaagtgctgacattgagatcttg 748 Query: 243 aatacctttcagctgcttactgccaagcccgttgtttatttggtgaacatgagtgaaaag 302 |||||||| ||||| ||||| || ||||| ||||| |||||||||||||||||||| ||| Sbjct: 749 aataccttccagctacttacagctaagccagttgtctatttggtgaacatgagtgagaag 808 Query: 303 gactacctgaggaaaaagaacaagttcctaccaaagatacatgcttgggtgcaagaacat 362 ||||||| |||||||||||||||||||||||| ||||||||||| ||||| || |||||| Sbjct: 809 gactaccagaggaaaaagaacaagttcctacctaagatacatgcctgggttcaggaacat 868 Query: 363 ggtggtgaaactattattcctttcagctgtgcctttgaa 401 ||||||||||||||||||||||| |||||||| |||||| Sbjct: 869 ggtggtgaaactattattccttttagctgtgcttttgaa 907
>ref|XM_507162.2| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0094P23.28 mRNA Length = 1551 Score = 347 bits (175), Expect = 2e-92 Identities = 343/399 (85%) Strand = Plus / Plus Query: 3 actcatattgatgatacagttgatcctgttcgtgatttggaaactattagtcacgaactg 62 ||||||||||||||| |||| ||||||||| | ||||||||||||||| || | || ||| Sbjct: 510 actcatattgatgattcagtggatcctgttagagatttggaaactattggtgaagagctg 569 Query: 63 aggctcaaggatatagagtttgtgcaggctaaaattgatgaccttgagaagtcaatgaag 122 || |||||||| || |||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 570 agactcaaggacattgagtttgtgcagaacaaaattgatgaccttgagaaatcaatgaag 629 Query: 123 aggagcaatgacaagcaacttaagatagaccatgaattatgtcagaggatcatggcacat 182 || |||||||| ||||| || || | || |||||||||||| ||| | ||| || ||| Sbjct: 630 agaagcaatgataagcagctgaaactcgagcatgaattatgtgagaaggtcaaagcccat 689 Query: 183 ctccaagacgggaaagatgtacgtttaggggaatggaaagctgctgaaattgagatcttg 242 || |||| || || ||||| || || || || |||||| |||||| |||||||||||| Sbjct: 690 cttgaagatggaaaggatgtccgctttggagattggaaaagtgctgacattgagatcttg 749 Query: 243 aatacctttcagctgcttactgccaagcccgttgtttatttggtgaacatgagtgaaaag 302 |||||||| ||||| ||||| || ||||| ||||| |||||||||||||||||||| ||| Sbjct: 750 aataccttccagctacttacagctaagccagttgtctatttggtgaacatgagtgagaag 809 Query: 303 gactacctgaggaaaaagaacaagttcctaccaaagatacatgcttgggtgcaagaacat 362 ||||||| |||||||||||||||||||||||| ||||||||||| ||||| || |||||| Sbjct: 810 gactaccagaggaaaaagaacaagttcctacctaagatacatgcctgggttcaggaacat 869 Query: 363 ggtggtgaaactattattcctttcagctgtgcctttgaa 401 ||||||||||||||||||||||| |||||||| |||||| Sbjct: 870 ggtggtgaaactattattccttttagctgtgcttttgaa 908
>dbj|AK121741.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033085L09, full insert sequence Length = 1551 Score = 347 bits (175), Expect = 2e-92 Identities = 343/399 (85%) Strand = Plus / Plus Query: 3 actcatattgatgatacagttgatcctgttcgtgatttggaaactattagtcacgaactg 62 ||||||||||||||| |||| ||||||||| | ||||||||||||||| || | || ||| Sbjct: 510 actcatattgatgattcagtggatcctgttagagatttggaaactattggtgaagagctg 569 Query: 63 aggctcaaggatatagagtttgtgcaggctaaaattgatgaccttgagaagtcaatgaag 122 || |||||||| || |||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 570 agactcaaggacattgagtttgtgcagaacaaaattgatgaccttgagaaatcaatgaag 629 Query: 123 aggagcaatgacaagcaacttaagatagaccatgaattatgtcagaggatcatggcacat 182 || |||||||| ||||| || || | || |||||||||||| ||| | ||| || ||| Sbjct: 630 agaagcaatgataagcagctgaaactcgagcatgaattatgtgagaaggtcaaagcccat 689 Query: 183 ctccaagacgggaaagatgtacgtttaggggaatggaaagctgctgaaattgagatcttg 242 || |||| || || ||||| || || || || |||||| |||||| |||||||||||| Sbjct: 690 cttgaagatggaaaggatgtccgctttggagattggaaaagtgctgacattgagatcttg 749 Query: 243 aatacctttcagctgcttactgccaagcccgttgtttatttggtgaacatgagtgaaaag 302 |||||||| ||||| ||||| || ||||| ||||| |||||||||||||||||||| ||| Sbjct: 750 aataccttccagctacttacagctaagccagttgtctatttggtgaacatgagtgagaag 809 Query: 303 gactacctgaggaaaaagaacaagttcctaccaaagatacatgcttgggtgcaagaacat 362 ||||||| |||||||||||||||||||||||| ||||||||||| ||||| || |||||| Sbjct: 810 gactaccagaggaaaaagaacaagttcctacctaagatacatgcctgggttcaggaacat 869 Query: 363 ggtggtgaaactattattcctttcagctgtgcctttgaa 401 ||||||||||||||||||||||| |||||||| |||||| Sbjct: 870 ggtggtgaaactattattccttttagctgtgcttttgaa 908
>dbj|AK098917.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002L20, full insert sequence Length = 1533 Score = 347 bits (175), Expect = 2e-92 Identities = 343/399 (85%) Strand = Plus / Plus Query: 3 actcatattgatgatacagttgatcctgttcgtgatttggaaactattagtcacgaactg 62 ||||||||||||||| |||| ||||||||| | ||||||||||||||| || | || ||| Sbjct: 492 actcatattgatgattcagtggatcctgttagagatttggaaactattggtgaagagctg 551 Query: 63 aggctcaaggatatagagtttgtgcaggctaaaattgatgaccttgagaagtcaatgaag 122 || |||||||| || |||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 552 agactcaaggacattgagtttgtgcagaacaaaattgatgaccttgagaaatcaatgaag 611 Query: 123 aggagcaatgacaagcaacttaagatagaccatgaattatgtcagaggatcatggcacat 182 || |||||||| ||||| || || | || |||||||||||| ||| | ||| || ||| Sbjct: 612 agaagcaatgataagcagctgaaactcgagcatgaattatgtgagaaggtcaaagcccat 671 Query: 183 ctccaagacgggaaagatgtacgtttaggggaatggaaagctgctgaaattgagatcttg 242 || |||| || || ||||| || || || || |||||| |||||| |||||||||||| Sbjct: 672 cttgaagatggaaaggatgtccgctttggagattggaaaagtgctgacattgagatcttg 731 Query: 243 aatacctttcagctgcttactgccaagcccgttgtttatttggtgaacatgagtgaaaag 302 |||||||| ||||| ||||| || ||||| ||||| |||||||||||||||||||| ||| Sbjct: 732 aataccttccagctacttacagctaagccagttgtctatttggtgaacatgagtgagaag 791 Query: 303 gactacctgaggaaaaagaacaagttcctaccaaagatacatgcttgggtgcaagaacat 362 ||||||| |||||||||||||||||||||||| ||||||||||| ||||| || |||||| Sbjct: 792 gactaccagaggaaaaagaacaagttcctacctaagatacatgcctgggttcaggaacat 851 Query: 363 ggtggtgaaactattattcctttcagctgtgcctttgaa 401 ||||||||||||||||||||||| |||||||| |||||| Sbjct: 852 ggtggtgaaactattattccttttagctgtgcttttgaa 890
>dbj|AK062256.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-G08, full insert sequence Length = 1599 Score = 347 bits (175), Expect = 2e-92 Identities = 343/399 (85%) Strand = Plus / Plus Query: 3 actcatattgatgatacagttgatcctgttcgtgatttggaaactattagtcacgaactg 62 ||||||||||||||| |||| ||||||||| | ||||||||||||||| || | || ||| Sbjct: 514 actcatattgatgattcagtggatcctgttagagatttggaaactattggtgaagagctg 573 Query: 63 aggctcaaggatatagagtttgtgcaggctaaaattgatgaccttgagaagtcaatgaag 122 || |||||||| || |||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 574 agactcaaggacattgagtttgtgcagaacaaaattgatgaccttgagaaatcaatgaag 633 Query: 123 aggagcaatgacaagcaacttaagatagaccatgaattatgtcagaggatcatggcacat 182 || |||||||| ||||| || || | || |||||||||||| ||| | ||| || ||| Sbjct: 634 agaagcaatgataagcagctgaaactcgagcatgaattatgtgagaaggtcaaagcccat 693 Query: 183 ctccaagacgggaaagatgtacgtttaggggaatggaaagctgctgaaattgagatcttg 242 || |||| || || ||||| || || || || |||||| |||||| |||||||||||| Sbjct: 694 cttgaagatggaaaggatgtccgctttggagattggaaaagtgctgacattgagatcttg 753 Query: 243 aatacctttcagctgcttactgccaagcccgttgtttatttggtgaacatgagtgaaaag 302 |||||||| ||||| ||||| || ||||| ||||| |||||||||||||||||||| ||| Sbjct: 754 aataccttccagctacttacagctaagccagttgtctatttggtgaacatgagtgagaag 813 Query: 303 gactacctgaggaaaaagaacaagttcctaccaaagatacatgcttgggtgcaagaacat 362 ||||||| |||||||||||||||||||||||| ||||||||||| ||||| || |||||| Sbjct: 814 gactaccagaggaaaaagaacaagttcctacctaagatacatgcctgggttcaggaacat 873 Query: 363 ggtggtgaaactattattcctttcagctgtgcctttgaa 401 ||||||||||||||||||||||| |||||||| |||||| Sbjct: 874 ggtggtgaaactattattccttttagctgtgcttttgaa 912
>gb|AF108896.1|AF108896 Capsicum annuum GTP-binding protein mRNA, complete cds Length = 1557 Score = 143 bits (72), Expect = 5e-31 Identities = 222/272 (81%) Strand = Plus / Plus Query: 117 atgaagaggagcaatgacaagcaacttaagatagaccatgaattatgtcagaggatcatg 176 |||||||| ||||||||||| ||| | || ||||| |||||||| |||| ||| ||| Sbjct: 532 atgaagagaagcaatgacaaacaattgaaaatagagcatgaattgtgtctaagggtcaaa 591 Query: 177 gcacatctccaagacgggaaagatgtacgtttaggggaatggaaagctgctgaaattgag 236 ||| ||| | || || |||||||| ||||| ||||| ||||||||||| || ||||| Sbjct: 592 gcatcactcgaggaaggcaaagatgttcgtttgggggactggaaagctgcagatattgaa 651 Query: 237 atcttgaatacctttcagctgcttactgccaagcccgttgtttatttggtgaacatgagt 296 | |||||||| || |||||||||||||| || || |||||||| ||||| ||||||| | Sbjct: 652 ttgttgaatactttccagctgcttactgcgaaacctgttgtttacttggttaacatgaat 711 Query: 297 gaaaaggactacctgaggaaaaagaacaagttcctaccaaagatacatgcttgggtgcaa 356 || || ||||| | ||||||||||||||||| | || ||||| ||||| |||||||| Sbjct: 712 gagaaagactatcaaaggaaaaagaacaagtttttgcccaagattcatgcatgggtgcag 771 Query: 357 gaacatggtggtgaaactattattcctttcag 388 || ||||||||||| | ||||||||||||||| Sbjct: 772 gagcatggtggtgacattattattcctttcag 803
>ref|NM_102795.2| Arabidopsis thaliana GTP binding AT1G30580 mRNA, complete cds Length = 1549 Score = 101 bits (51), Expect = 2e-18 Identities = 156/191 (81%) Strand = Plus / Plus Query: 198 gatgtacgtttaggggaatggaaagctgctgaaattgagatcttgaatacctttcagctg 257 ||||| ||||| ||||| |||||| | ||||| || ||||| ||||| || || || || Sbjct: 682 gatgtccgttttggggactggaaaacagctgatatcgagattttgaacactttccaattg 741 Query: 258 cttactgccaagcccgttgtttatttggtgaacatgagtgaaaaggactacctgaggaaa 317 ||| |||| |||||||||||||| ||| | ||| ||| ||| | ||||| | |||||| Sbjct: 742 ctttctgcaaagcccgttgtttacttgattaacctgaatgagagagactatcagaggaag 801 Query: 318 aagaacaagttcctaccaaagatacatgcttgggtgcaagaacatggtggtgaaactatt 377 || ||||||||| | |||||||| ||||| ||||| |||||||| |||||||| ||||| Sbjct: 802 aaaaacaagttcttgccaaagattcatgcctgggttcaagaacacggtggtgatactatg 861 Query: 378 attcctttcag 388 ||||||||||| Sbjct: 862 attcctttcag 872 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Plus Query: 117 atgaagaggagcaatgacaagca 139 ||||||||||||||||||||||| Sbjct: 601 atgaagaggagcaatgacaagca 623
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 101 bits (51), Expect = 2e-18 Identities = 60/63 (95%) Strand = Plus / Plus Query: 284 ggtgaacatgagtgaaaaggactacctgaggaaaaagaacaagttcctaccaaagataca 343 ||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 5743189 ggtgaacatgagtgagaaggactaccagaggaaaaagaacaagttcctacctaagataca 5743248 Query: 344 tgc 346 ||| Sbjct: 5743249 tgc 5743251 Score = 77.8 bits (39), Expect = 3e-11 Identities = 75/87 (86%) Strand = Plus / Plus Query: 78 gagtttgtgcaggctaaaattgatgaccttgagaagtcaatgaagaggagcaatgacaag 137 |||||||||||| |||||||||||||||||||| ||||||||||| |||||||| ||| Sbjct: 5742260 gagtttgtgcagaacaaaattgatgaccttgagaaatcaatgaagagaagcaatgataag 5742319 Query: 138 caacttaagatagaccatgaattatgt 164 || || || | || |||||||||||| Sbjct: 5742320 cagctgaaactcgagcatgaattatgt 5742346 Score = 73.8 bits (37), Expect = 4e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 357 gaacatggtggtgaaactattattcctttcagctgtgcctttgaa 401 ||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 5743349 gaacatggtggtgaaactattattccttttagctgtgcttttgaa 5743393 Score = 69.9 bits (35), Expect = 7e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 224 tgctgaaattgagatcttgaatacctttcagctgcttactgccaagcccgttgtttattt 283 |||||| |||||||||||||||||||| ||||| ||||| || ||||| ||||| ||||| Sbjct: 5742529 tgctgacattgagatcttgaataccttccagctacttacagctaagccagttgtctattt 5742588 Query: 284 ggt 286 ||| Sbjct: 5742589 ggt 5742591 Score = 67.9 bits (34), Expect = 3e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 3 actcatattgatgatacagttgatcctgttcgtgatttggaaactattagtcacgaactg 62 ||||||||||||||| |||| ||||||||| | ||||||||||||||| || | || ||| Sbjct: 5742101 actcatattgatgattcagtggatcctgttagagatttggaaactattggtgaagagctg 5742160 Query: 63 aggctcaagg 72 || ||||||| Sbjct: 5742161 agactcaagg 5742170
>gb|AY085845.1| Arabidopsis thaliana clone 18981 mRNA, complete sequence Length = 1497 Score = 101 bits (51), Expect = 2e-18 Identities = 156/191 (81%) Strand = Plus / Plus Query: 198 gatgtacgtttaggggaatggaaagctgctgaaattgagatcttgaatacctttcagctg 257 ||||| ||||| ||||| |||||| | ||||| || ||||| ||||| || || || || Sbjct: 683 gatgtccgttttggggactggaaaacagctgatatcgagattttgaacactttccaattg 742 Query: 258 cttactgccaagcccgttgtttatttggtgaacatgagtgaaaaggactacctgaggaaa 317 ||| |||| |||||||||||||| ||| | ||| ||| ||| | ||||| | |||||| Sbjct: 743 ctttctgcaaagcccgttgtttacttgattaacctgaatgagagagactatcagaggaag 802 Query: 318 aagaacaagttcctaccaaagatacatgcttgggtgcaagaacatggtggtgaaactatt 377 || ||||||||| | |||||||| ||||| ||||| |||||||| |||||||| ||||| Sbjct: 803 aaaaacaagttcttgccaaagattcatgcctgggttcaagaacacggtggtgatactatg 862 Query: 378 attcctttcag 388 ||||||||||| Sbjct: 863 attcctttcag 873 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Plus Query: 117 atgaagaggagcaatgacaagca 139 ||||||||||||||||||||||| Sbjct: 602 atgaagaggagcaatgacaagca 624
>dbj|AP005416.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0094P23 Length = 149341 Score = 101 bits (51), Expect = 2e-18 Identities = 60/63 (95%) Strand = Plus / Plus Query: 284 ggtgaacatgagtgaaaaggactacctgaggaaaaagaacaagttcctaccaaagataca 343 ||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 97814 ggtgaacatgagtgagaaggactaccagaggaaaaagaacaagttcctacctaagataca 97873 Query: 344 tgc 346 ||| Sbjct: 97874 tgc 97876 Score = 77.8 bits (39), Expect = 3e-11 Identities = 75/87 (86%) Strand = Plus / Plus Query: 78 gagtttgtgcaggctaaaattgatgaccttgagaagtcaatgaagaggagcaatgacaag 137 |||||||||||| |||||||||||||||||||| ||||||||||| |||||||| ||| Sbjct: 96885 gagtttgtgcagaacaaaattgatgaccttgagaaatcaatgaagagaagcaatgataag 96944 Query: 138 caacttaagatagaccatgaattatgt 164 || || || | || |||||||||||| Sbjct: 96945 cagctgaaactcgagcatgaattatgt 96971 Score = 73.8 bits (37), Expect = 4e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 357 gaacatggtggtgaaactattattcctttcagctgtgcctttgaa 401 ||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 97974 gaacatggtggtgaaactattattccttttagctgtgcttttgaa 98018 Score = 69.9 bits (35), Expect = 7e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 224 tgctgaaattgagatcttgaatacctttcagctgcttactgccaagcccgttgtttattt 283 |||||| |||||||||||||||||||| ||||| ||||| || ||||| ||||| ||||| Sbjct: 97154 tgctgacattgagatcttgaataccttccagctacttacagctaagccagttgtctattt 97213 Query: 284 ggt 286 ||| Sbjct: 97214 ggt 97216 Score = 67.9 bits (34), Expect = 3e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 3 actcatattgatgatacagttgatcctgttcgtgatttggaaactattagtcacgaactg 62 ||||||||||||||| |||| ||||||||| | ||||||||||||||| || | || ||| Sbjct: 96726 actcatattgatgattcagtggatcctgttagagatttggaaactattggtgaagagctg 96785 Query: 63 aggctcaagg 72 || ||||||| Sbjct: 96786 agactcaagg 96795
>gb|AC007060.3|T5I8 Arabidopsis thaliana chromosome 1 BAC T5I8 sequence, complete sequence Length = 96183 Score = 54.0 bits (27), Expect = 4e-04 Identities = 75/91 (82%) Strand = Plus / Minus Query: 198 gatgtacgtttaggggaatggaaagctgctgaaattgagatcttgaatacctttcagctg 257 ||||| ||||| ||||| |||||| | ||||| || ||||| ||||| || || || || Sbjct: 9085 gatgtccgttttggggactggaaaacagctgatatcgagattttgaacactttccaattg 9026 Query: 258 cttactgccaagcccgttgtttatttggtga 288 ||| |||| |||||||||||||| ||||||| Sbjct: 9025 ctttctgcaaagcccgttgtttacttggtga 8995 Score = 48.1 bits (24), Expect = 0.024 Identities = 36/40 (90%) Strand = Plus / Minus Query: 349 gggtgcaagaacatggtggtgaaactattattcctttcag 388 |||| |||||||| |||||||| ||||| ||||||||||| Sbjct: 8457 gggttcaagaacacggtggtgatactatgattcctttcag 8418 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Minus Query: 117 atgaagaggagcaatgacaagca 139 ||||||||||||||||||||||| Sbjct: 9265 atgaagaggagcaatgacaagca 9243
>gb|AC136637.3| Mus musculus BAC clone RP24-327G11 from chromosome 18, complete sequence Length = 149724 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 375 attattcctttcagctgtgcctttga 400 |||||||||||||||| ||||||||| Sbjct: 65872 attattcctttcagctctgcctttga 65847
>gb|AC142351.1| Pan troglodytes BAC clone RP43-21J15 from 7, complete sequence Length = 159635 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 375 attattcctttcagctgtgcctttga 400 |||||||||||||||| ||||||||| Sbjct: 118711 attattcctttcagctctgcctttga 118736
>gb|AC103949.6| Homo sapiens chromosome 18, clone RP11-671P2, complete sequence Length = 177301 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 375 attattcctttcagctgtgcctttga 400 |||||||||||||||| ||||||||| Sbjct: 131589 attattcctttcagctctgcctttga 131614
>gb|AC026839.7| Homo sapiens chromosome 5, clone RP11-186B13, complete sequence Length = 156721 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 375 attattcctttcagctgtgcctttga 400 |||||||||||||||| ||||||||| Sbjct: 10934 attattcctttcagctctgcctttga 10909
>dbj|AK043657.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched library, clone:A830015M19 product:inferred: tumor suppressor protein dcc precursor {Mus musculus}, full insert sequence Length = 3575 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 375 attattcctttcagctgtgcctttga 400 |||||||||||||||| ||||||||| Sbjct: 1217 attattcctttcagctctgcctttga 1242
>ref|XM_725044.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY02266) partial mRNA Length = 1356 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 261 actgccaagcccgttgtttatttggtgaacatgagtgaaaa 301 ||||| || |||||||||||||| || || ||||||||||| Sbjct: 829 actgcaaaacccgttgtttatttagttaatatgagtgaaaa 869
>ref|XM_671872.1| Plasmodium berghei strain ANKA GTP-binding protein (PB000680.00.0) partial mRNA Length = 1182 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 261 actgccaagcccgttgtttatttggtgaacatgagtgaaaa 301 ||||| ||||| ||||||||||| || || ||||||||||| Sbjct: 655 actgcaaagccagttgtttatttagttaatatgagtgaaaa 695
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 379 ttcctttcagctgtgcctttg 399 ||||||||||||||||||||| Sbjct: 1462995 ttcctttcagctgtgcctttg 1463015
>emb|Z93387.1|CET02E9 Caenorhabditis elegans Cosmid T02E9, complete sequence Length = 34263 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 acagttgatcctgttcgtgat 38 ||||||||||||||||||||| Sbjct: 1222 acagttgatcctgttcgtgat 1242
>ref|NM_004629.1| Homo sapiens Fanconi anemia, complementation group G (FANCG), mRNA Length = 2649 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 acctgaggaaaaagaacaag 326 |||||||||||||||||||| Sbjct: 1953 acctgaggaaaaagaacaag 1972
>gb|AY795970.1| Homo sapiens Fanconi anemia, complementation group G (FANCG) gene, complete cds Length = 8985 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 acctgaggaaaaagaacaag 326 |||||||||||||||||||| Sbjct: 6217 acctgaggaaaaagaacaag 6236
>gb|AC168275.4| Mus musculus 10 BAC RP23-350O21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 188458 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 acctgaggaaaaagaacaag 326 |||||||||||||||||||| Sbjct: 98942 acctgaggaaaaagaacaag 98961
>gb|BC000032.2| Homo sapiens Fanconi anemia, complementation group G, mRNA (cDNA clone MGC:1899 IMAGE:3507258), complete cds Length = 2296 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 acctgaggaaaaagaacaag 326 |||||||||||||||||||| Sbjct: 1599 acctgaggaaaaagaacaag 1618
>emb|AL953901.15| Zebrafish DNA sequence from clone CH211-207G22 in linkage group 3, complete sequence Length = 196773 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 aaagctgctgaaattgagat 238 |||||||||||||||||||| Sbjct: 2130 aaagctgctgaaattgagat 2149
>emb|CR450718.10| Zebrafish DNA sequence from clone CH211-246I5 in linkage group 3, complete sequence Length = 151291 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 aaagctgctgaaattgagat 238 |||||||||||||||||||| Sbjct: 47109 aaagctgctgaaattgagat 47128
>gb|AC126550.3| Mus musculus BAC clone RP24-405L5 from chromosome 17, complete sequence Length = 171820 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 376 ttattcctttcagctgtgcc 395 |||||||||||||||||||| Sbjct: 93499 ttattcctttcagctgtgcc 93480
>emb|AL356862.10| Human DNA sequence from clone RP11-1M19 on chromosome 9q34.11-34.3 Contains part of the RALGPS1A gene for Ral guanine nucleotide exchange factor RalGPS1A (RALGEF2, KIAA0351) and the ANGPTL2 gene for angiopoietin-like 2 (angiopoietin-related protein 2)(ARP2, HARP), complete sequence Length = 145481 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 269 gcccgttgtttatttggtgaacat 292 |||| ||||||||||||||||||| Sbjct: 101770 gcccattgtttatttggtgaacat 101793
>gb|BT009813.1| Homo sapiens Fanconi anemia, complementation group G mRNA, complete cds Length = 1869 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 acctgaggaaaaagaacaag 326 |||||||||||||||||||| Sbjct: 1461 acctgaggaaaaagaacaag 1480
>emb|AL353795.13| Human DNA sequence from clone RP11-182N22 on chromosome 9 Contains a novel gene, the VCP gene for valosin-containing protein, the FANCG gene for Fanconi anemia, complementation group G (FAG, XRCC9), the gene for phosphatidylinositol glycan class O (PIGO), a novel gene, the STOML2 gene for stomatin (EPB72)-like 2 (SLP-2), a novel gene (KIAA1539) (FLJ11560), a zinc finger protein pseudogene, the 5' end of the UNC13 gene for unc-13-like (C. elegans) (hmunc13) and nine CpG islands, complete sequence Length = 195102 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 acctgaggaaaaagaacaag 326 |||||||||||||||||||| Sbjct: 45015 acctgaggaaaaagaacaag 44996
>emb|AJ007669.1|HSA7669 Homo sapiens mRNA for Fanconi anemia group G Length = 2649 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 acctgaggaaaaagaacaag 326 |||||||||||||||||||| Sbjct: 1953 acctgaggaaaaagaacaag 1972
>emb|CR592637.1| full-length cDNA clone CS0DI063YD13 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1466 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 acctgaggaaaaagaacaag 326 |||||||||||||||||||| Sbjct: 823 acctgaggaaaaagaacaag 842
>gb|AC100868.2| Homo sapiens chromosome 8, clone RP11-246K8, complete sequence Length = 160939 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 156 gaattatgtcagaggatcatggca 179 |||||||| ||||||||||||||| Sbjct: 132985 gaattatggcagaggatcatggca 132962
>gb|AC004472.1|AC004472 Homo sapiens chromosome 9, P1 clone 11659, complete sequence Length = 86765 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 acctgaggaaaaagaacaag 326 |||||||||||||||||||| Sbjct: 55207 acctgaggaaaaagaacaag 55188
>dbj|AK087037.1| Mus musculus 0 day neonate lung cDNA, RIKEN full-length enriched library, clone:E030022E15 product:unclassifiable, full insert sequence Length = 2783 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 376 ttattcctttcagctgtgcc 395 |||||||||||||||||||| Sbjct: 1670 ttattcctttcagctgtgcc 1689
>gb|AC016907.6| Homo sapiens BAC clone RP11-439P4 from 2, complete sequence Length = 202827 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 tatagagtttgtgcaggctaaaat 97 |||||| ||||||||||||||||| Sbjct: 140260 tatagaatttgtgcaggctaaaat 140283
>gb|AY889509.1| Synthetic construct Homo sapiens clone FLH109705.01X Fanconi anemia complementation group G (FANCG) mRNA, complete cds Length = 1869 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 acctgaggaaaaagaacaag 326 |||||||||||||||||||| Sbjct: 1461 acctgaggaaaaagaacaag 1480
>gb|AY889508.1| Synthetic construct Homo sapiens clone FLH109704.01X Fanconi anemia complementation group G (FANCG) mRNA, complete cds Length = 1869 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 acctgaggaaaaagaacaag 326 |||||||||||||||||||| Sbjct: 1461 acctgaggaaaaagaacaag 1480
>gb|AY889507.1| Synthetic construct Homo sapiens clone FLH109701.01X Fanconi anemia complementation group G (FANCG) mRNA, complete cds Length = 1869 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 acctgaggaaaaagaacaag 326 |||||||||||||||||||| Sbjct: 1461 acctgaggaaaaagaacaag 1480
>gb|AY889506.1| Synthetic construct Homo sapiens clone FLH109700.01X Fanconi anemia complementation group G (FANCG) mRNA, complete cds Length = 1869 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 acctgaggaaaaagaacaag 326 |||||||||||||||||||| Sbjct: 1461 acctgaggaaaaagaacaag 1480
>gb|BC011623.2| Homo sapiens Fanconi anemia, complementation group G, mRNA (cDNA clone MGC:10412 IMAGE:4053144), complete cds Length = 2427 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 acctgaggaaaaagaacaag 326 |||||||||||||||||||| Sbjct: 1726 acctgaggaaaaagaacaag 1745
>gb|AC156387.5| Mus musculus 10 BAC RP24-396H15 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 230270 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 acctgaggaaaaagaacaag 326 |||||||||||||||||||| Sbjct: 60783 acctgaggaaaaagaacaag 60802
>emb|AJ719075.1| Nicotiana tabacum cDNA-AFLP-fragment MBT42-215, cultivar Bright Yellow 2 Length = 167 Score = 40.1 bits (20), Expect = 5.9 Identities = 130/167 (77%) Strand = Plus / Plus Query: 119 gaagaggagcaatgacaagcaacttaagatagaccatgaattatgtcagaggatcatggc 178 ||||| |||||||||||| ||| | || ||||| |||||||| | || ||| | ||||| Sbjct: 1 gaagangagcaatgacaaacaattgaaaatagagcatgaattgtctctaagggttatggc 60 Query: 179 acatctccaagacgggaaagatgtacgtttaggggaatggaaagctgctgaaattgagat 238 | ||| | || || |||||| | ||| | ||||| ||||||||||| || |||| | Sbjct: 61 atcactcaaggaaggtaaagatatccgtctgggggactggaaagctgcagatgttgaatt 120 Query: 239 cttgaatacctttcagctgcttactgccaagcccgttgtttatttgg 285 |||||||| || ||| |||||||||| || || |||||||| |||| Sbjct: 121 tttgaatactttccagttgcttactgcaaaaccggttgtttacttgg 167
>gb|U70310.1|HSU70310 Human DNA repair protein XRCC9 (XRCC9) mRNA, complete cds Length = 2290 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 acctgaggaaaaagaacaag 326 |||||||||||||||||||| Sbjct: 1595 acctgaggaaaaagaacaag 1614 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,462,857 Number of Sequences: 3902068 Number of extensions: 4462857 Number of successful extensions: 82954 Number of sequences better than 10.0: 48 Number of HSP's better than 10.0 without gapping: 48 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 82851 Number of HSP's gapped (non-prelim): 96 length of query: 438 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 416 effective length of database: 17,147,199,772 effective search space: 7133235105152 effective search space used: 7133235105152 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)